TCONS_00066947 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066947
Unique NameTCONS_00066947
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2656

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066947 ID=TCONS_00066947|Name=TCONS_00066947|organism=Clytia hemisphaerica|type=transcript|length=2656bp
CGCGCGCGAAATTCGCATTTAATAAACGTTTTTTTGGAAAAGTCCGAAAG
TGTCAAGACTTTAGCTGTCAGCTGTCCAAATCAAGTCCAACCATTGCCAA
TTATTGTATTGATCATATCACTAAAAATTTGCTTGGAATTCAAACATGTT
TGAAGAAATATTTGAGGAAAATAAATCCAAGAAAAAAGTTCGATGTATCA
TATGTCAGTGCTGGCTACCATCAAACTCAGACCAAGTGAAAGCTTCTCAC
GTCAATGGGAAAAGCCATAAACAGAAATGTGAATTTAAAGAGAAACAAAG
TCAAACATTGAAGCATAGTGTGTACGTAAAGGGGTTTGACCCTTTGACCA
CCAACCTTGAGACTCGTTTACAAGAATTATTTGAAGAGTTAGGTGGTGGT
GAAGTGGAAGATGTTTACGTTGATAAGAATTCTGCAAAATATTGTTTCAT
CAAATACACATCTGAGTCAAGTGTGGCAGAAGTTTTATCGAAATCACACA
ATGTTTCGTTAGATGGAAAGAAACTTTTCATCAAGCCACGAATGCAACCT
TCAATGCAAAGCGAAGCTGCTAAAAAACAGGAGAAAAGTACAACGAAGAA
GAGCAAGAGCCCTCCTTCTGCTTATGATTCTTCTATCCAAGCTACACTGA
ACGATATTCCAAAGGCTATCAGTTTGATGGATCAGATGTCAAGGTTCAAA
GAAGGATTTGGTCTGTCCCAGGGAGACATGGAGGTCCGAATGTTGATCTG
CCAACTGTTACAAAGTGTCTTGGAAGAAGCATATCCTAATTGTCAAGTCA
AGCTCTTTGGATCAAGTGCCAACGGATTGGGCTGCAAGGGATGTGATTTG
GATATTACGGTACTTTCCGGTGAATCAGATGACAATCTTGAGCAGCCAAC
CTCGATCTTGAAAGAAATGAGAGAAATATTGGAGAGATTTGCACCAggat
ttaagaatatttttttggtGGAATCTCAAAAGAATTGCTCAATCATCAAG
ATGTACCACACTGACTCGGAGTTAAATGTTGATTTAAGTCTGAATAACAG
GTTGGCAATATCCAATACTGAACTCCTCAAAGCCTACATTTGCCAAGATG
ATACcattcaaagtttctttttcacTGTACGCGCATGGGCAAAAATGAAC
AATCTGATTGGTCGAAATGCTGGACAAATGACTAATTACGCTTTGATGTT
GATGATGATACATTTCTTACAACAGCATGATCCGCCATATTTGCTGTGTT
TGCAAGATTGTCATGGTAACAAGTTAACTAACGATATGATTGGACCATGG
GATTGTTGGTTTGCTAAGGAACGAACGGCCGTTAAATCTCGCATTGAAGA
TCCAgGTTTGTTACTGCTCCGATTCTTCAAATTCGCCCATGAGCAATTAT
CGAGTCCAAAAATCATAGCAATCCACACGTTGAAACCacttcaaaaatat
caattgcATCCAGAGTTGACCAGGACCGTTTTCATAACGCAAGACCCTTT
CAAACTATCGCACAACGTAACTCAAAACATCACAGAGGATGGCCTCCAAA
ATTTACAGCAAGTTTTTACTAAGATATTAGGACGActtgaaagcttgaaa
aatttctctctccaCGAGATTATAAGGAAAGAGGCGAAGCTAAAAGTAAA
GGCTAAATCAAGTCATACATCGACAAAAGCTTTTCCTACGGAAGAAAAAC
CAGCTCAAAAGACCAGTAAGCCATCTTCTAATAAGGAAGTATTTGTTATT
GACTTACCACAAACCTCCAAAGATCAGAACGGATGTATTGAGATTGTCAA
AAAGATTCTTACGGAAGATTTGAAGTTAATCATCCAACTTAGCTCCCCGG
CTAACAGCAAAGATACTATGACGAAACATCCAACATTGAATAAGAAACGC
AAAATAATTGATTCTACTCCGTTTCAACCAGActcgaaaaaatctaaaac
catGACTGAAAGCTCTGGTGATTATTCTCAGAAAGCTGAGAAAGAGAGCA
GTTGTCCTGAGGATGTCGAAATTCAACCGTTGAAAGGAAATGAAACTTCT
ATGGCATCAGAAATCATGAATAACGGAGCCGATGCAACCAAAGATGATTC
GATTGCCAGTAATGAAAAAAACATTCATTTATCCAATGATACCTGCATTA
GCTTCACGGGAATTGCATACCAGGAAACATGGACAAGCAGACGAAAGCAG
AGACGAATGTTGGCACATTCTAACCTCAAATCATCCATAGAAACAGTTGG
TAATCCATTGAAATCTGAGGACACTTCGACCAGCGATACGATAGCGGAAA
AAAATGTTAACGTTGGAACTTCCTTAGTGTCTGAAGCAATAAACGGTGTT
TCGGACACGACTCAGGAAGCTCTTAAGGATGACATTAAGCTTAATGTTAA
ATTCGAGATGACGTCAGTACTTAAAGATAATAAACGTAAATTAACAATGA
CACTGTTGCAGGGTGATGTTAAGACTTATCAAATGTTTTTCgcttatttt
aaaaagaaattgatcAACAGTTTTTCTGTTCCATGATAATGTTGtgtttg
ttacttttttatGTCTTTGGTTGCCCCAAGTCAAGAAATATAATCGTGAA
AGAATATGTGTGCACCTTGTCCTCCAGGGGATAGAACTATATTGATTGAC
TTCAAT
Run BLAST on NCBI

transcript from alignment at scaffold_462:107234..121859-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066947 ID=TCONS_00066947|Name=TCONS_00066947|organism=Clytia hemisphaerica|type=transcript|length=14626bp|location=Sequence derived from alignment at scaffold_462:107234..121859- (Clytia hemisphaerica)
CGCGCGCGAAATTCGCATTTAATAAACGTTTTTTTGGAAAAGTCCGAAAG
TGTCAAGACTTTAGCTGTCAGCTGTCCAAATCAAGTCCAACCATTGCCAA
TTATTGTATTGATCATATCACTAAAAAGTAAGTTATCCTTGCCTATTAAT
TCTTCTATGATGAAAAATATCATCGGAATTTTGAATTCTTATAGTGAGAT
TGACAAACATTGAGAGTACAAACAAATCATGATAAATACCGTCAACTGCT
CTCTAACAGTTACATCAATATGCCTTCTTACCTGTCTTTAAAAATATAAA
TAAAAGTAATCACGGAAAAGGACGCGAAAAAAAAAGACATAAGTGTGAGA
ACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGAACAATAAATGTATCAAGGTCTGTTTTATTTACC
CCCTGGTGACTTAACAAAAGAGACTTAGCTCGATGTTACAATCCAATTAT
TGAAAGTTTGTCTCGGCCTTTTTATAATGAGCGAGACATACGTTCTCTGA
TTACGCAATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTGTCT
AACTTGGGACGATGGGTCATGGGACTGGTTGATTGGTATCTGGCCTGTAT
TTTCACATGTTTTCACTTACAATTAAATCTCTTTGACAACAAATTTGTTT
TGATAACCTCACCAAGTTTATTAATCATACTTCTCCGTTCCTCTTATAGA
TAGAGTGCACAGACACTCGTGTGTGTTCCACTACGGATTTTTTTCATATT
TTGATTTAAAAGCCTACTCGGTGCGAAAGAGAAATCATGTATTTTTAATA
CTTTAATCTAATGTCTAACGACTTTGGAGGTTCGGTGAAATGGTGGCCGT
GTATTGATTGTCGTCCCATGTTTTGTCAGTACATAACTACTGTCAACTCT
CCTGCATTGAGCGGGAGACTCCCGCATGTCAACGATTTCTCCCGTATGAA
GAAAATTCTGCCAAATCTCCCGCATTTCCAAAAATTTTCCGATTTTGGAA
AAACCAAATGGTGAAATTTCTGGATTTTGAAAGATCAGAACAAAAAATTC
CCCAATTTCCCGGAAAAAAATTCCAATAAAATCAGATTTTACGAGAAAAT
TTCCCAGATTTTACGATTTTGAAAAATCGGATTATCGAGGAAAGTTTTTC
CGACTTGGAGCTCTCCCGCATTTTTGTGAGGCAAAGTTGACAGCTATGAA
GTTAGAGCAGTTGACGGGTGTTGACGGTAAACACACTTAATAGAGCTTTT
TGAAAAAGAAAGAAACTGAGAGGGTTCATAGTCCTCCAGAGGATAAGTGG
TTGTAAAGATATTATAATTTTAGTGTAAAAAAATTGACTAAAAATGTAAA
AAAGAAGATTAGGAAAATAGTAGCTAGCTTTATTCTTAGTATTACAGCTC
TAGCTAGAGATCTGCAATTTTTTGTTAAGCACAATTCGTCTTCAGGTTTC
CATAAAATCTTCTTATTGTGAGAGTTTATAATAGAATTGACGTTTTCAGT
ACAAGAGTACTTTGACACTGTTTTTGTTGAAAACTGAATATAGTTTGTTT
GCTTTTTTAAAATTTTTATCAATGACTTTTTCAGGAAGATTTTGCCTACA
TTCGTTGAGACGTTTTTATTGTACGGGGGTTGAACCATATAATTTTTTCG
CTTTCTTGAAAGACAGGTTTCTATATTTTGGTAGGTATTTTTAGTCAGCC
CAGAGGTGACCCTTCAAATCGGTTTCGTAATTTTTTGTCAGCCGCCGCTG
ACAATAAGTGCTTTGGATTTGTTTTTTAATTCCGATTTTTTCCAGATTTT
GTTCTCTACAACCGGGTTGTAATAATATGTGTGCGTCAAGATGCGCTGTA
ATTTCATTATGATTTCATAAAGCACGTTATTGCATCAGTCGTATTATACG
ACAAACAATTGGTCAAATCTTCTAAATGCTCTAAGAATGATTACACGCTT
TTTTTATAGTGTACTTTGGATGAGGGTTAAGAGCCATTTTTTTTAAGAGT
CTTCAGGGTGTGATACCTCACCCTCTTGGATTTTGCTGAAATTTAGACCA
AATGATCTATCACACAAGAAAATANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATT
CTCCCCGAAAATCTCTAGCACCTCTTGTAGAGGGCTTCAAACTTTGCGTA
ATCTGGGTTTGGAAGCACTTTTAGCTGGCTGCTGATGGTCCTTGGTACTT
TTTTGAAGTAAACTTTTGACCTGGAGTGGTTTACTGGTGGGTTTTGGCCA
CAAAAATAACGTTTTCAGGATTTCCATCTTTGCGTAACCGTCAAAAATGG
CCGAAAAAATTGCTATTTTGGCAGACCTGGAGCAAAATTCAAGATGGCGT
ATCTTTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTGAAAATTTGCTTAACTTCGTTGTTTT
CTCCCTCTTAAAATGCTAAATCAGGCCCACTTAAGGGCTCTAACAGGATA
ATTTTTCTCAAAATATTGGTTAATCTTCTCCAGCCAACTAATCATTGGCA
TTAGGGGAACAACTGAAAAAGATTTCAGGTCATTTCCATCAACAGATGAC
ATTTTATGACAGTTAATTACAGAATATGTAAAAAAATGAGACTGACATCT
GGCGTTTCCTACCATTCCAGGGCCTATATTTCCAGAAAAAAACTCAACCT
TTCACTGTTTGGTGAATATTAATCTTAAATATAAGCAGGTTACTTCAACT
TAATGGGTTTAACAATACTCAATTGGTTGCCGAAAAGGCGCTATGTGGGG
AATTACAGTGTCTTGGAGGGCAGTGAAAAGTTTCTCTTGGTCATGAACCA
CTGAAACCTTTGGGGTTGATGGTGGTTTACACCCTTAGCCAATCCTCAAG
AATACTCTAAGGGGTCCCTTGTGCCAAACCAGGCTTAACAAGCCATGACA
TCCCTGAGAAATTTTGCTAGCGCTTTGCCAGAAGTTAGTCCAGTGGTAGG
GCGTTGGGCTCGCGCACTAGGGATCCCGGGTTCGGGTCGACTTCAAAATT
TTTCACCAGGTTTTGATATTTTATGTTTTTTTGGGTGTAGATTCCGAAAA
AATGGTTCCGAAGTCCTGAAAAGTTGAAGAAACGGCGCTGATTGCACCAA
GTTCACTTTTACAGGGGTTAATAAGACGGCAGGGTTGTTTTTGATAGAAG
TTTGGTTTATGGTCTTTCAACGTGATAAAAGCTTTGCCTGAAGGTGCAAG
AATTTCTGCGTGTTCGTGGACTTTGTATGAAGTTGCTATGTGTTTTGCTT
TGTTGTTGATTAGCAGATTCGAGGCTGATAGGTGCTTTTTGGTCATTTTT
GGTTACATTTTCATATGAAAAAAAGCCATATGGTTACTGTTATGTTCCTT
GTGCATTTCTACTTTTTCTTCTAGTTTGCTTGGAATTCAAACATGTTTGA
AGAAATATTTGAGGAAAATAAATCCAAGAAAAAAGTTCGATGTATCATAT
GTCAGTGCTGGCTACCATCAAACTCAGGTAAGTCTTGTTGACTTTATAAA
ATTGTCATTGTTGCTCATCAGGGAATTAGAGTGATGTCAATTTGTAAAAC
CTGTCTTGGTTATCCTGTTGACATAGGTGGGTAAATCCAGCATTCAGCTT
AAAATCTACATAAATCAGAGCCTACAGTAAATTACTTTTTGATAATAATT
GATCTGATTTAAACATGCCCTATAAAAAAATGGCTTGGCTTTAAAACATT
GCTAGTCTTAGAAAAACTTGATAGTTTAATACAAAATTTGTTTTGTTGTC
AATGATAATGTTGAGTTAATGAACTAAAAATAACTGGCCAATTTAATCAA
TAATTTCTTGCTACGAAAAATTTAAATTTATTTGAAAGATTATGAAAAAG
TTTGAAAATGATAAAATCACTAACTTTGTAGCATTGTACTTAAAAAATTC
AAAATTTTGTCTGAATATATCTTTTTGGTATTTTAGTATCCTGTGTTACT
AAAAGGATTTTTTATTTTTTTGGGTATTATACCACCACGTCACTAACATC
ATGATGTGGGATATTTTATTACTGACCACTTCCCCTGTAAGCTAGAGATT
TTATACATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCATTTCTACTT
TTTCTTCTAGTTTGCTTGGAATTCAAACATGTTTGAAGAAATATTTGAGG
AAAATAAATCCAAGAAAAAAGTTCGATGTATCATATGTCAGTGCTGGCTA
CCATCAAACTCAGGTAAGTCTTGTTGACTTTATAAAATTGTCATTGTTGC
TCATCAGGGAATTAGAGTGATGTCAATTTGTAAAACCTGTCTTGGTTATC
CTGTTGACATAGGTGGGTCAATCCAGCATTCAGCTTAAAATCTACATAAA
TCAGAGCCTACAGTAAATTACTTTTTGATAATAATTGATCTGATTTAAAC
ATGCCCTATAAAAAAATGGCTTGGCTTTAAAACATTGCTAGTCTTAGAAA
AACTTGATAGTTTAATACAAAATTTGTTTTGTTGTCAATGATAATGTTGA
GTTAATGAACTAAAAATAACTGGCCAATTTAATCAATAATTTCTTGCTAC
GAAAAATTTAAATTTATTTGAAAGATTATGAAAAAGTTTGAAAATGATAA
AATCACTAACTTTGTAGCATTGTACTTAAAAAATTCAAAATTTTGTCTGA
ATATATCTTTTTGGTATTTTAGTATCCTGTGTTACTAAAAGGATTTTTTA
TTTTTTTGGGTATTATACCACCACGTCACTAACATCATGATGTGGGATAT
TTTATTACTGACCACTTCCCCTGTAAGCTAGAGATTTTGTACATTATATT
TTATATTTTTCTTGTACAGACCAAGTGAAAGCTTCTCACGTCAATGGGAA
AAGCCATAAACAGAAATGTGAATTTAAAGAGAAACAAAGTCAAACATTGA
AGCATAGTGTGTACGTAAAGGGGTTTGACCCTTTGACCACCAACCTTGAG
ACTCGTTTACAAGAATTATTTGAAGAGTTAGGTGGTGGTGAAGTGGAAGA
TGTTTACGTTGATAAGAATTCTGTAAGTTGTTTTGTCATTTAATTTGAAC
TATCAAAATAACTTCTCTGGTATTGATGCTATTGCGAAGGAAGAATGTAG
CCTTACTCATATAGTCTTAACAAAGAGTATGTTCATATAGAGGGGTTAAA
AGGCTAAGAATGAAATGAAATAACTATTCATCCAAGAATCTATATATTAA
TAGCGGTATTCTGTATGTCGTTTTGTTTGTCTGTCTGTTATACTTTCGTT
TTCGCACGCAATGTTTTTGTTCTTCCAAAAGATAACTTTTAGTTCTTGCT
ACACAAATGTGTTAAATCAGATTCGCGCCGTTTTATAAAGACTTTGTTTT
GATTGATAGATTAGACTTTTTCTTTTTTTTTCTTTCTTTTCTTTTGTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTGTTTTCGAATGTAATTAACGACCTTATTTGATTT
GAGACATTCGAATTCTTTTCAAAACAAAAGAAATCTTTTAAACAGAATCT
GTTAAAGAAAAGAACCCACAAATATAAAATAAAACACAAGAATCACATAA
CAAGTTTGTTAGAACTGGTTAGAACAACAGCAACATTAAAAATACATTCA
AAAGGCGGTAAAAACTAGAATTCTTTCTTCGTAAAAAGGGACCTTTAAAC
ATGTATGTCGATAATTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGCTTTTTTGTCTGCGTGTCCTAGCTGCCTTCCGGGGGGACTAT
GGTTGCGAGCTGACTTTCGGCCCTGCCCCTCGGACCCTTAGCAGAATAAA
GAGGAGAGGAAACAAGGGAAATTGTGTGAATTTTAATTCACTTTTTGGAA
CGGGACTGAAGTTTGATTTCCGATTTTTCAAACTGCCATGTTTAAAAAAA
GGCACCCTTAAGGCACCCTTAAGGCCGGCACATACCCATACCCATACCCT
TCTCTTGCCTAAGTACCCCCCCCCCCGGGCTGCGTTTTTTCGACGAATCG
CGTGTCATGTCTATTATTTCACTCCGCTTATCTTGACATCAAAGTTTTCC
TAAACACCAAGAACTACGGCAAATATAAAGCGAGCGAAGCGAGAAAAAAA
ATTTAATTGCAGAGCCGTCTCGGACGTCGCTGGTCGCCGGTATGGTGTAA
TTTGGGAATGACGTCCTTTCTGTTTTCTGATCATTTTTGCCACAAAAATC
TTTTTCAAAATAATGGTTAAAAGCTATGTCACCCGGGAGGGATAGAGTCA
AACTTTGAAGAGAATTCTTCCCTTTAATTTTGATTTCATCGTGTTTAAGC
CACCTTCCCAACATCTCAAAGGACTTTAAATGCGTTCAGCAAACAGCTAA
ACCGGCGTGCGACGCCGGGTACCGGCTAGTATCTTTTAATATTTTATATG
AAATCTTGCAAATAGTTTCAAAAGTTTTCAGAGGGTTTTTTACGGGCATG
GTACAGAATATTATGTCAGTTTTAGTATACTAACTAATGTAATATATCTC
CTGTGTTTCGTTTATTAGGCAAAATATTGTTTCATCAAATACACATCTGA
GTCAAGTGTGGCAGAAGTTTTATCGAAATCACACAATGTTTCGTTAGATG
GAAAGAAACTTTTCATCAAGCCACGAATGCAACCTTCAATGCAAAGCGAA
GCTGCTAAAAAACAGGAGAAAAGTACAACGAAGAAGAGCAAGAGCCCTCC
TTCTGCTTATGATTCTTCTATCCAAGCTACACTGAACGATATTCCAAAGG
CTATCAGTGTAAGTTTTTTAAATGGGATCAAAAGAGTATTTTACTGTCAT
ACTTTTGGTAACTGAAAGGTCGGTTTGTAAATTGACTTTCTATCAATCAA
CTTTACAAGTTTCTAGATTCATTCTGAATAGCTGTTTCGGCATCATCAAA
AGGATCGGAATTTCAACAGAATCACCCTTTCATGTATGCAATCCTTTTCT
ATCTTACAGTTGATGGATCAGATGTCAAGGTTCAAAGAAGGATTTGGTCT
GTCCCAGGGAGACATGGAGGTCCGAATGTTGATCTGCCAACTGTTACAAA
GTGTCTTGGAAGAAGCATATCCTAATTGTCAAGTCAAGCTCTTTGGATCA
AGTGCCAACGGATTGGGTGAGTAATATTGTGTTTAGAGCCTCTTCCTGTA
AGTATCAGACATATTCCGGGGGGTACTTCCCTTGCCGACCGACGGGGGTG
CTCCGCCGAGGCTAAAAAAATGAACCCACTCGTTTTTTCAAAAATTTTGC
AGAAATTTGCGAAAAAAGGGACCCTGAATTGGACTGAAATTCCGAAATTT
TCTTAAATTTTCCCCAAATTTTCCAAAAAAAGCACCCTACGAGGGACTGA
TTTTTCTATTTTGGTGTTTTTGCGAGAGGCGCATCCCCGTAACCCATTTT
GCCCTACACCCTNACTGAAATTCCGAAATTTTCTTAAATTTTCCCCAAAT
TTTCCAAAAAAGCACCCTACGAGGGACTGATTTTTCTATTTTGGTTTTTT
TGTGATCCTACCTGGGACTCGTAGAGCTGCCCTGACCAGAGGCGCATCCC
CGTAACCCATTTTGCCCTAGTACCCCCACTCCCGGTGACAAGGTCAGAAA
CCTTCTCGGAATTTGTTGATTTTATATATTTTGTTCATATCAAACGGAAA
TATTAGGTATAACCATTAGGCAACAATTTTAGAGGTTGATTTGTAAATTT
TCTCGTAAATGTTAAGAGTACTTTCAGGGTATGTATAAAGAAAAAGGCAT
TATACCTATATTTGAGTATATTTTCTCTTCAGAATGGCTAGAAAGATGTC
AAATAGGGTTTTCAATGAAAAATAAGATATGTTGTAGTAGACTTTTTAAA
GTGGTTTATGATAATAGCGTTTTCCTATAGAAAATCTTCAAAAACTTAAT
TTTCTTTGACTCCAGGCTGCAAGGGATGTGATTTGGATATTACGGTACTT
TCCGGTGAATCAGATGACAATCTTGAGCAGCCAACCTCGATCTTGAAAGA
AATGAGAGAAATATTGGAGAGATTTGCACCAGGATTTAAGAATATTTTTT
TGGTGGAATCTCAAAAGAATTGCTCAATCATCAAGATGTACCACACTGAC
TCGGAGTTAAATGTTGATTTAAGTCTGAATAACAGGTATATTTGAATTAA
AGTTTTATCGCTGAGCAGTTTAGTAAAAAGCAAGAAGAATCTTCATTGAA
TCGTAAATCTTGGCTAGCATCGTAAATCTTGGCTAGCTATTTCTGTAGTT
AGATATTTTTTGACGCCGGTCTGTGTCAAGATAATTTAAAACGATGTATC
TTAAGGTAAGAAGTTTTAGCGGAATTAGATTTCGCGGTACACAGCTCAAA
ATTTGATTTTAGGGCTGATTTTTTTTAAATCACGAGAACATTGCGGAAGT
AATTTCGCGGGTTTGTCAAAAAAAACAACCGAAATTTAATTCCGCAAAAA
ATTGTTCTGGAAAAATTTGTTCCCTTCAAGGTAAGCTTTTCCCAGAGGTT
GATTCCAAGCAAAAATTTTCAAGTCCCTTTTAGTTAAAATCAAACATACA
TTTTTCATTTCTCAGGTTGGCAATATCCAATACTGAACTCCTCAAAGCCT
ACATTTGCCAAGATGATACCATTCAAAGTTTCTTTTTCACTGTACGCGCA
TGGGCAAAAATGAACAATCTGATTGGTCGAAATGCTGGACAAATGACTAA
TTACGCTTTGATGTTGATGATGATACATTTCTTACAACAGCATGATCCGC
CATATTTGCTGTGTTTGCAAGATTGTCATGGTAACAAGTTAACTAACGAT
ATGATTGGACCATGGGATTGTTGGTTTGCTAAGGAACGAACGGCCGTTAA
ATCTCGCATTGAAGATCCAGGTATCTTTTTTATTTTAACCTTTGTAATAA
TGAATCCTAATCTACAGGTCATTCATTATACGCACACCACGCTCTGCTCT
AAGGGATATTGCGAATGTAATGATCTAATGAACTGTTTTTTCAGCCAAAA
CATTCAAAACTGCGTTGCTTTTTGCTTAAAAACGAAAGCAACCGTGTTTT
GATGTTTATGTTTATGGTTTGATTATAATTGACATTTGTTTTTGAGCCAA
TCACTGCGCTCAAAAGCTTATTTTATATACCTTAAAGGAAGAAATTTTGG
CGGAAAGAAAATTTGGCGGATTTGGCGGATTTGACTGAATTCCGCCAAAT
TAAGTTCCCGCCAAAATTTCTTTTTTCCGCCATCCGCCAAATTAAATTCC
CGCCAAATTATACATTTTGAAAATATGATCTCTTTTANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCATCCGCCAAATTAAATTCCCGCCAAATT
AAACATTTTGTTTAAGGTGCTTTTGCTATTTTTTCGCTGTTTTGACGCCA
TCTTAAGGTTAAATTTTAAGCGACCGCCAAATTAAATTCCCGCCAAATTT
AGTTTTTTCGTCCATCCGCCAAATTAAATTCCCTCTGAAAAAACTTTTTT
GGCCATCCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTTCGTCCATCC
GCCAAATTAAATTCCCTCTGAAAAAACTTTTTTGGCCATCCGCCAAATTA
AATTCCCGCCAAAATTTCTTCCTTTAAGGTACATCTCAAAGATGCCCGCA
AACCTTGGCAGATTTTCTTACTAAGCCATAGCTTTAAGGTTGATTACGTA
ATCATGCACAGGGTAATCAACATCTGCTTGGAGATTATACAGTAGACCTT
TATAGATTTCTCATACGCGATTATAGTATGTTGCCAGTCAAAACATATTA
TTGATGTCGCCTTTTTTTTTTACAGGTTTGTTACTGCTCCGATTCTTCAA
ATTCGCCCATGAGCAATTATCGAGTCCAAAAATCATAGCAATCCACACGT
TGAAACCACTTCAAAAATATCAATTGCATCCAGAGTTGACCAGGACCGTT
TTCATAACGCAAGACCCTTTCAAACTATCGCACAACGTAACTCAAAACAT
CACAGAGGATGGCCTCCAAAATTTACAGCAAGTTTTTACTAAGATATTAG
GACGACTTGAAAGCTTGAAAAATTTCTCTCTCCACGAGATTATAAGGAAA
GAGGCGAAGCTAAAAGTAAAGGCTAAATCAAGTCATACATCGACAAAAGC
TTTTCCTACGGAAGAAAAACCAGCTCAAAAGACCAGTAAGCCATCTTCTA
ATAAGGAAGTATTTGTTATTGACTTACCACAAACCTCCAAAGATCAGAAC
GGATGTATTGAGATTGTCAAAAAGATTCTTACGGAAGATTTGAAGTTAAT
CATCCAACTTAGCTCCCCGGCTAACAGCAAAGATACTATGACGAAACATC
CAACATTGAATAAGAAACGCAAAATAATTGATTCTACTCCGTTTCAACCA
GACTCGAAAAAATCTAAAACCATGACTGAAAGCTCTGGTGATTATTCTCA
GAAAGCTGAGAAAGAGAGCAGTTGTCCTGAGGATGTCGAAATTCAACCGT
TGAAAGGAAATGAAACTTCTATGGCATCAGAAATCATGAATAACGGAGCC
GATGCAACCAAAGATGATTCGATTGCCAGTAATGAAAAAAACATTCATTT
ATCCAATGATACCTGCATTAGCTTCACGGGAATTGCATACCAGGAAACAT
GGACAAGCAGACGAAAGCAGAGACGAATGTTGGCACATTCTAACCTCAAA
TCATCCATAGAAACAGTTGGTAATCCATTGAAATCTGAGGACACTTCGAC
CAGCGATACGATAGCGGAAAAAAATGTTAACGTTGGAACTTCCTTAGTGT
CTGAAGCAATAAACGGTGTTTCGGACACGACTCAGGAAGCTCTTAAGGAT
GACATTAAGCTTAATGTTAAATTCGAGATGACGTCAGTACTTAAAGATAA
TAAACGTAAATTAACAATGACACTGTTGCAGGGTGATGTTAAGACTTATC
AAATGTTTTTCGCTTATTTTAAAAAGAAATTGATCAACAGTTTTTCTGTT
CCATGATAATGTTGTGTTTGTTACTTTTTTATGTCTTTGGTTGCCCCAAG
TCAAGAAATATAATCGTGAAAGAATATGTGTGCACCTTGTCCTCCAGGGG
ATAGAACTATATTGATTGACTTCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041840XLOC_041840Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066947-exon-scaffold_462-1575043694:121733..121859TCONS_00066947-exon-scaffold_462-1575043694:121733..121859Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1575043694:114447..114549TCONS_00066947-exon-scaffold_462-1575043694:114447..114549Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1575043694:113638..113840TCONS_00066947-exon-scaffold_462-1575043694:113638..113840Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1575043694:111602..111841TCONS_00066947-exon-scaffold_462-1575043694:111602..111841Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1575043694:111244..111400TCONS_00066947-exon-scaffold_462-1575043694:111244..111400Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1575043694:110225..110444TCONS_00066947-exon-scaffold_462-1575043694:110225..110444Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1575043694:109490..109794TCONS_00066947-exon-scaffold_462-1575043694:109490..109794Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1575043694:107234..108534TCONS_00066947-exon-scaffold_462-1575043694:107234..108534Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1510915933:121733..121859TCONS_00066947-exon-scaffold_462-1510915933:121733..121859Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1510915933:114447..114549TCONS_00066947-exon-scaffold_462-1510915933:114447..114549Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1510915933:113638..113840TCONS_00066947-exon-scaffold_462-1510915933:113638..113840Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1510915933:111602..111841TCONS_00066947-exon-scaffold_462-1510915933:111602..111841Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1510915933:111244..111400TCONS_00066947-exon-scaffold_462-1510915933:111244..111400Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1510915933:110225..110444TCONS_00066947-exon-scaffold_462-1510915933:110225..110444Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1510915933:109490..109794TCONS_00066947-exon-scaffold_462-1510915933:109490..109794Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1510915933:107234..108534TCONS_00066947-exon-scaffold_462-1510915933:107234..108534Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1491911889:121733..121859TCONS_00066947-exon-scaffold_462-1491911889:121733..121859Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1491911889:114447..114549TCONS_00066947-exon-scaffold_462-1491911889:114447..114549Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1491911889:113638..113840TCONS_00066947-exon-scaffold_462-1491911889:113638..113840Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1491911889:111602..111841TCONS_00066947-exon-scaffold_462-1491911889:111602..111841Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1491911889:111244..111400TCONS_00066947-exon-scaffold_462-1491911889:111244..111400Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1491911889:110225..110444TCONS_00066947-exon-scaffold_462-1491911889:110225..110444Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1491911889:109490..109794TCONS_00066947-exon-scaffold_462-1491911889:109490..109794Clytia hemisphaericaexon
TCONS_00066947-exon-scaffold_462-1491911889:107234..108534TCONS_00066947-exon-scaffold_462-1491911889:107234..108534Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:107234..121859 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.63911	3.5063	0.902875	0.746809	6.8432	4.6428	5.2565	6.4131	4.88703	4.99404	5.42754	5.27212	6.20493	6.19854	2.85263	2.99947	2.74275	3.02319	0.917025	0.741876	1.99055	1.44612	12.4511	10.466	10.5773	10.6626	0.984073	1.21996	8.21505	10.3455
Blast
[Close]
BLAST of TCONS_00066947 vs. Swiss-Prot (Human)
Match: TUT7 (Terminal uridylyltransferase 7 OS=Homo sapiens GN=ZCCHC6 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.158e-30
Identity = 92/321 (28.66%), Postives = 165/321 (51.40%), Query Frame = 2 
Query:  659 PKAISLMDQMS-RFKEGFGLSQGDMEVRMLICQLLQSVLEEAYPNCQVKLFGSSANGLGCKGCDLDI--TVLSGESDDNLEQPTSILKEMREILERFAPGFKNIFLVESQKNCSIIKMYHTDSELNVDLSLNNRLAISNTELLKAYICQDDTIQSFFFTVRAWAKMNNLIGRNAGQMTNYALMLMMIHFLQQHDPPYLLCLQDCH-GNKLTNDMIGPWDCWFAKE-------RTAVKSRIEDPGLLLLRFFKFAHEQLS-SPKIIAIHTLKPLQKYQLHPELTRTVFITQDPFKLSHNVTQNITEDGLQNLQQVFTKILGR 1585
            PK ++++DQ+  +  + F  +  + + R  I Q L+S + + +P  ++ LFGSS NG G K  DLD+  T+   E+ + L+   +I +E+  +L + + G +NI  + + K   I+K +H  S L VD+SL N LA+ NT LL AY   D  ++   +T++ + KM ++   + G +++YA  LM+++FLQQ +PP +  LQ+ + G K     +  W+ +F  +        +      E  G L L   +F  E+      +I+I     L  ++   + T    + +DPF L+HN+   ++      + + F  I GR
Sbjct:  995 PKFLNILDQVCIQCYKDFSPTIIEDQAREHIRQNLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTI-EELARVLRKHS-GLRNILPITTAK-VPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFK--KQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAF--INGR 1308
The following BLAST results are available for this feature:
BLAST of TCONS_00066947 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TUT72.158e-3028.66Terminal uridylyltransferase 7 OS=Homo sapiens GN=... [more]
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