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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067114 ID=TCONS_00067114|Name=TCONS_00067114|organism=Clytia hemisphaerica|type=transcript|length=1050bp
TTTCCTCATCTGTCTAAATGCTTGAGTTTTTTGAAGAATACCTTCAGGTA
CGACATTATTTATTTGTTATTAAAGGGCGAGGAGGCAGCATACTGCAAAT
TTGTCAAAGAACGTTTACAGAAAAAGTTGTAAAGCTATTTGACAAAATTC
CAAAGACCAGAAAATCCAAGAGAAGAAGTAAGAACTGGGGGTGTCTTGAC
GTAAACAAGGAAACTATTCACTTTCTTCGAATGATCGATTATTCCCGATT
GCTCTTGACGTTTCAGAGGTCCTCAAACACGAAATTGTTTCAGtgtcatt
ttatttgaaaagtctCCAAGATCAGAGCTCACTAGGGCGTTAAAATATCG
TCTAGAGAAACCACAACAGTCTGACCTGCTAACTGCCGTAGTCATCGATT
ATATGGCATACGCTCGAAAAGTTTCAACGAAAAAGATGCGTTTAGTCACT
TACGAGGACTTCTTTGGTGTTCTTTGGAAGATGTTCTCAAGACTTTCAAA
AGGATCAAGGAGAATCGACATAGTATTTGATGTCTACCGGAGATGTAGTA
TTAAACAGAGTGAGCGCAATCGGCGAAGCAAACAAGACCCAATAGAAACA
CACATAATAAACGTGAAACAACACCTCCCTGTTGACATGGATCGATTTTG
GTCATCTTCCGAGAATAAGATGCGGTTCCAACAAGCTTTTAGCAAGTGGG
TGCAAGAAAATCATATAAACGACACACCTGTTTATTTAGGTGGAGCAGGG
NATGCAAGAAAATCATATAAACGACACACCTGTCGTTTTAGGTGGAGCCG
GCAAAGAAATTGTCACCGCTGGCATCAAAGTATGCTCCGTCAACCCGTCA
CATGATACCGAGTCCTTAAGGTGCAATCATGAAGAAGCTGATGACCGGAT
GATGTTTCACATTTACCAGGCGATGATAACAACAGACAACATAGAATCGt
tctacaatcagggacaaaatacttggcacaaaagggaaattcaccggggt
gttttgaaaccacaatcgatttgtaagtgctctaaagtaggttcgaaggg Run BLAST on NCBI protein sequence of TCONS_00067114-protein >TCONS_00067114-protein ID=TCONS_00067114-protein|Name=TCONS_00067114-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
MAYARKVSTKKMRLVTYEDFFGVLWKMFSRLSKGSRRIDIVFDVYRRCSI
KQSERNRRSKQDPIETHIINVKQHLPVDMDRFWSSSENKMRFQQAFSKWV
QENHINDTPVYLGGAGXARKSYKRHTCRFRWSRQRNCHRWHQSMLRQPVT Run BLAST on NCBI transcript from alignment at scaffold_463:259756..260805 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067114 ID=TCONS_00067114|Name=TCONS_00067114|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at scaffold_463:259756..260805 (Clytia hemisphaerica)
cccttcgaacctactttagagcacttacaaatcgattgtggtttcaaaac
accccggtgaatttcccttttgtgccaagtattttgtccctgattgtaga
aCGATTCTATGTTGTCTGTTGTTATCATCGCCTGGTAAATGTGAAACATC
ATCCGGTCATCAGCTTCTTCATGATTGCACCTTAAGGACTCGGTATCATG
TGACGGGTTGACGGAGCATACTTTGATGCCAGCGGTGACAATTTCTTTGC
CGGCTCCACCTAAAACGACAGGTGTGTCGTTTATATGATTTTCTTGCATN
CCCTGCTCCACCTAAATAAACAGGTGTGTCGTTTATATGATTTTCTTGCA
CCCACTTGCTAAAAGCTTGTTGGAACCGCATCTTATTCTCGGAAGATGAC
CAAAATCGATCCATGTCAACAGGGAGGTGTTGTTTCACGTTTATTATGTG
TGTTTCTATTGGGTCTTGTTTGCTTCGCCGATTGCGCTCACTCTGTTTAA
TACTACATCTCCGGTAGACATCAAATACTATGTCGATTCTCCTTGATCCT
TTTGAAAGTCTTGAGAACATCTTCCAAAGAACACCAAAGAAGTCCTCGTA
AGTGACTAAACGCATCTTTTTCGTTGAAACTTTTCGAGCGTATGCCATAT
AATCGATGACTACGGCAGTTAGCAGGTCAGACTGTTGTGGTTTCTCTAGA
CGATATTTTAACGCCCTAGTGAGCTCTGATCTTGGagacttttcaaataa
aatgacaCTGAAACAATTTCGTGTTTGAGGACCTCTGAAACGTCAAGAGC
AATCGGGAATAATCGATCATTCGAAGAAAGTGAATAGTTTCCTTGTTTAC
GTCAAGACACCCCCAGTTCTTACTTCTTCTCTTGGATTTTCTGGTCTTTG
GAATTTTGTCAAATAGCTTTACAACTTTTTCTGTAAACGTTCTTTGACAA
ATTTGCAGTATGCTGCCTCCTCGCCCTTTAATAACAAATAAATAATGTCG
TACCTGAAGGTATTCTTCAAAAAACTCAAGCATTTAGACAGATGAGGAAA
Coding sequence (CDS) from alignment at scaffold_463:259756..260805 >TCONS_00067114 ID=TCONS_00067114|Name=TCONS_00067114|organism=Clytia hemisphaerica|type=CDS|length=453bp|location=Sequence derived from alignment at scaffold_463:259756..260805 (Clytia hemisphaerica)
TCATGTGACGGGTTGACGGAGCATACTTTGATGCCAGCGGTGACAATTTC
TTTGCCGGCTCCACCTAAAACGACAGGTGTGTCGTTTATATGATTTTCTT
GCATNCCCTGCTCCACCTAAATAAACAGGTGTGTCGTTTATATGATTTTC
TTGCACCCACTTGCTAAAAGCTTGTTGGAACCGCATCTTATTCTCGGAAG
ATGACCAAAATCGATCCATGTCAACAGGGAGGTGTTGTTTCACGTTTATT
ATGTGTGTTTCTATTGGGTCTTGTTTGCTTCGCCGATTGCGCTCACTCTG
TTTAATACTACATCTCCGGTAGACATCAAATACTATGTCGATTCTCCTTG
ATCCTTTTGAAAGTCTTGAGAACATCTTCCAAAGAACACCAAAGAAGTCC
TCGTAAGTGACTAAACGCATCTTTTTCGTTGAAACTTTTCGAGCGTATGC
CAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067114-exon-scaffold_463-1491911889:259756..260805 | TCONS_00067114-exon-scaffold_463-1491911889:259756..260805 | Clytia hemisphaerica | exon |
| TCONS_00067114-exon-scaffold_463-1510915933:259756..260805 | TCONS_00067114-exon-scaffold_463-1510915933:259756..260805 | Clytia hemisphaerica | exon |
| TCONS_00067114-exon-scaffold_463-1575043694:259756..260805 | TCONS_00067114-exon-scaffold_463-1575043694:259756..260805 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_463 | supercontig | scaffold_463:259756..260805 . |
Blast
The following BLAST results are available for this feature:
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