TCONS_00066957 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066957
Unique NameTCONS_00066957
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2597

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066957 ID=TCONS_00066957|Name=TCONS_00066957|organism=Clytia hemisphaerica|type=transcript|length=2597bp
TGTTTATGTGCAAtttcaaattacagaaattcGTGCTCAAACCTTCTTAA
ACTTCTCTTAAACGTTGAGCatgataaaaaaaagatttgcagTATGTTCG
TACATTATAGCCAAGCGTGTTCTTTTGTTAATTTGAGAGTTGTATCGTAG
AGCAAGACTTTGAGAGAGAGAAAGAATAAACTCTTAGTGTATCATATTAC
AAATGAGCAACGAACATACGTATTATAACGAGGATAACTGAGAAAAGTCT
TTTATCGCGTCGTTCGTCTTGTTGTGTGCGAACATCAAGTTTACTTTTAT
ATGTGTGCACGAATATCAGTGACATGTTTACACTGTAGAAGTTGACAATA
ATAGAGAAATCAAGGAGAAATTGGTTATTAAATAGAAACCAGGTCTTCCG
CGATTGTAAAGAGAAAAGCTTAATATAATCAGCTGTTGTGTATTTCATAA
TCAACACACGCGATTATAAGCGAGAATGACATACTTACAACAGTCAGACA
AGAAAAAAAGGATAAACTTTAAACAATAAAAGCGGAATACAATCTCCATA
AGCTCTAGATAAAGAAACGAAAGGTCGAGACaagatttttgttgtttatC
TCGTTGCTGGCTTTTAATTTCTTATTAtctatttaaaaagaaaggagAAA
TATTGTCGTAAAGATCTCTCCTTAATCAGTAGTGGAGTAACTTTGGAAAA
GtgggataaaatctttattaaaatATTAGATATAAACGCAACTTTACAGA
TTTTAAGTGTATTCTAAAACCTACATGGAAAGACAGATTGAAGTCGATTC
GAAAGAGGAGATCAAAAATATGATCGTTGAGTATCGGCAGGAAACTCCTA
TCGAGCATCACCAAAGACATCTTCAAAATTTGTCACCGCAAAGCCAAGAC
TACGTAGATTATTATATGTCACCAACGCATCATTCACATTATGGTGGCAT
GTCACCAATTTCACCAAATGCACCAAACATGCCACCAACACAATACCAAT
ATCCAGCACAGAACCAACAAATGTTAAAATCAAGATTAAGTCCGAACATG
GTCTCGACTTCAATGAAAAATGGTAATCGTACTAATTCATCTAATTTAGC
ACATGACCAAGCATTGATTGCTGAGATACGCAGATTCCCATGTTTGTATG
ATCGTGCGCATCCAGATTATAAGAAAGTGACGGCTTGCCAACACGCTTGG
TCCCAAATATGTGAAGAATGCAATTGGGTCAAAAACaGCGATGAAGCGAT
ACGGTTGTTTGAAGTGTTAAAGAAACGATACAGTAAAAAGAAAATGGACT
ATAAGAGAGCTCGTTTATCAACAGACGAACCTCTACTCATCAAAAAAGCT
GAAACTGAATTAGAGAAATATCATTTTATGAAGTGGATGGAGCCTTTTAT
AAGATTCCGAACAACCAAACTGGTCAACGAGAAATCAAATGCTGACAGGA
CGACGTATAGAGAAGAACAACATCAAATGAATTCCGGTACGAATAAGACA
ATTGCTGAATATGCTTACGAGCAAACAATAGGTGGTGGGAGTGGTGCCAA
CCGAAAACGATCTTATGATTACGGGGCCATGCCGGTGCACAATTTCTACG
ATGAACAATCTAGAATCGCTTATAAAAACTCTACAGTTGTTGAATTGAAT
GGTCGAATGTCTTATTCACCAaattctcaacaacaacaacaaagattAGA
ACCTAAACGTAGTCGAATTCAGCCATCACCAATTCGAATGCAAGCGTCCC
CAGAGAGTTCATTCACCAATAAAGAAACCACAGGACTAGAAGGATCTCCT
CATCATCATCCAGTACGATCCTCTTCCAAAGAAACAACATTCAGTGACCA
ACATAGCCCAACTCCGACTGAAACATCACATAAATCGGGACAAGAGGAAC
AACCAAATCCGTCTATAGTAACCACAAGTAAAATCCCATACGCAACGAAG
TTTTTATCAAACGAGGATGATTTATTTTCAGCTTTAATCGTAAGCGAAAT
GAAGAATCTAGATGAGAGAAGGCGATACCAAGTCAAACATAAAATTTCGA
ATATTCTATTTGATGCTTTGATGGAGCAATGTAATGAAAAGAAACAGGAC
ACGGATGCTAGTAGCACAGACAATAACTGATGTTTGCTTATGTTTGCTTC
TTTTATTACCGGCTTTTTGCCTAGATGGTATTgcccagacccgatcaatc
gaacttgttaAACTAATCAAACAATCAATAACCGTTTTCTCCGAGAAAAA
TGAATGTTATTCTCCGAAGTTATGGATAAATTTTTATGTTATAAATGGGC
GTTGCTTTCATAAATTTCCATGATTCATGGACGATAAGAAATTGGCCGGA
ATAACTGCTTTATATTCAATAAGTTTTATGCGGctgatcaaaaatttttg
gCATGGCTTGCCGTGAagcaacatgttcttatttttcgatGTTCCTTCCT
ACGTGTAAATAGTTTCGAACGATTATATTTTTCATTAGTCATTTTTATTG
TACATATATTTGAAAACACCATACCATTTCATACTTTAACTCTAATGCTA
CgaataaaatttattcaatttctttttatattcCACCCATATTGTGC
Run BLAST on NCBI

protein sequence of TCONS_00066957-protein

>TCONS_00066957-protein ID=TCONS_00066957-protein|Name=TCONS_00066957-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MERQIEVDSKEEIKNMIVEYRQETPIEHHQRHLQNLSPQSQDYVDYYMSP
THHSHYGGMSPISPNAPNMPPTQYQYPAQNQQMLKSRLSPNMVSTSMKNG
NRTNSSNLAHDQALIAEIRRFPCLYDRAHPDYKKVTACQHAWSQICEECN
WVKNSDEAIRLFEVLKKRYSKKKMDYKRARLSTDEPLLIKKAETELEKYH
FMKWMEPFIRFRTTKLVNEKSNADRTTYREEQHQMNSGTNKTIAEYAYEQ
TIGGGSGANRKRSYDYGAMPVHNFYDEQSRIAYKNSTVVELNGRMSYSPN
SQQQQQRLEPKRSRIQPSPIRMQASPESSFTNKETTGLEGSPHHHPVRSS
SKETTFSDQHSPTPTETSHKSGQEEQPNPSIVTTSKIPYATKFLSNEDDL
FSALIVSEMKNLDERRRYQVKHKISNILFDALMEQCNEKKQDTDASSTDN
N
Run BLAST on NCBI

transcript from alignment at scaffold_462:146312..157555-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066957 ID=TCONS_00066957|Name=TCONS_00066957|organism=Clytia hemisphaerica|type=transcript|length=11244bp|location=Sequence derived from alignment at scaffold_462:146312..157555- (Clytia hemisphaerica)
TGTTTATGTGCAATTTCAAATTACAGAAATTCGTGCTCAAACCTTCTTAA ACTTCTCTTAAACGTTGAGCATGATAAAAAAAAGATTTGCAGTATGTTCG TACATTATAGCCAAGCGTGTTCTTTTGTTAATTTGAGAGTTGTATCGTAG AGCAAGACTTTGAGAGAGAGAAAGAATAAACTCTTAGTGTATCATATTAC AAATGAGCAACGAACATACGTATTATAACGAGGATAACTGAGAAAAGTCT TTTATCGCGTCGTTCGTCTTGTTGTGTGCGAACATCAAGTTTACTTTTAT ATGTGTGCACGAATATCAGTGACATGTTTACACTGTAGAAGTTGACAATA ATAGAGAAATCAAGGAGAAATTGGTTATTAAATAGAAACCAGGTCTTCCG CGATTGTAAAGAGAAAAGCTTAATATAATCAGCTGTTGTGTATTTCATAA TCAACACACGCGATTATAAGCGAGAATGACATACTTACAACAGTCAGACA AGAAAAAAAGGATAAACTTTAAACAATAAAAGCGGAATACAATCTCCATA AGCTCTAGATAAAGAAACGAAAGGTCGAGACAAGATTTTTGTTGTTTATC TCGTTGCTGGCTTTTAATTTCTTATTATCTATTTAAAAAGAAAGGAGAAA TATTGTCGTAAAGATCTCTCCTTAATCAGTAGTGGAGTAACTTTGGAAAA GTGGGATAAAATCTTTATTAAAATATTAGATATAAACGCAACTTTACAGA TTTTAAGTGTATTCTAAAACCTACATGGAAAGACAGATTGAAGTCGATTC GAAAGAGGAGATCAAAAATATGATCGTTGAGTATCGGCAGGAAACTCCTA TCGAGCATCACCAAAGACATCTTCAAAATTTGTCACCGCAAAGCCAAGAC TACGTAGATTATTATATGTCACCAACGCATCATTCACATTATGGTGGCAT GTCACCAATTTCACCAAATGCACCAAACATGCCACCAACACAATACCAAT ATCCAGCACAGAACCAACAAATGTTAAAATCAAGATTAAGTCCGAACATG GTCTCGACTTCAATGAAAAATGGTAATCGTACTAATTCATCTAATTTAGC ACATGACCAAGCATTGATTGCTGAGATACGCAGATTCCCATGTTTGTATG ATCGTGCGCATCCAGATTATAAGAAAGTGACGGCTTGCCAACACGCTTGG TCCCAAATATGTGAAGAATGCAATTGGGTCAAAAACAGTAAGTGTTTTTT TTTTCTCACTTGTTTTAATTTTCATTCTTTAGTTTTTGTTTTTCGCTTTT TGGTTTAAATCTACTTAGACTCTGAAACAATATTTTACACTTTTTACAAA AGAAAGCATTTGCACAGCTTAAGTGATATTTTAAGCTTACGTGATATTTT AAGCTTACGTGATATATCGAGGCATTCAAAAAGTATCAACTTCGTTTATT ATTTTCACGATTTTGTGACTTTTACTGTCAAATCATGCATGTTGGTTGTT GAAATACACATTATTTGCGCCTCTTTGATGCAAATAACCATTCAAATAGT ATTTATTTGACATGTTTTGAGTTTAGTTTAGAAATATTTCGTGGATGAGA CCCTTCCAAATTTCCATTGGGACTTAATTTCGCGGATTTTCGCGGATGAC ACCCAAATCCGCAAAATCCGCGAAATTTAATCCCCGCGAAAGTTTATCCC ATTAAAGTATCATCTCTTTTAAGATCAAAACCTTTTTTATAGACCTCTGT CTTTAAAGACCTATTGGGACCCCCACCCCACTGAAAGATTCGGACGAAAT TTGATGGATAAAAAATTGATAAAAAATTGCACTCCAAGATCATACTGTTT TTTTTGACTTGGGAACAATAGAATTTCTGTTCCAATTGATACACCCCCTT CTCGACCCACTGGGAACCCTTCCCACTGGAAAATCGGCCAAAATATTGTC CCCGGTGGATAATTATCCTCCCATTTTTGTCCACACTGAAAATAATCAAA TAAACCAATCCTCACTGCAAAATATTATGCTAATTTTCCAATCACCACTG AATTTTCTGACTTGAAAATAAAAGAATTTAAATCCCCCGTCTATGAAAAT ATGGGAGTATCAATCCCCATCGAGTTTCAGTCCGTTATTTTTACCCCCAC TGGCTGAAATATTCTACCAGGTCTATGAGAAGGGGGTGTATTGATATTTT GATAGAAATGTACACCCCACTGTGGGGAAAGATCTCGCCGTGGATGTGAG ATAGGGGTGTTTTTTATAAACTTATACATTATTACACCAAAATAATACTT TTTCCAAAAGAAATTCAGACGATGAAAATTTAGCAATTTTATTTCGATTC TTAAATTCTAATGGTCAAGGTTGAATTCGTATTGACCCACTATTGAAAAC TTTACCTCCATCATTAAATAGGTTTGAGAAAAAATTATTTTGTTTACGCC CTGTTTAATACATTTTTGACCAATCACGTTAAAATTACTATTCAGATAAA CAATGAAAGCCCACGTGACTTTCATTTCTTTCCCTCTTATGTCATATTTC CGAATGGATGGATGCATTGCCATTAAAAATGTATTTTATAATTGAGTGCT GAAAATCGTAGCCTAATTGTTAGTTGATATATTATTCTTGAGGAATGTTT TTGGGGCTTTTTATTGTATCGATTTTACTGAGAAAAGTTTTCGTTTTCAT ACTTTTTTTTCGTACTTTTATCAACAATCAAATCAAGATTCGAGGCAACA GCTTTGACAATTTTCAATGGGAGTTTATAACACCCCTTCTCGCAGATCCG GTGGGATTTTATCATCCATTGGGGGTTAAAATAACGGACCATAACTCGAT GGGGATTAATATTCCCATGTTTTTGGTGGCTGGGGATTTGAATTTCATTG TTTTCCAGCCAGAAAATTCAGTGGGGATGGGAGAAATATCACAATGTTTT GCAATGAGGATTTTCTTATCTGATTATTTTCAGCGAGGATAAAAATTAGA GGATAATTTTCCACAGGGGACGATAAGGGGGTGTTTTATTCTATGATGTC CTTTTTTCGCTAGATTACTTATGTAGAACAGTTTTGAAGTTTCTGTCCAA GATGTCTTTGGGGGGGGGGCAAAGTGGTTTGCGTGATGTCGTGATAGAGA CTTTTTCTAGCGTGATCACGTGATTTGGAATCTTTTTCTTCGTCATTGCG TGATCAGAGGTCAAAACGTGATCGTGATTTGAAAGATTGATTGATTTGGA CTTTTTCAAAGGAATGCGTGGCTTTCCAGAGCTTTGTCCAATAGTCCGAA TCCCCAATGAAAAAAGCTGAAGTAACTCCAATTTATTCAACTTTCTACGA ACCCTGCTGTATTATTTGGTCAAGATTTCGCCCCAAGTGGGAAAAATACC TTACAGTTTCAGCCTCACTAATGTTCAGAATTGTCATACTGATGCCCAAA CCAATATTCCTCTTAAGAACCCGTAAGTTTAACATCTGGCCAAAACGGTT TTTATTTTCATGATTTTATCTAATTAGAATTAAGTCTTTTACGCCACTAA AATTTTTTATTCATTTTTCAAGAGTGCTGAAAATCAATAATTTTGAAGTT TTAAACTTTAGCCTCGTGCTGGTTAAAATTCTTTTATACGAAACACGCGC GTATAAAGAACGAAATATTGTCACGACAAATACCTTGCGGAATAAAGCCG GATTTTGTCATTAAATTTTGTTTTTATTGAAATTTTCTGTTAATCTATTG ATTGAACATAATAATTTAAAAATCTTATTGAATGTTTTAAAAATGACATT TTTCCCAATTTCATTAAAATCGGTCATTTTGCATATACAGTTGATGCTCT CTAATTCGATATCCTAGGATAATTGCATTTTCATCGAATAAGGGAGCGCG TATCAAATAGTAGGGCGTTGTTTATAAGGGTTTCTTGTTGATGGTGGCTT TCAATATTATCGAATAATGGAGCGTATCGTATAATAGAACGTTGAATTAG AGAGCGGCAACTGTATTATTTTCCAATTGTAAAATAAATTTTCATTGCTT AGAAAGTGCTAAAGGCTTCTTTATTGGGCGTATTTTGTAACAATACTTTG GATTTCAAGAACTGGGGGTAGAATCTGGGGGTAATTCGGTTTGTGTTTTT TTTCTAATTCCCTAAAGAAATAGCTCCTCTTTATTTTCTCATCTGTGTTT CATCTATCTAAAGACGATTCTTTTTTTAGTCAATCTACCCTAATTCAAAA GGGGCTTATCTTAAAGAGAAATCTCTAACTCTCCGGCAACAAGGCCCTGT TTTTAGGCATGTAAGGGTACTTGAAAGACACGCTCCTTTCTATGTATCAG GAATCTTGCATTGATTTCTTTATTTTTTCCTTTTCAACGAGTACACACAA TCCTTACTCTCTCTTTGTTGTTTAGTTCAGAAACAAAATTCGGCATAGTT CACAAAGCTAGACATTATGCACTTCCTTTTAAAGATAAGTTATGAAGAAT AGTTTCTTCTCTAGAAAGAGGCGGGCGGCATTACGGATAAGAACGATATG GTCGCGACTAATTGTACAAAATCATGATTATTAAGTTGAAAATTGTTTAC CATTTTCTATTGTTTTTAATTATTCTTTTTCTCATTTACGCAGCTAGTAG GCTTTGTGCCAAAAGTTGTTTTCAATGGGATGGGATTCAATTTCTCAGCT TGATCTCAGCTTTTCGACGATGGGTATGTCAGAAAAGTCATAAAATCTAT AATAACACATCCTTCTCACAGACCCACTGGGACCCCTTCGCACTGGAAAA ATTGTTCAAAATATCGTCCCCGGTGGAAAATTATCCGCCAATTTTTGTCC CCACTGAAAATAGTCAAATAAACCAATGTCAATTGAATACCGAACCAATC CGATTTCCTGACCATGTATATTTCTAGGGGATTTCTAGTGACTATGAATA AACCCGCAATCCTCACTGCAAAATGTTATGCTATTATTTCCATCCCCACT GAATTTTCTGACTTAAAAACAAAAGAATTGAAATCCCCAGTCATGAAAAA TATATCAATCCCTCTCCGTTAATTTCATTCCCACTTGCTGAAAAATTCCT ACCGGGTCTTTGAGAAGGAGGTGTATTGGGGGTGTATGTTGTTATTGGTT TTAATTTGCTATAGAATGAATAGTTTTTGCATTGACGTTATAACACTCCT GTCTCAGTGACCTATTTGACGAAATTTCAGGGTATTTTTTAACCGGAAAT CGGTTTCAATAATTGTCGGCCAAATATTTCAATCAGAGAAGAATCACACC GGGTATTTTGCACTGGGCGTGTCTTTCGACCCTGCTAAAGTCGTACCCAA TCCTCTTTAGAAGTTAAGGGCTGATATAGTTTCTTGTGTCTTTAGTATTG TAATCTTTTCCGTATACAGGAATATTCTAAAAAACAATAGATAAGAATGA AACATTCAAATGAAAACCATGTCTTGTCGCATTTAACTATCACATGGATG TTGTAGAGAGAAAAAGCAGGAAAGGAAAAGATCAATTGTATAGCTGCTCG ATAATCGTGTCTCGACCGAATTCCATTTACCGCTTTTTCTGAACTAATTT CGTACTCAAATTAGAGTGATTAACTTTTTTCCATCGATGTTTTGATGTAC ACAAAAAGCCACATAAATACGAAAGTTTTTAAATTATGATTTTTCACAGC CGTCTACCATGCCAACTTGATGAGATTATCCCATCAAAAATTGTGATGAG ATCAAGATATCGGAGCCAAAGAATTAAACAATTACGACTTTTGAATTTTA GGCTAAAGGTTGCCAAAAGATTTAAATGATTTCATCCATCATACACCTCT GAAATAAAACAAGTGGTCCAGTTAATTTAGTAAATTGCTTTACAAACATC ATCAACTCCATTCTTTTAAAGAATGGGCTTTTCCAGAACAAAATTGAATA TAGGGAGTGCAGGGTATAACATTTTTTGGTAATTTACCCCCCGGACATTG TGACTTTCGATCCCCCGGACAGCAGGTCTAGCCCCCCCCCCCCCGGACAA GCATCAGTCTACCCCTGGACTTTCAAAATTACCCCCAAAAAGAGCAAATT TACCCCCCGGACATTGTGACTTTCGATCCCCCGGACAGCAGGTCTAGCCC CCCCCCCCCGGACAAGCATCAGTCTACCCCTGGACTTTCAAAATTACCCC CAAAAAGAGCAAATTTACCCACCGGACAAGACAATTTTTTTAGATTTTTC ACTACCCCCGGACACTATATCCTCCACCCCCAGACGGATATTTTCTTGAA GAGCCCAGTGTATGAATTATTGTCAAGACCTTTCAAGATATTTTAGTCAT GGTTACTAGTCAGGGGGTATTTATTGTAATCGATATTTCTTTTTCTAAAG GCACAACCAACCAATTAAACCCAAGCTGCGGTTTGCGTGATGTCGTGATG GACTTTTCTAGCGTGATGACGTGATTTGAGAATATTTCTTCGTGATTGCG TGATCAGAGGTCAAAAGGTGATCGTGATTTGAAAATTTTTTGAGCCGTGA TGCGTCGTTTGGCCTTTTTTCAAGGGATGCGTGATTGTCTAAGTTTCTTG CCGTTTTGCGTGATCGTGATTTAAGATGAGAACTGCTTGATATCGTGATC GGAGTTACTGCTGTGGGAGCCTCATTAAAATCTAAAATTTTCAAAGGATT CTCTAAATATTTTATTGTGTATCGATCAGTATAATTACGCGATTAGTGTA AAAAATAATGGCAATACCAATTTCAATAATTAGACTGGTAGTTAGTCAGT CAAATGATTTACTAACCACGTCACTAGTGCCTAGTATTCGTTTATTGTAT GGTAATTCCATTGAACAGCTGTCAATCAATTACATAAGCATTATACATCC TGAATAACGTTCGAAAAGAGATGTGGTCCAAATCATTCACGCATAGATGC TTAAAGGCCGGTGTCCACTTTCGCGCGAGAAACTTTTCACGTTGTTTGTA ACGTCATTGGTTGATTAAAAAAAGAAGCAATTCCATTGGTCAAAATTGAC GTAACGGTTGAAAAAAGTTGAACTTCCTTCAACTTTTTTTTTTGTTCGCG TGAAACTTTTTTATGACGTAATCTTTTCTTCAGGCAAAAACGGTTAAGAA AAAATCTTTCGCGCGCCTCGCACAAAAGTGGACACCGGCCTTAAGAGTAC GTAGTTCTTTTTTCAAAATGACGTCGCCGGTGCGCTATTACGTCAGTTTA AAGTTTGATATGACGTCAAAAGATTTGGATTGAAATTCTTAATTTAGGGT ACTAAAGAATAACAAGGATGGTTTTATGTTTCATTTCATAGTAGTGCTTG TTGTATGAAGGTCTCTTTGAGTCTTTCTGGATTTAAAAAAAAAGTTTGGT TGCTAAGTGAAAGCTATTACACAGTCATTCTACCATTTTTAGAATCGGTA AAAAGCTTTTCCGCTGCCGCGATTGGTTGAATTTCTCTTTCGTTCTGCAT TACACCATTATTTCAAGTTCTATAATCCTAATCATTAGATCAGTAATAAT TTTTTGTGAAAGATCAAACGCAACACATCACTTTAAAAACNTTACACCAT TATTTCAAATTCTATAATCCTAATCATTAGATCAGTAATAATTTTTTGTG AAAGATCAATCGCAACACATCACTTTAAAAACTAGTTGGTTCAAGGAATG GGTTGGTGAATATTTTTGGCTACAACTCGTTCAAAACCCCCTTTTTTCTT GATAAGTTACTACAAGGGTGGTTTAAATTTGCAGCTTTTCAGAAATAATT TTGATAGTTTTTACCTCTGCTACAGTGCTCCAATGGAACTTACCACACTG GGAATGAAAATTTCTATTGTATTAATTCCAGTGGAGAAAGAAATTCTATT GTTCCCAACTAAAAACTTTAGCAGAATGCCAATTTCCCAGTTGGCTGAAC TTTTCTTCCAACCAGGGACGAATTTCGGTAAAATTTTCTAATGAGGCTGG GGTCCACCGGGTGTGTGACAACGAGGTGTTAAAGTCTATTCACGATAAGT GTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCAATCT TTATAAATTTGGTATCATTGAAAAGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAATCTTCTTAAAGTTTTT TTTATTTCAAATTGTTCCACTCACTAATATCTTTCTAATGATACCAAATT TATAAAGATTTAAGAATTCCTTCAAAAGTTACAGGTAAATGAAAAAAGAG TGCACACTTATTGTGAATAGACTTTAGATCATAATTGTCAATATTTGGTA TTTTGTGCTTATCTCTATTTTGGATCTGAGGGATTCAAAACTTAAGACGG GTAGTGTTGCCAGTGCAATACTATTAAGGGTTATTTAGACGACACATTAT GTTGGTGAAAAATATTCGAAAATATAGTTTGCAGACCGTACAAATGTGCT CTATTATGAAAACCAATTTTCTTTCGAAAAACAATCCCCCTATATTCTTG GAATATTATCATTTTTTTTTTTATGAAATATTATTTTTTACTGAAGATTG TCATCCTAGATAGCATTAAAGTTTGAGTATGAAATTAACTTAAATCGTCT TCTTTACTCAAACTAGTATATTCTTGGAATATTGCAAATAGTGATGACAA TATATTTAGTATATAGAGATTGCCAGCACTTAGCAATAAATATCCCGGTA ATATATTGTGTAGAGTATGTAGTCCTTTTATGTAGCTGAACTGAAACTCG TCATCTTCTTATTTTCTTCTTCTTCTTTATTCAGGCGATGAAGCGATACG GTTGTTTGAAGTGTTAAAGAAACGATACAGTAAAAAGAAAATGGACTATA AGAGAGCTCGTTTATCAACAGACGAACCTCTACTCATCAAAAAAGCTGAA ACTGAATTAGAGAAATATCATTTTATGAAGTGGATGGAGCCTTTTATAAG ATTCCGAACAACCAAACTGGTCAACGAGAAATCAAATGCTGACAGGACGA CGTATAGAGAAGAACAACATCAAATGAATTCCGGTACGAATAAGACAATT GCTGAATATGCTTACGAGCAAACAATAGGTGGTGGGAGTGGTGCCAACCG AAAACGATCTTATGATTACGGGGCCATGCCGGTGCACAATTTCTACGATG AACAATCTAGAATCGCTTATAAAAACTCTACAGTTGTTGAATTGAATGGT CGAATGTCTTATTCACCAAATTCTCAACAACAACAACAAAGATTAGAACC TAAACGTAGTCGAATTCAGCCATCACCAATTCGAATGCAAGCGTCCCCAG AGAGTTCATTCACCAATAAAGAAACCACAGGACTAGAAGGATCTCCTCAT CATCATCCAGTACGATCCTCTTCCAAAGAAACAACATTCAGTGACCAACA TAGCCCAACTCCGACTGAAACATCACATAAATCGGGACAAGAGGAACAAC CAAATCCGTCTATAGTAACCACAAGTAAAATCCCATACGCAACGAAGTTT TTATCAAACGAGGATGATTTATTTTCAGCTTTAATCGTAAGCGAAATGAA GAATCTAGATGAGAGAAGGCGATACCAAGTCAAACATAAAATTTCGAATA TTCTATTTGATGCTTTGATGGAGCAATGTAATGAAAAGAAACAGGACACG GATGCTAGTAGCACAGACAATAACTGATGTTTGCTTATGTTTGCTTCTTT TATTACCGGCTTTTTGCCTAGATGGTATTGCCCAGACCCGATCAATCGAA CTTGTTAAACTAATCAAACAATCAATAACCGTTTTCTCCGAGAAAAATGA ATGTTATTCTCCGAAGTTATGGATAAATTTTTATGTTATAAATGGGCGTT GCTTTCATAAATTTCCATGATTCATGGACGATAAGAAATTGGCCGGAATA ACTGCTTTATATTCAATAAGTTTTATGCGGCTGATCAAAAATTTTTGGCA TGGCTTGCCGTGAAGCAACATGTTCTTATTTTTCGATGTTCCTTCCTACG TGTAAATAGTTTCGAACGATTATATTTTTCATTAGTCATTTTTATTGTAC ATATATTTGAAAACACCATACCATTTCATACTTTAACTCTAATGCTACGA ATAAAATTTATTCAATTTCTTTTTATATTCCACCCATATTGTGC

Coding sequence (CDS) from alignment at scaffold_462:146312..157555-

>TCONS_00066957 ID=TCONS_00066957|Name=TCONS_00066957|organism=Clytia hemisphaerica|type=CDS|length=2712bp|location=Sequence derived from alignment at scaffold_462:146312..157555- (Clytia hemisphaerica)
GCGATGAAGCGATACGGTTGTTTGAAGTGTTAAAGAAACGATACAGTAAA
AAGAAAATGGACTATAAGAGAGCTCGTTTATCAACAGACGAACCTCTACT
CATCAAAAAAGCTGAAACTGAATTAGAGAAATATCATTTTATGAAGTGGA
TGGAGCCTTTTATAAGATTCCGAACAACCAAACTGGTCAACGAGAAATCA
AATGCTGACAGGACGACGTATAGAGAAGAACAACATCAAATGAATTCCGG
TACGAATAAGACAATTGCTGAATATGCTTACGAGCAAACAATAGGTGGTG
GGAGTGGTGCCAACCGAAAACGATCTTATGATTACGGGGCCATGCCGGTG
CACAATTTCTACGATGAACAATCTAGAATCGCTTATAAAAACTCTACAGT
TGTTGAATTGAATGGTCGAATGTCTTATTCACCAAATTCTCAACAACAAC
AACAAAGATTAGAACCTAAACGTAGTCGAATTCAGCCATCACCAATTCGA
ATGCAAGCGTCCCCAGAGAGTTCATTCACCAATAAAGAAACCACAGGACT
AGAAGGATCTCCTCATCATCATCCAGTACGATCCTCTTCCAAAGAAACAA
CATTCAGTGACCAACATAGCCCAACTCCGACTGAAACATCACATAAATCG
GGACAAGAGGAACAACCAAATCCGTCTATAGTAACCACAAGTAAAATCCC
ATACGCAACGAAGTTTTTATCAAACGAGGATGATTTATTTTCAGCTTTAA
TCGTAAGCGAAATGAAGAATCTAGATGAGAGAAGGCGATACCAAGTCAAA
CATAAAATTTCGAATATTCTATTTGATGCTTTGATGGAGCAATGTAATGA
AAAGAAACAGGACACGGATGCTAGTAGCACAGACAATAACTGAATGGAAA
GACAGATTGAAGTCGATTCGAAAGAGGAGATCAAAAATATGATCGTTGAG
TATCGGCAGGAAACTCCTATCGAGCATCACCAAAGACATCTTCAAAATTT
GTCACCGCAAAGCCAAGACTACGTAGATTATTATATGTCACCAACGCATC
ATTCACATTATGGTGGCATGTCACCAATTTCACCAAATGCACCAAACATG
CCACCAACACAATACCAATATCCAGCACAGAACCAACAAATGTTAAAATC
AAGATTAAGTCCGAACATGGTCTCGACTTCAATGAAAAATGGTAATCGTA
CTAATTCATCTAATTTAGCACATGACCAAGCATTGATTGCTGAGATACGC
AGATTCCCATGTTTGTATGATCGTGCGCATCCAGATTATAAGAAAGTGAC
GGCTTGCCAACACGCTTGGTCCCAAATATGTGAAGAATGCAATTGGGTCA
AAAACAGCGATGAAGCGATACGGTTGTTTGAAGTGTTAAAGAAACGATAC
AGTAAAAAGAAAATGGACTATAAGAGAGCTCGTTTATCAACAGACGAACC
TCTACTCATCAAAAAAGCTGAAACTGAATTAGAGAAATATCATTTTATGA
AGTGGATGGAGCCTTTTATAAGATTCCGAACAACCAAACTGGTCAACGAG
AAATCAAATGCTGACAGGACGACGTATAGAGAAGAACAACATCAAATGAA
TTCCGGTACGAATAAGACAATTGCTGAATATGCTTACGAGCAAACAATAG
GTGGTGGGAGTGGTGCCAACCGAAAACGATCTTATGATTACGGGGCCATG
CCGGTGCACAATTTCTACGATGAACAATCTAGAATCGCTTATAAAAACTC
TACAGTTGTTGAATTGAATGGTCGAATGTCTTATTCACCAAATTCTCAAC
AACAACAACAAAGATTAGAACCTAAACGTAGTCGAATTCAGCCATCACCA
ATTCGAATGCAAGCGTCCCCAGAGAGTTCATTCACCAATAAAGAAACCAC
AGGACTAGAAGGATCTCCTCATCATCATCCAGTACGATCCTCTTCCAAAG
AAACAACATTCAGTGACCAACATAGCCCAACTCCGACTGAAACATCACAT
AAATCGGGACAAGAGGAACAACCAAATCCGTCTATAGTAACCACAAGTAA
AATCCCATACGCAACGAAGTTTTTATCAAACGAGGATGATTTATTTTCAG
CTTTAATCGTAAGCGAAATGAAGAATCTAGATGAGAGAAGGCGATACCAA
GTCAAACATAAAATTTCGAATATTCTATTTGATGCTTTGATGGAGCAATG
TAATGAAAAGAAACAGGACACGGATGCTAGTAGCACAGACAATAACTGAA
TGGAAAGACAGATTGAAGTCGATTCGAAAGAGGAGATCAAAAATATGATC
GTTGAGTATCGGCAGGAAACTCCTATCGAGCATCACCAAAGACATCTTCA
AAATTTGTCACCGCAAAGCCAAGACTACGTAGATTATTATATGTCACCAA
CGCATCATTCACATTATGGTGGCATGTCACCAATTTCACCAAATGCACCA
AACATGCCACCAACACAATACCAATATCCAGCACAGAACCAACAAATGTT
AAAATCAAGATTAAGTCCGAACATGGTCTCGACTTCAATGAAAAATGGTA
ATCGTACTAATTCATCTAATTTAGCACATGACCAAGCATTGATTGCTGAG
ATACGCAGATTCCCATGTTTGTATGATCGTGCGCATCCAGATTATAAGAA
AGTGACGGCTTGCCAACACGCTTGGTCCCAAATATGTGAAGAATGCAATT
GGGTCAAAAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041842XLOC_041842Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066957-proteinTCONS_00066957-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066957-exon-scaffold_462-1575043694:156319..157555TCONS_00066957-exon-scaffold_462-1575043694:156319..157555Clytia hemisphaericaexon
TCONS_00066957-exon-scaffold_462-1575043694:146312..147671TCONS_00066957-exon-scaffold_462-1575043694:146312..147671Clytia hemisphaericaexon
TCONS_00066957-exon-scaffold_462-1510915933:156319..157555TCONS_00066957-exon-scaffold_462-1510915933:156319..157555Clytia hemisphaericaexon
TCONS_00066957-exon-scaffold_462-1510915933:146312..147671TCONS_00066957-exon-scaffold_462-1510915933:146312..147671Clytia hemisphaericaexon
TCONS_00066957-exon-scaffold_462-1491911889:156319..157555TCONS_00066957-exon-scaffold_462-1491911889:156319..157555Clytia hemisphaericaexon
TCONS_00066957-exon-scaffold_462-1491911889:146312..147671TCONS_00066957-exon-scaffold_462-1491911889:146312..147671Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:146312..157555 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.85248 2.63674 1.69897 1.16846 1.82319 1.61486 3.39991 3.57635 2.46633 2.15552 2.34808 1.91953 8.08242 7.90113 7.88776 6.73561 3.94811 6.67589 1.16868 1.99967 2.82976 2.85861 2.2315 2.26106 0.957057 2.0642 9.88015 5.32654 0.148408 0.36961
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006578MADF-dom
IPR004210BESS_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066957 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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