TCONS_00067068 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067068
Unique NameTCONS_00067068
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length411

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067068 ID=TCONS_00067068|Name=TCONS_00067068|organism=Clytia hemisphaerica|type=transcript|length=411bp
GCAGTGAACGTGGACCACCTTATTCTGAAGAAGGGGAGCCCATCGTTTCA
GGGCAAGGACAACACATAAGGCCTCCTTGTAATTGATGTGAGAACCAGAA
GGGGTGGGTAGTCAACCAGGAGGTTGGAGTAGAACCAATCTCCTTGAAAC
TCAGCTCCAATACCTGTAGAGCATGCATCAGTATGTAGGTCAACAACCGG
GCGGGGGTCATGAAAACGACAGAACCCATTGAAGACCTCAAAGAACTGAA
GCCACCAATCAATGTCTTCGAGAAACTCCCCACTAAGACGACACTTTGCA
GATTGCTTCGGCAGAGTGTTCATCAAGTCCAGGATCCTACGAAGAAATAT
CCTACCACCAAAGACAACCTTACAGGCCCAATTTAAGCGTCCGGCTTACT
GCTGGAGTTGT
Run BLAST on NCBI

transcript from alignment at scaffold_462:970695..971105

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067068 ID=TCONS_00067068|Name=TCONS_00067068|organism=Clytia hemisphaerica|type=transcript|length=411bp|location=Sequence derived from alignment at scaffold_462:970695..971105 (Clytia hemisphaerica)
ACAACTCCAGCAGTAAGCCGGACGCTTAAATTGGGCCTGTAAGGTTGTCT
TTGGTGGTAGGATATTTCTTCGTAGGATCCTGGACTTGATGAACACTCTG
CCGAAGCAATCTGCAAAGTGTCGTCTTAGTGGGGAGTTTCTCGAAGACAT
TGATTGGTGGCTTCAGTTCTTTGAGGTCTTCAATGGGTTCTGTCGTTTTC
ATGACCCCCGCCCGGTTGTTGACCTACATACTGATGCATGCTCTACAGGT
ATTGGAGCTGAGTTTCAAGGAGATTGGTTCTACTCCAACCTCCTGGTTGA
CTACCCACCCCTTCTGGTTCTCACATCAATTACAAGGAGGCCTTATGTGT
TGTCCTTGCCCTGAAACGATGGGCTCCCCTTCTTCAGAATAAGGTGGTCC
ACGTTCACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041907XLOC_041907Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067068-exon-scaffold_462-1491911889:970695..971105TCONS_00067068-exon-scaffold_462-1491911889:970695..971105Clytia hemisphaericaexon
TCONS_00067068-exon-scaffold_462-1510915933:970695..971105TCONS_00067068-exon-scaffold_462-1510915933:970695..971105Clytia hemisphaericaexon
TCONS_00067068-exon-scaffold_462-1575043694:970695..971105TCONS_00067068-exon-scaffold_462-1575043694:970695..971105Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:970695..971105 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.351265	0	0.438797	0	1.0624	0.213899	0.242785	0.224747	0.313008	0.652136	1.02181	1.38022	0.924456	0.482712	0.799522	0.334679	0	0.448352	0	0.727083	1.2977	0	0.327577	0.569599	0	0.168293	0.265322	0.835179	0.194938	0.415744
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067068 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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