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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067109 ID=TCONS_00067109|Name=TCONS_00067109|organism=Clytia hemisphaerica|type=transcript|length=857bp
ATTGAATATctagataaaataaaattaaaacatgtATCAAAATTGGAGTA
GTCATACATCGAATTTCCAAGTGAACTATACATAATCATCTTACCATCGG
AAATGTTCATTATAatataaagaagaaaagaaatgcACCTCATTACTGTG
TTATTCTTTTTATTCAactattttaatttcaaattcacaaaatatgcatt
tatttggaatttatttTCTTCCGAGTAACCAGATGAGAACTATTAGAGTC
TCTTAtttattttgctaaatttctttcaaattggcAATTTTGAATTATAA
TAATTATCCAATTTATAAGAGTACTGTATTTATCATTAAGGGACTTAAAG
AttcgttttctcttttttttcagctGCATCTCCATGGATTTGTTGAAAGA
GGATGAATTTACGATGGCGATATCTCTATGCCATCATCTGTATGATTTTC
ATTTTGGCGTGCAATATTTACATTCTGAAAACGATCTTTGGCAACGCTGA
TACAAGCCTGGCTATATTCAATTCTTTTCATTCATCCAAAGAAACAAGAG
AAGTTAAAACGTTGAATCAAACTGCAAAAAAAGCTCTCCTTTCTAGCTCA
TTTAAGGCGTTTTCTCACTTAAATACTGGGTTGAAATGTGACTTGTGGTT
TGATATTTGTTTGACCAATGGAATACATCACAGCTTATGGCATCCTTTAT
ATCCCATTCTACCTCAAGACGAACATATTTTACAGAATCTTGATACCTTA
GCGATTTCAAAAGAACACCAGCAGTCTTTGAAAAGAATATATGGATTTAT
TGAAATCGATCGTCCTTCAAGATACACAGTAAGTTTTCTATTTGATGGAG
CTTTAGA Run BLAST on NCBI protein sequence of TCONS_00067109-protein >TCONS_00067109-protein ID=TCONS_00067109-protein|Name=TCONS_00067109-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
MNLRWRYLYAIICMIFILACNIYILKTIFGNADTSLAIFNSFHSSKETRE
VKTLNQTAKKALLSSSFKAFSHLNTGLKCDLWFDICLTNGIHHSLWHPLY
PILPQDEHILQNLDTLAISKEHQQSLKRIYGFIEIDRPSRYTVSFLFDGA
L Run BLAST on NCBI transcript from alignment at scaffold_463:3123..3979 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067109 ID=TCONS_00067109|Name=TCONS_00067109|organism=Clytia hemisphaerica|type=transcript|length=857bp|location=Sequence derived from alignment at scaffold_463:3123..3979 (Clytia hemisphaerica)
TCTAAAGCTCCATCAAATAGAAAACTTACTGTGTATCTTGAAGGACGATC
GATTTCAATAAATCCATATATTCTTTTCAAAGACTGCTGGTGTTCTTTTG
AAATCGCTAAGGTATCAAGATTCTGTAAAATATGTTCGTCTTGAGGTAGA
ATGGGATATAAAGGATGCCATAAGCTGTGATGTATTCCATTGGTCAAACA
AATATCAAACCACAAGTCACATTTCAACCCAGTATTTAAGTGAGAAAACG
CCTTAAATGAGCTAGAAAGGAGAGCTTTTTTTGCAGTTTGATTCAACGTT
TTAACTTCTCTTGTTTCTTTGGATGAATGAAAAGAATTGAATATAGCCAG
GCTTGTATCAGCGTTGCCAAAGATCGTTTTCAGAATGTAAATATTGCACG
CCAAAATGAAAATCATACAGATGATGGCATAGAGATATCGCCATCGTAAA
TTCATCCTCTTTCAACAAATCCATGGAGATGCagctgaaaaaaaagagaa
aacgaaTCTTTAAGTCCCTTAATGATAAATACAGTACTCTTATAAATTGG
ATAATTATTATAATTCAAAATTgccaatttgaaagaaatttagcaaaata
aaTAAGAGACTCTAATAGTTCTCATCTGGTTACTCGGAAGAaaataaatt
ccaaataaatgcatattttgtgaatttgaaattaaaatagtTGAATAAAA
AGAATAACACAGTAATGAGGTgcatttcttttcttctttatatTATAATG
AACATTTCCGATGGTAAGATGATTATGTATAGTTCACTTGGAAATTCGAT
GTATGACTACTCCAATTTTGATacatgttttaattttattttatctagAT
ATTCAAT Coding sequence (CDS) from alignment at scaffold_463:3123..3979 >TCONS_00067109 ID=TCONS_00067109|Name=TCONS_00067109|organism=Clytia hemisphaerica|type=CDS|length=453bp|location=Sequence derived from alignment at scaffold_463:3123..3979 (Clytia hemisphaerica)
TAAAGCTCCATCAAATAGAAAACTTACTGTGTATCTTGAAGGACGATCGA
TTTCAATAAATCCATATATTCTTTTCAAAGACTGCTGGTGTTCTTTTGAA
ATCGCTAAGGTATCAAGATTCTGTAAAATATGTTCGTCTTGAGGTAGAAT
GGGATATAAAGGATGCCATAAGCTGTGATGTATTCCATTGGTCAAACAAA
TATCAAACCACAAGTCACATTTCAACCCAGTATTTAAGTGAGAAAACGCC
TTAAATGAGCTAGAAAGGAGAGCTTTTTTTGCAGTTTGATTCAACGTTTT
AACTTCTCTTGTTTCTTTGGATGAATGAAAAGAATTGAATATAGCCAGGC
TTGTATCAGCGTTGCCAAAGATCGTTTTCAGAATGTAAATATTGCACGCC
AAAATGAAAATCATACAGATGATGGCATAGAGATATCGCCATCGTAAATT
CAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067109-exon-scaffold_463-1491911889:3123..3979 | TCONS_00067109-exon-scaffold_463-1491911889:3123..3979 | Clytia hemisphaerica | exon |
| TCONS_00067109-exon-scaffold_463-1510915933:3123..3979 | TCONS_00067109-exon-scaffold_463-1510915933:3123..3979 | Clytia hemisphaerica | exon |
| TCONS_00067109-exon-scaffold_463-1575043694:3123..3979 | TCONS_00067109-exon-scaffold_463-1575043694:3123..3979 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_463 | supercontig | scaffold_463:3123..3979 . |
Blast
The following BLAST results are available for this feature:
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