TCONS_00067146 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00067146
Unique Name	TCONS_00067146
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	5736

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_464:215124..221954+
coding sequence from alignment at scaffold_464:215124..221954+

transcript sequence

>TCONS_00067146 ID=TCONS_00067146|Name=TCONS_00067146|organism=Clytia hemisphaerica|type=transcript|length=5736bp
taatatctttccaatgataccaaatttatgaagactgaagaattccttca
aaagttataggcaaatgaaaaaagagtgcacacttatcgtgaatagactt
tagtttactagtctaatcagtatacagtttactatttacgaagattctat
tcagcgcgcaatcagcGGAGAGAAAAGTAACCACGAAGACAATCCAAGAA
CTTGGATTAGACAATCCAAGAACTTGGATTAAATTCAAAGTtgatacttt
tatttttattaccgtcgttgaaaacacggCTTAAAAAGGTCATCAATgcg
atagagaatcataacataaataTCTGTCTATTCCTTTGATTTCATTAAAG
TAACATAACATtagcaagaagctatctattacgtacggaatctattacgt
gagtttttagACTGGATCCGAGGCGTTTTTGCCTGATTACTAAAGCTTCA
CGGCATAGAGAAAAAAGAGGTTAAGCAAAAAAGGTGATCTATGacgtatg
acgtaatgtttatttttccgtATTTTATTTTCGGCCccaacttttaaaat
tttcttctttttttttcttttccagttttCTTTTTGGTGGTTTGGTCTAT
AAATTCCCCTTAATTCCTCGTATCTGACAGGTGCTCCTTTTTCTGCTTCT
TTGCATTCCAAGGTATCAATATCACCTTTTTAGGACGGGAGATGTCTCTT
TAGAATCAAGCCGAACTTTCTGGAACGTTGAAGTTGACCagtcaataaaa
ttttttcagtAAAGGATTGAGAACTTAAAGCAGTGGCGGTTGTACAGAAG
ATAgagctttatataatttttgggAACGGTTTGAAGTTCAGCGGTTGTGT
GACATCAGGTTCTTAGCAGGCTGATTTGTACGTACAATATATAGGTGATG
ATGAAGAGCTGAAATTGAATCTCGTTGCTTAGTTGTAGCAGTTGAAATTG
GGTGGAATGGTAAATTTATTTGAGCTTGGCAGAGCAGTCTTTTTCGTGTT
TGTTGCTTTGGGTGGGTGACATTATAACTTTGGCTTCTTCGCACTTGATG
GTGGCACCAaagaaacactgaaaaacatgaaaaagaaatatggttacATG
CTGTTCATTGTAATGGTTACTTTGGATGTATTTGGACTTAGAGAGCATat
aaaaagcaagataaaaaagagaagaaaaacaaaaaaaccggAAAGAAACT
Tctatttgttttggtttgataaaaaagtcagcaaagattattttattaca
ggggggggggtttcagggggtacccgattccacaattccgccaatttttt
ctccaatttccgtcaaaccgtcttaaattgaaccaaaattccgtcaccga
aaattcctttgaaattcaacatttttgtcgaaaattccgcaaatttgaat
atcttttaccaattccgaaattccgcaaatttttttgctaaattccgttt
ttccgcactaaaattgtctaattttccgtctccgtcagagaacccaattt
ccgtaattccgtctaaattttcgccaagttccgccactccgtccgaaaaa
agggccaattccgcttgtttacattttttcggGTGATTTTTGATCCTAAA
CGATTCAGCCCAATCTCCGTGAGGTAAATTTCCCGTGGATCATGCTTATA
TTATAATCGATATTACGTGAGATTGGAGAATTTCTCGCAATAGATCTACT
CCCCAAGATACGACGTACAGGTCAAATTTCACGGGACAGAGTTAGCCTAG
AGATTTGGGCTCTAGCCCGCgaaaaactcacgtaatagattccgtacgta
atagatagcttcttgtTTAACCTCGCCATTATCACTAATAGTTTATCAAT
TACTGTTATtgtatacatttgggaatcatgtaaaagatttctttcgaaag
aaactcatttcaattacattcggaggtttctggggaatttgtaaatagta
aactgcatactgatacagtctgctagacattaatatggtaatatttgctc
ttcatctttaattctttctacagtgattagattgacacatgcgcgataaa
atttctgttattggtcttcagaggttgattatattctttgaaaactcatc
ctctgatactcagggtaatttcggttaattttcaagcgccttctgATGTT
TATGAAAATTATGACTATCTGTTATGTATCAGTTTAGGTTGATTCTGCTT
TCTTGTTTATTTGATATattatttttcagaattttaggTTCAAAATTCAA
TCAGTTTGTAAAATGTCGCCGGTTgagaaaaaaggagaaaaaccGGTTAA
GATTACCGCAGAAGAAGCTACGAAGAAATTGAAAGATTTGCAGCCGTGGA
AAATCTCAtcggaaaaatatgacaaacataataatttaaaaacacaaatt
ttaaaTCATGAAGAATTTGTTTCTAGCAaccaagaaaaacagtttccaTA
TCATTTAGGGAACTCAAAACAGGAATCAGACCCGATGAAAGTCATGAAAG
AGCTTCTTGAACGTGATTGGCGTGATTGCTTTTTATTTGATGAATGCAAA
TCCGAAGCAATTTTTTTCCCCTATTGCTACATTTCAAACCAATGCACTGG
TAAACCATCTGGTGCGATTCTTGATAACGGCATTAAGAAACAAATAGAGA
GGCTCTCGAATAATTTAAAAGAACGTCACCCAAAAGATTATTGGTTGACA
CGCGAAGTATCATCTTTCCTTGCTAGTCAACCAAAATCTGATGACATATT
TGACAGTAAGGCATTCGAGAATTGGATACTAAACCTGAAAATTATGTACA
TTATTCGTGGCCTAGCCGGAGCTGACAAGATTGCCTTACCAGAGACAaca
tcaaaaaaattcattgagGATTGTATCAAACGTGTTTCATCACACGAGAC
TTTGTCAGAAATTAAAGACTttcttgaaaatcttgaaaagtgCGAAAAAC
ACAGAAATGCTAAAGAAATTGTAAACGATGAAATAGATTCGTTAAACATT
GATGATTCCAATCTAAACAAGCTTTTTAATTTGGAATTTTCAACTCTTGG
AAAGGATGTCGAGAAATGGTTCCGTGAGCAGCTCGACCCATTGAAGGACG
GAATTCTTAAAGAAGCCGTAATTCTATGCCCGACCATATTTTTCAACGTT
AAAGAGAAAAAACACAGGGAAATGGATTGTTTCATCATTTTGTATAAGCG
TAAATTGATCATTTCAATTGAGATGAAAAGAACAATTTATACCGATAGCG
TGTTTAAGCAAATAGATAGAAACCATCGtctttttgaaaagaaacttGGC
AACCAGTTTTCTTCCGAATGGAACTTTTTTCCAGTCGTATGTGCCAAGTT
CAGCGACGGGATTAATGTCGAAACCAAGCACTTCATAACCATGGAAACCA
AAGTCGACGAATGGTTAGACAATgtattcaaaaagtttaaagaaatcCCA
CAAAATCCAAATCGATCTTCTCgtgatgatttaaaaaaagtactGCAAAT
TTTAGTTTATGCCCTTCATGCATCAAACAAATTTCAGAATTCACAGATAA
CAAGCTCCAACTGGGTTTCGTATGTCACCGGCGCAATTGAAAACATCGCA
ACGCCTGATAATATTTTGTTTTACTCGAAAGAACAATTTGCCATTATGAA
TAATCGTGATTACGATAGGCTGATCATCTCAGCTGGCTGGGGAACTGGAA
AGAGTATCTTGCTGAAACACAAAGCGATACAGTTGAAAAACCATTTCTGC
AAAGGAGAGGAGATTGTTTATATATTAGGAGAAAGACCACTGAGAGATTC
TCATACCCTGTTTTATCATCGAATGAAGGAAGAGTTGGAAGTGAAGCACA
AAATTAAAGTCATGGAGCTTGCCGCAAAAGATGGGAAAAAACCTATTGAC
GTAATCAGAGAACGAAAAACCAAAGGAGCGTTCCTCGACGAGTATCATTT
ACAAAACAATGACCCGTTTTTGAAGGAACTTTCAGCTCTCGTAGATTTCT
TATGGGTGGTTCCTTCTACCAATTCACTACGCGTTTTTCATCatgaattt
ccaaattttgaaaaagaatacaCCGTGCTTCGTCTCGAAACCAACTTTCG
AAACACTAAGAAAATGGTTGTAGACATAAAAAAGAGAGCTTTGGAAAACG
ATTATGGATACAAAGAAGGAATAGTGATGCCACTTGAAAATTCCCCTGAT
GGTCGTGAACCAACAGTTGTCAAAACATTCAAGGATGCAATgcaaaaagc
aaagaaaagcaATCAAGAAGGAACGTGGGGCTCGATTTTAGTAATTGCAA
AACCTTCTTACAACTTATCAGATGACTTACATGGTTTCAAATGGAAATGG
TACAGTACAGATGaaaggaaaaatgatttttcaaaaaataaatctaccGA
CGATTCCGGTGACAATCCTTACACGTTTCTTCTCAAAAATGAAGCTGTTT
TGGTTATCGACGAGCCTTTGTCTCTTGGCTTTGAATGGCCGACTGTAATT
GTATTTGAGAGTATGGAAGCTAATGTTGTTTACCATGATATAAACTATTT
TATGAGATGCCAAACACATCTTATAATTGTGGAGAAACCGAAGAAAGCAG
ATTCTTAGTTTGATTTTATACATAATAATTACATATTAATTACATATTAA
TTAGATTAAATAGCCTCATACTGATTAGGAAGTCCTGGGAAGgatagccc
ggggtccacttaaagcttttttatagactggatggcgcgattaagtggcc
cggtagtatatggtaatatgcttttgcttaggtggactgtaaaacagtcc
gccagatttcgttgtttttgccaggtaaaaaaagaatgaagctatgtctt
tatttgaaaataagggaatcaaattctgttattgatgtttgtttctcgtt
cttaattatatttttcaaattcaagtagctttttttatatttggatttta
aacattcttttttcaaaatggcagccTCGTCAAATgcttctagtctactt
cactggacaaATTATCAAAaggcaaagttcagccagaagtagactctagt
ctatggGAAGGACAAAACACGTGTCAGCGGGTAGATGTATTACGCTCAGA
ACTTCCGTTCATTGAGCACTTTATAGACTCTGTTGAGGAGCAAGCTCTGC
TTCTCCGttcaccacaagcgattatgtGACGCTCAACACTTAGTGTTTTA
AGCACTCTGCTCTGATGACAACAGCAATTTGTGCTCGCTTACCCGAGCCG
CACTGATGAGTCCTGGGGAGGACGAAACATGTGTCTGCGGATAGATACAT
ATaaattaagttttatttttatctgtCATTAAGACTACTTTTTGGCTCTG
GACGTTAAATATAGGCGGGTGGTATCAATCTTCTGCGCTTttagtttaaa
acattttaacgGACGTAAATCGACGTTACACGCAAAATTGCTCGAACGAA
ACATCGGTAAATAACTGACGATAAGTTACTAGTTTGAGgtggtttttttt
tctaaatatacTTCACAAATTTTcgtgtaatattttttgtgaCGAAAGTT
ATCTAGGGTTATTTATAAAACATTAGGATGCTAAATCGAACAAAACAGAG
CTTGAATATGATTGCTGCACATTCATTCTACTTAGCATAAAATGTAATTC
GCTTATTTTACGAAATGATATGTTTTCAGTGTACAAACCTCGAATCCAAA
TGCAATTCTTAGCCGAATCAACTTTTCTTATCAGAC

Run BLAST on NCBI

protein sequence of TCONS_00067146-protein

>TCONS_00067146-protein ID=TCONS_00067146-protein|Name=TCONS_00067146-protein|organism=Clytia hemisphaerica|type=polypeptide|length=781bp
MSPVEKKGEKPVKITAEEATKKLKDLQPWKISSEKYDKHNNLKTQILNHE
EFVSSNQEKQFPYHLGNSKQESDPMKVMKELLERDWRDCFLFDECKSEAI
FFPYCYISNQCTGKPSGAILDNGIKKQIERLSNNLKERHPKDYWLTREVS
SFLASQPKSDDIFDSKAFENWILNLKIMYIIRGLAGADKIALPETTSKKF
IEDCIKRVSSHETLSEIKDFLENLEKCEKHRNAKEIVNDEIDSLNIDDSN
LNKLFNLEFSTLGKDVEKWFREQLDPLKDGILKEAVILCPTIFFNVKEKK
HREMDCFIILYKRKLIISIEMKRTIYTDSVFKQIDRNHRLFEKKLGNQFS
SEWNFFPVVCAKFSDGINVETKHFITMETKVDEWLDNVFKKFKEIPQNPN
RSSRDDLKKVLQILVYALHASNKFQNSQITSSNWVSYVTGAIENIATPDN
ILFYSKEQFAIMNNRDYDRLIISAGWGTGKSILLKHKAIQLKNHFCKGEE
IVYILGERPLRDSHTLFYHRMKEELEVKHKIKVMELAAKDGKKPIDVIRE
RKTKGAFLDEYHLQNNDPFLKELSALVDFLWVVPSTNSLRVFHHEFPNFE
KEYTVLRLETNFRNTKKMVVDIKKRALENDYGYKEGIVMPLENSPDGREP
TVVKTFKDAMQKAKKSNQEGTWGSILVIAKPSYNLSDDLHGFKWKWYSTD
ERKNDFSKNKSTDDSGDNPYTFLLKNEAVLVIDEPLSLGFEWPTVIVFES
MEANVVYHDINYFMRCQTHLIIVEKPKKADS

Run BLAST on NCBI

transcript from alignment at scaffold_464:215124..221954+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00067146 ID=TCONS_00067146|Name=TCONS_00067146|organism=Clytia hemisphaerica|type=transcript|length=6831bp|location=Sequence derived from alignment at scaffold_464:215124..221954+ (Clytia hemisphaerica)
taatatctttccaatgataccaaatttatgaagactgaagaattccttca
aaagttataggcaaatgaaaaaagagtgcacacttatcgtgaatagactt
tagtttactagtctaatcagtatacagtttactatttacgaagattctat
tcagcgcgcaatcagcGGAGAGAAAAGTAACCACGAAGACAATCCAAGAA
CTTGGATTAGACAATCCAAGAACTTGGATTAAATTCAAAGTtgatacttt
tatttttattaccgtcgttgaaaacacggCTTAAAAAGGTCATCAATgcg
atagagaatcataacataaataTCTGTCTATTCCTTTGATTTCATTAAAG
TAACATAACATtagcaagaagctatctattacgtacggaatctattacgt
gagtttttagACTGGATCCGAGGCGTTTTTGCCTGATTACTAAAGCTTCA
CGGCATAGAGAAAAAAGAGGTTAAGCAAAAAAGGTGATCTATGacgtatg
acgtaatgtttatttttccgtATTTTATTTTCGGCCccaacttttaaaat
tttcttctttttttttcttttccagttttCTTTTTGGTGGTTTGGTCTAT
AAATTCCCCTTAATTCCTCGTATCTGACAGGTGCTCCTTTTTCTGCTTCT
TTGCATTCCAAGGTATCAATATCACCTTTTTAGGACGGGAGATGTCTCTT
TAGAATCAAGCCGAACTTTCTGGAACGTTGAAGTTGACCagtcaataaaa
ttttttcagtAAAGGATTGAGAACTTAAAGCAGTGGCGGTTGTACAGAAG
ATAgagctttatataatttttgggAACGGTTTGAAGTTCAGCGGTTGTGT
GACATCAGGTTCTTAGCAGGCTGATTTGTACGTACAATATATAGGTGATG
ATGAAGAGCTGAAATTGAATCTCGTTGCTTAGTTGTAGCAGTTGAAATTG
GGTGGAATGGTAAATTTATTTGAGCTTGGCAGAGCAGTCTTTTTCGTGTT
TGTTGCTTTGGGTGGGTGACATTATAACTTTGGCTTCTTCGCACTTGATG
GTGGCACCAaagaaacactgaaaaacatgaaaaagaaatatggttacATG
CTGTTCATTGTAATGGTTACTTTGGATGTATTTGGACTTAGAGAGCATat
aaaaagcaagataaaaaagagaagaaaaacaaaaaaaccggAAAGAAACT
Tctatttgttttggtttgataaaaaagtcagcaaagattattttattaca
ggggggggggtttcagggggtacccgattccacaattccgccaatttttt
ctccaatttccgtcaaaccgtcttaaattgaaccaaaattccgtcaccga
aaattcctttgaaattcaacatttttgtcgaaaattccgcaaatttgaat
atcttttaccaattccgaaattccgcaaatttttttgctaaattccgttt
ttccgcactaaaattgtctaattttccgtctccgtcagagaacccaattt
ccgtaattccgtctaaattttcgccaagttccgccactccgtccgaaaaa
agggccaattccgcttgtttacattttttcggGTGATTTTTGATCCTAAA
CGATTCAGCCCAATCTCCGTGAGGTAAATTTCCCGTGGATCATGCTTATA
TTATAATCGATATTACGTGAGATTGGAGAATTTCTCGCAATAGATCTACT
CCCCAAGATACGACGTACAGGTCAAATTTCACGGGACAGAGTTAGCCTAG
AGATTTGGGCTCTAGCCCGCgaaaaactcacgtaatagattccgtacgta
atagatagcttcttgtTTAACCTCGCCATTATCACTAATAGTTTATCAAT
TACTGTTATtgtatacatttgggaatcatgtaaaagatttctttcgaaag
aaactcatttcaattacattcggaggtttctggggaatttgtaaatagta
aactgcatactgatacagtctgctagacattaatatggtaatatttgctc
ttcatctttaattctttctacagtgattagattgacacatgcgcgataaa
atttctgttattggtcttcagaggttgattatattctttgaaaactcatc
ctctgatactcagggtaatttcggttaattttcaagcgccttctgATGTT
TATGAAAATTATGACTATCTGTTATGTATCAGTTTAGGTTGATTCTGCTT
TCTTGTTTATTTGATATattatttttcagaattttaggTTCAAAATTCAA
TCAGTTTGTAAAATGTCGCCGGTTgagaaaaaaggagaaaaaccGGTTAA
GATTACCGCAGAAGAAGCTACGAAGAAATTGAAAGATTTGCAGCCGTGGA
AAATCTCAtcggaaaaatatgacaaacataataatttaaaaacacaaatt
ttaaaTCATGAAGAATTTGTTTCTAGCAaccaagaaaaacagtttccaTA
TCATTTAGGGAACTCAAAACAGGAATCAGACCCGATGAAAGTCATGAAAG
AGCTTCTTGAACGTGATTGGCGTGATTGCTTTTTATTTGATGAATGCAAA
TCCGAAGCAATTTTTTTCCCCTATTGCTACATTTCAAACCAATGCACTGG
TAAACCATCTGGTGCGATTCTTGATAACGGCATTAAGAAACAAATAGAGA
GGCTCTCGAATAATTTAAAAGAACGTCACCCAAAAGATTATTGGTTGACA
CGCGAAGTATCATCTTTCCTTGCTAGTCAACCAAAATCTGATGACATATT
TGACAGTAAGGCATTCGAGAATTGGATACTAAACCTGAAAATTATGTACA
TTATTCGTGGCCTAGCCGGAGCTGACAAGATTGCCTTACCAGAGACAaca
tcaaaaaaattcattgagGATTGTATCAAACGTGTTTCATCACACGAGAC
TTTGTCAGAAATTAAAGACTttcttgaaaatcttgaaaagtgCGAAAAAC
ACAGAAATGCTAAAGAAATTGTAAACGATGAAATAGATTCGTTAAACATT
GATGATTCCAATCTAAACAAGCTTTTTAATTTGGAATTTTCAACTCTTGG
AAAGGATGTCGAGAAATGGTTCCGTGAGCAGCTCGACCCATTGAAGGACG
GAATTCTTAAAGAAGCCGTAATTCTATGCCCGACCATATTTTTCAACGTT
AAAGAGAAAAAACACAGGGAAATGGATTGTTTCATCATTTTGTATAAGCG
TAAATTGATCATTTCAATTGAGATGAAAAGAACAATTTATACCGATAGCG
TGTTTAAGCAAATAGATAGAAACCATCGtctttttgaaaagaaacttGGC
AACCAGTTTTCTTCCGAATGGAACTTTTTTCCAGTCGTATGTGCCAAGTT
CAGCGACGGGATTAATGTCGAAACCAAGCACTTCATAACCATGGAAACCA
AAGTCGACGAATGGTTAGACAATgtattcaaaaagtttaaagaaatcCCA
CAAAATCCAAATCGATCTTCTCgtgatgatttaaaaaaagtactGCAAAT
TTTAGTTTATGCCCTTCATGCATCAAACAAATTTCAGAATTCACAGATAA
CAAGCTCCAACTGGGTTTCGTATGTCACCGGCGCAATTGAAAACATCGCA
ACGCCTGATAATATTTTGTTTTACTCGAAAGAACAATTTGCCATTATGAA
TAATCGTGATTACGATAGGCTGATCATCTCAGCTGGCTGGGGAACTGGAA
AGAGTATCTTGCTGAAACACAAAGCGATACAGTTGAAAAACCATTTCTGC
AAAGGAGAGGAGATTGTTTATATATTAGGAGAAAGACCACTGAGAGATTC
TCATACCCTGTTTTATCATCGAATGAAGGAAGAGTTGGAAGTGAAGCACA
AAATTAAAGTCATGGAGCTTGCCGCAAAAGTAAGTTTCCTGTAGTTTAAG
CCTACAGTAAAGTATGCAACATGGGTCGTCTCACCATCATTCACGACAAA
TAAGCCTATTCCATAGGATTCGTGCCTCTGTTATACATGCTgcattttct
attcaatttacgGTTgtcccggaaaaaaagtatcgataaaaaaagtgaaa
acttaaaatttaatgttattcattatttgacgtttcggtgtcttctTTGC
ACCATGGCCACAAGACAAGTATAGTAAAATAACGttcaataaaataaatt
caaaacgaacttcaatttacaacattcaaaaaatcacaaaattaaaaatt
actaCCAAATTTCACATAGGAACGCATACATCTTAAAAGAGCTCAAGGGG
GGTGAATGATCAGCATTTCTTTTATATAAAGCTCTTCATggtaattaaaa
ttaaatttttagttttcacttttttttatcaaatttatctgGCCCAGCAA
AAAAAGAAGTATCGAGTTCAAACATGATTCTGACTAGGTTTTtgctatag
aagtggtacgataCTTGATACTTTTTTTCAAGACACCCTGTACAGGAGGG
AGAATGCAAGAatacttgaaaatttcacttcaaGAAAGAAggttttttgt
cacttttctaTTGATTTAGGAACTCAAGAACAAACTGTTTGGGCGCGTTC
ACACTGCGACACTGGAAGGTTTCCTTAGTAAAACTGTAgttgtaaaatat
tttatgttttacaaTAGAAGCGTGCACACAACAATACCTCAGATTTCCTC
TTGATGTCATCCAGCTTAAAGATGATACAAAGTTTAATAAAggcattaaa
aaaatttttgtggatAAAGGAATTCGTGAGGTCTGTCGCTGAGGTTCACA
AAATGCACTGCTTGGaactcttttttaaattttctactttttacaTGAGC
TTTACTGGGGGACAATTGGCAATTTACAATACAGTTAAAAATCACTAaaa
tggtattcttaggttcTCTTGCCTAATCCATCATGGTGCTATTTCaagca
tattcttatttttttgaccaatttcatcatgaatattcttataaaaaagc
atgtacCTTTTTGTTATTACTCAGGATGGGAAAAAACCTATTGACGTAAT
CAGAGAACGAAAAACCAAAGGAGCGTTCCTCGACGAGTATCATTTACAAA
ACAATGACCCGTTTTTGAAGGAACTTTCAGCTCTCGTAGATTTCTTATGG
GTGGTTCCTTCTACCAATTCACTACGCGTTTTTCATCatgaatttccaaa
ttttgaaaaagaatacaCCGTGCTTCGTCTCGAAACCAACTTTCGAAACA
CTAAGAAAATGGTTGTAGACATAAAAAAGAGAGCTTTGGAAAACGATTAT
GGATACAAAGAAGGAATAGTGATGCCACTTGAAAATTCCCCTGATGGTCG
TGAACCAACAGTTGTCAAAACATTCAAGGATGCAATgcaaaaagcaaaga
aaagcaATCAAGAAGGAACGTGGGGCTCGATTTTAGTAATTGCAAAACCT
TCTTACAACTTATCAGATGACTTACATGGTTTCAAATGGAAATGGTACAG
TACAGATGaaaggaaaaatgatttttcaaaaaataaatctaccGACGATT
CCGGTGACAATCCTTACACGTTTCTTCTCAAAAATGAAGCTGTTTTGGTT
ATCGACGAGCCTTTGTCTCTTGGCTTTGAATGGCCGACTGTAATTGTATT
TGAGAGTATGGAAGCTAATGTTGTTTACCATGATATAAACTATTTTATGA
GATGCCAAACACATCTTATAATTGTGGAGAAACCGAAGAAAGCAGATTCT
TAGTTTGATTTTATACATAATAATTACATATTAATTACATATTAATTAGA
TTAAATAGCCTCATACTGATTAGGAAGTCCTGGGAAGgatagcccggggt
ccacttaaagcttttttatagactggatggcgcgattaagtggcccggta
gtatatggtaatatgcttttgcttaggtggactgtaaaacagtccgccag
atttcgttgtttttgccaggtaaaaaaagaatgaagctatgtctttattt
gaaaataagggaatcaaattctgttattgatgtttgtttctcgttcttaa
ttatatttttcaaattcaagtagctttttttatatttggattttaaacat
tcttttttcaaaatggcagccTCGTCAAATgcttctagtctacttcactg
gacaaATTATCAAAaggcaaagttcagccagaagtagactctagtctatg
gGAAGGACAAAACACGTGTCAGCGGGTAGATGTATTACGCTCAGAACTTC
CGTTCATTGAGCACTTTATAGACTCTGTTGAGGAGCAAGCTCTGCTTCTC
CGttcaccacaagcgattatgtGACGCTCAACACTTAGTGTTTTAAGCAC
TCTGCTCTGATGACAACAGCAATTTGTGCTCGCTTACCCGAGCCGCACTG
ATGAGTCCTGGGGAGGACGAAACATGTGTCTGCGGATAGATACATATaaa
ttaagttttatttttatctgtCATTAAGACTACTTTTTGGCTCTGGACGT
TAAATATAGGCGGGTGGTATCAATCTTCTGCGCTTttagtttaaaacatt
ttaacgGACGTAAATCGACGTTACACGCAAAATTGCTCGAACGAAACATC
GGTAAATAACTGACGATAAGTTACTAGTTTGAGgtggtttttttttctaa
atatacTTCACAAATTTTcgtgtaatattttttgtgaCGAAAGTTATCTA
GGGTTATTTATAAAACATTAGGATGCTAAATCGAACAAAACAGAGCTTGA
ATATGATTGCTGCACATTCATTCTACTTAGCATAAAATGTAATTCGCTTA
TTTTACGAAATGATATGTTTTCAGTGTACAAACCTCGAATCCAAATGCAA
TTCTTAGCCGAATCAACTTTTCTTATCAGAC

Coding sequence (CDS) from alignment at scaffold_464:215124..221954+

>TCONS_00067146 ID=TCONS_00067146|Name=TCONS_00067146|organism=Clytia hemisphaerica|type=CDS|length=4692bp|location=Sequence derived from alignment at scaffold_464:215124..221954+ (Clytia hemisphaerica)
ATGTCGCCGGTTgagaaaaaaggagaaaaaccGGTTAAGATTACCGCAGA
AGAAGCTACGAAGAAATTGAAAGATTTGCAGCCGTGGAAAATCTCAtcgg
aaaaatatgacaaacataataatttaaaaacacaaattttaaaTCATGAA
GAATTTGTTTCTAGCAaccaagaaaaacagtttccaTATCATTTAGGGAA
CTCAAAACAGGAATCAGACCCGATGAAAGTCATGAAAGAGCTTCTTGAAC
GTGATTGGCGTGATTGCTTTTTATTTGATGAATGCAAATCCGAAGCAATT
TTTTTCCCCTATTGCTACATTTCAAACCAATGCACTGGTAAACCATCTGG
TGCGATTCTTGATAACGGCATTAAGAAACAAATAGAGAGGCTCTCGAATA
ATTTAAAAGAACGTCACCCAAAAGATTATTGGTTGACACGCGAAGTATCA
TCTTTCCTTGCTAGTCAACCAAAATCTGATGACATATTTGACAGTAAGGC
ATTCGAGAATTGGATACTAAACCTGAAAATTATGTACATTATTCGTGGCC
TAGCCGGAGCTGACAAGATTGCCTTACCAGAGACAacatcaaaaaaattc
attgagGATTGTATCAAACGTGTTTCATCACACGAGACTTTGTCAGAAAT
TAAAGACTttcttgaaaatcttgaaaagtgCGAAAAACACAGAAATGCTA
AAGAAATTGTAAACGATGAAATAGATTCGTTAAACATTGATGATTCCAAT
CTAAACAAGCTTTTTAATTTGGAATTTTCAACTCTTGGAAAGGATGTCGA
GAAATGGTTCCGTGAGCAGCTCGACCCATTGAAGGACGGAATTCTTAAAG
AAGCCGTAATTCTATGCCCGACCATATTTTTCAACGTTAAAGAGAAAAAA
CACAGGGAAATGGATTGTTTCATCATTTTGTATAAGCGTAAATTGATCAT
TTCAATTGAGATGAAAAGAACAATTTATACCGATAGCGTGTTTAAGCAAA
TAGATAGAAACCATCGtctttttgaaaagaaacttGGCAACCAGTTTTCT
TCCGAATGGAACTTTTTTCCAGTCGTATGTGCCAAGTTCAGCGACGGGAT
TAATGTCGAAACCAAGCACTTCATAACCATGGAAACCAAAGTCGACGAAT
GGTTAGACAATgtattcaaaaagtttaaagaaatcCCACAAAATCCAAAT
CGATCTTCTCgtgatgatttaaaaaaagtactGCAAATTTTAGTTTATGC
CCTTCATGCATCAAACAAATTTCAGAATTCACAGATAACAAGCTCCAACT
GGGTTTCGTATGTCACCGGCGCAATTGAAAACATCGCAACGCCTGATAAT
ATTTTGTTTTACTCGAAAGAACAATTTGCCATTATGAATAATCGTGATTA
CGATAGGCTGATCATCTCAGCTGGCTGGGGAACTGGAAAGAGTATCTTGC
TGAAACACAAAGCGATACAGTTGAAAAACCATTTCTGCAAAGGAGAGGAG
ATTGTTTATATATTAGGAGAAAGACCACTGAGAGATTCTCATACCCTGTT
TTATCATCGAATGAAGGAAGAGTTGGAAGTGAAGCACAAAATTAAAGTCA
TGGAGCTTGCCGCAAAAGATGGGAAAAAACCTATTGACGTAATCAGAGAA
CGAAAAACCAAAGGAGCGTTCCTCGACGAGTATCATTTACAAAACAATGA
CCCGTTTTTGAAGGAACTTTCAGCTCTCGTAGATTTCTTATGGGTGGTTC
CTTCTACCAATTCACTACGCGTTTTTCATCatgaatttccaaattttgaa
aaagaatacaCCGTGCTTCGTCTCGAAACCAACTTTCGAAACACTAAGAA
AATGGTTGTAGACATAAAAAAGAGAGCTTTGGAAAACGATTATGGATACA
AAGAAGGAATAGTGATGCCACTTGAAAATTCCCCTGATGGTCGTGAACCA
ACAGTTGTCAAAACATTCAAGGATGCAATgcaaaaagcaaagaaaagcaA
TCAAGAAGGAACGTGGGGCTCGATTTTAGTAATTGCAAAACCTTCTTACA
ACTTATCAGATGACTTACATGGTTTCAAATGGAAATGGTACAGTACAGAT
GaaaggaaaaatgatttttcaaaaaataaatctaccGACGATTCCGGTGA
CAATCCTTACACGTTTCTTCTCAAAAATGAAGCTGTTTTGGTTATCGACG
AGCCTTTGTCTCTTGGCTTTGAATGGCCGACTGTAATTGTATTTGAGAGT
ATGGAAGCTAATGTTGTTTACCATGATATAAACTATTTTATGAGATGCCA
AACACATCTTATAATTGTGGAGAAACCGAAGAAAGCAGATTCTTAGATGT
CGCCGGTTgagaaaaaaggagaaaaaccGGTTAAGATTACCGCAGAAGAA
GCTACGAAGAAATTGAAAGATTTGCAGCCGTGGAAAATCTCAtcggaaaa
atatgacaaacataataatttaaaaacacaaattttaaaTCATGAAGAAT
TTGTTTCTAGCAaccaagaaaaacagtttccaTATCATTTAGGGAACTCA
AAACAGGAATCAGACCCGATGAAAGTCATGAAAGAGCTTCTTGAACGTGA
TTGGCGTGATTGCTTTTTATTTGATGAATGCAAATCCGAAGCAATTTTTT
TCCCCTATTGCTACATTTCAAACCAATGCACTGGTAAACCATCTGGTGCG
ATTCTTGATAACGGCATTAAGAAACAAATAGAGAGGCTCTCGAATAATTT
AAAAGAACGTCACCCAAAAGATTATTGGTTGACACGCGAAGTATCATCTT
TCCTTGCTAGTCAACCAAAATCTGATGACATATTTGACAGTAAGGCATTC
GAGAATTGGATACTAAACCTGAAAATTATGTACATTATTCGTGGCCTAGC
CGGAGCTGACAAGATTGCCTTACCAGAGACAacatcaaaaaaattcattg
agGATTGTATCAAACGTGTTTCATCACACGAGACTTTGTCAGAAATTAAA
GACTttcttgaaaatcttgaaaagtgCGAAAAACACAGAAATGCTAAAGA
AATTGTAAACGATGAAATAGATTCGTTAAACATTGATGATTCCAATCTAA
ACAAGCTTTTTAATTTGGAATTTTCAACTCTTGGAAAGGATGTCGAGAAA
TGGTTCCGTGAGCAGCTCGACCCATTGAAGGACGGAATTCTTAAAGAAGC
CGTAATTCTATGCCCGACCATATTTTTCAACGTTAAAGAGAAAAAACACA
GGGAAATGGATTGTTTCATCATTTTGTATAAGCGTAAATTGATCATTTCA
ATTGAGATGAAAAGAACAATTTATACCGATAGCGTGTTTAAGCAAATAGA
TAGAAACCATCGtctttttgaaaagaaacttGGCAACCAGTTTTCTTCCG
AATGGAACTTTTTTCCAGTCGTATGTGCCAAGTTCAGCGACGGGATTAAT
GTCGAAACCAAGCACTTCATAACCATGGAAACCAAAGTCGACGAATGGTT
AGACAATgtattcaaaaagtttaaagaaatcCCACAAAATCCAAATCGAT
CTTCTCgtgatgatttaaaaaaagtactGCAAATTTTAGTTTATGCCCTT
CATGCATCAAACAAATTTCAGAATTCACAGATAACAAGCTCCAACTGGGT
TTCGTATGTCACCGGCGCAATTGAAAACATCGCAACGCCTGATAATATTT
TGTTTTACTCGAAAGAACAATTTGCCATTATGAATAATCGTGATTACGAT
AGGCTGATCATCTCAGCTGGCTGGGGAACTGGAAAGAGTATCTTGCTGAA
ACACAAAGCGATACAGTTGAAAAACCATTTCTGCAAAGGAGAGGAGATTG
TTTATATATTAGGAGAAAGACCACTGAGAGATTCTCATACCCTGTTTTAT
CATCGAATGAAGGAAGAGTTGGAAGTGAAGCACAAAATTAAAGTCATGGA
GCTTGCCGCAAAAGATGGGAAAAAACCTATTGACGTAATCAGAGAACGAA
AAACCAAAGGAGCGTTCCTCGACGAGTATCATTTACAAAACAATGACCCG
TTTTTGAAGGAACTTTCAGCTCTCGTAGATTTCTTATGGGTGGTTCCTTC
TACCAATTCACTACGCGTTTTTCATCatgaatttccaaattttgaaaaag
aatacaCCGTGCTTCGTCTCGAAACCAACTTTCGAAACACTAAGAAAATG
GTTGTAGACATAAAAAAGAGAGCTTTGGAAAACGATTATGGATACAAAGA
AGGAATAGTGATGCCACTTGAAAATTCCCCTGATGGTCGTGAACCAACAG
TTGTCAAAACATTCAAGGATGCAATgcaaaaagcaaagaaaagcaATCAA
GAAGGAACGTGGGGCTCGATTTTAGTAATTGCAAAACCTTCTTACAACTT
ATCAGATGACTTACATGGTTTCAAATGGAAATGGTACAGTACAGATGaaa
ggaaaaatgatttttcaaaaaataaatctaccGACGATTCCGGTGACAAT
CCTTACACGTTTCTTCTCAAAAATGAAGCTGTTTTGGTTATCGACGAGCC
TTTGTCTCTTGGCTTTGAATGGCCGACTGTAATTGTATTTGAGAGTATGG
AAGCTAATGTTGTTTACCATGATATAAACTATTTTATGAGATGCCAAACA
CATCTTATAATTGTGGAGAAACCGAAGAAAGCAGATTCTTAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041951	XLOC_041951	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00067146-protein	TCONS_00067146-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00067146-exon-scaffold_464-1491911889:215124..219002	TCONS_00067146-exon-scaffold_464-1491911889:215124..219002	Clytia hemisphaerica	exon
TCONS_00067146-exon-scaffold_464-1510915933:215124..219002	TCONS_00067146-exon-scaffold_464-1510915933:215124..219002	Clytia hemisphaerica	exon
TCONS_00067146-exon-scaffold_464-1575043694:215124..219002	TCONS_00067146-exon-scaffold_464-1575043694:215124..219002	Clytia hemisphaerica	exon
TCONS_00067146-exon-scaffold_464-1491911889:220098..221954	TCONS_00067146-exon-scaffold_464-1491911889:220098..221954	Clytia hemisphaerica	exon
TCONS_00067146-exon-scaffold_464-1510915933:220098..221954	TCONS_00067146-exon-scaffold_464-1510915933:220098..221954	Clytia hemisphaerica	exon
TCONS_00067146-exon-scaffold_464-1575043694:220098..221954	TCONS_00067146-exon-scaffold_464-1575043694:220098..221954	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_464	supercontig	scaffold_464:215124..221954 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.389927	0.282692	0.437202	0.544831	0.776711	0.667971	1.85651	2.04921	1.52338	1.60421	3.07507	1.48195	4.58948	4.64245	1.55341	2.08949	1.08241	1.36429	2.75966	2.91536	1.13351	1.11522	0.773716	0.936561	6.87667	7.17469	1.45073	1.23113	0.595352	0.458906

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00067146 vs. Swiss-Prot (Human)

BLAST of TCONS_00067146 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00067146 (transcript) - C. hemisphaerica