TCONS_00066900 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066900
Unique Name	TCONS_00066900
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2170

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_462:768212..778905+

transcript sequence

>TCONS_00066900 ID=TCONS_00066900|Name=TCONS_00066900|organism=Clytia hemisphaerica|type=transcript|length=2170bp
tttagataaaaaaaataaacttaacaAAGTAATGGGTAATCAAATTCATG
TGTGTATTATGAATAATATAATACCAATAAATAGTCAAATAGCTAATCTT
GCAAGAGACATATTGGATGCTGATGACTTCGCCAAGCCCTCACTGTTATT
GAAATTAAAAGAAATCACCTCAAGTCAATCACAAGATCAGGAAATAACTT
TAATAGAGATCTGGAGATGTAGACTCCCAAATGCAGTCATTCAAGcttta
cggcttgattttacaaaagtttctGGTATGTGGCTTACTGCTTGCCAGCT
GATCAATACTGCTGTAGAATGTTGTTTCTTCAACCCAAGATATCTccaag
aaataaagaaagaatATATTCCAGCTCTCATACAAGAATCCTTGAATATC
TGTCGAAGCATTGTCAAAGAATATCAAACATCGAGTGACATGTTCAAGAT
CAATTTGTGTGCTAATCTCTCATGGATTATCACTTCCATCAATACTTTGA
TGAAGAGCTTCGTGTTTGTCAGTGTTCTTGtcgTAGCTTCCAAACATTTC
CTTCAATTCTTAATGTCAGAGGATGATAGAATCTCATTGCTGTCACTTTC
TCTCCTCAAAAACATCATTGAAACAAACAGtgATGTATTTTATCATGCGG
CTGAAAGTCGAATGCACAATGTTGCAGATGAACTGGCTTACAAAATCTCA
AGTACCAAGGATAAAAAAGTAGCAAGAATGACCGTTTCAATTCTATTGAA
CTTGTTGAGATTATACAGCTCCTTACTGGACCTTTTTGTCACTAAAAGAT
ACAGAggttttaaaatgtatttgaaCAAGTGGAAAGGAAACGGTTTCGAC
GAAAACATCGAATACATCATGGGTATGTTAGAAGAAAAAGCTGAGAAAAT
GAAATCCTCTcaaAGACATCATAATGCTGCCATAGTCATCCAGTCCTTCT
ATCGTGGCTGTAAAACAAGGAATAAATTGAAAACTGCTACACTTGCAATG
TCGAAATTTCAGCAAAGTTATCGCAAGAAGATCGAAACAAAACAGACGTT
AGATGAAAAGAAACGATTGGATAAAGTCAAGAAAGACCACGATGAGAGAC
AACGTCGTAAAGGTTTCGTCAAATCCAAAACAAAACAGCTACAGTCAATT
GAAGGAATCCCAGCCAAAACAGTGGATACATTTCTTGACaatctacaaca
agaatctgcACGTAAAATCCAAGCTTCTTGGAGCGGTTGGAAAACGAGAA
AGGTTATGAGGGAAATTGCACCTCATTTAGTGAAAGAAAAGGCTGCAATA
TTACTACAGCGCCAGATTCGGAGATGGTTGGAGAAGGTGCGAAAAGTAAA
ACAAGATGCTCGATTGGATATGATTCCTGATGGGTTGAACGATGAAAGAA
gaatcgaactttcgaatgtTCTGGTCAATATTCGAGAAAAATTCCCTAAA
GTTGATGTCAGCGACGAAGAACTTATACAAGGCCATCTTaaaGCCAATCA
AATGCTCAATAACCACGTGATAGGGTTACGATCAATGAGAAGACGAGATG
ACCATCGACGCGCTCTGATTGGTCAATTAACCATCCAATCAGAAACGTTA
TCGCGAATGCCAAATTTGAGCTCAGCCAATGAAATGACGTTAGAGCAGCT
GGCGTCACGTTCGACGCCCGTCATGGTAGCGGCTCGTAAACAACACGTGG
AATTTATAAACGATTTGAAAAGGCCCTGGTGGGATAGGCTATCTGATGAA
TCGGCCGTTGAAGACCCTAACAGGCCCACGGTGCTTGGGAGTCATGTAAT
AGACTATGAAAAGAATTTCTAAGATAATGTTTTCAATTTGAGTGAGACTG
GCTTGTCGGTGAAGTTTGAGTGGAGCTATTTAAAGGTAAGATTGTTTTCT
CGTGTTTTGTATTTGCTTCAAATGTGGATAGGATTGAAAAGAGCTCGAAC
GAACTGTTGGTGGGATgagatttttggcaaaaataccTGACAGTTTTTTG
AGGGATTCTGAAATTATGGTCCTTCCAATATATATCATCCGGGTGGAGTT
TTATACTAGCACCTTTATTCATcgttttgaaaagtgaaaaggaAAAGGCT
TTACTTTAAAAGTCGTTAACGGTTATTCGAATTAAAATAGACGGGCCATA
CTTTTAAGCCATCAAAAAAA

Run BLAST on NCBI

transcript from alignment at scaffold_462:768212..778905+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066900 ID=TCONS_00066900|Name=TCONS_00066900|organism=Clytia hemisphaerica|type=transcript|length=10694bp|location=Sequence derived from alignment at scaffold_462:768212..778905+ (Clytia hemisphaerica)
tttagataaaaaaaataaacttaacaAAGTAATGGGTAATCAAATTCATG
TGTGTATTATGAATAATATAATACCAATAAATAGTCAAATAGCTAATCTT
GCAAGAGACATATTGGATGCTGATGACTTCGCCAAGCCCTCACTGTTATT
GAAATTAAAAGGTTTGTCTAAAGCTGTTCTTAAGAACCAGAATTATGTTG
GTTGATTTTGCTAGATTTTCAAGGAAACTCAAGCAAAGCTATGCCACAAC
AATATCTTCACTTGAGTTCAAATGGTTATGACTCATTTCTGTTGTTAAGA
GTGTGAAGGTGCAATTATACTTTCTTGTTTTCCTATTTCTAGAAATCACC
TCAAGTCAATCACAAGATCAGGAAATAACTTTAATAGAGATCTGGAGATG
TAGACTCCCAAATGCAGTCATTCAAGGTAAACGTAGTGCTATGGTTGTTC
TGTCTGAAATTtatcttctctttatgtctacTGTTGTTGTTATCTTTTTT
CATCAATTCCTACTAGTAACATAAGGGACATACTTGCAATGTTTAGAAAC
GAGTTGGCTGTACATCTATCCAAACATTGCTTAAAAAAGGGTGCAAGTTC
TCCAGGACTGACTGACATCCAAAtatactttaaccggattaaatttcacg
agattaaatttcgcgagattaaattttgcgagattaaatttcgcgagctg
AAATAATCGCGAAATTGTCTGGATTTAAAttcgcgagtcagagttttgaa
atatttcgcgtggatttaatttcgcgaataagccagaaaacaactgaaaa
tagccattttttgccataaatggagacttggaactagtttctccgccaaa
aatacaattgtaaaagttttgtggtggatttaatttcgcgaatcaggaat
ctcacgcgtgttcgcgagttttaattttgcgaaaatgggaaaaattcgcg
aaatcgggaaatttaatctcgcgaaaattaatccgattaaagtatctGAT
TTTATTTCATCGGGCATTTCCAATGAGAGAGAGAAATAGTTTATAAATTA
AACTCGAAACCAAATCTTTTTGAATTTGTAACACATCTAAAAGAGgtcaa
tgttaatttttttttagctttacggcttgattttacaaaagtttctGGTA
TGTGGCTTACTGCTTGCCAGCTGATCAATACTGCTGTAGAATGTTGTTTC
TTCAACCCAAGATATCTccaagaaataaagaaagaatATATTCCAGCTCT
CATACAAGAATCCTTGAATATCTGTCGAAGCATTGTCAAAGAATATCAAA
CATCGAGTGACGTAAGCTGTTTCCCTCTTTCTGTCTCCCAGAATCAGAGc
taaaaactttgcattttaatAAATATATGCAAATGTTTCAGACTATCCTA
TTTGATCAAGAAAGAGGTGTGCTGCGAAACATATTTCATGATTATATACT
GTTTTCTTTATATTCAGATGTTCAAGATCAATTTGTGTGCTAATCTCTCA
TGGATTATCACTTCCATCAATACTTTGATGAAGAGCTTCGTGTTTGTCAG
TGTTCTTGGTATGCTAAGTTTGTTTTCTAAACATTAAATGATtctttgtt
tcaattttcaaaacttcaatggagcaattttcctttaaaattctAGTATC
TTgtaaattcaaaaggttgttaTTTATGGCTCTTGTCTTCTAGACAACGC
CAATCTTATTTAAAAATGCCAAagaattaattttaaaattactATATTTT
GTTTTAATCCCTTTCTTGTCCTATTTTGAATATGGTAAATATTTTGTCAT
GTATATCCTGCACCATGTAGGTCGAAAtactgaatattttttaaaacaag
aaGTTCAATAACAGTATGATTCAAATTGAAAACTCTAATTTGGTTACATT
TGAGACGAATGGTTTCATTATGTTCttctgttttttttgtaattaaataa
attctgtttttatttttagtcgTAGCTTCCAAACATTTCCTTCAATTCTT
AATGTCAGAGGATGATAGAATCTCATTGCTGTCACTTTCTCTCCTCAAAA
ACATCATTGAAACAAACAGGTACCAAACGGCATCATTATAATGTATTggt
ttggtttttatttttttgacagGCCCATGACAAGTATATTTGACATTGAT
ATTTGAATCAATTGAGCAGCCGCACAAAAAGAACTGGGAAAAATTTCTAA
TTCATGTCCAGTATCTTTGACATTAGGCCTGACGGCTAACAACTGGCGAG
GACAAATATACATGCCATCGGCTGctttaaaatacttttttcacctactt
aaggtagtcctttaaattaactcttgtccgttcgttcgttcgttcgttcg
tctgttcgttcgtctgttgccagcttttctcaggattggctcattagttt
tttctgatttttggcacaatgatgcaaaatggcaatgcccaaaatgtgNN
NNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCATCAAatatcaatgataa
aatttaatgcattttcgctaactgctatattttctaaatgattgtttttc
tccttattgctatctaagtttcatcatcaggtaggtccattcagcatatN
atgccggaaaaactgggtttttggcattttctcgagattttatcattagt
tttttctgattttttgctcaaagatgcgtattaacaatgtacaaaacatg
gccgagtccgatttttgagaaaaaattttttccggcttaaaatgccggaa
atatgccggaaatcgctgtttttgcagattttcNATTTTCGCCCGACTGC
ATCggcttgaaaatttttgtcaattttttttgccattttttcaatttttt
ccctGTGGGCAGGGTTAAAGCCCTGAAATGAATGATAAATCACTCCTGAT
GATTATTATACTGGTCGGTCATTTTGAATGCTGATTTGCTTCTTTCCTTT
TcacatttatttttcatttatagtgATGTATTTTATCATGCGGCTGAAAG
TCGAATGCACAATGTTGCAGATGAACTGGCTTACAAAATCTCAAGTACCA
AGGATAAAAAAGTAGCAAGGTATATTGGAGACTCTACTTTTTAATCTTTA
TGATTAATATGATATTTTATATATGTTGAataatattctttttattttca
acatcaGCTTTCCAGAAGAGAAAAGCTTAGAAAAGCACAGGCTTAGAAAA
ACGATTTcaagagtttttaaaaattcgaGTGATGACAATGCAATACTTTT
TGTGCGGGGAGTTTATGAGATTTTATAAGTAGGGGTGTTTATTCATGCGA
CAGGGGGAGGACATTTTAAAAGAAGGGGcctttaaataatttcaaactta
gtCCATTGGATAAAGTGNATTTCTACCAGAAGTTATATAATTATATCAAA
AGTTCTAGCCTTTTTTGTCCGCTGCAGATAATTGTGAAACACACTTTATT
AACATACATCTAATTCTTTCTCTATATGATTCTTTTCTGAAAGTTCTCTG
AAAATGAACTTTCTTTCAAGGAAAGTCGTTCATTAAAAGGGGACGTTCAT
TCGAATAAATAGGTGTACAATTGtcattgaaattcttttaaatcGTGTTC
TAATAGATTAAaccattttctttctttcatctTCTTTCTTCAGAATGACC
GTTTCAATTCTATTGAACTTGTTGAGATTATACAGCTCCTTACTGGACCT
TTTTGTCACTAAAAGATACAGGTAAAACTAACTTAGTATTCCTCTTAAAt
tccattttttttcgaaattattGCAAGTCAGTTGGAAAATTTCTACCGAG
CTTCTACTTTCTTTAAAACAGGTCTGAGGAGAAGGTCATCCTGCCTTAAA
AATATAAGTGTTTGGATGCTTAAAATACAGTTGATTGAGGCCGACAAATC
TTGAAACACTAAACTACTGACATGGCCAATTTATGtctgttttaaaaaaa
actgcCTTGAAATACACtgaaaaacaaaagtgatgtaacACTTTTCAAAG
AccattgaaaaacttttcatgaTGGGGGGATTGTATTTTAGTTCTACAGT
TTGAGAATTCTTTActtgttgaaaatttgattaTCTACTGGTAGTTTTTG
GGCTGGGAATGGGATGCCTGACAAAGGggtttgaaaagatttttgaagaa
cTAAACTATTATTATAGCCAGggattttaaatgaaaaacttttggaTTTT
AGTTTCCAAGGGATCAAATTAGATTATGATGCTATTAAAGATCTGAGCGT
AGAAAATGGTATGTTTTAATGCAATTTTGATAGAACTTTCTGTATATTTT
AGAggttttaaaatgtatttgaaCAAGTGGAAAGGAAACGGTTTCGACGA
AAACATCGAATACATCATGGGTATGTTAGAAGAAAAAGCTGAGAAAATGA
AATCCTCTcaagtaagttttttttaaacaaatgcAATTTTTTATTGACAT
GGCCTCTGAAGTGAGATTCCTATATTGACAAATTTCTCTTCAGGCTACGT
CCAGGCTAATGAGTTCCATGACAAATATTAGGCTAAGGTTGCTATAAATt
atgaaagaaaatgtttgagttTGACAAAGAGTTATTTATGTAACTGGAAT
TTTTCGAATGGTTCTTTACATTCATTTTTCTAAACTCTTCACTTATAGGG
ACATCATCATACTATCATAGTCTTTCAAGCTCTCTACACATAAAGTGTCT
ATAGCAACAAAAAAGCTCTTTTAATTTTCTCTATCTCTATTTTAAACCGA
ATTCACAAATTTTGTTCATTTATAGAGACATCATAATGCTGCCATAGTCA
TCCAGTCCTTCTATCGTGGCTGTAAAACAAGGAATAAATTGAAAACTGCT
ACACTTGCAATGTCGAAATTTCAGCAAAGTTATCGCAAGAAGATCGAAAC
AAAACAGACGTTAGATGAAAAGAAACGATTGGATAAAGTCAAGAAAGACC
ACGATGAGAGACAACGTCGTAAAGGTTTCGTCAAATCCAAAACAAAACAG
CTACAGGTCAGTAACAAGGGTGAAAATCAAAGCGctagaaattaaagaaa
tttaacTCATTGATTCTCTTTTAGTCAAAGACTTACATAAAAGAGAAGGA
AAATTTAGGGGCCTGTTAACATCAACAAACGAAATCTTTGTATATAAATG
ACGACCATTACGGCCATTATTTGTGAATGTGCTTCTATGCCAGCATTCAA
ATAgtgagcacctcactaaaaaccgggatttttcatcccgtTTCTTAGCG
AGTTctactttgacgattttttaaaaatagaagcctttcaagtgttctaa
cgcaaattcgatttttccctgtcaaaaaatcgaatgtttggagcccgaaa
acctgggctcaaaacattcgaaaattcgCAAAATCTAGCATAGGCTAGCA
TTACGGTGCATGATGAGTCCTGAATCTGCGAACCCAGTTCAAAACAAGTG
TGACATGAGGTACTATAgtgattattattattatcattttgtCTACTCCC
AGTCAATTGAAGGAATCCCAGCCAAAACAGTGGATACATTTCTTGACaat
ctacaacaagaatctgcACGTAAAATCCAAGCTTCTTGGAGCGGTTGGAA
AACGAGAAAGGTTATGAGGGAAATTGCACCTCATTTAGTGAAAGAAAAGG
CTGCAATATTACTACAGCGCCAGGTAATGATTGCTTTCTTTGTACACCAG
TTGACGAGGGACAGTTTTGttttatataccgggtgcgccacaaaaaagtt
tctctctttaaaactaattttctcgaaatctaaaagttttaaaagaaccg
TTTTTATTTccttggaaagaagaaagataaacttaaatttcgaTGGGTCA
Attattgaattcgattcattagatcaaaagttatgctcaattgaataaaa
atgttactgtcggaaaatgctcaaaaacgttaaaaatcgacctatcaaat
taaacagaagcataattacatgatatgtcagtattttcgtttcagtcatt
aaaaatgataattagctgtctaaatgaccttttgttatttaaaggaaggt
tgaatttcaacgAAAGGaggaaaattcgtcgaaaaaggccaaataatctg
ttaaaattcataaaaatacatcaaatatgggttttgaggtatagatccag
ccttacatagactttatccagtctagaaccaaaaatttgaggaaaatttc
ggtaaaactaaattaaattgatttcgatgaagattttaaaccctttcgac
ccttcagtttcaaaatttatgtgttttgttactgaaaaatgctcttaatc
atgtaaaggctaatGCAATTGNaaaatttatgtgttttgttactgaaaaa
tgctcttaatcatgtaaaggctattgcaatagccaaatttaaagtaaaaa
tttgatatgtcgatttttaacgttttcgagcactttctgaaagtaacttt
tttattcaattgagcataacttttgatctaatgaatcaaatttaataaat
gacccatcaaaatttaagtccgtctttcttctttccaatgaaataggagt
gattcttttaaaatttttagatttcgagaaaattagtttcaaagagagaa
acttttttgtggcgcacccggtagtctCCTACATATTGAGATATTATCCA
AATTTCTAATAGTTCAATGCTACTCTGTCAGATGTGAATCAAGGACAATA
TTACCATAAgagcagtagcgtggtggcagcgGAGGTTTTcaaaggggcgc
cgaaatacAAAGGGTATAAAAAGACGCTTCTCattactaatttcggcgcc
cctttgctcttttacaccttagatatggttttcggccaaaaagagaGAGA
ATACTCAAAAGTTttcgtgctcgcttcgctcgctttatttaaaaaaaaat
ttacatttcatagggggcgccaaaatctaaatcttctaaaattgcctccc
cagtttgcccgaattttagtcgacccaccacgctactgataAGAGTAGAG
CATTCGACTACGATATACAAGGTCTTATGTTCAACCCCAATCCGGATACC
ATAGACTCGATAAAAGGTATTTTATGCTTGCTTCAATGCTTACTGCTCAG
CAACTAAAAAAGGTGTCAAGGAACGAGGGATAAGTTGgaaaatccaggga
aaggagtggcgtcTTCTTATACCTTTTGACAGTTAGGGTGAGGTGTTTTC
GGGTCGCTCTTGACTATGCTcacaaacttacttacttaaattTTCCAGAT
TCGGAGATGGTTGGAGAAGGTGCGAAAAGTAAAACAAGATGCTCGATTGG
ATATGATTCCTGATGGGTTGAACGATGAAAGAAgaatcgaactttcgaat
gtTCTGGTCAATATTCGAGAAAAATTCCCTGTATGTATAACTATCATTTA
TCGATTTAAGTTAACGCTGTTAATAATTTTAATTCGACCTTTTATAGAAA
GTAGCCTCCTATTGGCCACCCCTaggatgtaatttttttttttggcttgg
GGATGACAACTTTCAGAATTTGGACAAATCTTGTGATGGTTCTGATGGTA
GGAAACTGGTAGGATGTTAGAAACTTCAGGTGGTGGTTTAAGATGAGGTC
AATCAAAGCACCGTTTGAATTATCTAGATTCCTTTCAAGAAATCTGACTG
AACCTATAAcagggggggtcttgcagttactccttgacactatgtggagt
aactgcaattttggacattttctacagacaccaccacccttgcagttatt
ccatagtgtactaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa
ctaactgattttaccctcaaaattggtgtataccacccccaaaaatgcca
aatttggcaattttttcactgaattcctcatttttgataccattttactg
tgtacgtcttattaacgacttttcaagagttaaatatctcaatcattttc
caagtttgttaaaatatctttcatgccttgatcgaagaaaaaattttgtg
atttttttttgacttttgaaaaaaatgttttgaatttttttgcttccgga
atttttaaaaacctaaagttttaagtgaaaaattgaaaaatgtgctcact
tagtacaccatatgctaccaaaatcgacaattttgggcttaggcaccacc
catgttgcagttagtccactggtggagtaactgttttcccaaattttggt
ttatataccaccacggtaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGCTTGGGGATGACAACTTTCAGAATTTGGATAAATCTTGTGATG
GTTCTGATGGTAGGAAACTGGTAGGATGTTAGAAACTTCAGGTGGTGGTT
TAAGATGAGGTTAATCAAAGCACCGTTTGAATTATCTAGATTCCTTTCAA
GAAATCTGACTGAACCTATAAAGCTACTTAGAAGCTTAAAAGCGGGGATG
TTGCTCAATATTGGTCGACTCCCTCGCAGCATGGAGGTacaaaaaaaaca
ggaaaatatgttaatataaccaagctcgccctacgattaaaaaagttacg
aggtTTGCATgatcataatctcatatatcgtgtatttttaatgagctctt
ttgtcaattggtgaaatcttattggcttatTTCAGTTTTAGAAATTATAT
GAGACCTCGATGGACATCgtccattgtttctgacatcgatgtaagaaaat
atttggactaaaaaaaggcctgtaaacttggcaattcttcatcaaatgac
aagatttttcaattAATGTTTTCTTCAATGTGAACTCAATTGCTTGATAT
tctcctccaaaattctccagtgactttttgtctaaaaattgatTCTGAAA
TCATGTTTGCTTTTATAAATAACTTTCCATTTTCTaccttaaaaaatata
ttttcgaaacaaaatttaacggataacgaaatggaacataaacttaTTTT
GTGGGGCTaagttttattaaattatcgtatattagaaggctaatATTTTC
AATACTGATagttagaatgttcagagcaaacttgagttctactaaaaagt
ctaatttcatcgggcgagcttagaactttttttttttatttctttttttt
ttNagttctactaaaaagtctaatttcatcgggcgagcttagaatttctt
ttaatacattttataaaagaaatcaaaagactttaaggaccaattaccga
caaattcaactcctgtttttctttatacctccatgctcgCAGAAAATAAC
CTTAGTAAATCCTgcttgaaatattttcattttaaagttaaGGTCATTCA
TAATTTTATCACTAAACCTTTCCTTACATTGCAACCATTTTCTTACAGAA
AGTTGATGTCAGCGACGAAGAACTTATACAAGGCCATCTTaaagtatgtt
tgaactctttttgtgtatttttctgATTTGTTTAGCTCAAGTTTATTTCC
AAAGAAGCTAAAGGAAATTCTGTGATTGTGAATCTTATCTATTTAATGGC
TATAAAGCGTTTTGATGAAttagttttaaattttgaaagcgCAAAGACAC
AAACTACGCTTTTTTAACGTCtctttcattacttttttctttcaagtATA
TTTAACAGAGCATAGACAAATATGATGTACTTCGGAACTGGCCTTTATGA
GAAGTTTACACAATTTGTCTAAATTTTGtaatgaaattttgtaaacaagG
AATCTCTTATTTCTAGGCCAATCAAATGCTCAATAACCACGTGATAGGGT
TACGATCAATGAGAAGACGAGATGACCATCGACGCGCTCTGATTGGTCAA
TTAACCATCCAATCAGAAACGTTATCGCGAATGCCAAATTTGAGCTCAGC
CAATGAAATGACGTTAGAGCAGCTGGCGTCACGTTCGACGCCCGTCATGG
TAGCGGCTCGTAAACAACACGTGGAATTTATAAACGATTTGAAAAGGCCC
TGGTGGGATAGGCTATCTGATGAATCGGCCGTTGAAGACCCTAACAGGCC
CACGGTGCTTGGGAGTCATGTAATAGACTATGAAAAGAATTTCTAAGATA
ATGTTTTCAATTTGAGTGAGACTGGCTTGTCGGTGAAGTTTGAGTGGAGC
TATTTAAAGGTAAGATTGTTTTCTCGTGTTTTGTATTTGCTTCAAATGTG
GATAGGATTGAAAAGAGCTCGAACGAACTGTTGGTGGGATgagatttttg
gcaaaaataccTGACAGTTTTTTGAGGGATTCTGAAATTATGGTCCTTCC
AATATATATCATCCGGGTGGAGTTTTATACTAGCACCTTTATTCATcgtt
ttgaaaagtgaaaaggaAAAGGCTTTACTTTAAAAGTCGTTAACGGTTAT
TCGAATTAAAATAGACGGGCCATACTTTTAAGCCATCAAAAAAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041829	XLOC_041829	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_462	supercontig	scaffold_462:768212..778905 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.609534	0.102059	0.604235	1.27309	3.95126	0.595019	4.05854	2.00625	1.06979	1.56636	0.908083	2.64513	1.22034	2.12497	0.347806	0.367476	0.000910034	1.0821	0.0638733	0.090668	1.95836	1.53642	1.99631	1.30255	6.63074	7.18633	0.590248	0	0.463073	0.0788239

Blast

[Close]

BLAST of TCONS_00066900 vs. Swiss-Prot (Human)
Match: IQCB1 (IQ calmodulin-binding motif-containing protein 1 OS=Homo sapiens GN=IQCB1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 7.107e-41
Identity = 153/578 (26.47%), Postives = 280/578 (48.44%), Query Frame = 2

Query:   80 NSQIANLARDILDADDFAKPSLLLKLKEI---TSSQSQDQEITLIEIWRCRLPNAVIQALRLDFTKVSGMWLTACQLINTAVECCF-FNPRY-LQEIKKEYIPALIQESLNICRSIVKEYQTSSDMFKINLCANLSWIIT-SINTLMKXXXXXXXXXXASKHFLQFLMSEDDRIXXXXXXXXKNIIETNSDVFYHAAESRMHNVADELAYKISSTKDKKVARMTVXXXXXXXXXXXXXXXXFVTKR--YRGFKMYLNKWK-GNGFDENIEYIMGMLEEKAEKMKSSQRHHNAAIVIQSFYRGCKTRNKLKTATLAMSKFQQSYRKKIETKQTLDEKKRLDKVKKDHDERQRRKGFVK-----SKTKQLQSIEGIPAKTVDTFLDNLQQESARKIQASWSGWKTRKVMREIAPHLVKEKAAILLQRQIRRWLEKVRKVKQDARLDMIPDGLNDERRIELSNVLVN-IREKF--PKVDVSDEELIQGHLKANQMLNNHVIGLXXXXXXXXXXXALIGQLTIQSETLSRMPNLSSANEMTLEQLASRSTPVMVAARKQHVEFINDLKRPWWDRLSDESAVE 1762
            + +I ++A ++  + +   P +LLKLKEI   T   S + +    +I+   L    +  L  D++++ G W T  QL      CC    P    +E   E +P+  +  L + R +   +  ++   + +   +   I+T S+  L+   V +   V+ S HFL  L +++ +I    + +L+NI++ NS          ++++ DE+ +K+ ST    V R T + LL L+      + + + +   Y+G +  L+K + G  F + +  ++G+L     +    Q+ H AA +IQ++++G +TR +LK    A+   Q+S+R K  +K  L+    +++ K++ D + + +   +     S+  QL  +E +    V+     ++++SA  IQ  W G++ RK   +    L++ KAA+ LQR   ++L K RK K+          L D RR+EL   + + +R     P  DV   EL   H +A + L ++ +G     R   HR ALI Q++   E L + P+L  A     E   SRS PV   A++ H+  +  ++ PWW +L +ES  E
Sbjct:    7 DPRILSIAAEVAKSPEQNVPVILLKLKEIINITPLGSSELKKIKQDIYCYDLIQYCLLVLSQDYSRIQGGWTTISQLTQILSHCCVGLEPGEDAEEFYNELLPSAAENFLVLGRQLQTCFINAAKAEEKDELLHFFQIVTDSLFWLLGGHVELIQNVLQSDHFLHLLQADNVQIGSAVMMMLQNILQINSGDLLRIGRKALYSILDEVIFKLFSTPSP-VIRSTATKLLLLMAESHQEILILLRQSTCYKGLRRLLSKQETGTEFSQELRQLVGLLSPMVYQEVEEQKLHQAACLIQAYWKGFQTRKRLKKLPSAVIALQRSFRSK-RSKMLLE----INRQKEEEDLKLQLQLQRQRAMRLSRELQLSMLEIVHPGQVEKHYREMEEKSALIIQKHWRGYRERKNFHQQRQSLIEYKAAVTLQRAALKFLAKCRKKKKLFAPWRGLQELTDARRVELKKRVDDYVRRHLGSPMSDVVSREL---HAQAQERLQHYFMGRALEERAQQHREALIAQISTNVEQLMKAPSLKEAEGKEPELFLSRSRPVAAKAKQAHLTTLKHIQAPWWKKLGEESGDE 575

The following BLAST results are available for this feature:

BLAST of TCONS_00066900 vs. Swiss-Prot (Human)

BLAST of TCONS_00066900 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
IQCB1	7.107e-41	26.47	IQ calmodulin-binding motif-containing protein 1 O...	[more]

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TCONS_00066900 (transcript) - C. hemisphaerica

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