TCONS_00066961 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066961
Unique NameTCONS_00066961
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2072

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066961 ID=TCONS_00066961|Name=TCONS_00066961|organism=Clytia hemisphaerica|type=transcript|length=2072bp
GAGTGAGGATGAATTGACAAATTAAAAAGTGATTAAAAATGATTGTTGAT
TAGCAATGTACAGTCTTAATAGAAGGAAGAAAGAAAAGCTATTAGATTGA
TACTTGTAGCaagccgaaaaaaaaatttctcccaCAGAAAAAAGACAGTA
AATTTGACAGCGTTGAGGAGATATGGGATATAATGGAGTTGCGAATCTAG
CTTTGGTGATTATATTGTTGAAATGTGTTACAGTTTTATCGGAATCGGTG
AGTTTTGAACGGAAACAGAATGtggatatttttaaaaataatggacGAAA
ATGCTACCAAATGGCAGCCAGTGTTTATGAGCAGGGCTGGTGTAAATGTG
ACtttgagaaaatgtttgttGGCGATAAATGCGTTGTAAAGAGAACCATG
AGTGCTTGCATCATGGCACAAGTAATAGATGTAGTCAATTTAAACATAGC
TGACATCAACTATATCACTGTTCTGGATTTCAATTTCGAAACCAAAGAAA
GCTTTTGGAATTATGCGTTTAGTGATAACATTATCAAACTGATCAGTGAA
AGTCAAGGTGTCTCCACCAACCTGAAAGTGGAACTTGCTGGGATGATCAT
GAAGATCGCATTGAATGGCAATCCGCAATGCATGATGGTTAAAATCTTAG
GTCCATCCAGATATCCAGTAGATCTTAGTCACCTTGGAGAATCGAACACT
GAATCAGATACTGcatcaaagaaaaaatatttaccaGAGATGGCAACAAC
TACATCGACCACCACagatgttttgaaaacgttGGAAAGTCAACAACCGA
ACAACCAAGATACAGAGAACAATATGTTTAATTCAACCACTGGGATTATT
GTTTCAACCATCGCAGCTTTGACATTGATTTTACTGGTAGTGGCAATCAT
TCTGTTTAAACGAAGCAAAATGAAAAGACGAAGAAATGATTCAGCTGCCA
GCATCGAGaCACCAGAGATTGCTTCCGTATGCTCGTTATCAAGTAAAATG
GATCCCACATTCTGTTCACCAGCATTAAGCAGACACAGTCTGGAAACGAT
TATCACAGACGGTAGCGACCAGGAATCGCAGAATGAGAATATTTACCAGC
AACCAGACGATGTCGTCAAATCGAACTCATACAAACGACATTCTAACATA
CCAGCTGCTTATTTCCAACAGATCAGTTTAGATTATGAAAATCCTGATGA
TGTGCGTCAACAAGTTGAGAATCTCAGCcctgaatatcatgaattagagA
TTGAAGATTTACAAAGAAGGCCAATGCCACAACGTAGAAACGATGAGATC
AACGACGATAATGTACAACAATGGAAACCAAAGTTACCAAGAAAGCCAAC
CATCCTCCAAAACATTCAAAGTAACCGACAATTGCTTAATAATGGTTCAT
TTGAATCTGATGAAGATTATTATAGTGAAGCTCTTGGAACTCCCAATCAA
GTTTCACCCGACCAATTCGAAGAATTGTACGCTAAAGTTGATAAATCACG
GAAGAGACAAAATAACAGTTAGAGTCTCATCATTTTtcgtgatcttcttc
ttcttctttttctcttgCTTCATTGAGAAACCACTTTCAAAATGTACATA
ATCTTCTGCTGtaaatctttctcaaattttatataattatttattttaaa
gGATTGTAAATATAACCTTAGTTTAACCATGGAGGTAATGAAATTATAGA
TGGAGAtaccactcctactattctattgtattgtatcgttgatagcaaac
tgttgctttgttgctttgggaaaaagcctttaattttgctttcgctcatg
ggaatacttgagtcgaagagaatttgaataaaatcacgctacatttttaa
tttgttcattgtgtgatgacaattttgtttataaaacataagaaaacctt
tcaagaataagcacagaacatcgaatttgaaatgttcacTGCTCAGGGAA
CCCTCcgcaaattttgtcaatttttacatatttactaatgcaaatctttc
aactatattctatcaaaattttgaggcagctgctattttagatctaaaga
tatttatagcaaagaaccttcc
Run BLAST on NCBI

protein sequence of Putative cnidarian restricted secreted protein

>TCONS_00066961-protein ID=TCONS_00066961-protein|Name=Putative cnidarian restricted secreted protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
MGYNGVANLALVIILLKCVTVLSESVSFERKQNVDIFKNNGRKCYQMAAS
VYEQGWCKCDFEKMFVGDKCVVKRTMSACIMAQVIDVVNLNIADINYITV
LDFNFETKESFWNYAFSDNIIKLISESQGVSTNLKVELAGMIMKIALNGN
PQCMMVKILGPSRYPVDLSHLGESNTESDTASKKKYLPEMATTTSTTTDV
LKTLESQQPNNQDTENNMFNSTTGIIVSTIAALTLILLVVAIILFKRSKM
KRRRNDSAASIETPEIASVCSLSSKMDPTFCSPALSRHSLETIITDGSDQ
ESQNENIYQQPDDVVKSNSYKRHSNIPAAYFQQISLDYENPDDVRQQVEN
LSPEYHELEIEDLQRRPMPQRRNDEINDDNVQQWKPKLPRKPTILQNIQS
NRQLLNNGSFESDEDYYSEALGTPNQVSPDQFEELYAKVDKSRKRQNNS
Run BLAST on NCBI

transcript from alignment at scaffold_462:202499..210429-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066961 ID=TCONS_00066961|Name=TCONS_00066961|organism=Clytia hemisphaerica|type=transcript|length=7931bp|location=Sequence derived from alignment at scaffold_462:202499..210429- (Clytia hemisphaerica)
GAGTGAGGATGAATTGACAAATTAAAAAGTGATTAAAAATGATTGTTGAT TAGCAATGTACAGTCTTAATAGAAGGAAGAAAGAAAAGCTATTAGATTGA TACTTGTAGCAAGCCGAAAAAAAAATTTCTCCCACAGAAAAAAGACAGTA AATTTGACAGCGTTGAGGAGATATGGGATATAATGGAGTTGCGAATCTAG CTTTGGTGATTATATTGTTGAAATGTGTTACAGTTTTATCGGAATCGGTG AGTTTTGAACGGAAACAGAATGTGGATATTTTTAAAAATAATGGACGAAA ATGCTACCAAATGGCAGCCAGTGTTTATGAGCAGGGCTGGTGTAAATGTG ACTTTGAGAAAATGTTTGTTGGCGATAAATGCGTTGTAAAGAGAACCATG AGTGGTAAGTGTCATCAATGTTGCGAACAGCTCAGTCATAATATGCGGTT TTTTATTACATTGGGTGAATATTCCTAAAGGTTTAGAAAATTTGTCTTTT GACTATTGAATTATAAATTTATCATTAAAAAACATGACCTTTTACTGTGT AATGTTAGTAACCTATCGTATAGTAGTAAAGTACACCCCCTTCTCACAGA ACCGGTAGGATTCTTACAGCCAGTGGGGGTAAAAATAACGGACCAAAACT CGATGGGGATTGATATATCAATGTTTTTTTATGACTGGGGATTTAAATTT CATTGTTTTATAGTCAGAAAACTCAGTGGGGATGGAAAGAATAGCACAAT ATTTTGTAGTGAGGATTTGCTTTGATCATTTTCAGCGGGAACAAAAATTA GAGTATAATTTTGCACTGGGGACAATATTTACACCAATTTTTTCCAGTTG GAAGGGTCCCAGTGGGTCTGTGAGAAGGGGGTGTTAAAGTATTCAATATA TTACCATATTCCATGTGTCAACTTTTTAGCTTGCATCATGGCACAAGTAA TAGATGTAGTCAATTTAAACATAGCTGACATCAACTATATCACTGTTCTG GATTTCAATTTCGAAACCAAAGAAAGCTTTTGGAATTATGCGTTTAGTGA TAACATTATCAAACTGATCAGTGAAAGTCAAGGTGTCTCCACCAACCTGG TAAGTTGAGTATACTTTGTTGTAAACAGCTTGCCGTAACTTGGTCTACTG CCGACATCCATCATCTAATTCTGACACCCTTTTTTAGAGCTGCAATAATA GAAAGGTCGAAACTTTTTCTTTTGTTTAGTGGTCAGTGAGGAAAAATCCT GATTCCAGTGATTCCAACTTTCATATTATTCTTATCTCTAAAGAAGGCTG TCGGAATTAGATGAGGGATGTCGATATTAGACCAACTTACGGTATCACTT TTCTTCACTTATTAATGAAGTCATTTTGAAGGCTTTGCGTGAGCAGTAAG TAGCAGGTGCCAAGAATTATATCATATTATATGGCAAACAGTGGAAATGA TTAAGAATATAAAACGTGGGTTGATTATTATTGCGATGGAAAGTCAGTCT CTACAAACATCTGGATGTTATCCAGTGTATTCTTTATTTCTTTGACATAG CTCCAGAGTTTAGACTACTCAAAAATAAATTTTTAGAATCTTTCATTCCT TGGTAAATTGGTCTTTTAAACCCAAACTAATTAAATTATATTGGGTATTT TGCCTGGTTAACTAAACTTATCCTATTGAATCAGGCTCTTTCTTTACTCA GTAAAGTAGCCTATCAAAATGCCAAAAGATAATTGCCAAGGCTGGTCATA TAGGAGATGACAGATATTCCGTTCGAAAAACGGATAGAGAGAAAACGAGG AGAAGTGTTTCGATTGATAAGGACATGATTTTAATTTGGTGATTCAAGTT GATGATTTTATACGTTAGAACCATACTTTTATCATGCTGGAATAATCAAA CAAAAACATGCGGAAAATTTTGTTTATCATATAAAGACTGTTTCATGATG ACACTGTATTTTCTTTTAAACATGATAATATTGACTTCCGACACGAAACT TTCTCGGAAAACTGTTTTCCGAAAACATTATCGAGTTTGTTTTATTTTTC ATACAAACCTATTCTTCGAAATTTGAAATGGACAGAAGAAAATTTTTTTT TAAGAATTTCAAGCTTTCAAAAAAGGAAATTTTAAGAACATATCAAGGAA AATTTTTCGAAAAAAGAAGGACTAAATAAGAATTGTACGACAGAAATACG TACGATACAATTTAAAAGAAGGCATCAATTGGAATTGAGTAACTCGAAAA TCAAGGCATTTGACCTACATTAACTCCACTATAATTCAAAATTAACCTTA AAAGATGAAAACGTTATGAAAAATAAAATCTAGCCTCATGAACTGCAAAT TATACACGATCATCTTCGTGTCAAGAAATTCGTAAAAAGATGTCAAATTC GGTCAAAGTTTAACCATTTTATGTGATAGAAATTAAACATAAATGTTCAA AACTTTTGGACTTTCTTATAAACAAAAACACGCACATTTTTAATAACAAC CCTTGGTCTGTAAATCGTGTCTCTAAATTGCCTTCTTTTGCTCAGCTTTT AATCACGAATGATAATGATTCAATCCCAAGAGGAGTATTGGCAAAATGAT AAAAAAATTAAGTTTTCAAATTTCATTATTTAGAATAGGACAGTTAACTG GAAGTTATAACAATAAACTTCAATACAAGGGTTTTTTCATACGGACTGTG GACTTAGTATACAATTGAGCCGTAGCCTAGAATTTTGATAAAGACTCTAA TTTGAAACTGTTCCTCCAAATTTTCAATATGCACAATACGAGACAATGAT ATACAATGCAGTGGTTGAAAATTTGAAGATAGAATTAGTGGTCAATTATA ATTTTAATCATTACATAATTAAAACAATTTCATGGTTTAACCACCATCAT CAGGCTCCGTACCACATTTTAATATCATGAACAATTAACAGGGACTTTCT GGAAGAAATACTAAAATATTCCGTAACTCAAACGTCAAAGGGAGGGGGCA AGTAATTGGGCTGTTCCATTAAAAACCATACAGGGAGGAGGAAGAACCTT TTCAAGCTAAAATAAAATTATTGAAAATGTGTGGATACCCCCTGGAAAGT GGCAAAATTTGCAAAAATACCCTTGTAAAGATTCTTTTCATACCTTAAGG TGAGGGTGGGCGAACTAAAATCAATCCTTTATCTCTGGAAATTTCAGAAT AACCTTTTTCCCCCCCCCCCCGGAAAAATGAAAAAACACCCCCTGGAAAT TTTTCTATGGTTACCTTCTTGAAATGTTCGTCCACCCCCCTGTATGGATA TAAAATGGAACGGCCCATTATACTATAAGGTTTTTTAATTGAAGGGGCCC GAAAAACTACTCTAGTAATGGTAATCCTAGTTATAAAGTTTTGACTTATG GGCTCTGCATTTTATAATAATTTGTCGTCATGTTTTTCTATTCAGAAAGT GGAACTTGCTGGGATGATCATGAAGATCGCATTGAATGGCAATCCGCAAT GCATGATGGTTAAAATCTTAGGTCCATCCAGATGTAAGTAACATACGATA TTTTCTTTGTGGGTGTTCAGAGGTAGGATAGGGTTGATATTTTATGTGGA TAGCACAATAATCGAAGACTTTTTTGGACAGTATTGCGACTGATTTCATG GGGTCCAAGATTCGGCTATTTCAATGAGCTGAACCAAACATTGGAAGGAG CTGGGATTCGAACCAAGAAACTCTAGTTTGTGGTACTGGCGACTGAGATC TCAAAAGGGTTATATTTTATCGAATTTTACATACAGTAAGATGGGTAGAA AATTTGCAACATGAATAGTTTTCGATGTAAGTCAAGCCGGTTCACTTTCA TTTAACCAGCTCAACTGTTATTTATTAACTATTATTTCTGCATTTTGACT AATACTAAATCACCTCTCACAAATAAGTGATTTCCTTAACCAATAATCCC ATCAAAAATCGGATTAATCAAAACACGTTCAAGGGATTTCCAGAACACAT TGCACTTGAAAAAAGCCGTTTCTTTGATTTTCGGAGCTGGGATATTGTGC TCAACTTTCAAGAAAAACAAAGCGGGAATGAATTATTGAACTTATGACAT TAATTTCCTTCCGAAATTCAATATTGATGAGTTTTAGAAAGAAGGAAACT ACGAAAATCTTTTTCCAAATAATCATAAGATTTTCATCGATCAAAATGGA ATGTGCTTCCTAACTTTAAATGAATGGTTATTGACCAAACTGACAATTTA GGAAGGCCCTGAAATATAATAGGAGGACCCTTAAAATGATAGCTTGCGAA CTGAGGAATTAGTGGCTTTAAGTGCCAATTAAAAAAGCCATTATGAGAGA GCCTATTGATTCCTTTCTAATAAATGACTCACACCACGACCTTTACTCTT TTCTATGAGAACAAGGCTCAAAATTTCATAAAAATTAGAACAATGCTGAG CCTTGAGCTGTTCAATTTTAGGCAAATTAAAGAGTCAAAGTATCAAGAAA AGGTTTTGAACCTTAAAAATACCTAACTTTTGCACTAGAATTAAGAGCAG TTTGATGCTCAAAGTATCAAAAAATCATAACAGTGAAGCCTGACAAAAAT TTACTGGTTGGTATGAAAAAACGATGTAAACTGCCGGGTGTCCGTCAGAA AAACAATGTTCCGATACAAAAAGAGGAAACCTTTCCTAACAGAATCTCAC TTATACATCATTCTAATAAGAGGCCCCAGCGGACCTTCAATTCACGCAAT CACGCAATTTTTTTTCCCAAATTCACGCATTCACGCAATGTTTTTTCGCA ATTCACGTAATTTTTGTTCACGCAAAGCTTTCCAATTCACGCATTCACAC ATTTTTTTTTTTTATTTTCACGCATTCACGCAAACCACTGGGGGTCTAAT AAGCATCGTAGATTGAAAAAAAAAATCAGTTTCATTTTGAATTTTTGAGT GACATGTGGTTCTTATTGCTTCTAGCGACGCTTACTATAATATGCAATAT TATTATAAAATATGCAATATACTCCACAGTAAGATAAAAATACCGATACG TCACAAGAATTCAAAGAAAGTGCTTTGAAGTAAACAACAATCAGTAACAT AGACGTCATTAAGGAGAAAGGATGACATCACGAGTCATATTGAAAGTAAT GAAAGTAATCTCTTCCGTTTTACAACAACGCACAAAGTTTCTTATAACTC TAATGGATGGATAGAGAATTTTTTTTCACGTCTTCGTGAATTAGAAACAA GGACGTAAACCATCTTGTAAACGTGAAGGAATTCTCGTTTATATCCCAAG GAATGATAACTGCCATGTTCTAGTACGATGTGGGGGTTGAAGAATTTTGT CAAGAACGAGGCAGTATCAAACAAGCGTTTAAGGCGTCGCCATGGCTTCC AAAGTATCGCTAACGACCATCGAAAACGGATAAAATAAATACTTCAGCAT GTTTTAGGTCGGAAATTTACAAAACAAGTTTCGCGTGGCGCTCTCTAAGG ATATCCTTTTCAATGTAAAAACATCATTGTCGACATCTACAGTGATTGTA TAACACAAAGGAACCAGAAGCTAAATAACTGAAAATTCACGACATGATAA GAAAAAAAGAAAGTAATTAATGCCTTTTTTAACGGATGATTGAAAACATT GTCTCTTTTATAAAACTTGACGTCATACTTAGAAAATACATTATGTGTAA TCTAGAATGGAGATCTGGGAGGTTAAGTAGGCATTCTAAGAGAAATGTGT TCCGTATTATGATTGCTAAAGTAGACGAAATCTTATTAGTATTTCTTTAT TGAAATTAAAATACTTGACCCTTGTGTCAATGACTGCAGGGGTAGTTTAA TGGGCAGCTTGATGTCTTCTTCAAGCATCAGATATTCATTTTTAGTCATT AGTGTGGCAAGTGGCAACAGAGGAGTCTAAAAACTTATATTTGGTTTTTA GCGATCCACTCATCAGAAGCCCAGCTGATCTTAGTCAGATACGAAACCAA GGACAATAATCTGAATCTATATTTTTCAATTATTTTTCATTGCTTTCATA GATCCAGTAGATCTTAGTCACCTTGGAGAATCGAACACTGAATCAGATAC TGCATCAAAGAAAAAATATTTACCAGAGATGGCAACAACTACATCGACCA CCACAGATGTTTTGAAAACGTTGGAAAGTCAACAACCGAACAACCAAGAT ACAGAGAACAATATGTTTAATTCAACCACTGGGATTATTGTTTCAACCAT CGCAGCTTTGACATTGATTTTACTGGTAGTGGCAATCATTCTGTTTAAAC GAAGCAAAATGAAAAGACGAAGAAATGATTCAGCTGCCAGCATCGAGGTA AGAAAGTTTGGTTGTTTCCTTGGTATTGTGTCAAATCATTATTAATCACT AGAACAATTTCGTTTTCGCTTTCAATGAGCCATGAAGCTCAATTCTTTTC GTACTAATAATTGTGTAGGAACGAAGGCATTTCGAAGTGTAATCAGATTG CACGAGCGATATTGTCTCCCTATGCGATTATACATTACAGTTGAGTCGAC ATGACTCGAACCTATATAGCTCAAATGTCTCCTTAACGGATGAGTTTTCT GGTCTCTTCAATTAAAAATGCCTTGTAAACCAGCGTCCATACCTCCAAGT TTCCCTTAATCGAACAAATTTACGTTCCCCGTGCGCGTTCGAGCTATGAA GACTTTACCATAAATGTTATGTTGAAAATTCCTCCTTTGTTCTGTTTTTG TTTCTTTTCGAAACGTTTATGAAGTACAAGGTAGAATAAATAAACAATCA TTTTTTATTTTTAACAGACACCAGAGATTGCTTCCGTATGCTCGTTATCA AGTAAAATGGATCCCACATTCTGTTCACCAGCATTAAGCAGACACAGTCT GGAAACGATTATCACAGACGGTAGCGACCAGGAATCGCAGAATGAGAATA TTTACCAGCAACCAGACGATGTCGTCAAATCGAACTCATACAAACGACAT TCTAACATACCAGCTGCTTATTTCCAACAGATCAGTTTAGATTATGAAAA TCCTGATGATGTGCGTCAACAAGTTGAGAATCTCAGCCCTGAATATCATG AATTAGAGATTGAAGATTTACAAAGAAGGCCAATGCCACAACGTAGAAAC GATGAGATCAACGACGATAATGTACAACAATGGAAACCAAAGTTACCAAG AAAGCCAACCATCCTCCAAAACATTCAAAGTAACCGACAATTGCTTAATA ATGGTTCATTTGAATCTGATGAAGATTATTATAGTGAAGCTCTTGGAACT CCCAATCAAGTTTCACCCGACCAATTCGAAGAATTGTACGCTAAAGTTGA TAAATCACGGAAGAGACAAAATAACAGTTAGAGTCTCATCATTTTTCGTG ATCTTCTTCTTCTTCTTTTTCTCTTGCTTCATTGAGAAACCACTTTCAAA ATGTACATAATCTTCTGCTGTAAATCTTTCTCAAATTTTATATAATTATT TATTTTAAAGGATTGTAAATATAACCTTAGTTTAACCATGGAGGTAATGA AATTATAGATGGAGATACCACTCCTACTATTCTATTGTATTGTATCGTTG ATAGCAAACTGTTGCTTTGTTGCTTTGGGAAAAAGCCTTTAATTTTGCTT TCGCTCATGGGAATACTTGAGTCGAAGAGAATTTGAATAAAATCACGCTA CATTTTTAATTTGTTCATTGTGTGATGACAATTTTGTTTATAAAACATAA GAAAACCTTTCAAGAATAAGCACAGAACATCGAATTTGAAATGTTCACTG CTCAGGGAACCCTCCGCAAATTTTGTCAATTTTTACATATTTACTAATGC AAATCTTTCAACTATATTCTATCAAAATTTTGAGGCAGCTGCTATTTTAG ATCTAAAGATATTTATAGCAAAGAACCTTCC

Coding sequence (CDS) from alignment at scaffold_462:202499..210429-

>TCONS_00066961 ID=TCONS_00066961|Name=TCONS_00066961|organism=Clytia hemisphaerica|type=CDS|length=6750bp|location=Sequence derived from alignment at scaffold_462:202499..210429- (Clytia hemisphaerica)
ACACCAGAGATTGCTTCCGTATGCTCGTTATCAAGTAAAATGGATCCCAC
ATTCTGTTCACCAGCATTAAGCAGACACAGTCTGGAAACGATTATCACAG
ACGGTAGCGACCAGGAATCGCAGAATGAGAATATTTACCAGCAACCAGAC
GATGTCGTCAAATCGAACTCATACAAACGACATTCTAACATACCAGCTGC
TTATTTCCAACAGATCAGTTTAGATTATGAAAATCCTGATGATGTGCGTC
AACAAGTTGAGAATCTCAGCCCTGAATATCATGAATTAGAGATTGAAGAT
TTACAAAGAAGGCCAATGCCACAACGTAGAAACGATGAGATCAACGACGA
TAATGTACAACAATGGAAACCAAAGTTACCAAGAAAGCCAACCATCCTCC
AAAACATTCAAAGTAACCGACAATTGCTTAATAATGGTTCATTTGAATCT
GATGAAGATTATTATAGTGAAGCTCTTGGAACTCCCAATCAAGTTTCACC
CGACCAATTCGAAGAATTGTACGCTAAAGTTGATAAATCACGGAAGAGAC
AAAATAACAGTTAGATCCAGTAGATCTTAGTCACCTTGGAGAATCGAACA
CTGAATCAGATACTGCATCAAAGAAAAAATATTTACCAGAGATGGCAACA
ACTACATCGACCACCACAGATGTTTTGAAAACGTTGGAAAGTCAACAACC
GAACAACCAAGATACAGAGAACAATATGTTTAATTCAACCACTGGGATTA
TTGTTTCAACCATCGCAGCTTTGACATTGATTTTACTGGTAGTGGCAATC
ATTCTGTTTAAACGAAGCAAAATGAAAAGACGAAGAAATGATTCAGCTGC
CAGCATCGAGAAAGTGGAACTTGCTGGGATGATCATGAAGATCGCATTGA
ATGGCAATCCGCAATGCATGATGGTTAAAATCTTAGGTCCATCCAGATCT
TGCATCATGGCACAAGTAATAGATGTAGTCAATTTAAACATAGCTGACAT
CAACTATATCACTGTTCTGGATTTCAATTTCGAAACCAAAGAAAGCTTTT
GGAATTATGCGTTTAGTGATAACATTATCAAACTGATCAGTGAAAGTCAA
GGTGTCTCCACCAACCTGATGGGATATAATGGAGTTGCGAATCTAGCTTT
GGTGATTATATTGTTGAAATGTGTTACAGTTTTATCGGAATCGGTGAGTT
TTGAACGGAAACAGAATGTGGATATTTTTAAAAATAATGGACGAAAATGC
TACCAAATGGCAGCCAGTGTTTATGAGCAGGGCTGGTGTAAATGTGACTT
TGAGAAAATGTTTGTTGGCGATAAATGCGTTGTAAAGAGAACCATGAGTG
ACACCAGAGATTGCTTCCGTATGCTCGTTATCAAGTAAAATGGATCCCAC
ATTCTGTTCACCAGCATTAAGCAGACACAGTCTGGAAACGATTATCACAG
ACGGTAGCGACCAGGAATCGCAGAATGAGAATATTTACCAGCAACCAGAC
GATGTCGTCAAATCGAACTCATACAAACGACATTCTAACATACCAGCTGC
TTATTTCCAACAGATCAGTTTAGATTATGAAAATCCTGATGATGTGCGTC
AACAAGTTGAGAATCTCAGCCCTGAATATCATGAATTAGAGATTGAAGAT
TTACAAAGAAGGCCAATGCCACAACGTAGAAACGATGAGATCAACGACGA
TAATGTACAACAATGGAAACCAAAGTTACCAAGAAAGCCAACCATCCTCC
AAAACATTCAAAGTAACCGACAATTGCTTAATAATGGTTCATTTGAATCT
GATGAAGATTATTATAGTGAAGCTCTTGGAACTCCCAATCAAGTTTCACC
CGACCAATTCGAAGAATTGTACGCTAAAGTTGATAAATCACGGAAGAGAC
AAAATAACAGTTAGATCCAGTAGATCTTAGTCACCTTGGAGAATCGAACA
CTGAATCAGATACTGCATCAAAGAAAAAATATTTACCAGAGATGGCAACA
ACTACATCGACCACCACAGATGTTTTGAAAACGTTGGAAAGTCAACAACC
GAACAACCAAGATACAGAGAACAATATGTTTAATTCAACCACTGGGATTA
TTGTTTCAACCATCGCAGCTTTGACATTGATTTTACTGGTAGTGGCAATC
ATTCTGTTTAAACGAAGCAAAATGAAAAGACGAAGAAATGATTCAGCTGC
CAGCATCGAGAAAGTGGAACTTGCTGGGATGATCATGAAGATCGCATTGA
ATGGCAATCCGCAATGCATGATGGTTAAAATCTTAGGTCCATCCAGATCT
TGCATCATGGCACAAGTAATAGATGTAGTCAATTTAAACATAGCTGACAT
CAACTATATCACTGTTCTGGATTTCAATTTCGAAACCAAAGAAAGCTTTT
GGAATTATGCGTTTAGTGATAACATTATCAAACTGATCAGTGAAAGTCAA
GGTGTCTCCACCAACCTGATGGGATATAATGGAGTTGCGAATCTAGCTTT
GGTGATTATATTGTTGAAATGTGTTACAGTTTTATCGGAATCGGTGAGTT
TTGAACGGAAACAGAATGTGGATATTTTTAAAAATAATGGACGAAAATGC
TACCAAATGGCAGCCAGTGTTTATGAGCAGGGCTGGTGTAAATGTGACTT
TGAGAAAATGTTTGTTGGCGATAAATGCGTTGTAAAGAGAACCATGAGTG
ACACCAGAGATTGCTTCCGTATGCTCGTTATCAAGTAAAATGGATCCCAC
ATTCTGTTCACCAGCATTAAGCAGACACAGTCTGGAAACGATTATCACAG
ACGGTAGCGACCAGGAATCGCAGAATGAGAATATTTACCAGCAACCAGAC
GATGTCGTCAAATCGAACTCATACAAACGACATTCTAACATACCAGCTGC
TTATTTCCAACAGATCAGTTTAGATTATGAAAATCCTGATGATGTGCGTC
AACAAGTTGAGAATCTCAGCCCTGAATATCATGAATTAGAGATTGAAGAT
TTACAAAGAAGGCCAATGCCACAACGTAGAAACGATGAGATCAACGACGA
TAATGTACAACAATGGAAACCAAAGTTACCAAGAAAGCCAACCATCCTCC
AAAACATTCAAAGTAACCGACAATTGCTTAATAATGGTTCATTTGAATCT
GATGAAGATTATTATAGTGAAGCTCTTGGAACTCCCAATCAAGTTTCACC
CGACCAATTCGAAGAATTGTACGCTAAAGTTGATAAATCACGGAAGAGAC
AAAATAACAGTTAGATCCAGTAGATCTTAGTCACCTTGGAGAATCGAACA
CTGAATCAGATACTGCATCAAAGAAAAAATATTTACCAGAGATGGCAACA
ACTACATCGACCACCACAGATGTTTTGAAAACGTTGGAAAGTCAACAACC
GAACAACCAAGATACAGAGAACAATATGTTTAATTCAACCACTGGGATTA
TTGTTTCAACCATCGCAGCTTTGACATTGATTTTACTGGTAGTGGCAATC
ATTCTGTTTAAACGAAGCAAAATGAAAAGACGAAGAAATGATTCAGCTGC
CAGCATCGAGAAAGTGGAACTTGCTGGGATGATCATGAAGATCGCATTGA
ATGGCAATCCGCAATGCATGATGGTTAAAATCTTAGGTCCATCCAGATCT
TGCATCATGGCACAAGTAATAGATGTAGTCAATTTAAACATAGCTGACAT
CAACTATATCACTGTTCTGGATTTCAATTTCGAAACCAAAGAAAGCTTTT
GGAATTATGCGTTTAGTGATAACATTATCAAACTGATCAGTGAAAGTCAA
GGTGTCTCCACCAACCTGATGGGATATAATGGAGTTGCGAATCTAGCTTT
GGTGATTATATTGTTGAAATGTGTTACAGTTTTATCGGAATCGGTGAGTT
TTGAACGGAAACAGAATGTGGATATTTTTAAAAATAATGGACGAAAATGC
TACCAAATGGCAGCCAGTGTTTATGAGCAGGGCTGGTGTAAATGTGACTT
TGAGAAAATGTTTGTTGGCGATAAATGCGTTGTAAAGAGAACCATGAGTG
ACACCAGAGATTGCTTCCGTATGCTCGTTATCAAGTAAAATGGATCCCAC
ATTCTGTTCACCAGCATTAAGCAGACACAGTCTGGAAACGATTATCACAG
ACGGTAGCGACCAGGAATCGCAGAATGAGAATATTTACCAGCAACCAGAC
GATGTCGTCAAATCGAACTCATACAAACGACATTCTAACATACCAGCTGC
TTATTTCCAACAGATCAGTTTAGATTATGAAAATCCTGATGATGTGCGTC
AACAAGTTGAGAATCTCAGCCCTGAATATCATGAATTAGAGATTGAAGAT
TTACAAAGAAGGCCAATGCCACAACGTAGAAACGATGAGATCAACGACGA
TAATGTACAACAATGGAAACCAAAGTTACCAAGAAAGCCAACCATCCTCC
AAAACATTCAAAGTAACCGACAATTGCTTAATAATGGTTCATTTGAATCT
GATGAAGATTATTATAGTGAAGCTCTTGGAACTCCCAATCAAGTTTCACC
CGACCAATTCGAAGAATTGTACGCTAAAGTTGATAAATCACGGAAGAGAC
AAAATAACAGTTAGATCCAGTAGATCTTAGTCACCTTGGAGAATCGAACA
CTGAATCAGATACTGCATCAAAGAAAAAATATTTACCAGAGATGGCAACA
ACTACATCGACCACCACAGATGTTTTGAAAACGTTGGAAAGTCAACAACC
GAACAACCAAGATACAGAGAACAATATGTTTAATTCAACCACTGGGATTA
TTGTTTCAACCATCGCAGCTTTGACATTGATTTTACTGGTAGTGGCAATC
ATTCTGTTTAAACGAAGCAAAATGAAAAGACGAAGAAATGATTCAGCTGC
CAGCATCGAGAAAGTGGAACTTGCTGGGATGATCATGAAGATCGCATTGA
ATGGCAATCCGCAATGCATGATGGTTAAAATCTTAGGTCCATCCAGATCT
TGCATCATGGCACAAGTAATAGATGTAGTCAATTTAAACATAGCTGACAT
CAACTATATCACTGTTCTGGATTTCAATTTCGAAACCAAAGAAAGCTTTT
GGAATTATGCGTTTAGTGATAACATTATCAAACTGATCAGTGAAAGTCAA
GGTGTCTCCACCAACCTGATGGGATATAATGGAGTTGCGAATCTAGCTTT
GGTGATTATATTGTTGAAATGTGTTACAGTTTTATCGGAATCGGTGAGTT
TTGAACGGAAACAGAATGTGGATATTTTTAAAAATAATGGACGAAAATGC
TACCAAATGGCAGCCAGTGTTTATGAGCAGGGCTGGTGTAAATGTGACTT
TGAGAAAATGTTTGTTGGCGATAAATGCGTTGTAAAGAGAACCATGAGTG
ACACCAGAGATTGCTTCCGTATGCTCGTTATCAAGTAAAATGGATCCCAC
ATTCTGTTCACCAGCATTAAGCAGACACAGTCTGGAAACGATTATCACAG
ACGGTAGCGACCAGGAATCGCAGAATGAGAATATTTACCAGCAACCAGAC
GATGTCGTCAAATCGAACTCATACAAACGACATTCTAACATACCAGCTGC
TTATTTCCAACAGATCAGTTTAGATTATGAAAATCCTGATGATGTGCGTC
AACAAGTTGAGAATCTCAGCCCTGAATATCATGAATTAGAGATTGAAGAT
TTACAAAGAAGGCCAATGCCACAACGTAGAAACGATGAGATCAACGACGA
TAATGTACAACAATGGAAACCAAAGTTACCAAGAAAGCCAACCATCCTCC
AAAACATTCAAAGTAACCGACAATTGCTTAATAATGGTTCATTTGAATCT
GATGAAGATTATTATAGTGAAGCTCTTGGAACTCCCAATCAAGTTTCACC
CGACCAATTCGAAGAATTGTACGCTAAAGTTGATAAATCACGGAAGAGAC
AAAATAACAGTTAGATCCAGTAGATCTTAGTCACCTTGGAGAATCGAACA
CTGAATCAGATACTGCATCAAAGAAAAAATATTTACCAGAGATGGCAACA
ACTACATCGACCACCACAGATGTTTTGAAAACGTTGGAAAGTCAACAACC
GAACAACCAAGATACAGAGAACAATATGTTTAATTCAACCACTGGGATTA
TTGTTTCAACCATCGCAGCTTTGACATTGATTTTACTGGTAGTGGCAATC
ATTCTGTTTAAACGAAGCAAAATGAAAAGACGAAGAAATGATTCAGCTGC
CAGCATCGAGAAAGTGGAACTTGCTGGGATGATCATGAAGATCGCATTGA
ATGGCAATCCGCAATGCATGATGGTTAAAATCTTAGGTCCATCCAGATCT
TGCATCATGGCACAAGTAATAGATGTAGTCAATTTAAACATAGCTGACAT
CAACTATATCACTGTTCTGGATTTCAATTTCGAAACCAAAGAAAGCTTTT
GGAATTATGCGTTTAGTGATAACATTATCAAACTGATCAGTGAAAGTCAA
GGTGTCTCCACCAACCTGATGGGATATAATGGAGTTGCGAATCTAGCTTT
GGTGATTATATTGTTGAAATGTGTTACAGTTTTATCGGAATCGGTGAGTT
TTGAACGGAAACAGAATGTGGATATTTTTAAAAATAATGGACGAAAATGC
TACCAAATGGCAGCCAGTGTTTATGAGCAGGGCTGGTGTAAATGTGACTT
TGAGAAAATGTTTGTTGGCGATAAATGCGTTGTAAAGAGAACCATGAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041844XLOC_041844Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066961-exon-scaffold_462-1575043694:210026..210429TCONS_00066961-exon-scaffold_462-1575043694:210026..210429Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1575043694:209331..209500TCONS_00066961-exon-scaffold_462-1575043694:209331..209500Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1575043694:206897..206984TCONS_00066961-exon-scaffold_462-1575043694:206897..206984Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1575043694:204083..204378TCONS_00066961-exon-scaffold_462-1575043694:204083..204378Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1575043694:202499..203612TCONS_00066961-exon-scaffold_462-1575043694:202499..203612Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1510915933:210026..210429TCONS_00066961-exon-scaffold_462-1510915933:210026..210429Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1510915933:209331..209500TCONS_00066961-exon-scaffold_462-1510915933:209331..209500Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1510915933:206897..206984TCONS_00066961-exon-scaffold_462-1510915933:206897..206984Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1510915933:204083..204378TCONS_00066961-exon-scaffold_462-1510915933:204083..204378Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1510915933:202499..203612TCONS_00066961-exon-scaffold_462-1510915933:202499..203612Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1491911889:210026..210429TCONS_00066961-exon-scaffold_462-1491911889:210026..210429Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1491911889:209331..209500TCONS_00066961-exon-scaffold_462-1491911889:209331..209500Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1491911889:206897..206984TCONS_00066961-exon-scaffold_462-1491911889:206897..206984Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1491911889:204083..204378TCONS_00066961-exon-scaffold_462-1491911889:204083..204378Clytia hemisphaericaexon
TCONS_00066961-exon-scaffold_462-1491911889:202499..203612TCONS_00066961-exon-scaffold_462-1491911889:202499..203612Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Putative cnidarian restricted secreted proteinTCONS_00066961-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:202499..210429 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (51.5375 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0649995 0.0635919 7.04495 3.60938 12.3256 14.6244 24.3116 30.9872 9.62337 51.5375 11.4921 6.81982 8.50388 8.99048 15.9022 17.946 2.62409 2.78976 0.0555047 0.0812197 0 0 0 0 8.85394 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066961 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
200400600800100012001400160018002000Sequence
Match NameE-valueIdentityDescription
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