TCONS_00066892 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066892
Unique NameTCONS_00066892
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5374

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066892 ID=TCONS_00066892|Name=TCONS_00066892|organism=Clytia hemisphaerica|type=transcript|length=5374bp
taaaagagaaaaagacaTTGCGCTGCAAACACATGATTTATGCACTGCGT
GTGTAGCAGAGAAAGAGAGAGTGCACAAgtgaagtttttcatttttcacg
tATGCAAAGACGAATGTGAGTTTTGTGtaacaaaaaatgaagatgataTT
GATTTAAATAGACTTCCAGTTGAGTTGATTAAACGCTGTTCGATCAATAA
AGATTACTTTTGACCTTCTTTGCACAAAAGTACCTGGTAGAGCTTTCATG
ATCTTTTATTTCACGTGCTTCAAATTTTTGGTgtacgaaaaatattttca
gttgttcTTGAAACACGCTTGAAGAAAGATGGCTGCAGAAATTTCCAAAC
GAGTAATCAAGAAAATTGTCAATGTTAAGGAAACAGAGGACGGACAAAAA
CAATTTGAAGTGGAATGGCAAAACACATGGGAAACTGAAGAAGCTCTCAA
AGCATTAGCTCAATCATCAGAACTGATCGAAAAATTCCTCAAGGGGCAAT
GCGAAGAAAACAATAATTCGATCATCGAACCCAATGAGGAACCGATAGCA
CAAACGAATATCGCCGATGACAATAAAACGAAAGATGTCTCGCTAACGCC
GACAAAAACCGACAGTGAATCGACGACGACGAATTCAATCGCCGATGACG
ATGACGAAGAAGATGGTTTGCAGATCGATGAGTCAATGGAAATTGAAGAA
ACAGCAAAGGAGCCAGCACTCTCTGATCTTTTTTCCTCTCCTCCGAACAA
GAAAGCTGCTGGGAAGAAAGGCATCAATGCTATCATCTCAAGATTacaaa
aaacacaacaaaaagACTATGTGGCTAAAACGCCTCTGTCACCAACCGCT
GCCTGCGAAGCTCCCGAAGGAATGCTACCTACATCCAACGCTACTTCACA
ACTGCAATCCGCCACACGATCTGACAGTAGAACTCATTCTCAATCATCGT
CACCTGCTCCGCCAATGGCCGCCACATCCGCCCTATCGATCGATTTGAAC
GCAGGAGGACACCCATTGAAAACAACGCAGAGCTACGAACTCATTCAAAG
ATTACCTTCGGGTGTCACGACCGTCGTGCGAAATTTGCCGCCCGGTACTG
TATTCTACGAACCCGGGCAAATGCGGACTGGTGTTCCTCCATCGACATCC
GGGCAACCCACAATACTCCAGCACTTTCACCAACCAAACACTGGCGCATC
TGTACTACTCAAATGTAGCATCTGTTCGGAAGTGTTCAGTGACGAAGCGA
AATTCCGCACTCACGCCTTCATGCATGAGCAAGTCTCCCTACTCAAGAAC
GACCCTCCAAAAATGATGAAACCTGGAACGTACGAATGTAAATTCTGTCA
CGCCATCTTTGACGATAAAGAGAGACTGAAGCAACATTATATAGAAAAAC
ACGAGAAAGAGCACGCCCTCATTCAACCGGCTGATCAGCTCTTCCAGTGC
ACTTTCTGTGACTTGAAGTTTCTGCATTATAACGCACTCGTACAACATCA
GCAAACACATTCGCAGAGAAAAGAAGTTTATATTCTTCCCAAACAACAGC
TTCAAGGAGGACAACTGATGACGGCAGACGGCAAACCTGTTCTCTTGGAC
CCAACCGTCATCCCCGTTGACTCCACCCTACTTCACGAGAAAGTCAACGC
ATCAATGAACGAATCGATCCGCATGAAGAAAGAACAACATGATTCGGTTA
AAAGTGAAGACATAGGAACTCCTCCTCCATCGACATCCATGACCACTCTG
GACTTCCAACCAGTCAACGAGGCTCTACACAACAAGGCCAGCACCAGTAG
TGTCAGCGGTGAACGCAAAATGTTCCGTTGTAACATTTGTGACGAGCTGT
TCGAAACCGAAGACGCACGTGCTAAACATTCACTCGTCCACGTCAATCGA
TCCTCGTCCCTCGATTGTCACATCTGTGGTAAACAGTTCCGACATCGCAC
CAATCTTTCCACACACATGATCGTTCATTCAGGCATCAAACCACACCAGT
GCCATATCTGTCTTCGCCGCTTCACACAGAAAGTCAACCTTCAACGACAC
ATGCATATCCACGATGGATCACGACCGTTCACATGTCGAATGTGTCAAAA
ATCGTTCACACAGAAAGCCAACCTACAACGCCATATTTTATCACACACGG
AATACAGCAAGGAAGATGTACTACAAGCACTCAACGAAATCCCAAACGAA
TCTGAAGTCAATAACGCTATCAATGAGAGTTTGACCGAAGCCATGTCTGT
AGTGATGGGCGACAAAAAATCTATAGGCGGATCCACCTCGGCGCCCAATA
CGCCAATTTCACAATCAGCAGACAAAGCTGACCTTCAGTGCGATGTTTGC
GAGAAGTCATTCACAAATAAACTGAATCTCCAGAAACACATGCTCTCGCA
TACAGACTCGAAACCATATCAATGTTTTGTCTGCGGTAAAGCGTTCCGTT
TACGTTTGTCGTTGCAAAAACATTACGCCGTGCATACAAACCATACCACG
TCATTTACGTGTACAACCTGTCAACGTTCATTCCTCTCTAAAACCAACCT
CCAACGTCACATGTTGATTCATATCACGGCCACCAACCAATGCTACCTTT
GCGATCGATCCTTCACAGAAACGGACAGCCTGGAACGTCACTTTGCTGAA
CATGTGGACGAAACGATGCCTGGTGTTTCTCTACCACAACGATACTTCGA
ACAATCGAAGCCAGGGCACAACTACAGATGCGCAACTTGCGATATCATCT
TCGAATCACCAATGATCTTCAGCCAGCATCTTCAATGTCATAAACGTAGC
TTAAATTCAGATTCCAATCTCCTAGACATCGGTGACCCTGACAAAGCATA
CGAAGAGAACCAAGCGTGTCCTCTCCAATGCAACTCGTGTGACCTCGTTT
TCATGTCCGTTGCTAAGCTCGAATCACACATGGCAACGCATTCGATGGAT
GAGAAGGAGAGTTCTTCCCTGGAAAGCATCACTGAAGCAACTGTTAAACC
TTCCAACCCAATCCCTTTGACTTCAGAAGAGATCATGATCACCGAGACGA
GCAACAACGGCAGTATGGCTTCTACCAGCGATATCGGTAAAAGCATCAAA
TCAGAACCTGTCTCGCCAGCAGCTAGTCCGTCCTCTTATCGACTTTCCAG
ATGTCCAGTCTGCAAAGACATGTTTCATTCAAAAGAAGAAATGCAACGAC
ATTATTCGTCTGCTCATTTGAAATCAGACTCTGCGTTACCCGACGACGGA
ATGGAAGTCGACATCATGGAGGAAGATAACGTCTTTGAGGACGACGACGA
CGGGGCAATAGATGACGAACAGTTGGACGAGGTGCTTGATGGAAACTCGC
AAATTCCCGCTTCTGCTTTGGTCAGCGAAAATGAAGAACGGTTGATTCGT
GAGAATGAAGAATTCATCAAAGACAATATCCTTGGTGGACCGGCCGAATA
CGAATCGAAAGGCCGATACGAACGTGGTAACTACAGTTGCAAGATCTGCA
ATCGTGTGTTGACCTATAAGTACAGCTTGGAAAAACACATGCTTCTTCAC
ACTGGCAGTTTCCCGTACAAATGTCAACTGTGCTCCAAAAGGTTTAACCA
CAAAGCCAACTTGGACAAACACTTGGTTGTGCACAGCGGTGAGAAACCGT
ACGTCTGTCATATCTGCTCGCGACCTTTCAGTCAAAAATCCAACCTGCAA
CGTCATCAACTCACGCACACGCAAAACCGTGACTTCGTTTGTGACGTTTG
CGGGAAACGTTTCAACCACATGGCTTCATTGAAAACACATTCACTCATCC
ATACTGGTGCCAAACCGTTCGCTTGTTACGTCTGCCATAAACGCTTCAAC
CAGAAAGGTAACCTCAAACGACACATCCAAACCCATCGTACCGGAAAACG
TGGAAAGATTCGAAGCGATAGTTTATCGAGTGGCGAAGGTAGTTATCGGA
TGGAAAACGATCGATTAGACACGATGAGTTACGAACCGTCCGATGACGAG
ACTTACGAACCGATAGTGATCCCGATGCCTGCGACCATCAAACCATTCCC
GAATATCGAATCACCGACACGACAATCGGAGCGTGTTCGTATCAAGAAGC
AAGAGGTGGAAGAAGAATACGATTTTTATGACGATATGGAAGAGCCTCTC
CCGACTATGATCGGTGGTGGAGCCGAAACCCCACCGAAAGCACCCTCGCC
TGTGCCGAACATCAACGTAACTACTTATCACGAACTCCGACCAAAAGATG
AGATTGTAACTGTCATGCCTTCGGACGCGTTGGAGAACAACAATACAACG
GAAATGAACCGAGAACCGACGAAACCTTTAAACAAAAACGACAATTTCCA
TTGTGATACGTGCTCTAAACTCTTCGTATCGATGGCTAGTCTTGATGCGC
ACAAGAAGAGCGCACACAGTTCGATTGTTTGCGAAACCTGCGGCAAACAT
TTCTCACAAAAAGCTAATCTTTTGAAACATAAACTTATTCATTTAAACAG
GAAACCATTTGTTTGTAAAGTTTGCAACAAAGCCTTCCGACAGAAAGCAA
ATCTTCAACGTCACGAACTGATCCACAGCAAAGACCGGAAGACCGTCAAC
TGTCCCGAATGCAACAAATCTTTCCGTTGCTCGTGGTCGCTCAAACAGCA
CATGAAAAATCACGCTATGAACTCAGGAATCCCATTAGCCCCCGGAAACC
CTGTTGCAACAACCACCACACTCGGTCCGGATAACTTCTTATACGGATGT
TCTGTATGTGGAAAAACCTTTAAAGATAAAGATCAGCTACAAATTCATTT
CAGTGTTCATCAAGCGCCCAGTGCTTTCGGATGTGGTATTTGCAATCAAA
TCTACCCAACCAAAGATGAACTTATTGATCATATGCGGCAACACGATGCC
ACACATATGGTCCCCCACGAGGGCCCCATTCATGTCCCACTTAAAACATA
AGGTCCTGTTGGTGGGAGACCTGTAATATTTTGAACACTTTTCGTATAGA
ACGTTTTACTGATGTCTTTTTTATTGATAgactttgttgtaattttgtaa
atatttcttacATATGACGTTTTTCACCTTATGCTCGTGTCCGAATTGCa
caattttttatcacattTATATAACTTTTTTCGGACGCTTAAGGTTTTTG
CTACATTTTCCTGACAATTTTATAAGATATTTTCACGTTCATcgcctttt
taaaattatttttctaatgtACCTTTTCGTACTAGTAACGTGAAAGTTTT
TTGCATGATAGCTTTAGTatataaaaatgataaatttctaTTGATAGTAT
ATTTTTCAGAGTTTGTAAATTTTTCTGCcattttttggatttatatAAAT
AGTTTTAGATGATCAAAATATATT
Run BLAST on NCBI

transcript from alignment at scaffold_462:562504..573543+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066892 ID=TCONS_00066892|Name=TCONS_00066892|organism=Clytia hemisphaerica|type=transcript|length=11040bp|location=Sequence derived from alignment at scaffold_462:562504..573543+ (Clytia hemisphaerica)
taaaagagaaaaagacaTTGCGCTGCAAACACATGATTTATGCACTGCGT GTGTAGCAGAGAAAGAGAGAGTGCACAAgtgaagtttttcatttttcacg tATGCAAAGACGAATGTGAGTTTTGTGtaacaaaaaatgaagatgataTT GATTTAAATAGACTTCCAGTTGAGTTGATTAAACGCTGTTCGATCAATAA AGATTACTTTTGACCTTCTTTGCACAAAAGTACCTGGTAGAGCTTTCATG ATCTTTTATTTCACGTGCTTCAAATTTTTGGTgtacgaaaaatattttca gttgttcTTGAAACACGCTTGAAGAAAGATGGCTGCAGAAATTTCCAAAC GAGTAATCAAGAAAATTGTCAATGTTAAGGAAACAGAGGTTTGTCGATTG CTCTTTTTTTTTGCATCTTCTTATTtcttcactttcgttttcatttttca ttttcattaaatattgAAAACTTTTCTCTTTGTCAGGTTTTTTCTGAGAA GTGTTTTTTATTATGGAAAGCTTTTTGAAACATCTGCCTTTCCTTTTGTG TATGGTGTCTTTTGATGAAAGAGGGAAATAtaaataatttgtaaattttt ggaaGCTGGCCTGCAGAAGAGCTCCCGATGTATAGCTGATGCAGGATTTC TAGTTATCAAAATCTTTGGTTTGAGTCTACATTTTCTGACAAATCTCTAA ccgatattttttctttctttctctctCTTCAGAAGTAAAAAAATCCTTAT GACACTGGGATGTAATGTAATTCCAAAGTTCTTCATGAGTTTTGTTTTCC CATAAAAATTGATGATAAAAAATGTCTTTATTTTCGACATCGATTTACTA TAATAACATAATAAGTAACAGAGCACCATCGTAGCGGCTCTTAATGACCT ATAAACCTATCCATCTTGAAATTCAGGAGAAAAGCCACCACGGTGGAGTT TTATTGTCAAGAATGTCATTTTGAAATCAACAAGTTTTAAAGCAGCGAGG AAAAGCGATAAGCGAAATAAGAAAGACCCAGGGGGTACATCAACTCCCTT TTTGTAAGGAAATTAAAAAGACCTGCATGATTgacttttttttctgaaat tttatcaaaaaatataattctttaTGTTAATTAATTATAAAGCATCTATC TTAAAATAAGGGCAGCATTCGCTTTCCTGTTTTATCATGCGCTTtataga aaagaagaaaaaaaatcagttgtTGGccttcaattttaaaataaagacAG GGGTCAGTCATTTTCTTCgttgtgaaatttcttcactgtCATGTTAGAAA AATAATCGTCTTAAAAAGGTTCAATGCTCTCATGATCGAACATagcgaag aaaaaacaacaatgtgaaaatttttcaaattttaatgaaaCATAGAGCCC GCGAACTTAAGACTTGAAAAAGGTTTTCTAGGATATCCTGACTTTTTTCT CTAATATGTCATTTCACATCATTTTTCGACTTCTATGTGTGTCTATCGCC tgtttgtttgtgtttttctgtgaactgatatttttcttttactgTAAAGA CAAGAGAGTCATTTTTCACTTCATATTCAAACaaaatactcctttttttg ttttgttttcttttcgtaACTAAATAAGATGGTACTGGTTTTTTGTTTAT ACAAGGAAAAGGACATCTTTTGAATGACTTTTTCCTGCCAGATCTTGACG AATTTGGATAAATCTGATTAATTTTCCTCGTTTTTTCTTCACGTCGACAt acgaaatgaaaaatacagACTCTCTATCCTGGCTATCCCATTTAAGTCTC TTCCGCGatcaaattcaatttaaaaagataaaagagaaaAGGGAGAGACA AAAAAACACACAGACAAAGGGAAATTTCATTGCTTTTTTTCCATTAAATC CCCACTTGATCTTTTTGATTGATCAATGGTTGAAATAATCACACCCCCta atcaaaaatttatgaaaatcatGTAACTTTTACATTTCTTACATAAAAAA GGAACAATGGctgtattttatttattgtcCAATATCTTGTTATTTGGAGC AAAttgttttcgatttttgatcgataaaacaaataaaagtgTTTTTCCCT TTCTCTCTCTCAATGTCGTTGAAAAATAATTACCCTTGAAATTTACAAGG GGCGATTAATCTTCAATTAAAAAATTCGACTGAATTCGATGGAAAAAGCA ATCTTGTTAGTCAATCAAAGAAAACCCCTTCTTCGCTCgaagtttttcaa ttaaaaaaaaagaggcAATGAAATGACTCAAAATCAAAAGACAGCATCTC CTAAATTAGATTTAAAtctatttcttttgaaaaaaggactcggaaaaaga aaagaatttgaaCATCAGCATAATAAAGTTTTTGTGAAGGTATACCGCAT TGCTTATCTCTGTAAAGAGAAAAGctcattttctttttatgaGGTTTCAG TACTAACCTTATCACTACAAAGATGAGTTTTATAAAGTCTTTATGAGTGT TTTCTCTCGCGAAAAGCAAAATAAATGGGTTTAAATCGCATATTGACGAC ACCTTATCTTTCCCATTGTCACACAGAAAAATGAAGTGATTATAAGCAGA AAAGACCTCTATTTTTTAATTCCACTggcttttcaattttctttacttta cacatttttttattttctgtttctCTAATTCTTATATGTCAGCAATTTTA ATTTGAAGTTTCTTTCtgtcaaacatttttttataaatatcaaGATTATG TTATTCTTGATTTCAAAATACCTCTTAACAAAGATCTTGACCGCAGAAAA TATCAACTCAGGCCCAGCCCTCTTCATGTTtcatctttcttttcaaagca TCAATTTTCtctcttattttttgtcatgtCGCAActaatttgttttcatt tcgcACCCTAAAATCTGTCATATGCTTCTTGACAAGAAGAGCAaaggaaa ggcttgaaaattatacGCACAAGCCTCCCTAGGCCTTGTTTGAAACTAAT TTGGATGTTAATTACCCCCGTGATGATTTAAACATTAATTAGATGGCTCT TTTCGTGTATTGCGCAATATAAACGTAATTAAAGATTTTagcttttgaat gaaaaaatccgGGCCTTGGGTACTtgggtttaaagtttaaaatgttGATT TTAGTTGCCAAGGGAGAGTAGACGGAGGTCggtatttttatccatttttc aCGTCATTATCAAAAgttctctttaaaggagagagAAGAAACCCTGTTCC ATTTCATTTGTTTGTGTGTTCGTCATATATGAGTAGTATGTAGGATGGAA AAATATCTCCTTTTTTCGTAGCCGttgttttataaataaaatgtaaaagg aaaacaaatagTGAATCGGAAGCGAGAATTTCACATGTATTGTTTTCATT ATTGAAGTGGTATTTCGTTACCTATACACCTTATTTCCTCTGCtgtttta tttagttttgaCTTTTCATTGTCCTCTTGTTAATCCAATCTTTTACTTAA ACTGTCCTTTTCTTTTGTCAACATATTGAAAATATCTAGTAATCTGTGCA ACATTAAATCAAGAAATCCTTAATCGCATTACTGTTTTGTTTCGTCTATT TCTTCTCATCTCTAATTATTTCATGTGAATGaagattgaatttaaatttt ctctttATAAAGGCCCTATAAGGTGCATTATAAATCGGACAGAAAAAAGA TGCCTCCATTTTGTTGCCATGCGTCAAACTTTTGTTTCGGAGTATTAAAA ATAGGCATTTTGTACTAAATACCCACCCTCCTATCTTACTCAAAAGTATC GACAGCTTTCATTTTCAGcaccaaaatcgaaaaaatcgaaattttggaAC AGAAAGGACcaaaaaatacatgaaaatgtGGCCTAAATTTTCGGTTCTTC TATGTTCTTAAAAAGATAACTCCTCCAAAATGCAACTCCTTTGGTTACGC GTCGAATGTAGTTTACAGCAAACATTATCTGTGTACCCCTCTACTTACAA TAACTATAACAGACATTTTTCATTCGATTCCTTCAACAGGACGGACAAAA ACAATTTGAAGTGGAATGGCAAAACACATGGGAAACTGAAGAAGCTCTCA AAGCATTAGCTCAATCATCAGAACTGATCGAAAAATTCCTCAAGGGGCAA TGCGAAGAAAACAATAATTCGATCATCGAACCCAATGAGGAACCGATAGC ACAAACGAATATCGCCGATGACAATAAAACGAAAGATGTCTCGCTAACGC CGACAAAAACCGACAGTGAATCGACGACGACGAATTCAATCGCCGATGAC GATGACGAAGAAGATGGTTTGCAGATCGATGAGGTTCGTTATTTGATTGC TAAGGTTGGCATGCCCTCTTACTTCCTATTATGGtatttaaaattattct aaTAATGTCTCAAAAATGCGAAAATGAATTTAGTCTTTAGTTTGCTTACT TGCCTGAATTAATTAGCATCCCTTTTAGTACTCGCTACGAAAGTGTATCT CGCGTTAAACGTAGCGTAGTAGTATTTCTACAGACATTTTCAACGCTTTT GGGCCTTTGGTGCGGAACTCAAATTGAATTTTAGCAACCATCGAAACGGG AGTTATAGTTTTGTACATCGTAACTAATTAACTTTCAATAACTTTTGCTA CCCCAGCAGTCAATGGAAATTGAAGAAACAGCAAAGGAGCCAGCACTCTC TGATCTTTTTTCCTCTCCTCCGAACAAGAAAGCTGCTGGGAAGAAAGGCA TCAATGCTATCATCTCAAGATTacaaaaaacacaacaaaaaggTTCGCTA GCCATTCTCACACAAATTTGAAGTTAAATTTTTGGGTAGTCCAATTTATA GTATTGAAGAACTGGTTAAGATTTTAGTGCTCCCAATTAAAACTAGGCTT TAATCCCGGTTGCTTGAACAGCTTCGATGGGTTTTACAAGTTTGGAGAAA TATAgtttataatatataatataaaggGTTTatggttggaaattttgggt gttttggGTATTTTTACCAGGAAGGGTTGAAGTAAAAGCTAAAAAGTCCT AAGAACAACTTTAAGAAGGACGGCCTATTCAGGTCTGTAAAACAAGGAAA AGATATCAATACACAAGCTGCCCAATTATGtccgaaatgaaaaagaaaag agtaATTATGTTTGGcgttttttgtttgattgtttgtttGATTGCTATCT TGCGGGTTTCTTCGCTAATCACTTCAACATAATaggattttgaaaatgat ggatAACGAGTTTAGTCTTAAAATATCTTCTCtaaatctattgttttcaa ttctTTAATTTTCCCATTATCCTCTAGAAGTCATTTTTAAAGTTACTGAT TTAATGACCCATTTATGGTCTGCCTCCGTTTAAATTAATGACATTCTTTT TACATGcttttctaaaattgaaaaacgaagataaCCTTCCCCCTTTCTTT CTCCTTCTTTCTTGATATGGATTGTGATAAGGTAATTATTGAAATCTTGA AGAGCTTCTAGCACTGACTGATTCCTAGATTATATCTGTATATcccgaca tttttttctgaGAAACAAAACAATCAATAAACGAGGTTGAAAACCCCCTC ACTCATTTTTTCTAGGACTCAAACCAACAGACTTGCCACCAATCAGCAAT GGCAGTACAGATCTTTCTTCAGACTATGTGGCTAAAACGCCTCTGTCACC AACCGCTGCCTGCGAAGCTCCCGAAGGAATGCTACCTACATCCAACGCTA CTTCACAACTGCAATCCGCCACACGATCTGACAGTAGAACTCATTCTCAA TCATCGTCACCTGCTCCGCCAATGGCCGCCACATCCGCCCTATCGATCGA TTTGAACGCAGGAGGACACCCATTGAAAACAACGCAGAGCTACGAACTCA TTCAAAGGTACATCTTCAATTCTCCTGGAAGTCCAcgtttcttcttttgt ttttttttcattgaatcaCCCTAAACATATCTGGCGTGTCAGGTTTATGA CTGAATCGGATTGATTGATATGATCAGTATTCTTAAGGATTCAATTGTAC CATTGTAAACATGTACCAGACAGACAGGGCAGTCCCTGGTATAAAAGCAT CGCTCGGTTGGCTAGGATAGACTAGGATTTAAACCATACATCTCAATGAT GTGGTTTACTTTTTAGATTACCTTCGGGTGTCACGACCGTCGTGCGAAAT TTGCCGCCCGGTACTGTATTCTACGAACCCGGGCAAATGCGGACTGGTGT TCCTCCATCGACATCCGGGCAACCCACAATACTCCAGCACTTTCACCAAC CAAACACTGGCGCATCTGTACTACTCAAATGTAGCATCTGTTCGGAAGTG TTCAGTGACGAAGCGAAATTCCGCACTCACGCCTTCATGCATGAGCAAGT CTCCCTACTCAAGAACGACCCTCCAAAAATGATGAAACCTGGAACGTACG AATGTAAATTCTGTCACGCCATCTTTGACGATAAAGAGAGACTGAAGCAA CATTATATAGAAAAACACGAGAAAGAGCACGCCCTCATTCAACCGGCTGA TCAGCTCTTCCAGTGCACTTTCTGTGACTTGAAGTTTCTGCATTATAACG CACTCGTACAACATCAGCAAACACATTCGCAGAGAAAAGAAGTTTATATT CTTCCCAAACAACAGCTTCAAGGTATGTATTATGCTTTCACCAAGGGCTT TTTGTTACCTACCTTTCCTTTGAACACATTTGCCACGTTTCTGGGTTAAG GTATAAAGCGTACTGCAGGTAGAAAGGAATAATTACTTCGTTAAAAGTAC AGTAAGTAATGAAGATTTCTATGTGAAAGTATATCGCGACTAAGCTATCA AAGTGTCTCTGTTAAGTATTCCGTAaggatttttaaatttaatccATTTT TTCTTTCGTAGGAGGACAACTGATGACGGCAGACGGCAAACCTGTTCTCT TGGACCCAACCGTCATCCCCGTTGACTCCACCCTACTTCACGAGAAAGTC AACGCATCAATGAACGAATCGATCCGCATGAAGAAAGAACAACATGATTC GGTTAAAAGTGAAGACATAGGAACTCCTCCTCCATCGACATCCATGACCA CTCTGGACTTCCAACCAGTCAACGAGGCTCTACACAACAAGGCCAGCACC AGTAGTGTCAGCGGTGAACGCAAAATGTTCCGTTGTAACATTTGTGACGA GCTGTTCGAAACCGAAGACGCACGTGCTAAACATTCACTCGTCCACGTCA ATCGATCCTCGTCCCTCGATTGTCACATCTGTGGTAAACAGTTCCGACAT CGCACCAATCTTTCCACACACATGATCGTTCATTCAGGCATCAAACCACA CCAGTGCCATATCTGTCTTCGCCGCTTCACACAGAAAGTCAACCTTCAAC GACACATGCATATCCACGATGGATCACGACCGTTCACATGTCGAATGTGT CAAAAATCGTTCACACAGAAAGCCAACCTACAACGCCATATTTTATCACA CACGGAATACAGCAAGGAAGATGTACTACAAGCACTCAACGAAATCCCAA ACGAATCTGAAGTCAATAACGCTATCAATGAGAGTTTGACCGAAGCCATG TCTGTAGTGATGGGCGACAAAAAATCTATAGGCGGATCCACCTCGGCGCC CAATACGCCAATTTCACAATCAGCAGACAAAGCTGACCTTCAGTGCGATG TTTGCGAGAAGTCATTCACAAATAAACTGAATCTCCAGAAACACATGCTC TCGCATACAGACTCGAAACCATATCAATGTTTTGTCTGCGGTAAAGCGTT CCGTTTACGTTTGTCGTTGCAAAAACATTACGCCGTGCATACAAACCATA CCACGTCATTTACGTGTACAACCTGTCAACGTTCATTCCTCTCTAAAACC AACCTCCAACGTCACATGTTGATTCATATCACGGCCACCAACCAATGCTA CCTTTGCGATCGATCCTTCACAGAAACGGACAGCCTGGAACGTCACTTTG CTGAACATGTGGACGAAACGATGCCTGGTGTTTCTCTACCACAACGATAC TTCGAACAATCGAAGCCAGGGCACAACTACAGATGCGCAACTTGCGATAT CATCTTCGAATCACCAATGATCTTCAGCCAGCATCTTCAATGTCATAAAC GTAGCTTAAATTCAGATTCCAATCTCCTAGACATCGGTGACCCTGACAAA GCATACGAAGAGAACCAAGCGTGTCCTCTCCAATGCAACTCGTGTGACCT CGTTTTCATGTCCGTTGCTAAGCTCGAATCACACATGGCAACGCATTCGA TGGATGAGAAGGAGAGTTCTTCCCTGGAAAGCATCACTGAAGCAACTGTT AAACCTTCCAACCCAATCCCTTTGACTTCAGAAGAGATCATGATCACCGA GACGAGCAACAACGGCAGTATGGCTTCTACCAGCGATATCGGTAAAAGCA TCAAATCAGAACCTGTCTCGCCAGCAGCTAGTCCGTCCTCTTATCGACTT TCCAGATGTCCAGTCTGCAAAGACATGTTTCATTCAAAAGAAGAAATGCA ACGACATTATTCGTCTGCTCATTTGAAATCAGACTCTGCGTTACCCGACG ACGGAATGGAAGTCGACATCATGGAGGAAGATAACGTCTTTGAGGACGAC GACGACGGGGCAATAGATGACGAACAGTTGGACGAGGTGCTTGATGGAAA CTCGCAAATTCCCGCTTCTGCTTTGGTCAGCGAAAATGAAGAACGGTTGA TTCGTGAGAATGAAGAATTCATCAAAGACAATATCCTTGGTGGACCGGCC GAATACGAATCGAAAGGCCGATACGAACGTGGTAACTACAGTTGCAAGAT CTGCAATCGTGTGTTGACCTATAAGTACAGCTTGGAAAAACACATGCTTC TTCACACTGGCAGTTTCCCGTACAAATGTCAACTGTGCTCCAAAAGGTtc gttttttatctttcttggTATtagaaattttggaatttcttcCATTTCTT CAAGGGTTAGTTGCCCAACCTGCTCTTTACTAACTTACACCAATTGATTC AGAATGACTTTTTATTACTAAGGTTTTCCATAAAAAAGAGCTGTATTGTC TTTGATTTTCCGTCTTTCTAGTTTTTAATATGCTCAACATTTTACCTAAT GGCTACATCCCTGTATCGCGTTATATTTCTTCACATTATTTTCCGATGGA CCTTGATGTATATGAGTTAATTTTCATCAATCAAACTTCGATGTTTTTCT TCCATAGGTTTAACCACAAAGCCAACTTGGACAAACACTTGGTTGTGCAC AGCGGTGAGAAACCGTACGTCTGTCATATCTGCTCGCGACCTTTCAGTCA AAAATCCAACCTGCAACGTCATCAACTCACGCACACGCAAAACCGTGACT TCGTTTGTGACGTTTGCGGGAAACGTTTCAACCACATGGCTTCATTGAAA ACACATTCACTCATCCATACTGGTGCCAAACCGTTCGCTTGTTACGTCTG CCATAAACGCTTCAACCAGAAAGGTAACCTCAAACGACACATCCAAACCC ATCGTACCGGAAAACGTGGAAAGATTCGAAGCGATAGTTTATCGAGTGGC GAAGGTAGTTATCGGATGGAAAACGATCGATTAGACACGATGAGTTACGA ACCGTCCGATGACGAGACTTACGAACCGATAGTGATCCCGATGCCTGCGA CCATCAAACCATTCCCGAATATCGAATCACCGACACGACAATCGGAGCGT GTTCGTATCAAGAAGCAAGAGGTGGAAGAAGAATACGATTTTTATGACGA TATGGAAGAGCCTCTCCCGACTATGATCGGTGGTGGAGCCGAAACCCCAC CGAAAGCACCCTCGCCTGTGCCGAACATCAACGTAACTACTTATCACGAA CTCCGACCAAAAGATGAGATTGTAACTGTCATGCCTTCGGACGCGTTGGA GAACAACAATACAACGGAAATGAACCGAGAACCGACGAAACCTTTAAACA AAAACGACAATTTCCATTGTGATACGTGCTCTAAACTCTTCGTATCGATG GCTAGTCTTGATGCGCACAAGAAGAGCGCACACAGTTCGATTGTTTGCGA AACCTGCGGCAAACATTTCTCACAAAAAGCTAATCTTTTGAAACATAAAC TTATTCATTTAAACAGGAAACCATTTGTTTGTAAAGTTTGCAACAAAGCC TTCCGACAGAAAGCAAATCTTCAACGTCACGAACTGATCCACAGCAAAGA CCGGAAGACCGTCAACTGTCCCGAATGCAACAAATCTTTCCGTTGCTCGT GGTCGCTCAAACAGCACATGAAAAATCACGCTATGAACTCAGGAATCCCA TTAGCCCCCGGAAACCCTGTTGCAACAACCACCACACTCGGTCCGGATAA CTTCTTATACGGATGTTCTGTATGTGGAAAAACCTTTAAAGATAAAGATC AGCTACAAATTCATTTCAGTGTTCATCAAGCGCCCAGTGCTTTCGGATGT GGTATTTGCAATCAAATCTACCCAACCAAAGATGAACTTATTGATCATAT GCGGCAACACGATGCCACACATATGGTCCCCCACGAGGGCCCCATTCATG TCCCACTTAAAACATAAGGTCCTGTTGGTGGGAGACCTGTAATATTTTGA ACACTTTTCGTATAGAACGTTTTACTGATGTCTTTTTTATTGATAgactt tgttgtaattttgtaaatatttcttacATATGACGTTTTTCACCTTATGC TCGTGTCCGAATTGCacaattttttatcacattTATATAACTTTTTTCGG ACGCTTAAGGTTTTTGCTACATTTTCCTGACAATTTTATAAGATATTTTC ACGTTCATcgcctttttaaaattatttttctaatgtACCTTTTCGTACTA GTAACGTGAAAGTTTTTTGCATGATAGCTTTAGTatataaaaatgataaa tttctaTTGATAGTATATTTTTCAGAGTTTGTAAATTTTTCTGCcatttt ttggatttatatAAATAGTTTTAGATGATCAAAATATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041823XLOC_041823Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066892-exon-scaffold_462-1491911889:562504..562891TCONS_00066892-exon-scaffold_462-1491911889:562504..562891Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1510915933:562504..562891TCONS_00066892-exon-scaffold_462-1510915933:562504..562891Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1575043694:562504..562891TCONS_00066892-exon-scaffold_462-1575043694:562504..562891Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1491911889:566543..566836TCONS_00066892-exon-scaffold_462-1491911889:566543..566836Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1510915933:566543..566836TCONS_00066892-exon-scaffold_462-1510915933:566543..566836Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1575043694:566543..566836TCONS_00066892-exon-scaffold_462-1575043694:566543..566836Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1491911889:567163..567295TCONS_00066892-exon-scaffold_462-1491911889:567163..567295Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1510915933:567163..567295TCONS_00066892-exon-scaffold_462-1510915933:567163..567295Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1575043694:567163..567295TCONS_00066892-exon-scaffold_462-1575043694:567163..567295Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1491911889:568176..568410TCONS_00066892-exon-scaffold_462-1491911889:568176..568410Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1510915933:568176..568410TCONS_00066892-exon-scaffold_462-1510915933:568176..568410Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1575043694:568176..568410TCONS_00066892-exon-scaffold_462-1575043694:568176..568410Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1491911889:568670..569175TCONS_00066892-exon-scaffold_462-1491911889:568670..569175Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1510915933:568670..569175TCONS_00066892-exon-scaffold_462-1510915933:568670..569175Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1575043694:568670..569175TCONS_00066892-exon-scaffold_462-1575043694:568670..569175Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1491911889:569415..571449TCONS_00066892-exon-scaffold_462-1491911889:569415..571449Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1510915933:569415..571449TCONS_00066892-exon-scaffold_462-1510915933:569415..571449Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1575043694:569415..571449TCONS_00066892-exon-scaffold_462-1575043694:569415..571449Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1491911889:571761..573543TCONS_00066892-exon-scaffold_462-1491911889:571761..573543Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1510915933:571761..573543TCONS_00066892-exon-scaffold_462-1510915933:571761..573543Clytia hemisphaericaexon
TCONS_00066892-exon-scaffold_462-1575043694:571761..573543TCONS_00066892-exon-scaffold_462-1575043694:571761..573543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:562504..573543 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (1.5416 tpm) - - (55.2036 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.4914 1.9686 1.5416 2.9529 55.2036 33.9431 9.81924 8.93698 2.75626 3.56061 2.61211 3.79979 6.66206 7.13022 2.34975 2.56141 4.81564 3.6884 4.80026 3.38273 5.3616 8.26781 6.25426 8.45707 5.35992 6.88585 13.1219 8.03785 6.93596 7.972
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066892 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
500100015002000250030003500400045005000Expect = 2.29e-32 / Id = 28.25Expect = 2.50e-28 / Id = 28.25Expect = 1.64e-30 / Id = 28.25Expect = 9.33e-24 / Id = 28.25Expect = 7.18e-27 / Id = 28.25Expect = 1.83e-47 / Id = 28.25Expect = 9.26e-27 / Id = 28.25Expect = 3.62e-26 / Id = 28.25Expect = 6.67e-26 / Id = 28.25Expect = 1.12e-25 / Id = 28.25Expect = 1.57e-25 / Id = 28.25Expect = 1.97e-25 / Id = 28.25Expect = 2.70e-25 / Id = 28.25Expect = 3.70e-25 / Id = 28.25Expect = 3.10e-24 / Id = 28.25Expect = 6.60e-23 / Id = 28.25Expect = 8.66e-23 / Id = 28.25Expect = 5.72e-21 / Id = 28.25Expect = 1.01e-21 / Id = 28.25Expect = 1.09e-21 / Id = 28.25Expect = 1.30e-16 / Id = 28.25Expect = 1.61e-19 / Id = 28.25Expect = 5.63e-21 / Id = 28.25Expect = 2.58e-20 / Id = 28.25Expect = 2.37e-19 / Id = 28.25Expect = 1.47e-16 / Id = 28.25SequenceZNF91
Match NameE-valueIdentityDescription
ZNF911.834e-4728.25Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE... [more]
back to top