TCONS_00066935 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066935
Unique NameTCONS_00066935
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066935 ID=TCONS_00066935|Name=TCONS_00066935|organism=Clytia hemisphaerica|type=transcript|length=1185bp
ttacagaaaaataaatagaaagacaagaaaaatatacaattcaaataaaa
aacacatAATGGCTGGAATATATCATCCATCTCGCGGTGGAACGCGTGGC
GGTAAAGATCAATTCAACTGGGATGACGTCAAAGGAGATAAAGAACGTGA
AAACTATCTAGgTCATTCTATAATGGTACCTACAGGAAAATGGCAAGAAG
GAAAAGACTTGATATGGTACACACGAGATAACAATAAATCGCAGACTGAA
AAAGAATTAAAGAAAAAACAGGAATTGAAAGCTGTGAAAGACTTAGAAGC
TCGTGCTATGGCGGCCGCTTTaggtCACAAGTCATTTTCAACAGGTACAA
CATCATTAACAGCTAAGGAATTGCAAGAAGTTTTATCACGTGGCAAAACA
GAGCACGGTGGTGGTGAACGGATACAAGGTGTCGGACATAAGAAATCTTC
CTCATCAAAGTCACAAAATTCTGGGATGTCATTTCAGGGTTTTGATTCGT
CGAAAGGTGGTCGATCAGATGGAGAGGGTCAGGATGAAAgCGGCTCTTCA
AAGAAGAAGAAACGTAAGAAAGAAAAGAagtcgaagaagaaaaaaaagaa
gcatCACAAACAAACATCCGATACCGATGAAAGTTCCGACGGTGATGATC
GCAAGCAGAATTCCCGACGTCGTTCCTCTGATCGTGGCGAACATTCCCGA
CATAAATATGACAATTCTCGTCATAGAAATGATAATTCTAGCTATAGAGA
CGAAAGTCCTCGACGCAGAGACGATAATCGAAGTTATAGAGACAAAAACC
CTGCCCAACGTATGAGCGAAAATTCTCGGTATAGAGACGATAATGCTCGA
AGGTCACGTAACCAAAACGAAGATAAACCTTTTCACCGTCGAGATGATAG
ACGTTCAGAGACAAACGATAAACGATCTCGTCGTAAATCGAGAAGTCGTT
CTCGTTCTCGCTCAAACGAGAGGACCCGTTTTCGTAAAAACGAGGAAAAA
CGAGGACGCCGTAGATACGATAGTTCTTCCTCAAATGACGGTCGCTAGTT
TTTTATCAAgccattttttaatattttattgtttttatttatttaaaaaa
ttatctatttttatctttttcgcTATCAGAATAAAATAGTACAAGACGTT
CAAGTTAATACCTATCCGTAGAGTCAGTAAACAaa
Run BLAST on NCBI

protein sequence of TCONS_00066935-protein

>TCONS_00066935-protein ID=TCONS_00066935-protein|Name=TCONS_00066935-protein|organism=Clytia hemisphaerica|type=polypeptide|length=348bp
YRKINRKTRKIYNSNKKHIMAGIYHPSRGGTRGGKDQFNWDDVKGDKERE
NYLGHSIMVPTGKWQEGKDLIWYTRDNNKSQTEKELKKKQELKAVKDLEA
RAMAAALGHKSFSTGTTSLTAKELQEVLSRGKTEHGGGERIQGVGHKKSS
SSKSQNSGMSFQGFDSSKGGRSDGEGQDESGSSKKKKRKKEKKSKKKKKK
HHKQTSDTDESSDGDDRKQNSRRRSSDRGEHSRHKYDNSRHRNDNSSYRD
ESPRRRDDNRSYRDKNPAQRMSENSRYRDDNARRSRNQNEDKPFHRRDDR
RSETNDKRSRRKSRSRSRSRSNERTRFRKNEEKRGRRRYDSSSSNDGR
Run BLAST on NCBI

transcript from alignment at scaffold_462:928669..933224+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066935 ID=TCONS_00066935|Name=TCONS_00066935|organism=Clytia hemisphaerica|type=transcript|length=4556bp|location=Sequence derived from alignment at scaffold_462:928669..933224+ (Clytia hemisphaerica)
ttacagaaaaataaatagaaagacaagaaaaatatacaattcaaataaaa
aacacatAATGGCTGGAATATATCATCCATCTCGCGGTGGAACGCGTGGC
GGTAAAGATCAATTCAACTGGGATGACGTCAAAGGAGATAAAGAACGTGA
AAACTATCTAGGTATGAAAATTAATAATACCCTTTTTGTTATTTAAATTC
AGCTGGCACCAAAATGAAATACTCGATGTTGTAACAACGTCGTCAAAttc
ccgctaggaactaacgttatattgCCAGAGGTACTAGATTATGACCAatt
ggaaaaagaagaagaataaaAGATATGGAGAAATAATATGATTTCCGTCT
TGCCAGTAAGAGAGGTTTTGCTTAAGCCAGGTTGCTTcttctgaaaagaa
aaagctTATTGAGATTTAGGGTTAACCAATGAGTTACCGAGTTGTTCTAG
GAATCGGAATTGAAAAtatcttacaaaaaaataagcggaagaatgaaatt
tgacaattttctttgttttaaggTCATTCTATAATGGTACCTACAGGAAA
ATGGCAAGAAGGAAAAGACTTGATATGGTATGTAATTTAAAGTACTCACT
CTAGTTTTAACACGTGTTAACTTTATTTCCTACAGAAATATTTTGCAGGT
CTTGCAGCTCTTGTTCGTTCGAGTAAGAAAAGTTATTTGAATTCTTGGAC
CGTCTTGAAATTATCTGGATGNCTCTTATTCGTTCGAGTAAGAAAAGTTA
TTTGAATTCTTGAACCGCCTTAAAATCATCTGGGAAGCTCTGAAATGGTT
TAGATTGATAACCGTAAAACCTTAAAGAATCATAAACGGCTTGTAATGAA
ACAATACTCTTTCCGAATTTGTGGGTCTAGAGTTGATATGAATTATTATA
GCTATGTTTTTTGCATGATAATATTGTAAGAAAGTGAActctcattttct
ttttttaattgtttctagGTACACACGAGATAACAATAAATCGCAGACTG
AAAAAGAATTAAAGAAAAAACAGGTTTGTATTCAGTGTTTTAATTTGTAC
ATATGATTTTTCAACTTCTTCTTTAATTTAGTAAAGAAGCAGGGTGATTT
TATGATAAATGTCTTTTTTTCTGTCAATTtgattttgttcttttcttcAG
GAATTGAAAGCTGTGAAAGACTTAGAAGCTCGTGCTATGGCGGCCGCTTT
GTAAGTTGTTTTATTAATGTTCTTCCTGACTAATTTCATACATATCTTAA
TTCATagtttatatttcttttgatacTAATTTTCCTTAACTAATGGCCCC
CGGGACGTCGATTTCTCCCTGATCTTATACATATTTTTTACTGATTAGTA
CATTAGTACTTTCAATTGAATCcattgtttttctattttagaggtCACAA
GTCATTTTCAACAGGTACAACATCATTAACAGCTAAGGTACGTACAAATA
GTTTTCTTATCTTTAAGATAGTTGATGCCGTTCTTTGGAatataaattct
tttttcttttctgttctCTCCTTTGTTAGCTGTTactacttaaggagata
caaATTCCACTTGTTAGCccaaatgttaatttttaaagattttgtgtaGG
ATTATCTTCTCGGCACAGGTCTTAGTGGTTGCTAAATCAATTCTGCCTCA
ACTCAACTTTTCGGCCCTAACGTTCACTTGTTTTATTCATGGTAGGAATT
GCAAGAAGTTTTATCACGTGGCAAAACAGAGCACGGTGGTGGTGAACGGA
TACAAGGTGTCGGACATAAGAAGTAAGAGTCAAATGAAAGGATGTCACTC
TCAGGGCAGGATAAATAAAATTCCCTCGAGACAAATTTCTAGATTCTCCA
CTTATTtcccaaaaaggtaccctacgagggactgatttttctattttgga
gTTTTTGCGACCCTATGTGGGTGGGACTCATGGAGGTGAAAGCCACACAT
CCCCATACCCCTATCATTACAGATATGACTGTTTTTAGAGCTTTAATTTC
AGGTTCACTTAAAGTTCCAAGTTCAGATGAATTGAAGTTGATTAATTTAG
TTTACTTTATGacctttataaaaatcaaactttgctTTCAAAAGCATAAC
TGAATGAATTCGAGGGGTGGAGTTGATTGACAGCCAGAAGGATTGATTGA
CAGGTACAGATAGAAGAACACTTTAACACTgtttccattgtatttttaaa
ggaaaatgaacacatAATGCCTTGTattttaggaaaatgaacacATAATG
CCTTGTattttaggaaaatgaacacATAATGCCTTGTattttaggaaaat
gaacaTTACATCTCTtatattttgaaggaaaatgaatgtGACGTGTCTTG
TATCTTGAAGgaaaagaaaatgatgaaaatgattgttACATGTATACCTT
GTGATTGTTACATTATACCttgtatttttttcatggaaaatTAATGTTGA
ATGTCCTGTATTTTAGAAGGAAAATATAACCTGCACATCAAGAAAATGGT
TGTTACTTGTATATTCTGTATTTCTAAAGGAACATGAATGTGACgtgtct
tgtatttttgaaggaaaacgaAAATTACACTTcttatatttcaaaaagaa
aatgaagactgcttttttgttttttgaaggaaatGAATGTCGCTTGTcat
gtatttttgaagaaaaatgatTACTGGATGttctgtatttttgaaggaaa
atgaaatttgcatatcttcaatatttgaaagaaaattagtgttatgtgtt
ttgtatttttaaaggaaaacgagtattacatttctgatatttcagaaaga
aaatcaagaaatgcttattttgttttattgaatgaaaatgaaacatggcc
ttgtcttgtcttgtcttgcatttttgaaggaaaatgaaatctgCATCTGC
ATCTCTTATTTGTTTGAAAGAAAAGGAATGTTAAATATCTTAGATTATTA
CACGACTTGGGTacgaagaaaaatcaaaacatcttgaATAAGtgaatgtt
ttttatttcatgCATTAAATCTGATTCAATGGATCtcatttagaaaaata
tatccgaatagaaaaataaaagcttccaaattttactggttacttatttt
ccaaaatcgaaatatttagGTTTCTAATTTAGAATTTTGTAATCCTCAAC
TTGTGTATGGAGAAATACCCTTTTTTTGTCAGATTGcaacttttttgttt
cgatttatTTTCAGATCTTCCTCATCAAAGTCACAAAATTCTGGGATGTC
ATTTCAGGTAcaattttaacattttgtatTCAAAATTCAACTGATAgcaa
aaaatacttgcaatgtTTGTTTATCCTTGCAAAAGTTTGCATTCTTTATG
CCCTTGTTGCATTTATCACTCTTGCCCTTTCTGGTTCCCCGAATTACTAG
CGGTTCCCTAATGAGCGTCCCCGGTTGATTGATTTTATTAAGATTTCAAC
CCGGGACTTTATTTTCCGATTCCCCGCTTATAAAAATTCGAGATTTTTCC
ATCCCCGCTTATACCAATAGTTACCGGAGATTAGCTTTCAATGAGTAACT
GTTCCCTTCATGAAATGTTTTACTTTGTTTACCTAATTTTTGTATCAGGG
TTTTGATTCGTCGAAAGGTGGTCGATCAGATGGAGAGGGTCAGGATGAAA
ggtaaaataaatttattttcctttaaaactttggaaaattgtAGTGTGCT
ACGTTAAAATTAGAAAAGTATACCAAAAGGTACTTCTGAGTGCTGGAAAA
ACCTTTTAGAATTAGGCAGATTTTCTACCAATAATAAGCGATCAAAAAAG
TCCGTTATGCCTTCtcgtttattttttttaattttcaacgaCAAACATCC
GGTACCGGTTTCATACGGAGATATTCGTGACATTAGCCAGTGTTTCTTGT
TTCTTGTTCAGCGGCTCTTCAAAGAAGAAGAAACGTAAGAAAGAAAAGAa
gtcgaagaagaaaaaaaagaagcatCACAAACAAACATCCGATACCGATG
AAAGTTCCGACGGTGATGATCGCAAGCAGAATTCCCGACGTCGTTCCTCT
GATCGTGGCGAACATTCCCGACATAAATATGACAATTCTCGTCATAGAAA
TGATAATTCTAGCTATAGAGACGAAAGTCCTCGACGCAGAGACGATAATC
GAAGTTATAGAGACAAAAACCCTGCCCAACGTATGAGCGAAAATTCTCGG
TATAGAGACGATAATGCTCGAAGGTCACGTAACCAAAACGAAGATAAACC
TTTTCACCGTCGAGATGATAGACGTTCAGAGACAAACGATAAACGATCTC
GTCGTAAATCGAGAAGTCGTTCTCGTTCTCGCTCAAACGAGAGGACCCGT
TTTCGTAAAAACGAGGAAAAACGAGGACGCCGTAGATACGATAGTTCTTC
CTCAAATGACGGTCGCTAGTTTTTTATCAAgccattttttaatattttat
tgtttttatttatttaaaaaattatctatttttatctttttcgcTATCAG
AATAAAATAGTACAAGACGTTCAAGTTAATACCTATCCGTAGAGTCAGTA
AACAaa

Coding sequence (CDS) from alignment at scaffold_462:928669..933224+

>TCONS_00066935 ID=TCONS_00066935|Name=TCONS_00066935|organism=Clytia hemisphaerica|type=CDS|length=9423bp|location=Sequence derived from alignment at scaffold_462:928669..933224+ (Clytia hemisphaerica)
tacagaaaaataaatagaaagacaagaaaaatatacaattcaaataaaaa
acacatAATGGCTGGAATATATCATCCATCTCGCGGTGGAACGCGTGGCG
GTAAAGATCAATTCAACTGGGATGACGTCAAAGGAGATAAAGAACGTGAA
AACTATCTAGgTCATTCTATAATGGTACCTACAGGAAAATGGCAAGAAGG
AAAAGACTTGATATGGTACACACGAGATAACAATAAATCGCAGACTGAAA
AAGAATTAAAGAAAAAACAGGAATTGAAAGCTGTGAAAGACTTAGAAGCT
CGTGCTATGGCGGCCGCTTTaggtCACAAGTCATTTTCAACAGGTACAAC
ATCATTAACAGCTAAGGAATTGCAAGAAGTTTTATCACGTGGCAAAACAG
AGCACGGTGGTGGTGAACGGATACAAGGTGTCGGACATAAGAAATCTTCC
TCATCAAAGTCACAAAATTCTGGGATGTCATTTCAGGGTTTTGATTCGTC
GAAAGGTGGTCGATCAGATGGAGAGGGTCAGGATGAAAgCGGCTCTTCAA
AGAAGAAGAAACGTAAGAAAGAAAAGAagtcgaagaagaaaaaaaagaag
catCACAAACAAACATCCGATACCGATGAAAGTTCCGACGGTGATGATCG
CAAGCAGAATTCCCGACGTCGTTCCTCTGATCGTGGCGAACATTCCCGAC
ATAAATATGACAATTCTCGTCATAGAAATGATAATTCTAGCTATAGAGAC
GAAAGTCCTCGACGCAGAGACGATAATCGAAGTTATAGAGACAAAAACCC
TGCCCAACGTATGAGCGAAAATTCTCGGTATAGAGACGATAATGCTCGAA
GGTCACGTAACCAAAACGAAGATAAACCTTTTCACCGTCGAGATGATAGA
CGTTCAGAGACAAACGATAAACGATCTCGTCGTAAATCGAGAAGTCGTTC
TCGTTCTCGCTCAAACGAGAGGACCCGTTTTCGTAAAAACGAGGAAAAAC
GAGGACGCCGTAGATACGATAGTTCTTCCTCAAATGACGGTCGCTAGtac
agaaaaataaatagaaagacaagaaaaatatacaattcaaataaaaaaca
catAATGGCTGGAATATATCATCCATCTCGCGGTGGAACGCGTGGCGGTA
AAGATCAATTCAACTGGGATGACGTCAAAGGAGATAAAGAACGTGAAAAC
TATCTAGgTCATTCTATAATGGTACCTACAGGAAAATGGCAAGAAGGAAA
AGACTTGATATGGTACACACGAGATAACAATAAATCGCAGACTGAAAAAG
AATTAAAGAAAAAACAGGAATTGAAAGCTGTGAAAGACTTAGAAGCTCGT
GCTATGGCGGCCGCTTTaggtCACAAGTCATTTTCAACAGGTACAACATC
ATTAACAGCTAAGGAATTGCAAGAAGTTTTATCACGTGGCAAAACAGAGC
ACGGTGGTGGTGAACGGATACAAGGTGTCGGACATAAGAAATCTTCCTCA
TCAAAGTCACAAAATTCTGGGATGTCATTTCAGGGTTTTGATTCGTCGAA
AGGTGGTCGATCAGATGGAGAGGGTCAGGATGAAAgCGGCTCTTCAAAGA
AGAAGAAACGTAAGAAAGAAAAGAagtcgaagaagaaaaaaaagaagcat
CACAAACAAACATCCGATACCGATGAAAGTTCCGACGGTGATGATCGCAA
GCAGAATTCCCGACGTCGTTCCTCTGATCGTGGCGAACATTCCCGACATA
AATATGACAATTCTCGTCATAGAAATGATAATTCTAGCTATAGAGACGAA
AGTCCTCGACGCAGAGACGATAATCGAAGTTATAGAGACAAAAACCCTGC
CCAACGTATGAGCGAAAATTCTCGGTATAGAGACGATAATGCTCGAAGGT
CACGTAACCAAAACGAAGATAAACCTTTTCACCGTCGAGATGATAGACGT
TCAGAGACAAACGATAAACGATCTCGTCGTAAATCGAGAAGTCGTTCTCG
TTCTCGCTCAAACGAGAGGACCCGTTTTCGTAAAAACGAGGAAAAACGAG
GACGCCGTAGATACGATAGTTCTTCCTCAAATGACGGTCGCTAGtacaga
aaaataaatagaaagacaagaaaaatatacaattcaaataaaaaacacat
AATGGCTGGAATATATCATCCATCTCGCGGTGGAACGCGTGGCGGTAAAG
ATCAATTCAACTGGGATGACGTCAAAGGAGATAAAGAACGTGAAAACTAT
CTAGgTCATTCTATAATGGTACCTACAGGAAAATGGCAAGAAGGAAAAGA
CTTGATATGGTACACACGAGATAACAATAAATCGCAGACTGAAAAAGAAT
TAAAGAAAAAACAGGAATTGAAAGCTGTGAAAGACTTAGAAGCTCGTGCT
ATGGCGGCCGCTTTaggtCACAAGTCATTTTCAACAGGTACAACATCATT
AACAGCTAAGGAATTGCAAGAAGTTTTATCACGTGGCAAAACAGAGCACG
GTGGTGGTGAACGGATACAAGGTGTCGGACATAAGAAATCTTCCTCATCA
AAGTCACAAAATTCTGGGATGTCATTTCAGGGTTTTGATTCGTCGAAAGG
TGGTCGATCAGATGGAGAGGGTCAGGATGAAAgCGGCTCTTCAAAGAAGA
AGAAACGTAAGAAAGAAAAGAagtcgaagaagaaaaaaaagaagcatCAC
AAACAAACATCCGATACCGATGAAAGTTCCGACGGTGATGATCGCAAGCA
GAATTCCCGACGTCGTTCCTCTGATCGTGGCGAACATTCCCGACATAAAT
ATGACAATTCTCGTCATAGAAATGATAATTCTAGCTATAGAGACGAAAGT
CCTCGACGCAGAGACGATAATCGAAGTTATAGAGACAAAAACCCTGCCCA
ACGTATGAGCGAAAATTCTCGGTATAGAGACGATAATGCTCGAAGGTCAC
GTAACCAAAACGAAGATAAACCTTTTCACCGTCGAGATGATAGACGTTCA
GAGACAAACGATAAACGATCTCGTCGTAAATCGAGAAGTCGTTCTCGTTC
TCGCTCAAACGAGAGGACCCGTTTTCGTAAAAACGAGGAAAAACGAGGAC
GCCGTAGATACGATAGTTCTTCCTCAAATGACGGTCGCTAGtacagaaaa
ataaatagaaagacaagaaaaatatacaattcaaataaaaaacacatAAT
GGCTGGAATATATCATCCATCTCGCGGTGGAACGCGTGGCGGTAAAGATC
AATTCAACTGGGATGACGTCAAAGGAGATAAAGAACGTGAAAACTATCTA
GgTCATTCTATAATGGTACCTACAGGAAAATGGCAAGAAGGAAAAGACTT
GATATGGTACACACGAGATAACAATAAATCGCAGACTGAAAAAGAATTAA
AGAAAAAACAGGAATTGAAAGCTGTGAAAGACTTAGAAGCTCGTGCTATG
GCGGCCGCTTTaggtCACAAGTCATTTTCAACAGGTACAACATCATTAAC
AGCTAAGGAATTGCAAGAAGTTTTATCACGTGGCAAAACAGAGCACGGTG
GTGGTGAACGGATACAAGGTGTCGGACATAAGAAATCTTCCTCATCAAAG
TCACAAAATTCTGGGATGTCATTTCAGGGTTTTGATTCGTCGAAAGGTGG
TCGATCAGATGGAGAGGGTCAGGATGAAAgCGGCTCTTCAAAGAAGAAGA
AACGTAAGAAAGAAAAGAagtcgaagaagaaaaaaaagaagcatCACAAA
CAAACATCCGATACCGATGAAAGTTCCGACGGTGATGATCGCAAGCAGAA
TTCCCGACGTCGTTCCTCTGATCGTGGCGAACATTCCCGACATAAATATG
ACAATTCTCGTCATAGAAATGATAATTCTAGCTATAGAGACGAAAGTCCT
CGACGCAGAGACGATAATCGAAGTTATAGAGACAAAAACCCTGCCCAACG
TATGAGCGAAAATTCTCGGTATAGAGACGATAATGCTCGAAGGTCACGTA
ACCAAAACGAAGATAAACCTTTTCACCGTCGAGATGATAGACGTTCAGAG
ACAAACGATAAACGATCTCGTCGTAAATCGAGAAGTCGTTCTCGTTCTCG
CTCAAACGAGAGGACCCGTTTTCGTAAAAACGAGGAAAAACGAGGACGCC
GTAGATACGATAGTTCTTCCTCAAATGACGGTCGCTAGtacagaaaaata
aatagaaagacaagaaaaatatacaattcaaataaaaaacacatAATGGC
TGGAATATATCATCCATCTCGCGGTGGAACGCGTGGCGGTAAAGATCAAT
TCAACTGGGATGACGTCAAAGGAGATAAAGAACGTGAAAACTATCTAGgT
CATTCTATAATGGTACCTACAGGAAAATGGCAAGAAGGAAAAGACTTGAT
ATGGTACACACGAGATAACAATAAATCGCAGACTGAAAAAGAATTAAAGA
AAAAACAGGAATTGAAAGCTGTGAAAGACTTAGAAGCTCGTGCTATGGCG
GCCGCTTTaggtCACAAGTCATTTTCAACAGGTACAACATCATTAACAGC
TAAGGAATTGCAAGAAGTTTTATCACGTGGCAAAACAGAGCACGGTGGTG
GTGAACGGATACAAGGTGTCGGACATAAGAAATCTTCCTCATCAAAGTCA
CAAAATTCTGGGATGTCATTTCAGGGTTTTGATTCGTCGAAAGGTGGTCG
ATCAGATGGAGAGGGTCAGGATGAAAgCGGCTCTTCAAAGAAGAAGAAAC
GTAAGAAAGAAAAGAagtcgaagaagaaaaaaaagaagcatCACAAACAA
ACATCCGATACCGATGAAAGTTCCGACGGTGATGATCGCAAGCAGAATTC
CCGACGTCGTTCCTCTGATCGTGGCGAACATTCCCGACATAAATATGACA
ATTCTCGTCATAGAAATGATAATTCTAGCTATAGAGACGAAAGTCCTCGA
CGCAGAGACGATAATCGAAGTTATAGAGACAAAAACCCTGCCCAACGTAT
GAGCGAAAATTCTCGGTATAGAGACGATAATGCTCGAAGGTCACGTAACC
AAAACGAAGATAAACCTTTTCACCGTCGAGATGATAGACGTTCAGAGACA
AACGATAAACGATCTCGTCGTAAATCGAGAAGTCGTTCTCGTTCTCGCTC
AAACGAGAGGACCCGTTTTCGTAAAAACGAGGAAAAACGAGGACGCCGTA
GATACGATAGTTCTTCCTCAAATGACGGTCGCTAGtacagaaaaataaat
agaaagacaagaaaaatatacaattcaaataaaaaacacatAATGGCTGG
AATATATCATCCATCTCGCGGTGGAACGCGTGGCGGTAAAGATCAATTCA
ACTGGGATGACGTCAAAGGAGATAAAGAACGTGAAAACTATCTAGgTCAT
TCTATAATGGTACCTACAGGAAAATGGCAAGAAGGAAAAGACTTGATATG
GTACACACGAGATAACAATAAATCGCAGACTGAAAAAGAATTAAAGAAAA
AACAGGAATTGAAAGCTGTGAAAGACTTAGAAGCTCGTGCTATGGCGGCC
GCTTTaggtCACAAGTCATTTTCAACAGGTACAACATCATTAACAGCTAA
GGAATTGCAAGAAGTTTTATCACGTGGCAAAACAGAGCACGGTGGTGGTG
AACGGATACAAGGTGTCGGACATAAGAAATCTTCCTCATCAAAGTCACAA
AATTCTGGGATGTCATTTCAGGGTTTTGATTCGTCGAAAGGTGGTCGATC
AGATGGAGAGGGTCAGGATGAAAgCGGCTCTTCAAAGAAGAAGAAACGTA
AGAAAGAAAAGAagtcgaagaagaaaaaaaagaagcatCACAAACAAACA
TCCGATACCGATGAAAGTTCCGACGGTGATGATCGCAAGCAGAATTCCCG
ACGTCGTTCCTCTGATCGTGGCGAACATTCCCGACATAAATATGACAATT
CTCGTCATAGAAATGATAATTCTAGCTATAGAGACGAAAGTCCTCGACGC
AGAGACGATAATCGAAGTTATAGAGACAAAAACCCTGCCCAACGTATGAG
CGAAAATTCTCGGTATAGAGACGATAATGCTCGAAGGTCACGTAACCAAA
ACGAAGATAAACCTTTTCACCGTCGAGATGATAGACGTTCAGAGACAAAC
GATAAACGATCTCGTCGTAAATCGAGAAGTCGTTCTCGTTCTCGCTCAAA
CGAGAGGACCCGTTTTCGTAAAAACGAGGAAAAACGAGGACGCCGTAGAT
ACGATAGTTCTTCCTCAAATGACGGTCGCTAGtacagaaaaataaataga
aagacaagaaaaatatacaattcaaataaaaaacacatAATGGCTGGAAT
ATATCATCCATCTCGCGGTGGAACGCGTGGCGGTAAAGATCAATTCAACT
GGGATGACGTCAAAGGAGATAAAGAACGTGAAAACTATCTAGgTCATTCT
ATAATGGTACCTACAGGAAAATGGCAAGAAGGAAAAGACTTGATATGGTA
CACACGAGATAACAATAAATCGCAGACTGAAAAAGAATTAAAGAAAAAAC
AGGAATTGAAAGCTGTGAAAGACTTAGAAGCTCGTGCTATGGCGGCCGCT
TTaggtCACAAGTCATTTTCAACAGGTACAACATCATTAACAGCTAAGGA
ATTGCAAGAAGTTTTATCACGTGGCAAAACAGAGCACGGTGGTGGTGAAC
GGATACAAGGTGTCGGACATAAGAAATCTTCCTCATCAAAGTCACAAAAT
TCTGGGATGTCATTTCAGGGTTTTGATTCGTCGAAAGGTGGTCGATCAGA
TGGAGAGGGTCAGGATGAAAgCGGCTCTTCAAAGAAGAAGAAACGTAAGA
AAGAAAAGAagtcgaagaagaaaaaaaagaagcatCACAAACAAACATCC
GATACCGATGAAAGTTCCGACGGTGATGATCGCAAGCAGAATTCCCGACG
TCGTTCCTCTGATCGTGGCGAACATTCCCGACATAAATATGACAATTCTC
GTCATAGAAATGATAATTCTAGCTATAGAGACGAAAGTCCTCGACGCAGA
GACGATAATCGAAGTTATAGAGACAAAAACCCTGCCCAACGTATGAGCGA
AAATTCTCGGTATAGAGACGATAATGCTCGAAGGTCACGTAACCAAAACG
AAGATAAACCTTTTCACCGTCGAGATGATAGACGTTCAGAGACAAACGAT
AAACGATCTCGTCGTAAATCGAGAAGTCGTTCTCGTTCTCGCTCAAACGA
GAGGACCCGTTTTCGTAAAAACGAGGAAAAACGAGGACGCCGTAGATACG
ATAGTTCTTCCTCAAATGACGGTCGCTAGtacagaaaaataaatagaaag
acaagaaaaatatacaattcaaataaaaaacacatAATGGCTGGAATATA
TCATCCATCTCGCGGTGGAACGCGTGGCGGTAAAGATCAATTCAACTGGG
ATGACGTCAAAGGAGATAAAGAACGTGAAAACTATCTAGgTCATTCTATA
ATGGTACCTACAGGAAAATGGCAAGAAGGAAAAGACTTGATATGGTACAC
ACGAGATAACAATAAATCGCAGACTGAAAAAGAATTAAAGAAAAAACAGG
AATTGAAAGCTGTGAAAGACTTAGAAGCTCGTGCTATGGCGGCCGCTTTa
ggtCACAAGTCATTTTCAACAGGTACAACATCATTAACAGCTAAGGAATT
GCAAGAAGTTTTATCACGTGGCAAAACAGAGCACGGTGGTGGTGAACGGA
TACAAGGTGTCGGACATAAGAAATCTTCCTCATCAAAGTCACAAAATTCT
GGGATGTCATTTCAGGGTTTTGATTCGTCGAAAGGTGGTCGATCAGATGG
AGAGGGTCAGGATGAAAgCGGCTCTTCAAAGAAGAAGAAACGTAAGAAAG
AAAAGAagtcgaagaagaaaaaaaagaagcatCACAAACAAACATCCGAT
ACCGATGAAAGTTCCGACGGTGATGATCGCAAGCAGAATTCCCGACGTCG
TTCCTCTGATCGTGGCGAACATTCCCGACATAAATATGACAATTCTCGTC
ATAGAAATGATAATTCTAGCTATAGAGACGAAAGTCCTCGACGCAGAGAC
GATAATCGAAGTTATAGAGACAAAAACCCTGCCCAACGTATGAGCGAAAA
TTCTCGGTATAGAGACGATAATGCTCGAAGGTCACGTAACCAAAACGAAG
ATAAACCTTTTCACCGTCGAGATGATAGACGTTCAGAGACAAACGATAAA
CGATCTCGTCGTAAATCGAGAAGTCGTTCTCGTTCTCGCTCAAACGAGAG
GACCCGTTTTCGTAAAAACGAGGAAAAACGAGGACGCCGTAGATACGATA
GTTCTTCCTCAAATGACGGTCGCTAGtacagaaaaataaatagaaagaca
agaaaaatatacaattcaaataaaaaacacatAATGGCTGGAATATATCA
TCCATCTCGCGGTGGAACGCGTGGCGGTAAAGATCAATTCAACTGGGATG
ACGTCAAAGGAGATAAAGAACGTGAAAACTATCTAGgTCATTCTATAATG
GTACCTACAGGAAAATGGCAAGAAGGAAAAGACTTGATATGGTACACACG
AGATAACAATAAATCGCAGACTGAAAAAGAATTAAAGAAAAAACAGGAAT
TGAAAGCTGTGAAAGACTTAGAAGCTCGTGCTATGGCGGCCGCTTTaggt
CACAAGTCATTTTCAACAGGTACAACATCATTAACAGCTAAGGAATTGCA
AGAAGTTTTATCACGTGGCAAAACAGAGCACGGTGGTGGTGAACGGATAC
AAGGTGTCGGACATAAGAAATCTTCCTCATCAAAGTCACAAAATTCTGGG
ATGTCATTTCAGGGTTTTGATTCGTCGAAAGGTGGTCGATCAGATGGAGA
GGGTCAGGATGAAAgCGGCTCTTCAAAGAAGAAGAAACGTAAGAAAGAAA
AGAagtcgaagaagaaaaaaaagaagcatCACAAACAAACATCCGATACC
GATGAAAGTTCCGACGGTGATGATCGCAAGCAGAATTCCCGACGTCGTTC
CTCTGATCGTGGCGAACATTCCCGACATAAATATGACAATTCTCGTCATA
GAAATGATAATTCTAGCTATAGAGACGAAAGTCCTCGACGCAGAGACGAT
AATCGAAGTTATAGAGACAAAAACCCTGCCCAACGTATGAGCGAAAATTC
TCGGTATAGAGACGATAATGCTCGAAGGTCACGTAACCAAAACGAAGATA
AACCTTTTCACCGTCGAGATGATAGACGTTCAGAGACAAACGATAAACGA
TCTCGTCGTAAATCGAGAAGTCGTTCTCGTTCTCGCTCAAACGAGAGGAC
CCGTTTTCGTAAAAACGAGGAAAAACGAGGACGCCGTAGATACGATAGTT
CTTCCTCAAATGACGGTCGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041834XLOC_041834Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066935-exon-scaffold_462-1491911889:928669..928829TCONS_00066935-exon-scaffold_462-1491911889:928669..928829Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:928669..928829TCONS_00066935-exon-scaffold_462-1510915933:928669..928829Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:928669..928829TCONS_00066935-exon-scaffold_462-1575043694:928669..928829Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1491911889:929191..929245TCONS_00066935-exon-scaffold_462-1491911889:929191..929245Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:929191..929245TCONS_00066935-exon-scaffold_462-1510915933:929191..929245Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:929191..929245TCONS_00066935-exon-scaffold_462-1575043694:929191..929245Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1491911889:929637..929691TCONS_00066935-exon-scaffold_462-1491911889:929637..929691Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:929637..929691TCONS_00066935-exon-scaffold_462-1510915933:929637..929691Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:929637..929691TCONS_00066935-exon-scaffold_462-1575043694:929637..929691Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1491911889:929819..929868TCONS_00066935-exon-scaffold_462-1491911889:929819..929868Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:929819..929868TCONS_00066935-exon-scaffold_462-1510915933:929819..929868Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:929819..929868TCONS_00066935-exon-scaffold_462-1575043694:929819..929868Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1491911889:930060..930105TCONS_00066935-exon-scaffold_462-1491911889:930060..930105Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:930060..930105TCONS_00066935-exon-scaffold_462-1510915933:930060..930105Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:930060..930105TCONS_00066935-exon-scaffold_462-1575043694:930060..930105Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1491911889:930364..930440TCONS_00066935-exon-scaffold_462-1491911889:930364..930440Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:930364..930440TCONS_00066935-exon-scaffold_462-1510915933:930364..930440Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:930364..930440TCONS_00066935-exon-scaffold_462-1575043694:930364..930440Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1491911889:931883..931925TCONS_00066935-exon-scaffold_462-1491911889:931883..931925Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:931883..931925TCONS_00066935-exon-scaffold_462-1510915933:931883..931925Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:931883..931925TCONS_00066935-exon-scaffold_462-1575043694:931883..931925Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1491911889:932267..932319TCONS_00066935-exon-scaffold_462-1491911889:932267..932319Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:932267..932319TCONS_00066935-exon-scaffold_462-1510915933:932267..932319Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:932267..932319TCONS_00066935-exon-scaffold_462-1575043694:932267..932319Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1491911889:932580..933224TCONS_00066935-exon-scaffold_462-1491911889:932580..933224Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1510915933:932580..933224TCONS_00066935-exon-scaffold_462-1510915933:932580..933224Clytia hemisphaericaexon
TCONS_00066935-exon-scaffold_462-1575043694:932580..933224TCONS_00066935-exon-scaffold_462-1575043694:932580..933224Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066935-proteinTCONS_00066935-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:928669..933224 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.0838	18.2553	8.64307	7.20765	21.3238	17.7025	18.5533	21.5696	21.3808	16.391	19.0767	16.5105	11.169	13.5323	15.6457	15.1068	21.5302	19.047	9.50569	8.93614	15.4288	12.5999	54.4319	44.7122	18.5381	20.9335	8.5232	8.77702	26.4669	34.118
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019315Kinase_phosphorylation_domain
Blast
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BLAST of TCONS_00066935 vs. Swiss-Prot (Human)
Match: MMTA2 (Multiple myeloma tumor-associated protein 2 OS=Homo sapiens GN=MMTAG2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.352e-20
Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 2 
Query:  104 KDQFNWDDVKGDKERENYLGHSIMVPTGKWQEGKDLIWYTRDNNKSQTXXXXXXXXXXXXXXXXEARAMAAALGHKSFSTGTTSLTAKELQEVLSR--GKTEHGGGERIQGVG 436
            +DQFNW+DVK DK+RENYLG+S+M P G+WQ+G+DL WY +            +++EL AV++ E  A+ AALG+K+     T L+ ++  EV  R  G  E  G +R+ G+G
Sbjct:   13 QDQFNWEDVKTDKQRENYLGNSLMAPVGRWQKGRDLTWYAKGRAPC---AGPSREEELAAVREAEREALLAALGYKNVKKQPTGLSKEDFAEVCKREGGDPEEKGVDRLLGLG 122
The following BLAST results are available for this feature:
BLAST of TCONS_00066935 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMTA21.352e-2043.36Multiple myeloma tumor-associated protein 2 OS=Hom... [more]
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