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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067060 ID=TCONS_00067060|Name=TCONS_00067060|organism=Clytia hemisphaerica|type=transcript|length=1296bp
TGTTCTTGGTAAAATTTACACTATTTACATAAATATTTTCTACATAAAAT
CGTCGATAAAGTTTTATAAGAGCCTGCtccataaaaaaaatcaaacaatc
cgTCACATACGAAGATATAAGAAAAATCTAGTAAATCTAAATACAGCAAA
GTCCTGTCTCAGTTTCAGTGTTTCTACACTCCTTGTCCGTTTAAAAGCCT
AACTGAAAATAAAGTTAACGGATTTTAGCACCCTGCAAAAATTTTTACTA
CGACTTTTGGGAGCGATAGTATCATTAAAAAGcaaactaagggactgggt
tcgaggtTGGAGTTTGATCAAAATATTGCAAACTTCTTCCATTGTAAACA
ATAAATCGACACTTAAAAGCTAATGCCTTCCCAAAGCGCCAACAGAATTC
TTTTCCAATGATGTAAAAGCTGAGAAAGTgtaaatatgtaaatttcaaaa
aaattgtccaggTACTGAGACAGGATAAACTTAAAACTCTACAAAAAGTT
CGagataaaatattattttcatttttcaacacAAAACTTCAATTAAAATC
ACATATATATTCACATTACAAGTTTATTTTCTCGCTTTATCGCACTTCGT
AATTTCAACCAATTCAACAGGCTTGCtacaagaaaatctaaaatctaacT
TATCTATTATTTTTCCTCTCTTGGAAGCTCTACCACAAATCATTCAAGTT
CTTTGTAGTATGGGTGATTATGTATGAGTGCGTGCACATTGAAGCACACC
CATCCTTATCGGTTCCCACTTCAAATTTAGTCAATTTTCTTAAACCAATT
TACAATCAACCTTTTCAAACAGGGATAGGTTTAAAACcagtcaaaacaaa
atttctcgTTTTATCACTCTGCTCTTGCTGTTGACATGATGTTCTCGATT
TTGTTGAATGTGTTTGTTGAATGTGATCATTTTCAACATGTTCCAAAATG
CTTTCAACAGATTGTCTCGACTCAACAGGGAGCTCAGCATACATTTGTAA
AGATACACGGCGAATTGCTTTCCgataaaaattgtttgtttCCTTGGTAA
CCATTTTGGATTTGCTCGCACAGAAAGGGTCATAAGAATGGGACCGAGTT
AAACTTTTCTTGTTTAGGGATGGCATCATTGAATCTCTGTAAACCATTAC
GAGCATTGGTGTTGTGGTAGAATGTTTGACGTATTAAAAAAAATGGTATC
CTTGATATTGTAATTGAATTGGTCTTGCAATGTTTTGATGCAGttatttt
tgtagtttttatgctgaaaatgtaaaatatattaTTTGAATAAACC Run BLAST on NCBI protein sequence of TCONS_00067060-protein >TCONS_00067060-protein ID=TCONS_00067060-protein|Name=TCONS_00067060-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
MLVMVYRDSMMPSLNKKSLTRSHSYDPFCASKSKMVTKETNNFYRKAIRR
VSLQMYAELPVESRQSVESILEHVENDHIQQTHSTKSRTSCQQQEQSDKT
RNFVLTGFKPIPV Run BLAST on NCBI transcript from alignment at scaffold_462:876732..878027 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067060 ID=TCONS_00067060|Name=TCONS_00067060|organism=Clytia hemisphaerica|type=transcript|length=1296bp|location=Sequence derived from alignment at scaffold_462:876732..878027 (Clytia hemisphaerica)
GGTTTATTCAAAtaatatattttacattttcagcataaaaactacaaaaa
taaCTGCATCAAAACATTGCAAGACCAATTCAATTACAATATCAAGGATA
CCATTTTTTTTAATACGTCAAACATTCTACCACAACACCAATGCTCGTAA
TGGTTTACAGAGATTCAATGATGCCATCCCTAAACAAGAAAAGTTTAACT
CGGTCCCATTCTTATGACCCTTTCTGTGCGAGCAAATCCAAAATGGTTAC
CAAGGaaacaaacaatttttatcGGAAAGCAATTCGCCGTGTATCTTTAC
AAATGTATGCTGAGCTCCCTGTTGAGTCGAGACAATCTGTTGAAAGCATT
TTGGAACATGTTGAAAATGATCACATTCAACAAACACATTCAACAAAATC
GAGAACATCATGTCAACAGCAAGAGCAGAGTGATAAAAcgagaaattttg
ttttgactgGTTTTAAACCTATCCCTGTTTGAAAAGGTTGATTGTAAATT
GGTTTAAGAAAATTGACTAAATTTGAAGTGGGAACCGATAAGGATGGGTG
TGCTTCAATGTGCACGCACTCATACATAATCACCCATACTACAAAGAACT
TGAATGATTTGTGGTAGAGCTTCCAAGAGAGGAAAAATAATAGATAAgtt
agattttagattttcttgtaGCAAGCCTGTTGAATTGGTTGAAATTACGA
AGTGCGATAAAGCGAGAAAATAAACTTGTAATGTGAATATATATGTGATT
TTAATTGAAGTTTTgtgttgaaaaatgaaaataatattttatctCGAACT
TTTTGTAGAGTTTTAAGTTTATCCTGTCTCAGTAcctggacaattttttt
gaaatttacatatttacACTTTCTCAGCTTTTACATCATTGGAAAAGAAT
TCTGTTGGCGCTTTGGGAAGGCATTAGCTTTTAAGTGTCGATTTATTGTT
TACAATGGAAGAAGTTTGCAATATTTTGATCAAACTCCAacctcgaaccc
agtcccttagtttgCTTTTTAATGATACTATCGCTCCCAAAAGTCGTAGT
AAAAATTTTTGCAGGGTGCTAAAATCCGTTAACTTTATTTTCAGTTAGGC
TTTTAAACGGACAAGGAGTGTAGAAACACTGAAACTGAGACAGGACTTTG
CTGTATTTAGATTTACTAGATTTTTCTTATATCTTCGTATGTGAcggatt
gtttgattttttttatggaGCAGGCTCTTATAAAACTTTATCGACGATTT
TATGTAGAAAATATTTATGTAAATAGTGTAAATTTTACCAAGAACA Coding sequence (CDS) from alignment at scaffold_462:876732..878027 >TCONS_00067060 ID=TCONS_00067060|Name=TCONS_00067060|organism=Clytia hemisphaerica|type=CDS|length=342bp|location=Sequence derived from alignment at scaffold_462:876732..878027 (Clytia hemisphaerica)
ATGCTCGTAATGGTTTACAGAGATTCAATGATGCCATCCCTAAACAAGAA
AAGTTTAACTCGGTCCCATTCTTATGACCCTTTCTGTGCGAGCAAATCCA
AAATGGTTACCAAGGaaacaaacaatttttatcGGAAAGCAATTCGCCGT
GTATCTTTACAAATGTATGCTGAGCTCCCTGTTGAGTCGAGACAATCTGT
TGAAAGCATTTTGGAACATGTTGAAAATGATCACATTCAACAAACACATT
CAACAAAATCGAGAACATCATGTCAACAGCAAGAGCAGAGTGATAAAAcg
agaaattttgttttgactgGTTTTAAACCTATCCCTGTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067060-exon-scaffold_462-1491911889:876732..878027 | TCONS_00067060-exon-scaffold_462-1491911889:876732..878027 | Clytia hemisphaerica | exon |
| TCONS_00067060-exon-scaffold_462-1510915933:876732..878027 | TCONS_00067060-exon-scaffold_462-1510915933:876732..878027 | Clytia hemisphaerica | exon |
| TCONS_00067060-exon-scaffold_462-1575043694:876732..878027 | TCONS_00067060-exon-scaffold_462-1575043694:876732..878027 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:876732..878027 . |
Blast
The following BLAST results are available for this feature:
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