TCONS_00066972 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066972
Unique NameTCONS_00066972
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2834

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066972 ID=TCONS_00066972|Name=TCONS_00066972|organism=Clytia hemisphaerica|type=transcript|length=2834bp
GAAATGTGTGTTGATTAATAAAGTAGGGTGTGTTTTAAAAGGAATGTCGT
CGTTCACGGGTTGGGAAAGATGATAAGGgagagaaagaagaaaaactgat
tgaggttttgaattttttccccAGCCAAGTAATTTTATTTCAGGTTCAAA
CTTATCTTTCGCTTGCGAAAATATAGCACAGCAGCTGAGCAATGCAACAG
CACAGTAAAGGCACCATAGCTCGAAAGACAAGGGGCCGGAATAGTTATAT
TTGTGGGAGATGGCTCACAAAATAAGCTAAAAATACTGTTCGAGTTAATG
TACTACGGAGGTTCAGTTACAGAgggttttataaaaagttttcacgatac
catgaatttttttgagttaAGATGACATTCGAGATATAAAGGTTGGAGTA
ACGGTGAACTTTACTGTTCCATATTTGTTTTATgtagatcaatgttttga
aaaacacGCAAATTTGGTAAATTAGCTAATAGCAAATTTGAAACCAATGA
AATTAGcatggaaattcatgattttcttttcattgatGGTGGCCAATGGA
AAAGCTGAATTTACCATCAGGCGTGGTGAGAGTGGAATCCCTGATGTTGT
GGTGAAAGATTCACAACAGATGAATTGTACAAAGGATAACCCAACAGCAA
TACCGATATCCAGTGAAGACTTTAAATGTGTGAATCTTACAGCCTTATCA
GAAGAGGGATGTAGTAGCTTTATAACGGCTAGAGGACGACAATGTATTAA
TGTCACAGGAATAGAAACAATCAAAGCCGTCAAAAACGTCGTTCAAAACA
CTGCTACTCGAAAATGGAAGTGGGATACTCTGATTGACGAGAATTCAATC
TATGGAGACGTACTAACAAAGGATGGTGATGAGATCTGCTTCAATACAAA
TGTTACATACTGGAGTGGACAACTGCTACAATTGTGGTACAGGACGAGTC
AAACAAATGAGCAATGTGCAATTGTCAAGATACCAGGCGAACGAACATAT
CCAGCCAATTTAAATGAACAAGATTTCACAATCCAAGTCAAAAGAATCCC
TACTTCTGCTTCTACACAAGATGAGATGACAAAACTACaggaaactcaaa
aagtcacCGAAGCTGCTCTAACCAAACCTCAACCATTGACTACATCGACA
GAACCTGAAACAACGAGCTTAAGCCTTTTAACCAATCTTGATCAAGATAT
ACCTGCAAAACTATCGAGTTTGAGCATCAATGAGACAACAGAAACACCAT
TAACTCAAAAAGTCACCGAAGCTGCTTCAACCACACCTAAACCATCGACT
ACATCGGCAGAACCTAAAACAACGAGCTTAAGTCTTTTAACCAATCATGA
TCAAAACATACCAGCAAAACTATCGAGTTTGAGCATCAAGGAGACAACAG
AAACACCACCAACTAAAAAGCCAGCAAAGAAGAAAGCTTCATTCAAATGG
AACGAATGGAACGTCACCTTAGTCATCTTCATGGCAATCGTGTGGCCGTT
AGATGTCATCTTGATCGGTATTTGTCTTCGACGTTGCATAATGAAATATT
GGGATAGAGCTGGGAACCACTTGCAATTGAGTCGGAAAACCTATCATTAC
ACCAGACAGATGATGTAGAGTTTCACGCACTtgCCAATCATAAAAAAGAC
AAAGACGAGGAAAAGAATTATGAATTAGTTGACGACAGAAGACAAAGACA
TCGAAACGCAAACGATGACATCGAAGCACCCTTACTTGAcagtaataaaa
acaaacagaaacgAAGGAACCAAGATACTGACTTATACGATCTTGTTCAT
GGGGAAGACGAACAATCGGTAGGATCTTTTGATAACGATCAAGAAGACAT
TGAGCAATACCAACCAACCAAGAAATATGTCAACATTAAGAACTATGAGA
ATGTGAACAATATTCCTGATCAAAGTACCAATCCAATAGACCATTCACCT
TATGAAGATATCACCAACGAGAAAGTGGCTCTCATTTCTGGTAACGATGA
CTCCATTCCTCATTATGACCCGAATAAACGTCAGCAGCTTAATAAGGTTG
TGAAGCCGCACCGAGAAGTTGATGCCGTACCTCTTTACCAGCCTAGTGTT
TCTGAAAACAACTACGAAACTTTACCAAACTCCCCTCAAAATGCACCTCC
ACTAGCTCCAAGAACTGCTCCTTCAACGAAACAACCAGAAAATGCGTACG
AGCCTGTACCTAATCAAATGAGGAAGCCTGTACCATACTACCAGCCTGGA
AACGGAAAATCTTCAAGCAATTATGATACTATTGAGCAAAATTTGAATCA
GAAAACTGGAAATAATACTTCAACTTATGAGCCTGTTGAAAAGTACACCA
CATCATCTAGTAATCATTACGACAGAATTAAGGGATGTGCTAGGATAGAG
GATGAGAATGGAGTTGTTCCACAGTATACTCACATAGGAAAAACACCGCC
ACAGGGAGGTTTTGATGATGGTATTTATGATTCTGTCGCTGATAAACCGA
ACGAACCAGATCATATTAAGGACTTATACGCCGTTGTCGATAAATCACGT
ATCAACAAGTAAAAATGATGAATAAGAAGAATCTATAGGGACTTGGAAAG
GATttatttatcaatattttgcTATCTTTTTGGGTGggtctttttacctt
ttttagcgcgtttctttttgtaaatattttcttgagaTAACCTAGATTAT
ATACGTCTGCATCTTTtaccccttttttatttttttaacatttttatttt
agattttttttgtacaaaatagTTATGAGTGAAAACAGAAAACGCCATTA
CAAAGTAATCATGGCCCATAAATGTCAGAAATTT
Run BLAST on NCBI

protein sequence of TCONS_00066972-protein

>TCONS_00066972-protein ID=TCONS_00066972-protein|Name=TCONS_00066972-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MKLAWKFMIFFSLMVANGKAEFTIRRGESGIPDVVVKDSQQMNCTKDNPT
AIPISSEDFKCVNLTALSEEGCSSFITARGRQCINVTGIETIKAVKNVVQ
NTATRKWKWDTLIDENSIYGDVLTKDGDEICFNTNVTYWSGQLLQLWYRT
SQTNEQCAIVKIPGERTYPANLNEQDFTIQVKRIPTSASTQDEMTKLQET
QKVTEAALTKPQPLTTSTEPETTSLSLLTNLDQDIPAKLSSLSINETTET
PLTQKVTEAASTTPKPSTTSAEPKTTSLSLLTNHDQNIPAKLSSLSIKET
TETPPTKKPAKKKASFKWNEWNVTLVIFMAIVWPLDVILIGICLRRCIMK
YWDRAGNHLQLSRKTYHYTRQMM
Run BLAST on NCBI

transcript from alignment at scaffold_462:256022..261440-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066972 ID=TCONS_00066972|Name=TCONS_00066972|organism=Clytia hemisphaerica|type=transcript|length=5419bp|location=Sequence derived from alignment at scaffold_462:256022..261440- (Clytia hemisphaerica)
GAAATGTGTGTTGATTAATAAAGTAGGGTGTGTTTTAAAAGGAATGTCGT
CGTTCACGGGTTGGGAAAGATGATAAGGGAGAGAAAGAAGAAAAACTGAT
TGAGGTTTTGAATTTTTTCCCCAGCCAAGTAATTTTATTTCAGGTTCAAA
CTTATCTTTCGCTTGCGAAAATATAGCACAGCAGCTGAGCAATGCAACAG
CACAGTAAAGGCACCATAGCTCGAAAGACAAGGGGCCGGAATAGTTATAT
TTGTGGGAGATGGCTCACAAAATAAGCTAAAAATACTGTTCGAGTTAATG
TACTACGGAGGTTCAGTTACAGAGGGTTTTATAAAAAGTTTTCACGATAC
CATGAATTTTTTTGAGTTAAGATGACATTCGAGATATAAAGGTTGGAGTA
ACGGTGAACTTTACTGTTCCATATTTGTTTTATGTAGATCAATGTTTTGA
AAAACACGCAAATTTGGTAAATTAGCTAATAGCAAATTTGAAACCAATGA
AATTAGCATGGAAATTCATGATTTTCTTTTCATTGATGGTGGCCAATGGA
AAAGCTGAATTTACCATCAGGCGTGGTGAGAGTGGAATCCCTGATGTTGT
GGTGAAAGATTCACAACAGATGAATTGTACAAAGGATAACCCAACAGCAA
TACCGATATCCAGTGAAGACTTTAAATGTGTGAATCTTACAGCCTTATCA
GAAGGTAAACTTAAAGTAAAGTTAGATAGCGGTAAAAATGTTTTGAAATT
ATCTGGCTTTTCAATCTTGCTTGAGTCAAGTCACGTTTACTTTGCCTGGC
TACTCAAGCCATTATCAAATGATTGCATTATCGCAAACCTCATTCACTTG
GCATTTTATTTCTTATAGAGGGATGTAGTAGCTTTATAACGGCTAGAGGA
CGACAATGTATTAATGTCACAGGAATAGAAACAATCAAAGCCGTCAAAAA
CGTCGTTCAAAACACTGCTACTCGAAAATGGAAGTGGGATACTCTGATTG
ACGAGAATTCAATCTATGGAGACGTACTAACAAAGGATGGTGATGAGATC
GTAAGTATATCTGAATATATGTTCAACAACATAAGCACCGTCTGAATAAA
CGCTCTCTGTAGGAGAGGTGTTTCTTTCAAATAAGTAGCTGTAAAGAATC
GTCATATAAAGGAAAACTTTGTTGAAAATATTTAATAAACGCCCCTTGAA
ATGCCCAAAATGGTCATTGTTATCATTTGAGAACGATAAGAATACAATCG
GACTAGGGCGCCAACTAAATTCTAAAAATTAAAGGATCCGTCCTATTATA
TATAAAATAAACGAGCTAACAAATTTTTCTGTAGTGCTTCAATACAAATG
TTACATACTGGAGTGGACAACTGCTACAATTGTGGTACAGGACGAGTCAA
ACAAATGAGCAATGTGCAATTGTCAAGATACCAGGCGAACGAACATGTAA
AGGCTGTTCTTATCTATTTTTTGAGCCTCAAATTGTTCATATCATGTTCT
TATTTTTGGGCTTTGTACCCTATTTTTACTACTTTGACCATAATTTCAGA
CAAACATTCAGGTTCTCCATCGTTTTTGAACTGTTCTTATTTTTGGCCTT
TTTTGAACATCGTTGTTCTTATAAAAATGTTCTTTAAAAAATGAGAGTAT
CCAATTAGGCAATAATTTCATATTTATCTCATCACACAGATCCAGCCAAT
TTAAATGAACAAGATTTCACAATCCAAGTCAAAAGAATCCCTACTTCTGC
TTCTACACAAGATGAGATGACAAAACTACAGGAAACTCAAAAAGTCACCG
AAGCTGCTCTAACCAAACCTCAACCATTGACTACATCGACAGAACCTGAA
ACAACGAGCTTAAGCCTTTTAACCAATCTTGATCAAGATATACCTGCAAA
ACTATCGAGTTTGAGCATCAATGAGACAACAGAAACACCATTAACTCAAA
AAGTCACCGAAGCTGCTTCAACCACACCTAAACCATCGACTACATCGGCA
GAACCTAAAACAACGAGCTTAAGTCTTTTAACCAATCATGATCAAAACAT
ACCAGCAAAACTATCGAGTTTGAGCATCAAGGAGACAACAGAAACACCAC
CAACTAAAAAGCCAGCAAAGAAGAAAGCTTCATTCAAATGGAACGAATGG
AACGTCACCTTAGTCATCTTCATGGCAATCGTGTGGCCGTTAGATGTCAT
CTTGATCGGTATTTGTCTTCGACGTTGCATAATGAAATATTGGTGAGAAA
AATAATCTTCAAATTTAAGTAGTTTTCTTGTTTGCTGAAGCTATGCCCGC
CATTTCCCGTATTTAATCGCCAAGGTTGTGTCTGCAATTATTAATGAAAA
TGTTCGGATTGGAAGAGCAATTCTTAATGAAGTTCAAATGTCTGTTTCCA
TAATGGCAGAACTGAACCCCAAACTTGAAACAACTTCTTATAGACCGAAT
CCGCAAAGTTCTGTTAGGAAAGGTTTTCAACCAAAACTCAAGCAGGTTGT
CCGTTCCACCCACAACCAAAAACAAGCAACAAAACTATGCGCAGGTCAAT
AAATAAATTTACAGTCTTGAGATGTAACTAAAAAGATATAACGTAACACG
GAATCGGTCTATACAATAAGCTTATTTCAAAACTCTGAAACAGCTAAATT
CTCGCATCAAACTTTACGCTTGCAATTTTTAGTGCATGGCAATAATTAAA
TTATGAACTAATTTTTCTCCTTTCCTTTTTTCTTCACATTTTACTGATTT
TGAAAAATTTCTTGAAATTCTACATCCATCTTTTTTTTCTCAATTCGAAA
GATTATTCTTGCAAATCTCCATTTTTTTTCATTTGACGTATCAGGGATAG
AGCTGGGAACCACTTGCAATTGAGTCGGAAAACCTATCATTACACCAGAC
AGATGATGTAGAGTTTCACGCACTGTAAGCCTAAAATTTGATCCTAATCT
TTCACTTTTCTTTTCTTTTCTTTTCTTATTTTCTTCATACATCCAAACTA
AACCTTCTTCTATAATTGGCTTTTCCAAATAAACAAAAACGTATACCCCA
TGTTGAGGAGGTCCAAGGAGGTCTTATGTGGTCAAACTTTATAGTAATTT
ACAAAAGTTGGTCAAAAATACCAGGNGAGGTCCAAGGAGGTCTTATGTGG
TCAAACTTTATAGTGACTTATAAAAGTTGGTCAAAAATACCTGGAATTCA
ATGGTGTTTAAACTAGAAATTACCTGGAATTCCAGAGGGCTAGATTATTT
CCGGCTACAAAGGGGTTGGACCTCTTCAACAGGGGTTAGTTATATGGTTT
TGACCTAGAAAAACCCATTATTATAATAAACTTTTTTCAAAAAATCAATT
TTGAGATAGAAAACAATACCGTAAATCACCGATTAAGCGCCCGGGCGCTT
ATTTAATTTTTCAGGCTCTGAGGGGGGCGCTTATTCAAGCGGGGCACTTA
TTCAAGCGGGGCGCTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGAAGA
GAAATTCTTATCCCGGAAATTAGCCTAGGCCACCAATTCGAATAAGCGCC
CCTCCCTGGAGGGGGCGCTTATTCAAAGGGGGGCGCTTATTTGAGCGGGG
CGCTTATAAAATTATTTTAACTAAATGGGGGGCGCTTATTCGAGCGGGGC
GCTAATTCAAGCGGGGCGCTTAATCGGTGATTTACTTGTTTTTCTTTCTT
TCAGTGCCAATCATAAAAAAGACAAAGACGAGGAAAAGGTAATAGAGCTT
CTTCACTTTATCATGGAAACACATGTACGTTAGTATGTCTCACTCTACCC
AAGGCTATCTAATTGAGATCTAAATCAAATGAAAAAAATAAAAAAAGCGA
AGCCTAACTATATAGAAATAAATCGCCGTCAAAATTTCAGCGAGTTATCA
AATCGGCGTAATCTATAAATGAACAGTGATATTTTGATACCAAAGTTGAC
AGTGCAGAACACAAAAAGAAAGTATTTTCTATTTCTGTATAATTTTATAG
AATTATGAATTAGTTGACGACAGAAGACAAAGACATCGAAACGCAAACGA
TGACATCGAAGCACCCTTACTTGACAGTAATAAAAACAAACAGAAACGAA
GGAACCAAGATACTGACTTATACGATCTTGTTCATGGGGAAGACGAACAA
TCGGTAGGATCTTTTGATAACGATCAAGAAGACATTGAGCAATACCAACC
AACCAAGAAATATGTCAACATTAAGAACTATGAGAATGTGAACAATATTC
CTGATCAAAGTACCAATCCAATAGACCATTCACCTTATGAAGATATCACC
AACGAGAAAGTGGCTCTCATTTCTGGTAACGATGACTCCATTCCTCATTA
TGACCCGAATAAACGTCAGCAGCTTAATAAGGTTGTGAAGCCGCACCGAG
AAGTTGATGCCGTACCTCTTTACCAGCCTAGTGTTTCTGAAAACAACTAC
GAAACTTTACCAAACTCCCCTCAAAATGCACCTCCACTAGCTCCAAGAAC
TGCTCCTTCAACGAAACAACCAGAAAATGCGTACGAGCCTGTACCTAATC
AAATGAGGAAGCCTGTACCATACTACCAGCCTGGAAACGGAAAATCTTCA
AGCAATTATGATACTATTGAGCAAAATTTGAATCAGAAAACTGGAAATAA
TACTTCAACTTATGAGCCTGTTGAAAAGTACACCACATCATCTAGTAATC
ATTACGACAGAATTAAGGGATGTGCTAGGATAGAGGATGAGAATGGAGTT
GTTCCACAGTATACTCACATAGGAAAAACACCGCCACAGGGAGGTTTTGA
TGATGGTATTTATGATTCTGTCGCTGATAAACCGAACGAACCAGATCATA
TTAAGGACTTATACGCCGTTGTCGATAAATCACGTATCAACAAGTAAAAA
TGATGAATAAGAAGAATCTATAGGGACTTGGAAAGGATTTATTTATCAAT
ATTTTGCTATCTTTTTGGGTGGGTCTTTTTACCTTTTTTAGCGCGTTTCT
TTTTGTAAATATTTTCTTGAGATAACCTAGATTATATACGTCTGCATCTT
TTACCCCTTTTTTATTTTTTTAACATTTTTATTTTAGATTTTTTTTGTAC
AAAATAGTTATGAGTGAAAACAGAAAACGCCATTACAAAGTAATCATGGC
CCATAAATGTCAGAAATTT

Coding sequence (CDS) from alignment at scaffold_462:256022..261440-

>TCONS_00066972 ID=TCONS_00066972|Name=TCONS_00066972|organism=Clytia hemisphaerica|type=CDS|length=5610bp|location=Sequence derived from alignment at scaffold_462:256022..261440- (Clytia hemisphaerica)
GGATAGAGCTGGGAACCACTTGCAATTGAGTCGGAAAACCTATCATTACA
CCAGACAGATGATGTAGATCCAGCCAATTTAAATGAACAAGATTTCACAA
TCCAAGTCAAAAGAATCCCTACTTCTGCTTCTACACAAGATGAGATGACA
AAACTACAGGAAACTCAAAAAGTCACCGAAGCTGCTCTAACCAAACCTCA
ACCATTGACTACATCGACAGAACCTGAAACAACGAGCTTAAGCCTTTTAA
CCAATCTTGATCAAGATATACCTGCAAAACTATCGAGTTTGAGCATCAAT
GAGACAACAGAAACACCATTAACTCAAAAAGTCACCGAAGCTGCTTCAAC
CACACCTAAACCATCGACTACATCGGCAGAACCTAAAACAACGAGCTTAA
GTCTTTTAACCAATCATGATCAAAACATACCAGCAAAACTATCGAGTTTG
AGCATCAAGGAGACAACAGAAACACCACCAACTAAAAAGCCAGCAAAGAA
GAAAGCTTCATTCAAATGGAACGAATGGAACGTCACCTTAGTCATCTTCA
TGGCAATCGTGTGGCCGTTAGATGTCATCTTGATCGGTATTTGTCTTCGA
CGTTGCATAATGAAATATTGTGCTTCAATACAAATGTTACATACTGGAGT
GGACAACTGCTACAATTGTGGTACAGGACGAGTCAAACAAATGAGCAATG
TGCAATTGTCAAGATACCAGGCGAACGAACATAGGGATGTAGTAGCTTTA
TAACGGCTAGAGGACGACAATGTATTAATGTCACAGGAATAGAAACAATC
AAAGCCGTCAAAAACGTCGTTCAAAACACTGCTACTCGAAAATGGAAGTG
GGATACTCTGATTGACGAGAATTCAATCTATGGAGACGTACTAACAAAGG
ATGGTGATGAGATCATGAAATTAGCATGGAAATTCATGATTTTCTTTTCA
TTGATGGTGGCCAATGGAAAAGCTGAATTTACCATCAGGCGTGGTGAGAG
TGGAATCCCTGATGTTGTGGTGAAAGATTCACAACAGATGAATTGTACAA
AGGATAACCCAACAGCAATACCGATATCCAGTGAAGACTTTAAATGTGTG
AATCTTACAGCCTTATCAGAAGGGATAGAGCTGGGAACCACTTGCAATTG
AGTCGGAAAACCTATCATTACACCAGACAGATGATGTAGATCCAGCCAAT
TTAAATGAACAAGATTTCACAATCCAAGTCAAAAGAATCCCTACTTCTGC
TTCTACACAAGATGAGATGACAAAACTACAGGAAACTCAAAAAGTCACCG
AAGCTGCTCTAACCAAACCTCAACCATTGACTACATCGACAGAACCTGAA
ACAACGAGCTTAAGCCTTTTAACCAATCTTGATCAAGATATACCTGCAAA
ACTATCGAGTTTGAGCATCAATGAGACAACAGAAACACCATTAACTCAAA
AAGTCACCGAAGCTGCTTCAACCACACCTAAACCATCGACTACATCGGCA
GAACCTAAAACAACGAGCTTAAGTCTTTTAACCAATCATGATCAAAACAT
ACCAGCAAAACTATCGAGTTTGAGCATCAAGGAGACAACAGAAACACCAC
CAACTAAAAAGCCAGCAAAGAAGAAAGCTTCATTCAAATGGAACGAATGG
AACGTCACCTTAGTCATCTTCATGGCAATCGTGTGGCCGTTAGATGTCAT
CTTGATCGGTATTTGTCTTCGACGTTGCATAATGAAATATTGTGCTTCAA
TACAAATGTTACATACTGGAGTGGACAACTGCTACAATTGTGGTACAGGA
CGAGTCAAACAAATGAGCAATGTGCAATTGTCAAGATACCAGGCGAACGA
ACATAGGGATGTAGTAGCTTTATAACGGCTAGAGGACGACAATGTATTAA
TGTCACAGGAATAGAAACAATCAAAGCCGTCAAAAACGTCGTTCAAAACA
CTGCTACTCGAAAATGGAAGTGGGATACTCTGATTGACGAGAATTCAATC
TATGGAGACGTACTAACAAAGGATGGTGATGAGATCATGAAATTAGCATG
GAAATTCATGATTTTCTTTTCATTGATGGTGGCCAATGGAAAAGCTGAAT
TTACCATCAGGCGTGGTGAGAGTGGAATCCCTGATGTTGTGGTGAAAGAT
TCACAACAGATGAATTGTACAAAGGATAACCCAACAGCAATACCGATATC
CAGTGAAGACTTTAAATGTGTGAATCTTACAGCCTTATCAGAAGGGATAG
AGCTGGGAACCACTTGCAATTGAGTCGGAAAACCTATCATTACACCAGAC
AGATGATGTAGATCCAGCCAATTTAAATGAACAAGATTTCACAATCCAAG
TCAAAAGAATCCCTACTTCTGCTTCTACACAAGATGAGATGACAAAACTA
CAGGAAACTCAAAAAGTCACCGAAGCTGCTCTAACCAAACCTCAACCATT
GACTACATCGACAGAACCTGAAACAACGAGCTTAAGCCTTTTAACCAATC
TTGATCAAGATATACCTGCAAAACTATCGAGTTTGAGCATCAATGAGACA
ACAGAAACACCATTAACTCAAAAAGTCACCGAAGCTGCTTCAACCACACC
TAAACCATCGACTACATCGGCAGAACCTAAAACAACGAGCTTAAGTCTTT
TAACCAATCATGATCAAAACATACCAGCAAAACTATCGAGTTTGAGCATC
AAGGAGACAACAGAAACACCACCAACTAAAAAGCCAGCAAAGAAGAAAGC
TTCATTCAAATGGAACGAATGGAACGTCACCTTAGTCATCTTCATGGCAA
TCGTGTGGCCGTTAGATGTCATCTTGATCGGTATTTGTCTTCGACGTTGC
ATAATGAAATATTGTGCTTCAATACAAATGTTACATACTGGAGTGGACAA
CTGCTACAATTGTGGTACAGGACGAGTCAAACAAATGAGCAATGTGCAAT
TGTCAAGATACCAGGCGAACGAACATAGGGATGTAGTAGCTTTATAACGG
CTAGAGGACGACAATGTATTAATGTCACAGGAATAGAAACAATCAAAGCC
GTCAAAAACGTCGTTCAAAACACTGCTACTCGAAAATGGAAGTGGGATAC
TCTGATTGACGAGAATTCAATCTATGGAGACGTACTAACAAAGGATGGTG
ATGAGATCATGAAATTAGCATGGAAATTCATGATTTTCTTTTCATTGATG
GTGGCCAATGGAAAAGCTGAATTTACCATCAGGCGTGGTGAGAGTGGAAT
CCCTGATGTTGTGGTGAAAGATTCACAACAGATGAATTGTACAAAGGATA
ACCCAACAGCAATACCGATATCCAGTGAAGACTTTAAATGTGTGAATCTT
ACAGCCTTATCAGAAGGGATAGAGCTGGGAACCACTTGCAATTGAGTCGG
AAAACCTATCATTACACCAGACAGATGATGTAGATCCAGCCAATTTAAAT
GAACAAGATTTCACAATCCAAGTCAAAAGAATCCCTACTTCTGCTTCTAC
ACAAGATGAGATGACAAAACTACAGGAAACTCAAAAAGTCACCGAAGCTG
CTCTAACCAAACCTCAACCATTGACTACATCGACAGAACCTGAAACAACG
AGCTTAAGCCTTTTAACCAATCTTGATCAAGATATACCTGCAAAACTATC
GAGTTTGAGCATCAATGAGACAACAGAAACACCATTAACTCAAAAAGTCA
CCGAAGCTGCTTCAACCACACCTAAACCATCGACTACATCGGCAGAACCT
AAAACAACGAGCTTAAGTCTTTTAACCAATCATGATCAAAACATACCAGC
AAAACTATCGAGTTTGAGCATCAAGGAGACAACAGAAACACCACCAACTA
AAAAGCCAGCAAAGAAGAAAGCTTCATTCAAATGGAACGAATGGAACGTC
ACCTTAGTCATCTTCATGGCAATCGTGTGGCCGTTAGATGTCATCTTGAT
CGGTATTTGTCTTCGACGTTGCATAATGAAATATTGTGCTTCAATACAAA
TGTTACATACTGGAGTGGACAACTGCTACAATTGTGGTACAGGACGAGTC
AAACAAATGAGCAATGTGCAATTGTCAAGATACCAGGCGAACGAACATAG
GGATGTAGTAGCTTTATAACGGCTAGAGGACGACAATGTATTAATGTCAC
AGGAATAGAAACAATCAAAGCCGTCAAAAACGTCGTTCAAAACACTGCTA
CTCGAAAATGGAAGTGGGATACTCTGATTGACGAGAATTCAATCTATGGA
GACGTACTAACAAAGGATGGTGATGAGATCATGAAATTAGCATGGAAATT
CATGATTTTCTTTTCATTGATGGTGGCCAATGGAAAAGCTGAATTTACCA
TCAGGCGTGGTGAGAGTGGAATCCCTGATGTTGTGGTGAAAGATTCACAA
CAGATGAATTGTACAAAGGATAACCCAACAGCAATACCGATATCCAGTGA
AGACTTTAAATGTGTGAATCTTACAGCCTTATCAGAAGGGATAGAGCTGG
GAACCACTTGCAATTGAGTCGGAAAACCTATCATTACACCAGACAGATGA
TGTAGATCCAGCCAATTTAAATGAACAAGATTTCACAATCCAAGTCAAAA
GAATCCCTACTTCTGCTTCTACACAAGATGAGATGACAAAACTACAGGAA
ACTCAAAAAGTCACCGAAGCTGCTCTAACCAAACCTCAACCATTGACTAC
ATCGACAGAACCTGAAACAACGAGCTTAAGCCTTTTAACCAATCTTGATC
AAGATATACCTGCAAAACTATCGAGTTTGAGCATCAATGAGACAACAGAA
ACACCATTAACTCAAAAAGTCACCGAAGCTGCTTCAACCACACCTAAACC
ATCGACTACATCGGCAGAACCTAAAACAACGAGCTTAAGTCTTTTAACCA
ATCATGATCAAAACATACCAGCAAAACTATCGAGTTTGAGCATCAAGGAG
ACAACAGAAACACCACCAACTAAAAAGCCAGCAAAGAAGAAAGCTTCATT
CAAATGGAACGAATGGAACGTCACCTTAGTCATCTTCATGGCAATCGTGT
GGCCGTTAGATGTCATCTTGATCGGTATTTGTCTTCGACGTTGCATAATG
AAATATTGTGCTTCAATACAAATGTTACATACTGGAGTGGACAACTGCTA
CAATTGTGGTACAGGACGAGTCAAACAAATGAGCAATGTGCAATTGTCAA
GATACCAGGCGAACGAACATAGGGATGTAGTAGCTTTATAACGGCTAGAG
GACGACAATGTATTAATGTCACAGGAATAGAAACAATCAAAGCCGTCAAA
AACGTCGTTCAAAACACTGCTACTCGAAAATGGAAGTGGGATACTCTGAT
TGACGAGAATTCAATCTATGGAGACGTACTAACAAAGGATGGTGATGAGA
TCATGAAATTAGCATGGAAATTCATGATTTTCTTTTCATTGATGGTGGCC
AATGGAAAAGCTGAATTTACCATCAGGCGTGGTGAGAGTGGAATCCCTGA
TGTTGTGGTGAAAGATTCACAACAGATGAATTGTACAAAGGATAACCCAA
CAGCAATACCGATATCCAGTGAAGACTTTAAATGTGTGAATCTTACAGCC
TTATCAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041847XLOC_041847Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066972-exon-scaffold_462-1575043694:260737..261440TCONS_00066972-exon-scaffold_462-1575043694:260737..261440Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1575043694:260391..260572TCONS_00066972-exon-scaffold_462-1575043694:260391..260572Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1575043694:259995..260106TCONS_00066972-exon-scaffold_462-1575043694:259995..260106Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1575043694:259199..259751TCONS_00066972-exon-scaffold_462-1575043694:259199..259751Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1575043694:258517..258596TCONS_00066972-exon-scaffold_462-1575043694:258517..258596Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1575043694:257453..257486TCONS_00066972-exon-scaffold_462-1575043694:257453..257486Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1575043694:256022..257190TCONS_00066972-exon-scaffold_462-1575043694:256022..257190Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1510915933:260737..261440TCONS_00066972-exon-scaffold_462-1510915933:260737..261440Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1510915933:260391..260572TCONS_00066972-exon-scaffold_462-1510915933:260391..260572Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1510915933:259995..260106TCONS_00066972-exon-scaffold_462-1510915933:259995..260106Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1510915933:259199..259751TCONS_00066972-exon-scaffold_462-1510915933:259199..259751Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1510915933:258517..258596TCONS_00066972-exon-scaffold_462-1510915933:258517..258596Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1510915933:257453..257486TCONS_00066972-exon-scaffold_462-1510915933:257453..257486Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1510915933:256022..257190TCONS_00066972-exon-scaffold_462-1510915933:256022..257190Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1491911889:260737..261440TCONS_00066972-exon-scaffold_462-1491911889:260737..261440Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1491911889:260391..260572TCONS_00066972-exon-scaffold_462-1491911889:260391..260572Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1491911889:259995..260106TCONS_00066972-exon-scaffold_462-1491911889:259995..260106Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1491911889:259199..259751TCONS_00066972-exon-scaffold_462-1491911889:259199..259751Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1491911889:258517..258596TCONS_00066972-exon-scaffold_462-1491911889:258517..258596Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1491911889:257453..257486TCONS_00066972-exon-scaffold_462-1491911889:257453..257486Clytia hemisphaericaexon
TCONS_00066972-exon-scaffold_462-1491911889:256022..257190TCONS_00066972-exon-scaffold_462-1491911889:256022..257190Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066972-proteinTCONS_00066972-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:256022..261440 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0364524	0	4.28886	4.88662	2.84961	4.70315	1.73677	3.40895	9.70257	10.1134	8.78713	8.461	7.46847	8.30775	8.42208	8.13028	2.72066	5.16868	4.76375	5.93844	12.2649	7.19706	20.2575	22.5788	7.12749	4.84266
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066972 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top