TCONS_00067142 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067142
Unique NameTCONS_00067142
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3682

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067142 ID=TCONS_00067142|Name=TCONS_00067142|organism=Clytia hemisphaerica|type=transcript|length=3682bp
TAAATATTTActgtaaaaagaagaaaaattgaaaatattgtcaTTGCAGT
TAAAGGTTAAAGTAGTTGGAATTGGGAGGATTTTAGAGAACAAACTAAAA
TTTCAGCGACAAAGATTTTAAGTCCAAAGACTTCAAAGTCATCTGTATAT
TGAaacataaatattttgaaaggatACACAATATAGTGGAGCTTTTTAGT
CATATTGGTGTTCATAGCTGGGTTGTTTTGGTTGGTcccacaaacttttt
gatttaaaactGAAAGACATTCATTATGacgaattttgttttgttttgaa
ccAACTGGGATAATTTTCACAAAGCAACAAAACATGAAAGCTGTTTGAAA
AAGAGTTGGATCAGAGCAAAAGATTTTGATTACAATTTGTCTTTCAGTCT
TACACTTAGCCATAAATTTCTGTTTATTGGAAACGTTCGTTGGTTCAAGG
AGTGAGAGCTTTTGACTCTATGGTGTTTATTTGGTTGAGAAAGCTATTTG
GAAAATTAATTTAAGAATCATTTGAATCGCAATGGAATATCTTTGATATA
AAATCAGTCGCACAAAAGCATACAGTGGAAAGTTTGTACCAGTAGTTCGg
tttaaaacaagaaaattattAACCTAAAGGAAGCTAAGGGAGCTCCTTTT
TAAAGAGTTTATCCAATCCAAAATAGACAGAGCAGATATCTATAAATACA
GTAGTagaaattaatcaaaatggAGCAGTATTTTCAACGTCGACAAAAAA
CGAAACCGAACAACAAcaatagtgaaaataaagagaaCTCGTTACTTTCA
CATATCTCGAGaccattttccttcaaagacTATTTTTCACATAAACCCTC
ACCCTCATCAAATGGGAGGATTAAATTTAATGATTCAAGAGCTAAAAGTC
AATTCGTGGCTTCACCCAATGCTTACAAATTATGTCCAAGACCAAAAAGg
aacaccAGTATGCTTGCTAAATCAGCATCCACTACTAAGCTTTCAGCATG
CTTCATTTGTGGTCAAGAAATCCCTCTCTCGGAACTCACAACACACGAAA
AAGCATGCTTAGACACCATCAAGGCTAATGATACACAATACACGAGACAA
TCTGGGGACGACGGTTCATCAGATCACTCCTTCCCGACGGCTTATTCTAA
TCTCTCAACCCATTCTTCTTCGAGTGGCGATTCTGCCGGTACCGAAAAGA
AGTATTCGCAATGCTATATTTGTGGAACGGATGTCCCAAGTTATTTAGCC
TCTATTCACGAGAAGAATTGCAAAAAGAGCTGGGAAACAGGGCTACTAAA
TTCGATTTGTACACCAGCTCGAAAGAGTAAGTCAAAAACTGATGTTTCAA
CGCTTTCAAGAAGCTCAAGCCGTGATAACATTTTACAAAAGCAAAATGAC
TTTTCCTTATCAACGCCAAATCTCACGAAAGCCAAATCTACTACCAACTT
ACAGAATGCCAAAATGACGCCGACAAAAAGCGACAAACCACGTCATTTAC
GATCAAACGGACGTAAAAGTACGTCACCTATGTCTCGGTCAACGACAAAT
TTATCGACGAAAACGACTTCTAAAGATTCGTTACTCTCATCTACCGAAAA
CCTTTCGAAGTCATCTCAAGATGTTCGGGATGTTACCGATGCACCGAAAC
GCCGGAACACCGGAGATCCGCAATACGTCATTTGTCAAATCTGCGGAAAA
CTGTATAGTAAGCATTCGATCAGTATACATCAGAGGAGTTGCGAAAAAAC
GTATCAAAAGCAAAAGAGCGTGGGTACAAATGTAGACTATAAAGTCAAAA
GTCGTTCACTTGTTGATCTAACAAAAACCAATAGCCGGCGAACACCAATC
CCGACTTCAAAACCGAAATCGGAAAGGAGACCTGCGTCGGCTAATCcgat
aaataaaatcaaaacgaACTCTTTATCTAGGAGTACGGGAAACTTAGCTC
CAACTTCAACATATAGACGCCGATTATTAACATCCAATAAAAAGACAGTC
GTAAATGGTGAAACAACAAATGAGTCATCAATGGCAAGCCCAATAAGTAA
AAGTGAAATTGACATATCAACTACGTCGCCCGGATTACGTAAATGTTATT
TATGTCGTCAGTTATACGGTACACGCTCGTTACCCATTCACGAAAAACAG
TGTCTCAAAAAATGGGAGCTAGCACAAGAAGAAGAGCACAAGCAACGGAA
ATCGAACGCGCGGGCGGCCAAACAACAAGACATACAAGTATCATCATTCG
GACGAACAAAATTCGAAGAGGAAAATGGGTTAAATTCGAAAACTGAGTCG
GATCAAGAAGAGGATTACGATTTAGAATCAACCACTATTCAAAAGCCGAT
CATATCTCCATCAAAGATGTTTGGTGTCCCCTCGCCATTAAAGAAAGGCT
TCATTGGCCCCGATACTGATGACTCGTTAGACGAGACCGATGGTAAGGCC
AGTACCCTTGATACTGATAAGGACAATGGGAAAGTTTTAACGAACGGAGA
ATCAGGACCTGAAAGACGTAAATCTGGGAGCGGACCTAAATTCGTTGTCT
GTATTTATTGTTCAAAACAATTTGGTCAACACTCAATCTCTATTCATGAG
AAAAGTTGCCGAGAGAAAATGAAAgtcgaaacaaaaacaaaagaaagaat
ggCCACacaatctaaaataaaaaataataaaaaactcaGCCAAAGTGTTG
GTGATATGACACTTTCTGACGCTTTTGATGTGACCACGAATGATATGTTA
CAATTGGTGAAATGTAATNTGACGCTTTTGGTGTGACCACGAATGATATG
TTACAATTGGTGAAATGTAATGAATGtttaaggaaatttttgaaatcaga
CATCGAGAAACATAAAATACATTGCCGTGTATCTGTACTTTAAAACTTAC
AGCGCGTCCGGAAGAAAAGAGGACAGAATTTATATAACGTGGAATCCTCA
taatttatataataatatcatGACTTTATTATTCAATTTCTTTCCCATCA
AAACCTATTAAAACTATATTGGAAATTGAGTATAATGTTGCCCGTGTGCA
TTAGGTTTAGACATTCTAGGGCGAAATTATTTTGCcgtatttttgacaaa
atctaCTGGATACCAAACTTTCTTATTTCTGCTTTTCTAATTTTATAGGA
TCATTTCGAAATACTAGAAAGTTATTCTTTTGGttagaagtttttttcaa
taaataatAACCGGGCGAAGCAATTCGTTTTTCGCGTAGTCCATATTTTG
TTGTACAGTTAGCTCCTGCTAGTTTGGAATCtgatttgttcgaattaaaa
gataaattcgaattatagagagtattttacgAGGATTTCCCTTAAAGGGG
aattatttgttcgaattatagaaagtttcgaattatggaagttcgaatta
gggagGGTCCACTCTATTTGTTTTTTACCTGGACAGTATTTTGGTTGTGT
TTGTTTTccaattttagggaaaatttgACACTCCTTGTTGTGAAAGGATA
ATATTGACATagattttgtttacaaaaatcatTAAGAATTATTATTAGCA
ATTAATTGTTATTTTACTGTTTATTTATTGgtatttcattcaaattttac
aaattggtAGATTATAGTTTCGTTTTGTAATGTGTTTTTGGAAGAAAATA
AACGATATCTTTCTctaaataaagaacttttt
Run BLAST on NCBI

protein sequence of TCONS_00067142-protein

>TCONS_00067142-protein ID=TCONS_00067142-protein|Name=TCONS_00067142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=688bp
MEQYFQRRQKTKPNNNNSENKENSLLSHISRPFSFKDYFSHKPSPSSNGR
IKFNDSRAKSQFVASPNAYKLCPRPKRNTSMLAKSASTTKLSACFICGQE
IPLSELTTHEKACLDTIKANDTQYTRQSGDDGSSDHSFPTAYSNLSTHSS
SSGDSAGTEKKYSQCYICGTDVPSYLASIHEKNCKKSWETGLLNSICTPA
RKSKSKTDVSTLSRSSSRDNILQKQNDFSLSTPNLTKAKSTTNLQNAKMT
PTKSDKPRHLRSNGRKSTSPMSRSTTNLSTKTTSKDSLLSSTENLSKSSQ
DVRDVTDAPKRRNTGDPQYVICQICGKLYSKHSISIHQRSCEKTYQKQKS
VGTNVDYKVKSRSLVDLTKTNSRRTPIPTSKPKSERRPASANPINKIKTN
SLSRSTGNLAPTSTYRRRLLTSNKKTVVNGETTNESSMASPISKSEIDIS
TTSPGLRKCYLCRQLYGTRSLPIHEKQCLKKWELAQEEEHKQRKSNARAA
KQQDIQVSSFGRTKFEEENGLNSKTESDQEEDYDLESTTIQKPIISPSKM
FGVPSPLKKGFIGPDTDDSLDETDGKASTLDTDKDNGKVLTNGESGPERR
KSGSGPKFVVCIYCSKQFGQHSISIHEKSCREKMKVETKTKERMATQSKI
KNNKKLSQSVGDMTLSDAFDVTTNDMLQLVKCNXTLLV
Run BLAST on NCBI

transcript from alignment at scaffold_464:192885..202512+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067142 ID=TCONS_00067142|Name=TCONS_00067142|organism=Clytia hemisphaerica|type=transcript|length=9628bp|location=Sequence derived from alignment at scaffold_464:192885..202512+ (Clytia hemisphaerica)
TAAATATTTActgtaaaaagaagaaaaattgaaaatattgtcaTTGCAGT TAAAGGTTAAAGTAGTTGGAATTGGGAGGATTTTAGAGAACAAACTAAAA TTTCAGCGACAAAGATTTTAAGTCCAAAGACTTCAAAGTCATCTGTATAT TGAaacataaatattttgaaaggatACACAATATAGTGGAGCTTTTTAGT CATATTGGTGTTCATAGCTGGGTTGTTTTGGTTGGTcccacaaacttttt gatttaaaactGAAAGACATTCATTATGacgaattttgttttgttttgaa ccAACTGGGATAATTTTCACAAAGCAACAAAACATGAAAGCTGTTTGAAA AAGAGTTGGATCAGAGCAAAAGATTTTGATTACAATTTGTCTTTCAGTCT TACACTTAGCCATAAATTTCTGTTTATTGGAAACGTTCGTTGGTTCAAGG AGTGAGAGCTTTTGACTCTATGGTGTTTATTTGGTTGAGAAAGCTATTTG GAAAATTAATTTAAGAATCATTTGAATCGCAATGGAATATCTTTGATATA AAATCAGTCGCACAAAAGCATACAGTGGAAAGTTTGTACCAGTAGTTCGg tttaaaacaagaaaattattAACCTAAAGGAAGCTAAGGGAGCTCCTTTT TAAAGAGTTTATCCAATCCAAAATAGACAGAGCAGATATCTATAAATACA GTAGTagaaattaatcaaaatggAGCAGTATTTTCAACGTCGACAAAAAA CGAAACCGAACAACAAcaatagtgaaaataaagagaaCTCGTTACTTTCA CATATCTCGAGaccattttccttcaaagacTATTTTTCACATAAACCCTC ACCCTCATCAAATGGGAGGATTAAATTTAATGATTCAAGAGCTAAAAGTC AATTCGTGGCTTCACCCAATGCTTACAAATTATGTCCAAGACCAAAAAGG TAAGAAACTTGATAAAGACTATTTTCGAGATtattcacccctgtctcact gatcCGGTAAACCAGTTTATNGGACcattttcgaaaagaatagACTTCTT CTTATCACCCCCTGTCTCGCTGCTCCGGTGAGCCAGTTTCAATACAATAA AGGAGATACTATACGGTTGAGGTATATGGCAGACTGTCGACTAGTGACAT CCCAAAATCTAGTAGGAATTTATTGTTCAGTGTTCAGAGTTGTTTTCAAA ATGGTAAAGGTAAACAAGGGATAActgttttttgactttttcaataaTGA GTAGAGAGGCCCCGCGAGGTCGCACGGGGTCTATCATATACAGGGGTATC TCATTTTACTACAGTGGAAactttataattcgaactttattattcgaatt tttattatgcgaatttttcaattcgaataattcaaacGCAAGTATTAGCT CCCTCAGCTGGGGAGTCGTATAAactactctctgtaattcgaatatttct ataattcgaagaaaatttttaatcccTCAGaatagagagagtcaactgta ataCCACAGTATTTGATACTCCAATCCATTCTCTACATCCTTAAATCAAG AATTTACTAACGTGACCAGTCTTCGTCCGAGCATTCCAAGGAATTAATTT TAGATCATGAAATGTAAGCCTCTTCAATAGTTACATTTTCGAAAACTTCA TCGTGTAAATCACaccttaaaaataacaaatgtttctcatatttttttct ctttacattttcaaccttttcgtcttaaatatttcttttcttcaCTTATT CACACATAAACCCCTTCTAATAAAAATTTTCACTCTtgaattttaagttt gtatGAATAAGCAAGCTCGATATTTGCAAACTGAAATTAGAAAGTATTAC TTTGAGATATAAGCATGAAGTTGTGATATTACTTTTCGCTTGTAATAAAG ATATATATATACTGCAATTTGatttgagagacttttttttgAGGTGCAAT TTTTTGAATGTTATGAGGAAATAATTCCGATATTTGCGGCTAAGAAACGA TTGATATTATCGtatattaaattattttctacaaaaatacaaCTACTGGT CGTTTTTATGAGTAACAATTGTTCATGAGAGTTAGAAATTTATTAAAGTT TGCAAAGTAATGATTTGATTTGGGCAAAAAACAAGATGTCTAAAACACCT GGTAAAGCAAGAAACTACAACTACTCAAGGTACGTTTTATGGTGGTCTCG GTgcagcccagctggcacacaacgttgttcaacgttcatctgacgttata atggacgttatgaacgttagataaacgttgaaaaaacattgtgtgccagc tgggagtggagtctctataattcgagactctataactcgaatatctcctt TACTTGAACAAGGTTTCTCTGTCGCCCAGTCAAtgatagcgagtttatgt attttcacttttgaggacggtaaagtgactgaagcgatNaaattcaaaag ttagtctctgaaagggtcccaaaatcacgaaaatcaaaaatttctctctc aaaaggtcacgatttccaaaaattttgatcaaaatttggtgaaaatcaaa ccaaaatttggaaaaaatggaccaaaatttaggaaaaagtctctcaaagg gtctcaaaataaccaaaattttgtctctcaaagggttgattttcgatttt cggctcggacatacccgtcacctcgcaaacctagtaccccccggggtctc ggtacagtggagtctccataactcgagacTCTATACCTCGAATATCTCCT TTacttgaacaagttttctcTGTCATCCAGTTAACGATGTCTcttaaacc ttactccataacttgaaatttacttaactcgaacaagtttgcgCTTCCCG TTCTTGCTATAGTTATGGAGTTTGTTGGGATACAGCGTGTTCAGAAAAAG CGAACCAGACTTTGTATAACAAAAATTCCTTCAATTTTACGACGTTTTAC GCAGAATCCTCTTTTGAATTACTTTTGGATCTTTGTGAGAAAATGATTCt tacttacacgttttttataagaacatccaaaacttttgagtttttagccT CGAAGAGTttttaaagtgtttttcttacattttataAGTATTTTTCTTTG GGTGATTTCCTAATAAAACACGCGTTTAGAGTCCATAAAAATATTGTTCT TAGcttgctcttaatattttggccatcattGAAGACTTGTTATTttaaca aattaaatttttgaattaaagTTGACCTCAACATTTCAAAGCTTGCATCT TGgtccaaatttctaaaaattcgaAAACTCAAGCAAGTTTGGTTAGTCAA TTTGgggtactttaggcgtacaaattttcgcgagcagaaacttttgcgag gtcgaaaaatcacGAAATGTTTGACATTTACTTTCGTGAATTTgagggaa aaatgtttttcgcgagcataaactttcgcgaattgcccttttaagaattt tcaaagacatttactttcgcgaaaagggccgaaattcgcgaaaagggcca aaattcgcgaaaatcgcgaaagtttctgctcgcgaaagtttgtacgccta aagtatatcTAGTTTGATTCACAAACTTTTACTTTCTATCTATATAGGGG AACCTCTTCATTAGAGAATGAGAAGAAGAAGCCTAGAAACCCTCTTTTAA ACAACTCCGAATTTTATTCTTTGGAGTAGCACGAAGTTGTAAATCAATTA GGGATAGTAGTATGGCTGGCGAGTATGAATCACAGTGTTGTTATTCAATG AGAATGGACCTTCAGGGGTATACTGACTGTACATGGtccccactgggacc ccttcctaCTGGAATAATTGGCCAGAATTTTGTCCCCTGTGGAaaattat tctcaaatttttgtccccactgaaaataatcaaataaaccaatcctcact gcaaaatattatactATTTTACCCATTCCAACTAAATTTTcttacttgaa aacaaaagaattgaaatctgcAGTAATAAAAAgtatgagaatatcaatcc ccatggAATTTCAGTCCGTCATTTCATGGATTGAGTTTTGTCTAGTACAA ATGGAACAGGGGAGTGGATTAATGACATTATAATAGTATGACCTAATGAC GCTgacctaattttttttcgaggGAGGTCTTTTTCAAAAGACTGGAGGAT TCAGAACTTATATTCTACGATTACTAGCGCTCGTAGAAAGAGATTTGTCG GGTAGCGACAAGCCGCCAGGTCATTTTGCaacaaattttctttatatGTT TATGTTCGGCAAAcaataaaagcaaaaaatgaaAGCTTTGCAAACAAGAT CTTTAAAATGTCATGGACACAAGCACAACCCTTATAAGTCGTTTCAAAGA TGTTTCACAAACGTCACTATAACCACTGCGGTGAAGAGTAATTTATAATG ATTAGCAGACCAAATATGTACACAAAACGCTCCTCCCCTTTTGTGGTTTT AACTAAAAACGTAAACGATAAGATTCATAATGACGTCATGACTATCCTCT CTAAGATATTGGTTATAGATTCTTAATGTCTATCTAAACAAGACAGATTT GTAGCTTAATTTGGTGACACCATTATAAGTGCAAACGTCAATAGTCAATA AAACTGAATGTACTTAAAATGAGGAAAATGCTTGTCTATATAAACATCAC GTACAACAGTCAGTAGTATTACATTTTGATTAAGACATTTACTTGACTGG TCTATCACTATATAAATCGCAGGATCGCAgatgaaattttacatttttgg gCAGACAatattattgattttttgaGTTCACTTGAATAATACAAGGCTTT TCTAAAGGTGTGATCCAATTAGCCTCTGGCCGTTACAAGTCAAAAACACA TTGGTGGTTTGATAGTAAATTTTGACAAGATTATTTCGTTTCATTGGATT GTCAAAGTGAGATCAGCAGATCACTATGGATACTTCGACGCCATTTATGA TTGAAACATATCTGGAATCGTTCAGGTATATTGAAGATCTTAGTATGTAA TTCTGAGCAGAAAGAATAAATAAACACCAGATGTTATCTCCATTGCAGAG AatgtaaaggcgggaaaatacaTATGCAATAGTTTACAGCCGTAATGGCA GTATACAAAAAAACGGCGGTAGAGTTTCAATGAAACGAGACTGAGAATGC GAAAGACTGGCAAACTAtaccggctgtaaactcttttcggcaagaAAACT TGATTGGGAATTTTCtccggctttgggcttttttcttagataaaaACACT TTGTCCTAGGCTATAGCAAAGCCTAGTTAATTCGTAAGGATAATTTTGGA AACATACCTTATTTAAACAgtatttctgaaaaatattttgaaagcttTCA CAAAGAATTCACGAATTCCCAAAGGGTGAAATCAACAATGGTATTCTGGT TTTCGAGATGAGCCCCTGGTTCAttataagttaagaaaattttcggtatt tcggaatatTACCAGAATGTTAACTACAGTTTTCTGTTATCTTTTAATAT CCAGTCTTGCTTGATTAATCCGGTATTGCTTGAATCCTATTGGTGCTGGT AATCCAATATGTtgtgaatacacgttttttttataagaatatccaaaatt tttgaagcctttcgatgttcttaactttttgagtttcaagacTGAAAATA TCCTTTACATAtccttattttcaccattttgtgagtaatcTTCTCTACTT CAttaagaaatttggtgttttagagcccacaaagccttaaaatgttctta acttgttcttgttcttattttggctatcgaagccttatattacttatata gtttgttcttataaaaatgtgtatgaAATTAATACTGGTCTCCCTGTGCA CCCTCCCAACGCCCTCCCTTCTCCATACTTATAATATGCTAACAAATACA AGAAATTATGTTATGAAGCTGAGATGACTTTTTTTTGGGGAAAAGCAATT GATAAAGACAGTGAAATCAAatatttattcttttttataggaacaccAGT ATGCTTGCTAAATCAGCATCCACTACTAAGCTTTCAGCATGCTTCATTTG TGGTCAAGAAATCCCTCTCTCGGAACTCACAACACACGAAAAAGCATGCT TAGACACCATCAAGGCTAATGATACACAATACACGAGACAATCTGGGGAC GACGGTTCATCAGATCACTCCTTCCCGACGGCTTATTCTAATCTCTCAAC CCATTCTTCTTCGAGTGGCGATTCTGCCGGTACCGAAAAGAAGTATTCGC AATGCTATATTTGTGGAACGGATGTCCCAAGTTATTTAGCCTCTATTCAC GAGAAGAATTGCAAAAAGAGCTGGGAAACAGGGCTACTAAATTCGATTTG TACACCAGCTCGAAAGAGTAAGTCAAAAAGTAAGTGAAACTTCTACTCTA CCTAAGTCGGAAAGTTTTCGAAACATttattggtccagcgcgcagcagaa tggacctttaaaaagcaactgattgaaaagattttgtctttgtcggggcc tgtgcgcgcaataaattaacaagtccaggNATCAAAAACTGTCAAAACTT AGCAATataaagaaagtgtcaaagtgtcaaagaataaaAGCTCAGAGTAG AGGATGGGAAGGAAACTTTTTTGCGTCTtttaaggaacccggtacgaacg acattcggttattgccacgtcagctggaccttcacgccgctccggcttct tgtttatttttgccccgctttaaatgaaaatcttataCAAAGAATTACGT GTTATAATTCAAATCCTTCAATCATTTGTAAAAAGATCAGTTTTTCCGAT GTATCGAAgtaacttttgaaaattctgaTGATCATCATTTGACGTGTTGA AGTAGATCGGTATTCTTTCAGCTGCGGTCTGAGTCAATTTAGGAGCTCCA CTTGTCACCGCTATTTGCCAGAGAGGCATACGAgcctttggtatgacccg gccagCGGCGCACCGTAGCCAGATGTTCTACCTTTATGTTACAAATTGCT AAGAAATAGATTGGcacagtctgttcctctaaagaacCCTGCATTGTAGC ACGcgtgcgtaatttgtcgttctttaaaccaTATGTAGATAATTCCTGTG ATAAACAAATAAGAAGATTTCGTAGGGGTTGACAAACCAACCGGGTCGGG GTTGTGGAGGgcgaaatttgtcgtttttaTAAAATGtgttgttctttttg tctacttttagtaaatgtaggattctttagataaacccacTCGGCATCAT AAATTATATCATGTTCCATTCTCTTTGTTTTCAGCTGATGTTTCAACGCT TTCAAGAAGCTCAAGCCGTGATAACATTTTACAAAAGCAAAATGACTTTT CCTTATCAACGCCAAATCTCACGAAAGCCAAATCTACTACCAACTTACAG AATGCCAAAATGACGCCGACAAAAAGCGACAAACCACGTCATTTACGATC AAACGGACGTAAAAGTACGTCACCTATGTCTCGGTCAACGACAAATTTAT CGACGAAAACGACTTCTAAAGATTCGTTACTCTCATCTACCGAAAACCTT TCGAAGTCATCTCAAGATGTTCGGGATGTTACCGATGCACCGAAACGCCG GAACACCGGAGATCCGCAATACGTCATTTGTCAAATCTGCGGAAAACTGT ATAGTAAGCATTCGATCAGTATACATCAGAGGAGTTGCGAAAAAACGTAT CAAAAGCAAAAGAGCGTGGGTACAAATGTAGACTATAAAGTCAAAAGTCG TTCACTTGTTGATCTAACAAAAACCAATAGCCGGCGAACACCAATCCCGA CTTCAAAACCGAAATCGGAAAGGAGACCTGCGTCGGCTAATCcgataaat aaaatcaaaacgaACTCTTTATCTAGGAGTACGGGAAACTTAGCTCCAAC TTCAACATATAGACGCCGATTATTAACATCCAATAAAAAGACAGTCGTAA ATGGTGAAACAACAAATGAGTCATCAATGGCAAGCCCAATAAGTAAAAGT GAAATTGACATATCAACTACGTCGCCCGGATTACGTAAATGTTATTTATG TCGTCAGTTATACGGTACACGCTCGTTACCCATTCACGAAAAACAGTGTC TCAAAAAATGGGAGCTAGCACAAGAAGAAGAGCACAAGCAACGGAAATCG AACGCGCGGGCGGCCAAACAACAAGACATACAAGTATCATCATTCGGACG AACAAAATTCGAAGAGGAAAATGGGTTAAATTCGAAAACTGAGTCGGATC AAGAAGAGGATTACGATTTAGAATCAACCACTATTCAAAAGCCGATCATA TCTCCATCAAAGATGTTTGGTGTCCCCTCGCCATTAAAGAAAGGCTTCAT TGGCCCCGATACTGATGACTCGTTAGACGAGACCGATGGTAAGGCCAGTA CCCTTGATACTGATAAGGACAATGGGAAAGTTTTAACGAACGGAGAATCA GGACCTGAAAGACGTAAATCTGGGAGCGGACCTAAATTCGTTGTCTGTAT TTATTGTTCAAAACAATTTGGTCAACACTCAATCTCTATTCATGAGAAAA GTTGCCGAGAGAAAATGAAAgtcgaaacaaaaacaaaagaaagaatggCC ACacaatctaaaataaaaaataataaaaaactcaGCCAAAGTGTTGGTGA TATGACACTTTCTGACGCTTTTGATGTGACCACGAATGATATGTTACAAT TGGTGAAATGTAATNTGACGCTTTTGGTGTGACCACGAATGATATGTTAC AATTGGTGAAATGTAATGAATGtttaaggaaatttttgaaatcagaCATC GAGAAACATAAAATACATTGCCGTGTATCTGTACTTTAAAACTTACAGCG CGTCCGGAAGAAAAGAGGACAGAATTTATATAACGTGGAATCCTCAtaat ttatataataatatcatGACTTTATTATTCAATTTCTTTCCCATCAAAAC CTATTAAAACTATATTGGAAATTGAGTATAATGTTGCCCGTGTGCATTAG GTTTAGACATTCTAGGGCGAAATTATTTTGCcgtatttttgacaaaatct aCTGGATACCAAACTTTCTTATTTCTGCTTTTCTAATTTTATAGGATCAT TTCGAAATACTAGAAAGTTATTCTTTTGGttagaagtttttttcaataaa taatAACCGGGCGAAGCAATTCGTTTTTCGCGTAGTCCATATTTTGTTGT ACAGTTAGCTCCTGCTAGTTTGGAATCtgatttgttcgaattaaaagata aattcgaattatagagagtattttacgAGGATTTCCCTTAAAGGGGaatt atttgttcgaattatagaaagtttcgaattatggaagttcgaattaggga gGGTCCACTCTATTTGTTTTTTACCTGGACAGTATTTTGGTTGTGTTTGT TTTccaattttagggaaaatttgACACTCCTTGTTGTGAAAGGATAATAT TGACATagattttgtttacaaaaatcatTAAGAATTATTATTAGCAATTA ATTGTTATTTTACTGTTTATTTATTGgtatttcattcaaattttacaaat tggtAGATTATAGTTTCGTTTTGTAATGTGTTTTTGGAAGAAAATAAACG ATATCTTTCTctaaataaagaacttttt

Coding sequence (CDS) from alignment at scaffold_464:192885..202512+

>TCONS_00067142 ID=TCONS_00067142|Name=TCONS_00067142|organism=Clytia hemisphaerica|type=CDS|length=6201bp|location=Sequence derived from alignment at scaffold_464:192885..202512+ (Clytia hemisphaerica)
atggAGCAGTATTTTCAACGTCGACAAAAAACGAAACCGAACAACAAcaa
tagtgaaaataaagagaaCTCGTTACTTTCACATATCTCGAGaccatttt
ccttcaaagacTATTTTTCACATAAACCCTCACCCTCATCAAATGGGAGG
ATTAAATTTAATGATTCAAGAGCTAAAAGTCAATTCGTGGCTTCACCCAA
TGCTTACAAATTATGTCCAAGACCAAAAAGgaacaccAGTATGCTTGCTA
AATCAGCATCCACTACTAAGCTTTCAGCATGCTTCATTTGTGGTCAAGAA
ATCCCTCTCTCGGAACTCACAACACACGAAAAAGCATGCTTAGACACCAT
CAAGGCTAATGATACACAATACACGAGACAATCTGGGGACGACGGTTCAT
CAGATCACTCCTTCCCGACGGCTTATTCTAATCTCTCAACCCATTCTTCT
TCGAGTGGCGATTCTGCCGGTACCGAAAAGAAGTATTCGCAATGCTATAT
TTGTGGAACGGATGTCCCAAGTTATTTAGCCTCTATTCACGAGAAGAATT
GCAAAAAGAGCTGGGAAACAGGGCTACTAAATTCGATTTGTACACCAGCT
CGAAAGAGTAAGTCAAAAACTGATGTTTCAACGCTTTCAAGAAGCTCAAG
CCGTGATAACATTTTACAAAAGCAAAATGACTTTTCCTTATCAACGCCAA
ATCTCACGAAAGCCAAATCTACTACCAACTTACAGAATGCCAAAATGACG
CCGACAAAAAGCGACAAACCACGTCATTTACGATCAAACGGACGTAAAAG
TACGTCACCTATGTCTCGGTCAACGACAAATTTATCGACGAAAACGACTT
CTAAAGATTCGTTACTCTCATCTACCGAAAACCTTTCGAAGTCATCTCAA
GATGTTCGGGATGTTACCGATGCACCGAAACGCCGGAACACCGGAGATCC
GCAATACGTCATTTGTCAAATCTGCGGAAAACTGTATAGTAAGCATTCGA
TCAGTATACATCAGAGGAGTTGCGAAAAAACGTATCAAAAGCAAAAGAGC
GTGGGTACAAATGTAGACTATAAAGTCAAAAGTCGTTCACTTGTTGATCT
AACAAAAACCAATAGCCGGCGAACACCAATCCCGACTTCAAAACCGAAAT
CGGAAAGGAGACCTGCGTCGGCTAATCcgataaataaaatcaaaacgaAC
TCTTTATCTAGGAGTACGGGAAACTTAGCTCCAACTTCAACATATAGACG
CCGATTATTAACATCCAATAAAAAGACAGTCGTAAATGGTGAAACAACAA
ATGAGTCATCAATGGCAAGCCCAATAAGTAAAAGTGAAATTGACATATCA
ACTACGTCGCCCGGATTACGTAAATGTTATTTATGTCGTCAGTTATACGG
TACACGCTCGTTACCCATTCACGAAAAACAGTGTCTCAAAAAATGGGAGC
TAGCACAAGAAGAAGAGCACAAGCAACGGAAATCGAACGCGCGGGCGGCC
AAACAACAAGACATACAAGTATCATCATTCGGACGAACAAAATTCGAAGA
GGAAAATGGGTTAAATTCGAAAACTGAGTCGGATCAAGAAGAGGATTACG
ATTTAGAATCAACCACTATTCAAAAGCCGATCATATCTCCATCAAAGATG
TTTGGTGTCCCCTCGCCATTAAAGAAAGGCTTCATTGGCCCCGATACTGA
TGACTCGTTAGACGAGACCGATGGTAAGGCCAGTACCCTTGATACTGATA
AGGACAATGGGAAAGTTTTAACGAACGGAGAATCAGGACCTGAAAGACGT
AAATCTGGGAGCGGACCTAAATTCGTTGTCTGTATTTATTGTTCAAAACA
ATTTGGTCAACACTCAATCTCTATTCATGAGAAAAGTTGCCGAGAGAAAA
TGAAAgtcgaaacaaaaacaaaagaaagaatggCCACacaatctaaaata
aaaaataataaaaaactcaGCCAAAGTGTTGGTGATATGACACTTTCTGA
CGCTTTTGATGTGACCACGAATGATATGTTACAATTGGTGAAATGTAATN
TGACGCTTTTGGTGTGAatggAGCAGTATTTTCAACGTCGACAAAAAACG
AAACCGAACAACAAcaatagtgaaaataaagagaaCTCGTTACTTTCACA
TATCTCGAGaccattttccttcaaagacTATTTTTCACATAAACCCTCAC
CCTCATCAAATGGGAGGATTAAATTTAATGATTCAAGAGCTAAAAGTCAA
TTCGTGGCTTCACCCAATGCTTACAAATTATGTCCAAGACCAAAAAGgaa
caccAGTATGCTTGCTAAATCAGCATCCACTACTAAGCTTTCAGCATGCT
TCATTTGTGGTCAAGAAATCCCTCTCTCGGAACTCACAACACACGAAAAA
GCATGCTTAGACACCATCAAGGCTAATGATACACAATACACGAGACAATC
TGGGGACGACGGTTCATCAGATCACTCCTTCCCGACGGCTTATTCTAATC
TCTCAACCCATTCTTCTTCGAGTGGCGATTCTGCCGGTACCGAAAAGAAG
TATTCGCAATGCTATATTTGTGGAACGGATGTCCCAAGTTATTTAGCCTC
TATTCACGAGAAGAATTGCAAAAAGAGCTGGGAAACAGGGCTACTAAATT
CGATTTGTACACCAGCTCGAAAGAGTAAGTCAAAAACTGATGTTTCAACG
CTTTCAAGAAGCTCAAGCCGTGATAACATTTTACAAAAGCAAAATGACTT
TTCCTTATCAACGCCAAATCTCACGAAAGCCAAATCTACTACCAACTTAC
AGAATGCCAAAATGACGCCGACAAAAAGCGACAAACCACGTCATTTACGA
TCAAACGGACGTAAAAGTACGTCACCTATGTCTCGGTCAACGACAAATTT
ATCGACGAAAACGACTTCTAAAGATTCGTTACTCTCATCTACCGAAAACC
TTTCGAAGTCATCTCAAGATGTTCGGGATGTTACCGATGCACCGAAACGC
CGGAACACCGGAGATCCGCAATACGTCATTTGTCAAATCTGCGGAAAACT
GTATAGTAAGCATTCGATCAGTATACATCAGAGGAGTTGCGAAAAAACGT
ATCAAAAGCAAAAGAGCGTGGGTACAAATGTAGACTATAAAGTCAAAAGT
CGTTCACTTGTTGATCTAACAAAAACCAATAGCCGGCGAACACCAATCCC
GACTTCAAAACCGAAATCGGAAAGGAGACCTGCGTCGGCTAATCcgataa
ataaaatcaaaacgaACTCTTTATCTAGGAGTACGGGAAACTTAGCTCCA
ACTTCAACATATAGACGCCGATTATTAACATCCAATAAAAAGACAGTCGT
AAATGGTGAAACAACAAATGAGTCATCAATGGCAAGCCCAATAAGTAAAA
GTGAAATTGACATATCAACTACGTCGCCCGGATTACGTAAATGTTATTTA
TGTCGTCAGTTATACGGTACACGCTCGTTACCCATTCACGAAAAACAGTG
TCTCAAAAAATGGGAGCTAGCACAAGAAGAAGAGCACAAGCAACGGAAAT
CGAACGCGCGGGCGGCCAAACAACAAGACATACAAGTATCATCATTCGGA
CGAACAAAATTCGAAGAGGAAAATGGGTTAAATTCGAAAACTGAGTCGGA
TCAAGAAGAGGATTACGATTTAGAATCAACCACTATTCAAAAGCCGATCA
TATCTCCATCAAAGATGTTTGGTGTCCCCTCGCCATTAAAGAAAGGCTTC
ATTGGCCCCGATACTGATGACTCGTTAGACGAGACCGATGGTAAGGCCAG
TACCCTTGATACTGATAAGGACAATGGGAAAGTTTTAACGAACGGAGAAT
CAGGACCTGAAAGACGTAAATCTGGGAGCGGACCTAAATTCGTTGTCTGT
ATTTATTGTTCAAAACAATTTGGTCAACACTCAATCTCTATTCATGAGAA
AAGTTGCCGAGAGAAAATGAAAgtcgaaacaaaaacaaaagaaagaatgg
CCACacaatctaaaataaaaaataataaaaaactcaGCCAAAGTGTTGGT
GATATGACACTTTCTGACGCTTTTGATGTGACCACGAATGATATGTTACA
ATTGGTGAAATGTAATNTGACGCTTTTGGTGTGAatggAGCAGTATTTTC
AACGTCGACAAAAAACGAAACCGAACAACAAcaatagtgaaaataaagag
aaCTCGTTACTTTCACATATCTCGAGaccattttccttcaaagacTATTT
TTCACATAAACCCTCACCCTCATCAAATGGGAGGATTAAATTTAATGATT
CAAGAGCTAAAAGTCAATTCGTGGCTTCACCCAATGCTTACAAATTATGT
CCAAGACCAAAAAGgaacaccAGTATGCTTGCTAAATCAGCATCCACTAC
TAAGCTTTCAGCATGCTTCATTTGTGGTCAAGAAATCCCTCTCTCGGAAC
TCACAACACACGAAAAAGCATGCTTAGACACCATCAAGGCTAATGATACA
CAATACACGAGACAATCTGGGGACGACGGTTCATCAGATCACTCCTTCCC
GACGGCTTATTCTAATCTCTCAACCCATTCTTCTTCGAGTGGCGATTCTG
CCGGTACCGAAAAGAAGTATTCGCAATGCTATATTTGTGGAACGGATGTC
CCAAGTTATTTAGCCTCTATTCACGAGAAGAATTGCAAAAAGAGCTGGGA
AACAGGGCTACTAAATTCGATTTGTACACCAGCTCGAAAGAGTAAGTCAA
AAACTGATGTTTCAACGCTTTCAAGAAGCTCAAGCCGTGATAACATTTTA
CAAAAGCAAAATGACTTTTCCTTATCAACGCCAAATCTCACGAAAGCCAA
ATCTACTACCAACTTACAGAATGCCAAAATGACGCCGACAAAAAGCGACA
AACCACGTCATTTACGATCAAACGGACGTAAAAGTACGTCACCTATGTCT
CGGTCAACGACAAATTTATCGACGAAAACGACTTCTAAAGATTCGTTACT
CTCATCTACCGAAAACCTTTCGAAGTCATCTCAAGATGTTCGGGATGTTA
CCGATGCACCGAAACGCCGGAACACCGGAGATCCGCAATACGTCATTTGT
CAAATCTGCGGAAAACTGTATAGTAAGCATTCGATCAGTATACATCAGAG
GAGTTGCGAAAAAACGTATCAAAAGCAAAAGAGCGTGGGTACAAATGTAG
ACTATAAAGTCAAAAGTCGTTCACTTGTTGATCTAACAAAAACCAATAGC
CGGCGAACACCAATCCCGACTTCAAAACCGAAATCGGAAAGGAGACCTGC
GTCGGCTAATCcgataaataaaatcaaaacgaACTCTTTATCTAGGAGTA
CGGGAAACTTAGCTCCAACTTCAACATATAGACGCCGATTATTAACATCC
AATAAAAAGACAGTCGTAAATGGTGAAACAACAAATGAGTCATCAATGGC
AAGCCCAATAAGTAAAAGTGAAATTGACATATCAACTACGTCGCCCGGAT
TACGTAAATGTTATTTATGTCGTCAGTTATACGGTACACGCTCGTTACCC
ATTCACGAAAAACAGTGTCTCAAAAAATGGGAGCTAGCACAAGAAGAAGA
GCACAAGCAACGGAAATCGAACGCGCGGGCGGCCAAACAACAAGACATAC
AAGTATCATCATTCGGACGAACAAAATTCGAAGAGGAAAATGGGTTAAAT
TCGAAAACTGAGTCGGATCAAGAAGAGGATTACGATTTAGAATCAACCAC
TATTCAAAAGCCGATCATATCTCCATCAAAGATGTTTGGTGTCCCCTCGC
CATTAAAGAAAGGCTTCATTGGCCCCGATACTGATGACTCGTTAGACGAG
ACCGATGGTAAGGCCAGTACCCTTGATACTGATAAGGACAATGGGAAAGT
TTTAACGAACGGAGAATCAGGACCTGAAAGACGTAAATCTGGGAGCGGAC
CTAAATTCGTTGTCTGTATTTATTGTTCAAAACAATTTGGTCAACACTCA
ATCTCTATTCATGAGAAAAGTTGCCGAGAGAAAATGAAAgtcgaaacaaa
aacaaaagaaagaatggCCACacaatctaaaataaaaaataataaaaaac
tcaGCCAAAGTGTTGGTGATATGACACTTTCTGACGCTTTTGATGTGACC
ACGAATGATATGTTACAATTGGTGAAATGTAATNTGACGCTTTTGGTGTG
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041950XLOC_041950Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067142-proteinTCONS_00067142-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067142-exon-scaffold_464-1491911889:192885..193833TCONS_00067142-exon-scaffold_464-1491911889:192885..193833Clytia hemisphaericaexon
TCONS_00067142-exon-scaffold_464-1510915933:192885..193833TCONS_00067142-exon-scaffold_464-1510915933:192885..193833Clytia hemisphaericaexon
TCONS_00067142-exon-scaffold_464-1575043694:192885..193833TCONS_00067142-exon-scaffold_464-1575043694:192885..193833Clytia hemisphaericaexon
TCONS_00067142-exon-scaffold_464-1491911889:198875..199263TCONS_00067142-exon-scaffold_464-1491911889:198875..199263Clytia hemisphaericaexon
TCONS_00067142-exon-scaffold_464-1510915933:198875..199263TCONS_00067142-exon-scaffold_464-1510915933:198875..199263Clytia hemisphaericaexon
TCONS_00067142-exon-scaffold_464-1575043694:198875..199263TCONS_00067142-exon-scaffold_464-1575043694:198875..199263Clytia hemisphaericaexon
TCONS_00067142-exon-scaffold_464-1491911889:200169..202512TCONS_00067142-exon-scaffold_464-1491911889:200169..202512Clytia hemisphaericaexon
TCONS_00067142-exon-scaffold_464-1510915933:200169..202512TCONS_00067142-exon-scaffold_464-1510915933:200169..202512Clytia hemisphaericaexon
TCONS_00067142-exon-scaffold_464-1575043694:200169..202512TCONS_00067142-exon-scaffold_464-1575043694:200169..202512Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_464supercontigscaffold_464:192885..202512 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.37112 0.146622 3.01314 3.62107 1.3767 1.12146 1.86145 1.86769 2.8085 2.85995 1.26359 1.19572 1.60979 1.84676 2.69259 4.1752 3.25057 3.03565 0.841322 1.33843 1.51694 2.32909 1.47644 0.836386 0 0.098682
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067142 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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