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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067121 ID=TCONS_00067121|Name=TCONS_00067121|organism=Clytia hemisphaerica|type=transcript|length=3289bp
CACCTGCAAATAAGGTGACTGTGGTGCAGTCTCCTCCCCACATTTCATGC
AGTAGTTGCCATCGCGGATTTCTCCACGGCACTCAATGACGACTATGACC
AGACTCTCtctgtaaatttattgtaaCACAAGGCGCGTCTACATGTGTTG
TAATTTAAGGTCCTGTCCTCATGGAAGATTTTTCATCATTAACAAGACGT
AAAAAATCACTGGTGGAGGAGAGCACTTGAGATTTTTTCCAGTTTCTTCA
TANATTCAAACTTTGATCAGTTtgcgaaagcagccggcgaggcgaccttt
ttttccgatgtgttctgagagcatgtttcagctagaaattttgatatgtt
cTGATctgatcttcgaaaattaatcagccaGAAATGATGATGAGTTCTGA
TGaaacaggggtataatcaatgTCATCTACCGTGtccttgttgtctaggt
aacccgcAGTGATTTTTTACGTCTTGATGACGATGAAAATCTTCCATGAG
AATAGGtccgacagggtcccaaatataccaaacattcatatctgacaggg
tccacttttcaaactccagcggcatgTCTCCGTCGGCCGTCAatgtcagt
gcccccccccccggatctACGTGTAGGTGTAGCTAAATCACGTGGTGATT
GAATGGTCGAATAATTACAATAAAATAACAGAGAATCTGATAGTCGTCAC
CTTACAAATGATAGGAAAAAAGTTAACCACTGTATAAAGTTTTCCAATTT
CCAGAGAAACCATAAGTACCATAAGCTTTACGGACGGTATGGACCAGCTT
CTAAGATCGAATAAAAAACACCTGCAAATAAGGTGACTGTGGTGCAGTCT
CCTCCACGGCACTCAATGACGACTATGACCAGACTCTCtctgtaaattta
ttgtaaCACAAGGCGCCTCTACATGTGTTGTAATTTAAGGTCCTGTCCTC
ATGGAAGATTTTTCATCATTAACAAGACGTAAAAAATCACTGGTGGAGGA
GAGCACTTTTTTCCAGTTTCTTCATATTTGTTGTGAGAATGTCGATATTA
TTATTGTTGTGagaattttgatattgttgtgggaagtttgatattgttgt
gagaattttgatattgttgtgagaatATTGATATTATTgtgaaatattga
aatattgttgCGAGTGATTAATATTGTTGTGTGAAATTGTTGTCGTTGTG
GCCGCTCAGGGCTTCCGtaaaccctagaaagcttcagaacccagaacaca
tcttttgtggagcaaaacaaatatcttacaagtttatCTTGGCAAACTGT
TTTTCCGAGATTTTAGGTAGTAGTTCGTTGTAGTTCTTACATCAAACCAT
ATAGTAATGATAAGTTTAGGGAAAACaatagtgcgataaaggtttcctag
aaatcagaacacatcatttgtataaaaaattgaatggTCATcatttggtc
tcctagaagataagaacacatatttctaaaaaatatctCCGACGGCTGCT
TCTGAGTTTGGATCTTTTAAACCAACTTAGTCTCGTAAAAAAAGTATTTA
TATCGAAAATTTAgacagtgtttttttttttttaatttcttggaTTCAAC
CCCAAGGATTGCCCAAAATTCGCCATATTTAATGACATCATCAGCTGCCA
GTTTAAATATTTGCCTTTTCAAACAAAGCTCAAAAGATGGCATGATTTGA
TCGTTAGTAGGTTTTGATGGCAAGACAATATGTTTGGGTTTTAAGATCAA
GAGACGCCCGGAAATTTCAACTCCAAAGAAAGAAGATTTTTGCTCGGGCG
TGAAAGACTTTTGGATTTAAAGTCTTTGATTCGATCGATCGAATCAATta
tttattgtttgttttttccgAACACCTTAGAGGCAATCTCAATAGTTAAA
TACTCGATCATAAACACTATCATCGAGTGGACGATATTCCGTTTCTCTCG
GTACCGTCAAATTAtccaaatcatttttcaaaacaaattcgtGTTGCTCC
TTCACGAAATCAGTCACATCTTTAATTTCCAAGATCCATTCCTCATTAAA
TTGTTTTCTAATGTTCGCTTTCAAACCAAGCTGGATTGCCCGACGTAGCA
CTTTTTCGCCGTATGGGTCGTGATCAGGGTCCCATTGCAAGCGGACTTGA
ATATCATCCTTTTCAACACCTTCGTGTTTTTCCAGTTTTCCTGTATAAGC
ATTCCGCAAAATCTCCTCAAATCCGTCCAATTtaacaaaaatagctaaaa
tacGTTCTTGATTTGGTTTAGCTGCCCACCCGGATCGATACATCATCCAT
AAAAAATTTNGCCTTTTCAAACAAAGCTCAAAAGATGGCATGATTTGATC
GTTAGTAGGTTTTGATGGCAAGACAATATGTTTGGGTTTTAAGATCAAGA
GACGCCCGGAAATTTCAACTCCAAAGAAAGAAGATTTTTGCTCGGGCGTG
AAAGACTTTTGGATTTAAAGTCTTTGATTCGATCGATCGAATCAATtatt
tattgtttgttttttccgAACACCTTAGAGGCAATCTCAATAGTTAAATA
CTCGATCATAAACACTATCATCGAGTGGACGATATTCCGTTTCTCTCGGT
ACCGTCAAATTAtccaaatcatttttcaaaacaaattcgtGTTGCTCCTT
CACGAAATCAGTCACATCTTTAATTTCCAAGATCCATTCCTCATTAAATT
GTTTTCTAATGTTCGCTTTCAAACCAAGCTGGATTGCCCGACGTAGCACT
TTTTCGCCGTATGGGTCGTGATCAGGGTCCCATTGCAAGCGGACTTGAAT
ATCATCCTTTTCAACACCTTCGTGTTTTTCCAGTTTTCCTGTATAAGCAT
TCCGCAAAATCTCCTCAAATCCGTCCAATTtaacaaaaatagctaaaata
cGTTCTTGATTTGGTTTAGTGGCCCACCCGGATCGATACATCATCCACAA
GAAATTAGTTTTGATCCAAGACATTCGATCCGGGTTGTACTCTGCACCTC
CAAAACGTTGATGCTCAACAGCATACTCCGCTAACGATGGTTTAAACGCC
TGGTAAactatgacgtaatcttttgtATGCTGCCCCAATATATGGCGACC
TTCTTGTGGCCATACTTTCCTTTGTGCGACgtatttttcaaactcgattT
CCATAATTCTTGAATGAAAGCCTCGTTTAAAACCACCGAGTAAAGATTGA
TAAAGACCAAATGGTCTGATAATTTTAGTGACGCTTGAAGTAATAATTTT
GACTTTCGTTTgtgttattttttactttttttgggCTGA Run BLAST on NCBI protein sequence of TCONS_00067121-protein >TCONS_00067121-protein ID=TCONS_00067121-protein|Name=TCONS_00067121-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
MEIEFEKYVAQRKVWPQEGRHILGQHTKDYVIVYQAFKPSLAEYAVEHQR
FGGAEYNPDRMSWIKTNFLWMMYRSGWATKPNQERILAIFVKLDGFEEIL
RNAYTGKLEKHEGVEKDDIQVRLQWDPDHDPYGEKVLRRAIQLGLKANIR
KQFNEEWILEIKDVTDFVKEQHEFVLKNDLDNLTVPRETEYRPLDDSVYD
RVFNY Run BLAST on NCBI transcript from alignment at scaffold_463:318941..322229 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067121 ID=TCONS_00067121|Name=TCONS_00067121|organism=Clytia hemisphaerica|type=transcript|length=3289bp|location=Sequence derived from alignment at scaffold_463:318941..322229 (Clytia hemisphaerica)
TCAGcccaaaaaaagtaaaaaataacacAAACGAAAGTCAAAATTATTAC
TTCAAGCGTCACTAAAATTATCAGACCATTTGGTCTTTATCAATCTTTAC
TCGGTGGTTTTAAACGAGGCTTTCATTCAAGAATTATGGAaatcgagttt
gaaaaatacGTCGCACAAAGGAAAGTATGGCCACAAGAAGGTCGCCATAT
ATTGGGGCAGCATacaaaagattacgtcatagtTTACCAGGCGTTTAAAC
CATCGTTAGCGGAGTATGCTGTTGAGCATCAACGTTTTGGAGGTGCAGAG
TACAACCCGGATCGAATGTCTTGGATCAAAACTAATTTCTTGTGGATGAT
GTATCGATCCGGGTGGGCCACTAAACCAAATCAAGAACgtattttagcta
tttttgttaAATTGGACGGATTTGAGGAGATTTTGCGGAATGCTTATACA
GGAAAACTGGAAAAACACGAAGGTGTTGAAAAGGATGATATTCAAGTCCG
CTTGCAATGGGACCCTGATCACGACCCATACGGCGAAAAAGTGCTACGTC
GGGCAATCCAGCTTGGTTTGAAAGCGAACATTAGAAAACAATTTAATGAG
GAATGGATCTTGGAAATTAAAGATGTGACTGATTTCGTGAAGGAGCAACa
cgaatttgttttgaaaaatgatttggaTAATTTGACGGTACCGAGAGAAA
CGGAATATCGTCCACTCGATGATAGTGTTTATGATCGAGTATTTAACTAT
TGAGATTGCCTCTAAGGTGTTcggaaaaaacaaacaataaataATTGATT
CGATCGATCGAATCAAAGACTTTAAATCCAAAAGTCTTTCACGCCCGAGC
AAAAATCTTCTTTCTTTGGAGTTGAAATTTCCGGGCGTCTCTTGATCTTA
AAACCCAAACATATTGTCTTGCCATCAAAACCTACTAACGATCAAATCAT
GCCATCTTTTGAGCTTTGTTTGAAAAGGCNAAATTTTTTATGGATGATGT
ATCGATCCGGGTGGGCAGCTAAACCAAATCAAGAACgtattttagctatt
tttgttaAATTGGACGGATTTGAGGAGATTTTGCGGAATGCTTATACAGG
AAAACTGGAAAAACACGAAGGTGTTGAAAAGGATGATATTCAAGTCCGCT
TGCAATGGGACCCTGATCACGACCCATACGGCGAAAAAGTGCTACGTCGG
GCAATCCAGCTTGGTTTGAAAGCGAACATTAGAAAACAATTTAATGAGGA
ATGGATCTTGGAAATTAAAGATGTGACTGATTTCGTGAAGGAGCAACacg
aatttgttttgaaaaatgatttggaTAATTTGACGGTACCGAGAGAAACG
GAATATCGTCCACTCGATGATAGTGTTTATGATCGAGTATTTAACTATTG
AGATTGCCTCTAAGGTGTTcggaaaaaacaaacaataaataATTGATTCG
ATCGATCGAATCAAAGACTTTAAATCCAAAAGTCTTTCACGCCCGAGCAA
AAATCTTCTTTCTTTGGAGTTGAAATTTCCGGGCGTCTCTTGATCTTAAA
ACCCAAACATATTGTCTTGCCATCAAAACCTACTAACGATCAAATCATGC
CATCTTTTGAGCTTTGTTTGAAAAGGCAAATATTTAAACTGGCAGCTGAT
GATGTCATTAAATATGGCGAATTTTGGGCAATCCTTGGGGTTGAAtccaa
gaaattaaaaaaaaaaaaacactgtcTAAATTTTCGATATAAATACTTTT
TTTACGAGACTAAGTTGGTTTAAAAGATCCAAACTCAGAAGCAGCCGTCG
GagatattttttagaaatatgtgttcttatcttctaggagaccaaatgAT
GAccattcaattttttatacaaatgatgtgttctgatttctaggaaacct
ttatcgcactattGTTTTCCCTAAACTTATCATTACTATATGGTTTGATG
TAAGAACTACAACGAACTACTACCTAAAATCTCGGAAAAACAGTTTGCCA
AGataaacttgtaagatatttgttttgctccacaaaagatgtgttctggg
ttctgaagctttctagggtttaCGGAAGCCCTGAGCGGCCACAACGACAA
CAATTTCACACAACAATATTAATCACTCGcaacaatatttcaatatttca
cAATAATATCAATattctcacaacaatatcaaaattctcacaacaatatc
aaacttcccacaacaatatcaaaattctCACAACAATAATAATATCGACA
TTCTCACAACAAATATGAAGAAACTGGAAAAAAGTGCTCTCCTCCACCAG
TGATTTTTTACGTCTTGTTAATGATGAAAAATCTTCCATGAGGACAGGAC
CTTAAATTACAACACATGTAGAGGCGCCTTGTGttacaataaatttacag
aGAGAGTCTGGTCATAGTCGTCATTGAGTGCCGTGGAGGAGACTGCACCA
CAGTCACCTTATTTGCAGGTGTTTTTTATTCGATCTTAGAAGCTGGTCCA
TACCGTCCGTAAAGCTTATGGTACTTATGGTTTCTCTGGAAATTGGAAAA
CTTTATACAGTGGTTAACTTTTTTCCTATCATTTGTAAGGTGACGACTAT
CAGATTCTCTGTTATTTTATTGTAATTATTCGACCATTCAATCACCACGT
GATTTAGCTACACCTACACGTagatccgggggggggggcactgacatTGA
CGGCCGACGGAGAcatgccgctggagtttgaaaagtggaccctgtcagat
atgaatgtttggtatatttgggaccctgtcggaCCTATTCTCATGGAAGA
TTTTCATCGTCATCAAGACGTAAAAAATCACTgcgggttacctagacaac
aaggaCACGGTAGATGAcattgattatacccctgtttCATCAGAACTCAT
CATCATTTCtggctgattaattttcgaagatcagATCAgaacatatcaaa
atttctagctgaaacatgctctcagaacacatcggaaaaaaaggtcgcct
cgccggctgctttcgcaAACTGATCAAAGTTTGAATNTATGAAGAAACTG
GAAAAAATCTCAAGTGCTCTCCTCCACCAGTGATTTTTTACGTCTTGTTA
ATGATGAAAAATCTTCCATGAGGACAGGACCTTAAATTACAACACATGTA
GACGCGCCTTGTGttacaataaatttacagaGAGAGTCTGGTCATAGTCG
TCATTGAGTGCCGTGGAGAAATCCGCGATGGCAACTACTGCATGAAATGT
GGGGAGGAGACTGCACCACAGTCACCTTATTTGCAGGTG Coding sequence (CDS) from alignment at scaffold_463:318941..322229 >TCONS_00067121 ID=TCONS_00067121|Name=TCONS_00067121|organism=Clytia hemisphaerica|type=CDS|length=618bp|location=Sequence derived from alignment at scaffold_463:318941..322229 (Clytia hemisphaerica)
ATGGAaatcgagtttgaaaaatacGTCGCACAAAGGAAAGTATGGCCACA
AGAAGGTCGCCATATATTGGGGCAGCATacaaaagattacgtcatagtTT
ACCAGGCGTTTAAACCATCGTTAGCGGAGTATGCTGTTGAGCATCAACGT
TTTGGAGGTGCAGAGTACAACCCGGATCGAATGTCTTGGATCAAAACTAA
TTTCTTGTGGATGATGTATCGATCCGGGTGGGCCACTAAACCAAATCAAG
AACgtattttagctatttttgttaAATTGGACGGATTTGAGGAGATTTTG
CGGAATGCTTATACAGGAAAACTGGAAAAACACGAAGGTGTTGAAAAGGA
TGATATTCAAGTCCGCTTGCAATGGGACCCTGATCACGACCCATACGGCG
AAAAAGTGCTACGTCGGGCAATCCAGCTTGGTTTGAAAGCGAACATTAGA
AAACAATTTAATGAGGAATGGATCTTGGAAATTAAAGATGTGACTGATTT
CGTGAAGGAGCAACacgaatttgttttgaaaaatgatttggaTAATTTGA
CGGTACCGAGAGAAACGGAATATCGTCCACTCGATGATAGTGTTTATGAT
CGAGTATTTAACTATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067121-exon-scaffold_463-1491911889:318941..322229 | TCONS_00067121-exon-scaffold_463-1491911889:318941..322229 | Clytia hemisphaerica | exon |
| TCONS_00067121-exon-scaffold_463-1510915933:318941..322229 | TCONS_00067121-exon-scaffold_463-1510915933:318941..322229 | Clytia hemisphaerica | exon |
| TCONS_00067121-exon-scaffold_463-1575043694:318941..322229 | TCONS_00067121-exon-scaffold_463-1575043694:318941..322229 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| scaffold_463 | supercontig | scaffold_463:318941..322229 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR025633 | DUF4291 |
Blast
The following BLAST results are available for this feature:
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