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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067086 ID=TCONS_00067086|Name=TCONS_00067086|organism=Clytia hemisphaerica|type=transcript|length=2398bp
GGCCTCTTTAGAAGTCATGAGTTACTTAATCGACATGTGATCACATGATT
AATCAatctaaaataaacaaaaagaaggtCTTAGCTAAACAAGAATTTGT
ACTATATATCGATCATTTTTCAGTGCGACAGTGTCTAGCAGACGTTTCTT
ATTCATTACAATCTTGTAGTGTTTACAGCTAGGATGTCATTTACTTCGAG
TGAAAATCATGAAAAGCAACCTCTCTTAACATCCGAATCTAGTCAAAACT
ATCATAAACGCCATGGAACCAATGAGAGCCTTGAAGGTTCTCACTTTGTG
GAAGTCAACCCTGGCGGCCTTTCCGTTATCAAATGCGCAATTTTTATCAT
CGCTCAGATGGCTGGTAGCGGAATTCTTGCATTACCAGATGCCGTGAGTG
GAACTGGGTGGACCGGTATTTTCCTTATCGCGGCTTTGGGGAGTCTAGCT
TGTTATTGTGGAACTATGCTGGGTAAATGTTGGGTGATTATCCGGCGTGA
TAACAACATACCGGGTCATGTCCGGGATCCTTACCCTTTGATTGGATATT
ATGCTGgaggaaaaaaagggaaatatgTTGTAGAATTCTGTGTTATGATC
ACACTATTGGGTGCTTCCGTTGTTTTTCTGTTGCTGTCTGCTAGGGAAGT
ATCATCCATTCTGGACGTTTCAATTGGTTCGTTCAATACACAGAAAACTG
AGTTCCGCATTTGGTTGTTGGTCATTGGGGGGATTCTCATCCCATGCACT
TGGTTCGCTTCTCCCAAAGAAATGTGGTTGTTTGCTTACGGTGCCAGTTT
GTGCACCATTATCGCTTGTTGGATGATCGTTATCAGAGCTTGTATGCAAA
TCGCTCGAGATGGTATCGCTCCGGCTTCTGCACGTAAGGACCCTTCAGCT
GAAGGTTTCTTCAACGCGTTCGGGACGATCGCTTTCGCTTTTGGAGGAGG
TGCAATCTTTCCAACCTTTCAAGCTGACATGGAAAAACCAAGTAAATTTG
TTTACTCAGCAATATTAGGTTTTGCAGGTGTTCTTTCTTTATACATGCCA
GTGGCCATACTTCCATATATTGGACTTGGTAGCAACCTGGATACAAACAT
CTTAACCACTATGAAGAATCTGGAAGGTGATGGTCACACTTTGATTCTAG
CAGCTGAATGTTTGATCACTTTTCACTTGTTATTCGCTGTAATCATCTTG
AATAATCCAATTTCACAACAGATCGAAGAACACATTGGCATCGAACACAA
GTTTGGTTGGAGGAGAATTTTATGTCGTTCAGGAATAATGTTACTGGTGA
TGGGATTGGCGGAACTTTTCCCGAACTTTGGACCAGTTCTTTCTTTCATA
GGAGCATCTACAGTCACAATGATGTCATTCATTTTACCAGCAATCTTCTA
CCTTTCTTTACAACACTCAGAACTAGTTCCTCTACATCAAAAGGTGTTCC
ACTACGAGATCATTTTAATCTCGCTCATATTTGGTTGTGCTGGTATTTAT
TCTTCAGTTCAAGGGTTCTCCAACCCATTCAAAGCTTGATTATTCATTTA
TAAAACCTGCCAACGGTAGACAATTTTCATCTCGCAATTAAAGTATTTGG
ATGTGCCCCAATAATCGAAACCTCGACTTGATTCGAGCGAAGAATGTTTT
TCGCGCTTCAAAAACTTATCACGATTGGATATCGAGGAATGACATCATGA
GGCAGAGTGACAAAATTGAATTATTTACAGTAATTATATTGTCGCTCTTT
TGTGCAGATAGGAAGTGGGCCTTAGACCTTTTTATAAAtcacgtcacgaa
catcacttgcctcgttttgaaattattgccatggcgATTAACTCCCATCG
GATTTTATTaccatttaatgtctcaagggatatgatcACCATAGAAATTG
CTTAAATACGAGGTAAGTGATGTTTgtgaaataattaaaaaaaaagcctA
TTGTTCTTATGTCCTCAGATTATAAATTTTACCCCTTGTTAAACTTTGGC
TAAAAAGTCAATCATTGAATATAGTTACACTTGTAGGCATAAAAGTGCGC
CCACAACTAGCTCGACTGgttgaattaaaaaagtttttataagattttaa
TTTCATATTTGTAAATATTGCTTTGATTTCACTTTTACATTCATGCTGTA
TCGAAATAATTCAATCtctaaaaataatatttctggaaGATTCTTCGTCA
CCAAATGTGGTAGATCGTATGTAGTGGATCGCTGGTTGAATTCTTAACAA
GTTTTCAAGCTGGTAAAGAATTAAAGCGAAGCTTGTTTTACCCTAAACAG
GTTTCCCACTAAAAACTGGTAAAGAAGTCGCCCCCAGCTGGTTAAGAATT
TGGCCAACTGGTTAAGAATCTAGCCAAGAGCTGGTAATGGTTAGGCCT Run BLAST on NCBI protein sequence of TCONS_00067086-protein >TCONS_00067086-protein ID=TCONS_00067086-protein|Name=TCONS_00067086-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MSFTSSENHEKQPLLTSESSQNYHKRHGTNESLEGSHFVEVNPGGLSVIK
CAIFIIAQMAGSGILALPDAVSGTGWTGIFLIAALGSLACYCGTMLGKCW
VIIRRDNNIPGHVRDPYPLIGYYAGGKKGKYVVEFCVMITLLGASVVFLL
LSAREVSSILDVSIGSFNTQKTEFRIWLLVIGGILIPCTWFASPKEMWLF
AYGASLCTIIACWMIVIRACMQIARDGIAPASARKDPSAEGFFNAFGTIA
FAFGGGAIFPTFQADMEKPSKFVYSAILGFAGVLSLYMPVAILPYIGLGS
NLDTNILTTMKNLEGDGHTLILAAECLITFHLLFAVIILNNPISQQIEEH
IGIEHKFGWRRILCRSGIMLLVMGLAELFPNFGPVLSFIGASTVTMMSFI
LPAIFYLSLQHSELVPLHQKVFHYEIILISLIFGCAGIYSSVQGFSNPFK
A Run BLAST on NCBI transcript from alignment at scaffold_463:241735..244516+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067086 ID=TCONS_00067086|Name=TCONS_00067086|organism=Clytia hemisphaerica|type=transcript|length=2782bp|location=Sequence derived from alignment at scaffold_463:241735..244516+ (Clytia hemisphaerica)
GGCCTCTTTAGAAGTCATGAGTTACTTAATCGACATGTGATCACATGATT
AATCAatctaaaataaacaaaaagaaggtCTTAGCTAAACAAGAATTTGT
ACTATATATCGATCATTTTTCAGTGCGACAGTGTCTAGCAGACGTTTCTT
ATTCATTACAATCTTGTAGTGTTTACAGCTAGGATGTCATTTACTTCGAG
TGAAAATCATGAAAAGCAACCTCTCTTAACATCCGAATCTAGTCAAAACT
ATCATAAACGCCATGGAACCAATGAGAGCCTTGAAGGTTCTCACTTTGTG
GAAGTCAACCCTGGCGGCCTTTCCGTTATCAAATGCGCAATTTTTATCAT
CGCTCAGATGGCTGGTAGCGGAATTCTTGCATTACCAGATGCCGTGAGTG
GAACTGGGTGGACCGGTATTTTCCTTATCGCGGCTTTGGGGAGTCTAGCT
TGTTATTGTGGAACTATGCTGGGTAAATGTTGGGTGATTATCCGGCGTGA
TAACAACATACCGGGTCATGTCCGGGATCCTTACCCTTTGATTGGATATT
ATGCTGgaggaaaaaaagggaaatatgTTGTAGAATTCTGTGTTATGATC
ACACTATTGGGTGCTTCCGTTGTTTTTCTGTTGCTGTCTGCTAGGGAAGT
ATCATCCATTCTGGACGTTTCAATTGGTTCGTTCAATACACAGAAAACTG
AGTTCCGCATTTGGTTGTTGGTCATTGGGGGGATTCTCATCCCATGCACT
TGGTTCGCTTCTCCCAAAGAAATGTGGTTGTTTGCTTACGGTGCCAGTTT
GTGCACCATTATCGCTTGTTGGATGATCGTTATCAGAGCTTGTATGCAAA
TCGCTCGAGATGGTATCGCTCCGGCTTCTGCACGTAAGGACCCTTCAGCT
GAAGGTTTCTTCAACGCGTTCGGGACGATCGCTTTCGCTTTTGGAGGAGG
TGCAATCTTTCCAACCTTTCAAGCTGACATGGAAAAACCAAGTAAATTTG
TTTACTCAGCAATATTAGGTTTTGCAGGTGTTCTTTCTTTATACATGCCA
GTGGCCATACTTCCATATATTGGACTTGGTAGCAACCTGGATACAAACAT
CTTAACCACTATGAAGAATCTGGAAGGTGATGGTCACACTTTGATTCTAG
CAGCTGAATGTTTGATCACTTTTCACTTGTTATTCGCTGTAATCATCTTG
AATAATCCAATTTCACAACAGATCGAAGAACACATTGGCATCGAACACAG
TAAGAACACtcttaaaatgaaaagaaatgacTTTCAGATTTCCGAGAACG
TTTTTTTAGAACTATGCGTCACTTTGGAAATGTATAAAAAGTTAAATTCC
ACTATCACGTTCATATTGAATTTATCTTCTCAGCGTCTCGTCCTTAGAAG
GGACTCTTATTACACATTAACAGGGCCCACGCCATGAATTTGAAAGTGGG
GGGTGGCAATAaatatagagtctaaggaggcgcaacctttttttttactt
tgcaaaaatGTGGGGTGGGCATGGCCCCCCTGGTCCCCCCGGTAGCGTGG
GCCCTGATTAGTCAAAGAGTTTGCTTTTCTAGATAGATACAAATGTAGTA
ACTTTCGATTTTCACCTTATTTCCTTCTTTTAGAGTTTGGTTGGAGGAGA
ATTTTATGTCGTTCAGGAATAATGTTACTGGTGATGGGATTGGCGGAACT
TTTCCCGAACTTTGGACCAGTTCTTTCTTTCATAGGAGCATCTACAGTCA
CAATGATGTCATTCATTTTACCAGCAATCTTCTACCTTTCTTTACAACAC
TCAGAACTAGTTCCTCTACATCAAAAGGTGTTCCACTACGAGATCATTTT
AATCTCGCTCATATTTGGTTGTGCTGGTATTTATTCTTCAGTTCAAGGGT
TCTCCAACCCATTCAAAGCTTGATTATTCATTTATAAAACCTGCCAACGG
TAGACAATTTTCATCTCGCAATTAAAGTATTTGGATGTGCCCCAATAATC
GAAACCTCGACTTGATTCGAGCGAAGAATGTTTTTCGCGCTTCAAAAACT
TATCACGATTGGATATCGAGGAATGACATCATGAGGCAGAGTGACAAAAT
TGAATTATTTACAGTAATTATATTGTCGCTCTTTTGTGCAGATAGGAAGT
GGGCCTTAGACCTTTTTATAAAtcacgtcacgaacatcacttgcctcgtt
ttgaaattattgccatggcgATTAACTCCCATCGGATTTTATTaccattt
aatgtctcaagggatatgatcACCATAGAAATTGCTTAAATACGAGGTAA
GTGATGTTTgtgaaataattaaaaaaaaagcctATTGTTCTTATGTCCTC
AGATTATAAATTTTACCCCTTGTTAAACTTTGGCTAAAAAGTCAATCATT
GAATATAGTTACACTTGTAGGCATAAAAGTGCGCCCACAACTAGCTCGAC
TGgttgaattaaaaaagtttttataagattttaaTTTCATATTTGTAAAT
ATTGCTTTGATTTCACTTTTACATTCATGCTGTATCGAAATAATTCAATC
tctaaaaataatatttctggaaGATTCTTCGTCACCAAATGTGGTAGATC
GTATGTAGTGGATCGCTGGTTGAATTCTTAACAAGTTTTCAAGCTGGTAA
AGAATTAAAGCGAAGCTTGTTTTACCCTAAACAGGTTTCCCACTAAAAAC
TGGTAAAGAAGTCGCCCCCAGCTGGTTAAGAATTTGGCCAACTGGTTAAG
AATCTAGCCAAGAGCTGGTAATGGTTAGGCCT Coding sequence (CDS) from alignment at scaffold_463:241735..244516+ >TCONS_00067086 ID=TCONS_00067086|Name=TCONS_00067086|organism=Clytia hemisphaerica|type=CDS|length=2712bp|location=Sequence derived from alignment at scaffold_463:241735..244516+ (Clytia hemisphaerica)
ATGTCATTTACTTCGAGTGAAAATCATGAAAAGCAACCTCTCTTAACATC
CGAATCTAGTCAAAACTATCATAAACGCCATGGAACCAATGAGAGCCTTG
AAGGTTCTCACTTTGTGGAAGTCAACCCTGGCGGCCTTTCCGTTATCAAA
TGCGCAATTTTTATCATCGCTCAGATGGCTGGTAGCGGAATTCTTGCATT
ACCAGATGCCGTGAGTGGAACTGGGTGGACCGGTATTTTCCTTATCGCGG
CTTTGGGGAGTCTAGCTTGTTATTGTGGAACTATGCTGGGTAAATGTTGG
GTGATTATCCGGCGTGATAACAACATACCGGGTCATGTCCGGGATCCTTA
CCCTTTGATTGGATATTATGCTGgaggaaaaaaagggaaatatgTTGTAG
AATTCTGTGTTATGATCACACTATTGGGTGCTTCCGTTGTTTTTCTGTTG
CTGTCTGCTAGGGAAGTATCATCCATTCTGGACGTTTCAATTGGTTCGTT
CAATACACAGAAAACTGAGTTCCGCATTTGGTTGTTGGTCATTGGGGGGA
TTCTCATCCCATGCACTTGGTTCGCTTCTCCCAAAGAAATGTGGTTGTTT
GCTTACGGTGCCAGTTTGTGCACCATTATCGCTTGTTGGATGATCGTTAT
CAGAGCTTGTATGCAAATCGCTCGAGATGGTATCGCTCCGGCTTCTGCAC
GTAAGGACCCTTCAGCTGAAGGTTTCTTCAACGCGTTCGGGACGATCGCT
TTCGCTTTTGGAGGAGGTGCAATCTTTCCAACCTTTCAAGCTGACATGGA
AAAACCAAGTAAATTTGTTTACTCAGCAATATTAGGTTTTGCAGGTGTTC
TTTCTTTATACATGCCAGTGGCCATACTTCCATATATTGGACTTGGTAGC
AACCTGGATACAAACATCTTAACCACTATGAAGAATCTGGAAGGTGATGG
TCACACTTTGATTCTAGCAGCTGAATGTTTGATCACTTTTCACTTGTTAT
TCGCTGTAATCATCTTGAATAATCCAATTTCACAACAGATCGAAGAACAC
ATTGGCATCGAACACAAGTTTGGTTGGAGGAGAATTTTATGTCGTTCAGG
AATAATGTTACTGGTGATGGGATTGGCGGAACTTTTCCCGAACTTTGGAC
CAGTTCTTTCTTTCATAGGAGCATCTACAGTCACAATGATGTCATTCATT
TTACCAGCAATCTTCTACCTTTCTTTACAACACTCAGAACTAGTTCCTCT
ACATCAAAAGGTGTTCCACTACGAGATCATTTTAATCTCGCTCATATTTG
GTTGTGCTGGTATTTATTCTTCAGTTCAAGGGTTCTCCAACCCATTCAAA
GCTTGAATGTCATTTACTTCGAGTGAAAATCATGAAAAGCAACCTCTCTT
AACATCCGAATCTAGTCAAAACTATCATAAACGCCATGGAACCAATGAGA
GCCTTGAAGGTTCTCACTTTGTGGAAGTCAACCCTGGCGGCCTTTCCGTT
ATCAAATGCGCAATTTTTATCATCGCTCAGATGGCTGGTAGCGGAATTCT
TGCATTACCAGATGCCGTGAGTGGAACTGGGTGGACCGGTATTTTCCTTA
TCGCGGCTTTGGGGAGTCTAGCTTGTTATTGTGGAACTATGCTGGGTAAA
TGTTGGGTGATTATCCGGCGTGATAACAACATACCGGGTCATGTCCGGGA
TCCTTACCCTTTGATTGGATATTATGCTGgaggaaaaaaagggaaatatg
TTGTAGAATTCTGTGTTATGATCACACTATTGGGTGCTTCCGTTGTTTTT
CTGTTGCTGTCTGCTAGGGAAGTATCATCCATTCTGGACGTTTCAATTGG
TTCGTTCAATACACAGAAAACTGAGTTCCGCATTTGGTTGTTGGTCATTG
GGGGGATTCTCATCCCATGCACTTGGTTCGCTTCTCCCAAAGAAATGTGG
TTGTTTGCTTACGGTGCCAGTTTGTGCACCATTATCGCTTGTTGGATGAT
CGTTATCAGAGCTTGTATGCAAATCGCTCGAGATGGTATCGCTCCGGCTT
CTGCACGTAAGGACCCTTCAGCTGAAGGTTTCTTCAACGCGTTCGGGACG
ATCGCTTTCGCTTTTGGAGGAGGTGCAATCTTTCCAACCTTTCAAGCTGA
CATGGAAAAACCAAGTAAATTTGTTTACTCAGCAATATTAGGTTTTGCAG
GTGTTCTTTCTTTATACATGCCAGTGGCCATACTTCCATATATTGGACTT
GGTAGCAACCTGGATACAAACATCTTAACCACTATGAAGAATCTGGAAGG
TGATGGTCACACTTTGATTCTAGCAGCTGAATGTTTGATCACTTTTCACT
TGTTATTCGCTGTAATCATCTTGAATAATCCAATTTCACAACAGATCGAA
GAACACATTGGCATCGAACACAAGTTTGGTTGGAGGAGAATTTTATGTCG
TTCAGGAATAATGTTACTGGTGATGGGATTGGCGGAACTTTTCCCGAACT
TTGGACCAGTTCTTTCTTTCATAGGAGCATCTACAGTCACAATGATGTCA
TTCATTTTACCAGCAATCTTCTACCTTTCTTTACAACACTCAGAACTAGT
TCCTCTACATCAAAAGGTGTTCCACTACGAGATCATTTTAATCTCGCTCA
TATTTGGTTGTGCTGGTATTTATTCTTCAGTTCAAGGGTTCTCCAACCCA
TTCAAAGCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00067086-exon-scaffold_463-1491911889:241735..242983 | TCONS_00067086-exon-scaffold_463-1491911889:241735..242983 | Clytia hemisphaerica | exon |
| TCONS_00067086-exon-scaffold_463-1510915933:241735..242983 | TCONS_00067086-exon-scaffold_463-1510915933:241735..242983 | Clytia hemisphaerica | exon |
| TCONS_00067086-exon-scaffold_463-1575043694:241735..242983 | TCONS_00067086-exon-scaffold_463-1575043694:241735..242983 | Clytia hemisphaerica | exon |
| TCONS_00067086-exon-scaffold_463-1491911889:243368..244516 | TCONS_00067086-exon-scaffold_463-1491911889:243368..244516 | Clytia hemisphaerica | exon |
| TCONS_00067086-exon-scaffold_463-1510915933:243368..244516 | TCONS_00067086-exon-scaffold_463-1510915933:243368..244516 | Clytia hemisphaerica | exon |
| TCONS_00067086-exon-scaffold_463-1575043694:243368..244516 | TCONS_00067086-exon-scaffold_463-1575043694:243368..244516 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| scaffold_463 | supercontig | scaffold_463:241735..244516 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR013057 | AA_transpt_TM |
Blast
The following BLAST results are available for this feature:
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