TCONS_00066891 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066891
Unique NameTCONS_00066891
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5601

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066891 ID=TCONS_00066891|Name=TCONS_00066891|organism=Clytia hemisphaerica|type=transcript|length=5601bp
GGTTGActgttgttttctttttacaaataaaaaaaaatcaagacaaaaaa
tcacattccattgtattgacaattaaatctggtctgtaaaattaaTTACG
GATATTGAAAATTGTTGAAGCGAGGAAAAGAATCAATGTTCTTCATAAGT
CAATTTAGTGTGTGTGAtcataaaagagaaaaagacaTTGCGCTGCAAAC
ACATGATTTATGCACTGCGTGTGTAGCAGAGAAAGAGAGAGTGCACAAgt
gaagtttttcatttttcacgtATGCAAAGACGAATGTGAGTTTTGTGtaa
caaaaaatgaagatgataTTGATTTAAATAGACTTCCAGTTGAGTTGATT
AAACGCTGTTCGATCAATAAAGATTACTTTTGACCTTCTTTGCACAAAAG
TACCTGGTAGAGCTTTCATGATCTTTTATTTCACGTGCTTCAAATTTTTG
GTgtacgaaaaatattttcagttgttcTTGAAACACGCTTGAAGAAAGAT
GGCTGCAGAAATTTCCAAACGAGTAATCAAGAAAATTGTCAATGTTAAGG
AAACAGAGGACGGACAAAAACAATTTGAAGTGGAATGGCAAAACACATGG
GAAACTGAAGAAGCTCTCAAAGCATTAGCTCAATCATCAGAACTGATCGA
AAAATTCCTCAAGGGGCAATGCGAAGAAAACAATAATTCGATCATCGAAC
CCAATGAGGAACCGATAGCACAAACGAATATCGCCGATGACAATAAAACG
AAAGATGTCTCGCTAACGCCGACAAAAACCGACAGTGAATCGACGACGAC
GAATTCAATCGCCGATGACGATGACGAAGAAGATGGTTTGCAGATCGATG
AGTCAATGGAAATTGAAGAAACAGCAAAGGAGCCAGCACTCTCTGATCTT
TTTTCCTCTCCTCCGAACAAGAAAGCTGCTGGGAAGAAAGGCATCAATGC
TATCATCTCAAGATTacaaaaaacacaacaaaaagGACTCAAACCAACAG
ACTTGCCACCAATCAGCAATGGCAGTACAGATCTTTCTTCAGACTATGTG
GCTAAAACGCCTCTGTCACCAACCGCTGCCTGCGAAGCTCCCGAAGGAAT
GCTACCTACATCCAACGCTACTTCACAACTGCAATCCGCCACACGATCTG
ACAGTAGAACTCATTCTCAATCATCGTCACCTGCTCCGCCAATGGCCGCC
ACATCCGCCCTATCGATCGATTTGAACGCAGGAGGACACCCATTGAAAAC
AACGCAGAGCTACGAACTCATTCAAAGATTACCTTCGGGTGTCACGACCG
TCGTGCGAAATTTGCCGCCCGGTACTGTATTCTACGAACCCGGGCAAATG
CGGACTGGTGTTCCTCCATCGACATCCGGGCAACCCACAATACTCCAGCA
CTTTCACCAACCAAACACTGGCGCATCTGTACTACTCAAATGTAGCATCT
GTTCGGAAGTGTTCAGTGACGAAGCGAAATTCCGCACTCACGCCTTCATG
CATGAGCAAGTCTCCCTACTCAAGAACGACCCTCCAAAAATGATGAAACC
TGGAACGTACGAATGTAAATTCTGTCACGCCATCTTTGACGATAAAGAGA
GACTGAAGCAACATTATATAGAAAAACACGAGAAAGAGCACGCCCTCATT
CAACCGGCTGATCAGCTCTTCCAGTGCACTTTCTGTGACTTGAAGTTTCT
GCATTATAACGCACTCGTACAACATCAGCAAACACATTCGCAGAGAAAAG
AAGTTTATATTCTTCCCAAACAACAGCTTCAAGGAGGACAACTGATGACG
GCAGACGGCAAACCTGTTCTCTTGGACCCAACCGTCATCCCCGTTGACTC
CACCCTACTTCACGAGAAAGTCAACGCATCAATGAACGAATCGATCCGCA
TGAAGAAAGAACAACATGATTCGGTTAAAAGTGAAGACATAGGAACTCCT
CCTCCATCGACATCCATGACCACTCTGGACTTCCAACCAGTCAACGAGGC
TCTACACAACAAGGCCAGCACCAGTAGTGTCAGCGGTGAACGCAAAATGT
TCCGTTGTAACATTTGTGACGAGCTGTTCGAAACCGAAGACGCACGTGCT
AAACATTCACTCGTCCACGTCAATCGATCCTCGTCCCTCGATTGTCACAT
CTGTGGTAAACAGTTCCGACATCGCACCAATCTTTCCACACACATGATCG
TTCATTCAGGCATCAAACCACACCAGTGCCATATCTGTCTTCGCCGCTTC
ACACAGAAAGTCAACCTTCAACGACACATGCATATCCACGATGGATCACG
ACCGTTCACATGTCGAATGTGTCAAAAATCGTTCACACAGAAAGCCAACC
TACAACGCCATATTTTATCACACACGGAATACAGCAAGGAAGATGTACTA
CAAGCACTCAACGAAATCCCAAACGAATCTGAAGTCAATAACGCTATCAA
TGAGAGTTTGACCGAAGCCATGTCTGTAGTGATGGGCGACAAAAAATCTA
TAGGCGGATCCACCTCGGCGCCCAATACGCCAATTTCACAATCAGCAGAC
AAAGCTGACCTTCAGTGCGATGTTTGCGAGAAGTCATTCACAAATAAACT
GAATCTCCAGAAACACATGCTCTCGCATACAGACTCGAAACCATATCAAT
GTTTTGTCTGCGGTAAAGCGTTCCGTTTACGTTTGTCGTTGCAAAAACAT
TACGCCGTGCATACAAACCATACCACGTCATTTACGTGTACAACCTGTCA
ACGTTCATTCCTCTCTAAAACCAACCTCCAACGTCACATGTTGATTCATA
TCACGGCCACCAACCAATGCTACCTTTGCGATCGATCCTTCACAGAAACG
GACAGCCTGGAACGTCACTTTGCTGAACATGTGGACGAAACGATGCCTGG
TGTTTCTCTACCACAACGATACTTCGAACAATCGAAGCCAGGGCACAACT
ACAGATGCGCAACTTGCGATATCATCTTCGAATCACCAATGATCTTCAGC
CAGCATCTTCAATGTCATAAACGTAGCTTAAATTCAGATTCCAATCTCCT
AGACATCGGTGACCCTGACAAAGCATACGAAGAGAACCAAGCGTGTCCTC
TCCAATGCAACTCGTGTGACCTCGTTTTCATGTCCGTTGCTAAGCTCGAA
TCACACATGGCAACGCATTCGATGGATGAGAAGGAGAGTTCTTCCCTGGA
AAGCATCACTGAAGCAACTGTTAAACCTTCCAACCCAATCCCTTTGACTT
CAGAAGAGATCATGATCACCGAGACGAGCAACAACGGCAGTATGGCTTCT
ACCAGCGATATCGGTAAAAGCATCAAATCAGAACCTGTCTCGCCAGCAGC
TAGTCCGTCCTCTTATCGACTTTCCAGATGTCCAGTCTGCAAAGACATGT
TTCATTCAAAAGAAGAAATGCAACGACATTATTCGTCTGCTCATTTGAAA
TCAGACTCTGCGTTACCCGACGACGGAATGGAAGTCGACATCATGGAGGA
AGATAACGTCTTTGAGGACGACGACGACGGGGCAATAGATGACGAACAGT
TGGACGAGGTGCTTGATGGAAACTCGCAAATTCCCGCTTCTGCTTTGGTC
AGCGAAAATGAAGAACGGTTGATTCGTGAGAATGAAGAATTCATCAAAGA
CAATATCCTTGGTGGACCGGCCGAATACGAATCGAAAGGCCGATACGAAC
GTGGTAACTACAGTTGCAAGATCTGCAATCGTGTGTTGACCTATAAGTAC
AGCTTGGAAAAACACATGCTTCTTCACACTGGCAGTTTCCCGTACAAATG
TCAACTGTGCTCCAAAAGGTTTAACCACAAAGCCAACTTGGACAAACACT
TGGTTGTGCACAGCGGTGAGAAACCGTACGTCTGTCATATCTGCTCGCGA
CCTTTCAGTCAAAAATCCAACCTGCAACGTCATCAACTCACGCACACGCA
AAACCGTGACTTCGTTTGTGACGTTTGCGGGAAACGTTTCAACCACATGG
CTTCATTGAAAACACATTCACTCATCCATACTGGTGCCAAACCGTTCGCT
TGTTACGTCTGCCATAAACGCTTCAACCAGAAAGGTAACCTCAAACGACA
CATCCAAACCCATCGTACCGGAAAACGTGGAAAGATTCGAAGCGATAGTT
TATCGAGTGGCGAAGGTAGTTATCGGATGGAAAACGATCGATTAGACACG
ATGAGTTACGAACCGTCCGATGACGAGACTTACGAACCGATAGTGATCCC
GATGCCTGCGACCATCAAACCATTCCCGAATATCGAATCACCGACACGAC
AATCGGAGCGTGTTCGTATCAAGAAGCAAGAGGTGGAAGAAGAATACGAT
TTTTATGACGATATGGAAGAGCCTCTCCCGACTATGATCGGTGGTGGAGC
CGAAACCCCACCGAAAGCACCCTCGCCTGTGCCGAACATCAACGTAACTA
CTTATCACGAACTCCGACCAAAAGATGAGATTGTAACTGTCATGCCTTCG
GACGCGTTGGAGAACAACAATACAACGGAAATGAACCGAGAACCGACGAA
ACCTTTAAACAAAAACGACAATTTCCATTGTGATACGTGCTCTAAACTCT
TCGTATCGATGGCTAGTCTTGATGCGCACAAGAAGAGCGCACACAGTTCG
ATTGTTTGCGAAACCTGCGGCAAACATTTCTCACAAAAAGCTAATCTTTT
GAAACATAAACTTATTCATTTAAACAGGAAACCATTTGTTTGTAAAGTTT
GCAACAAAGCCTTCCGACAGAAAGCAAATCTTCAACGTCACGAACTGATC
CACAGCAAAGACCGGAAGACCGTCAACTGTCCCGAATGCAACAAATCTTT
CCGTTGCTCGTGGTCGCTCAAACAGCACATGAAAAATCACGCTATGAACT
CAGGAATCCCATTAGCCCCCGGAAACCCTGTTGCAACAACCACCACACTC
GGTCCGGATAACTTCTTATACGGATGTTCTGTATGTGGAAAAACCTTTAA
AGATAAAGATCAGCTACAAATTCATTTCAGTGTTCATCAAGCGCCCAGTG
CTTTCGGATGTGGTATTTGCAATCAAATCTACCCAACCAAAGATGAACTT
ATTGATCATATGCGGCAACACGATGCCACACATATGGTCCCCCACGAGGG
CCCCATTCATGTCCCACTTAAAACATAAGGTCCTGTTGGTGGGAGACCTG
TAATATTTTGAACACTTTTCGTATAGAACGTTTTACTGATGTCTTTTTTA
TTGATAgactttgttgtaattttgtaaatatttcttacATATGACGTTTT
TCACCTTATGCTCGTGTCCGAATTGCacaattttttatcacattTATATA
ACTTTTTTCGGACGCTTAAGGTTTTTGCTACATTTTCCTGACAATTTTAT
AAGATATTTTCACGTTCATcgcctttttaaaattatttttctaatgtACC
TTTTCGTACTAGTAACGTGAAAGTTTTTTGCATGATAGCTTTAGTatata
aaaatgataaatttctaTTGATAGTATATTTTTCAGAGTTTGTAAATTTT
TCTGCcattttttggatttatatAAATAGTTTTAGATGATCAAAATATAT
T
Run BLAST on NCBI

transcript from alignment at scaffold_462:562334..573543+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066891 ID=TCONS_00066891|Name=TCONS_00066891|organism=Clytia hemisphaerica|type=transcript|length=11210bp|location=Sequence derived from alignment at scaffold_462:562334..573543+ (Clytia hemisphaerica)
GGTTGActgttgttttctttttacaaataaaaaaaaatcaagacaaaaaa tcacattccattgtattgacaattaaatctggtctgtaaaattaaTTACG GATATTGAAAATTGTTGAAGCGAGGAAAAGAATCAATGTTCTTCATAAGT CAATTTAGTGTGTGTGAtcataaaagagaaaaagacaTTGCGCTGCAAAC ACATGATTTATGCACTGCGTGTGTAGCAGAGAAAGAGAGAGTGCACAAgt gaagtttttcatttttcacgtATGCAAAGACGAATGTGAGTTTTGTGtaa caaaaaatgaagatgataTTGATTTAAATAGACTTCCAGTTGAGTTGATT AAACGCTGTTCGATCAATAAAGATTACTTTTGACCTTCTTTGCACAAAAG TACCTGGTAGAGCTTTCATGATCTTTTATTTCACGTGCTTCAAATTTTTG GTgtacgaaaaatattttcagttgttcTTGAAACACGCTTGAAGAAAGAT GGCTGCAGAAATTTCCAAACGAGTAATCAAGAAAATTGTCAATGTTAAGG AAACAGAGGTTTGTCGATTGCTCTTTTTTTTTGCATCTTCTTATTtcttc actttcgttttcatttttcattttcattaaatattgAAAACTTTTCTCTT TGTCAGGTTTTTTCTGAGAAGTGTTTTTTATTATGGAAAGCTTTTTGAAA CATCTGCCTTTCCTTTTGTGTATGGTGTCTTTTGATGAAAGAGGGAAATA taaataatttgtaaatttttggaaGCTGGCCTGCAGAAGAGCTCCCGATG TATAGCTGATGCAGGATTTCTAGTTATCAAAATCTTTGGTTTGAGTCTAC ATTTTCTGACAAATCTCTAAccgatattttttctttctttctctctCTTC AGAAGTAAAAAAATCCTTATGACACTGGGATGTAATGTAATTCCAAAGTT CTTCATGAGTTTTGTTTTCCCATAAAAATTGATGATAAAAAATGTCTTTA TTTTCGACATCGATTTACTATAATAACATAATAAGTAACAGAGCACCATC GTAGCGGCTCTTAATGACCTATAAACCTATCCATCTTGAAATTCAGGAGA AAAGCCACCACGGTGGAGTTTTATTGTCAAGAATGTCATTTTGAAATCAA CAAGTTTTAAAGCAGCGAGGAAAAGCGATAAGCGAAATAAGAAAGACCCA GGGGGTACATCAACTCCCTTTTTGTAAGGAAATTAAAAAGACCTGCATGA TTgacttttttttctgaaattttatcaaaaaatataattctttaTGTTAA TTAATTATAAAGCATCTATCTTAAAATAAGGGCAGCATTCGCTTTCCTGT TTTATCATGCGCTTtatagaaaagaagaaaaaaaatcagttgtTGGcctt caattttaaaataaagacAGGGGTCAGTCATTTTCTTCgttgtgaaattt cttcactgtCATGTTAGAAAAATAATCGTCTTAAAAAGGTTCAATGCTCT CATGATCGAACATagcgaagaaaaaacaacaatgtgaaaatttttcaaat tttaatgaaaCATAGAGCCCGCGAACTTAAGACTTGAAAAAGGTTTTCTA GGATATCCTGACTTTTTTCTCTAATATGTCATTTCACATCATTTTTCGAC TTCTATGTGTGTCTATCGCCtgtttgtttgtgtttttctgtgaactgata tttttcttttactgTAAAGACAAGAGAGTCATTTTTCACTTCATATTCAA ACaaaatactcctttttttgttttgttttcttttcgtaACTAAATAAGAT GGTACTGGTTTTTTGTTTATACAAGGAAAAGGACATCTTTTGAATGACTT TTTCCTGCCAGATCTTGACGAATTTGGATAAATCTGATTAATTTTCCTCG TTTTTTCTTCACGTCGACAtacgaaatgaaaaatacagACTCTCTATCCT GGCTATCCCATTTAAGTCTCTTCCGCGatcaaattcaatttaaaaagata aaagagaaaAGGGAGAGACAAAAAAACACACAGACAAAGGGAAATTTCAT TGCTTTTTTTCCATTAAATCCCCACTTGATCTTTTTGATTGATCAATGGT TGAAATAATCACACCCCCtaatcaaaaatttatgaaaatcatGTAACTTT TACATTTCTTACATAAAAAAGGAACAATGGctgtattttatttattgtcC AATATCTTGTTATTTGGAGCAAAttgttttcgatttttgatcgataaaac aaataaaagtgTTTTTCCCTTTCTCTCTCTCAATGTCGTTGAAAAATAAT TACCCTTGAAATTTACAAGGGGCGATTAATCTTCAATTAAAAAATTCGAC TGAATTCGATGGAAAAAGCAATCTTGTTAGTCAATCAAAGAAAACCCCTT CTTCGCTCgaagtttttcaattaaaaaaaaagaggcAATGAAATGACTCA AAATCAAAAGACAGCATCTCCTAAATTAGATTTAAAtctatttcttttga aaaaaggactcggaaaaagaaaagaatttgaaCATCAGCATAATAAAGTT TTTGTGAAGGTATACCGCATTGCTTATCTCTGTAAAGAGAAAAGctcatt ttctttttatgaGGTTTCAGTACTAACCTTATCACTACAAAGATGAGTTT TATAAAGTCTTTATGAGTGTTTTCTCTCGCGAAAAGCAAAATAAATGGGT TTAAATCGCATATTGACGACACCTTATCTTTCCCATTGTCACACAGAAAA ATGAAGTGATTATAAGCAGAAAAGACCTCTATTTTTTAATTCCACTggct tttcaattttctttactttacacatttttttattttctgtttctCTAATT CTTATATGTCAGCAATTTTAATTTGAAGTTTCTTTCtgtcaaacattttt ttataaatatcaaGATTATGTTATTCTTGATTTCAAAATACCTCTTAACA AAGATCTTGACCGCAGAAAATATCAACTCAGGCCCAGCCCTCTTCATGTT tcatctttcttttcaaagcaTCAATTTTCtctcttattttttgtcatgtC GCAActaatttgttttcatttcgcACCCTAAAATCTGTCATATGCTTCTT GACAAGAAGAGCAaaggaaaggcttgaaaattatacGCACAAGCCTCCCT AGGCCTTGTTTGAAACTAATTTGGATGTTAATTACCCCCGTGATGATTTA AACATTAATTAGATGGCTCTTTTCGTGTATTGCGCAATATAAACGTAATT AAAGATTTTagcttttgaatgaaaaaatccgGGCCTTGGGTACTtgggtt taaagtttaaaatgttGATTTTAGTTGCCAAGGGAGAGTAGACGGAGGTC ggtatttttatccatttttcaCGTCATTATCAAAAgttctctttaaagga gagagAAGAAACCCTGTTCCATTTCATTTGTTTGTGTGTTCGTCATATAT GAGTAGTATGTAGGATGGAAAAATATCTCCTTTTTTCGTAGCCGttgttt tataaataaaatgtaaaaggaaaacaaatagTGAATCGGAAGCGAGAATT TCACATGTATTGTTTTCATTATTGAAGTGGTATTTCGTTACCTATACACC TTATTTCCTCTGCtgttttatttagttttgaCTTTTCATTGTCCTCTTGT TAATCCAATCTTTTACTTAAACTGTCCTTTTCTTTTGTCAACATATTGAA AATATCTAGTAATCTGTGCAACATTAAATCAAGAAATCCTTAATCGCATT ACTGTTTTGTTTCGTCTATTTCTTCTCATCTCTAATTATTTCATGTGAAT GaagattgaatttaaattttctctttATAAAGGCCCTATAAGGTGCATTA TAAATCGGACAGAAAAAAGATGCCTCCATTTTGTTGCCATGCGTCAAACT TTTGTTTCGGAGTATTAAAAATAGGCATTTTGTACTAAATACCCACCCTC CTATCTTACTCAAAAGTATCGACAGCTTTCATTTTCAGcaccaaaatcga aaaaatcgaaattttggaACAGAAAGGACcaaaaaatacatgaaaatgtG GCCTAAATTTTCGGTTCTTCTATGTTCTTAAAAAGATAACTCCTCCAAAA TGCAACTCCTTTGGTTACGCGTCGAATGTAGTTTACAGCAAACATTATCT GTGTACCCCTCTACTTACAATAACTATAACAGACATTTTTCATTCGATTC CTTCAACAGGACGGACAAAAACAATTTGAAGTGGAATGGCAAAACACATG GGAAACTGAAGAAGCTCTCAAAGCATTAGCTCAATCATCAGAACTGATCG AAAAATTCCTCAAGGGGCAATGCGAAGAAAACAATAATTCGATCATCGAA CCCAATGAGGAACCGATAGCACAAACGAATATCGCCGATGACAATAAAAC GAAAGATGTCTCGCTAACGCCGACAAAAACCGACAGTGAATCGACGACGA CGAATTCAATCGCCGATGACGATGACGAAGAAGATGGTTTGCAGATCGAT GAGGTTCGTTATTTGATTGCTAAGGTTGGCATGCCCTCTTACTTCCTATT ATGGtatttaaaattattctaaTAATGTCTCAAAAATGCGAAAATGAATT TAGTCTTTAGTTTGCTTACTTGCCTGAATTAATTAGCATCCCTTTTAGTA CTCGCTACGAAAGTGTATCTCGCGTTAAACGTAGCGTAGTAGTATTTCTA CAGACATTTTCAACGCTTTTGGGCCTTTGGTGCGGAACTCAAATTGAATT TTAGCAACCATCGAAACGGGAGTTATAGTTTTGTACATCGTAACTAATTA ACTTTCAATAACTTTTGCTACCCCAGCAGTCAATGGAAATTGAAGAAACA GCAAAGGAGCCAGCACTCTCTGATCTTTTTTCCTCTCCTCCGAACAAGAA AGCTGCTGGGAAGAAAGGCATCAATGCTATCATCTCAAGATTacaaaaaa cacaacaaaaaggTTCGCTAGCCATTCTCACACAAATTTGAAGTTAAATT TTTGGGTAGTCCAATTTATAGTATTGAAGAACTGGTTAAGATTTTAGTGC TCCCAATTAAAACTAGGCTTTAATCCCGGTTGCTTGAACAGCTTCGATGG GTTTTACAAGTTTGGAGAAATATAgtttataatatataatataaaggGTT TatggttggaaattttgggtgttttggGTATTTTTACCAGGAAGGGTTGA AGTAAAAGCTAAAAAGTCCTAAGAACAACTTTAAGAAGGACGGCCTATTC AGGTCTGTAAAACAAGGAAAAGATATCAATACACAAGCTGCCCAATTATG tccgaaatgaaaaagaaaagagtaATTATGTTTGGcgttttttgtttgat tgtttgtttGATTGCTATCTTGCGGGTTTCTTCGCTAATCACTTCAACAT AATaggattttgaaaatgatggatAACGAGTTTAGTCTTAAAATATCTTC TCtaaatctattgttttcaattctTTAATTTTCCCATTATCCTCTAGAAG TCATTTTTAAAGTTACTGATTTAATGACCCATTTATGGTCTGCCTCCGTT TAAATTAATGACATTCTTTTTACATGcttttctaaaattgaaaaacgaag ataaCCTTCCCCCTTTCTTTCTCCTTCTTTCTTGATATGGATTGTGATAA GGTAATTATTGAAATCTTGAAGAGCTTCTAGCACTGACTGATTCCTAGAT TATATCTGTATATcccgacatttttttctgaGAAACAAAACAATCAATAA ACGAGGTTGAAAACCCCCTCACTCATTTTTTCTAGGACTCAAACCAACAG ACTTGCCACCAATCAGCAATGGCAGTACAGATCTTTCTTCAGACTATGTG GCTAAAACGCCTCTGTCACCAACCGCTGCCTGCGAAGCTCCCGAAGGAAT GCTACCTACATCCAACGCTACTTCACAACTGCAATCCGCCACACGATCTG ACAGTAGAACTCATTCTCAATCATCGTCACCTGCTCCGCCAATGGCCGCC ACATCCGCCCTATCGATCGATTTGAACGCAGGAGGACACCCATTGAAAAC AACGCAGAGCTACGAACTCATTCAAAGGTACATCTTCAATTCTCCTGGAA GTCCAcgtttcttcttttgtttttttttcattgaatcaCCCTAAACATAT CTGGCGTGTCAGGTTTATGACTGAATCGGATTGATTGATATGATCAGTAT TCTTAAGGATTCAATTGTACCATTGTAAACATGTACCAGACAGACAGGGC AGTCCCTGGTATAAAAGCATCGCTCGGTTGGCTAGGATAGACTAGGATTT AAACCATACATCTCAATGATGTGGTTTACTTTTTAGATTACCTTCGGGTG TCACGACCGTCGTGCGAAATTTGCCGCCCGGTACTGTATTCTACGAACCC GGGCAAATGCGGACTGGTGTTCCTCCATCGACATCCGGGCAACCCACAAT ACTCCAGCACTTTCACCAACCAAACACTGGCGCATCTGTACTACTCAAAT GTAGCATCTGTTCGGAAGTGTTCAGTGACGAAGCGAAATTCCGCACTCAC GCCTTCATGCATGAGCAAGTCTCCCTACTCAAGAACGACCCTCCAAAAAT GATGAAACCTGGAACGTACGAATGTAAATTCTGTCACGCCATCTTTGACG ATAAAGAGAGACTGAAGCAACATTATATAGAAAAACACGAGAAAGAGCAC GCCCTCATTCAACCGGCTGATCAGCTCTTCCAGTGCACTTTCTGTGACTT GAAGTTTCTGCATTATAACGCACTCGTACAACATCAGCAAACACATTCGC AGAGAAAAGAAGTTTATATTCTTCCCAAACAACAGCTTCAAGGTATGTAT TATGCTTTCACCAAGGGCTTTTTGTTACCTACCTTTCCTTTGAACACATT TGCCACGTTTCTGGGTTAAGGTATAAAGCGTACTGCAGGTAGAAAGGAAT AATTACTTCGTTAAAAGTACAGTAAGTAATGAAGATTTCTATGTGAAAGT ATATCGCGACTAAGCTATCAAAGTGTCTCTGTTAAGTATTCCGTAaggat ttttaaatttaatccATTTTTTCTTTCGTAGGAGGACAACTGATGACGGC AGACGGCAAACCTGTTCTCTTGGACCCAACCGTCATCCCCGTTGACTCCA CCCTACTTCACGAGAAAGTCAACGCATCAATGAACGAATCGATCCGCATG AAGAAAGAACAACATGATTCGGTTAAAAGTGAAGACATAGGAACTCCTCC TCCATCGACATCCATGACCACTCTGGACTTCCAACCAGTCAACGAGGCTC TACACAACAAGGCCAGCACCAGTAGTGTCAGCGGTGAACGCAAAATGTTC CGTTGTAACATTTGTGACGAGCTGTTCGAAACCGAAGACGCACGTGCTAA ACATTCACTCGTCCACGTCAATCGATCCTCGTCCCTCGATTGTCACATCT GTGGTAAACAGTTCCGACATCGCACCAATCTTTCCACACACATGATCGTT CATTCAGGCATCAAACCACACCAGTGCCATATCTGTCTTCGCCGCTTCAC ACAGAAAGTCAACCTTCAACGACACATGCATATCCACGATGGATCACGAC CGTTCACATGTCGAATGTGTCAAAAATCGTTCACACAGAAAGCCAACCTA CAACGCCATATTTTATCACACACGGAATACAGCAAGGAAGATGTACTACA AGCACTCAACGAAATCCCAAACGAATCTGAAGTCAATAACGCTATCAATG AGAGTTTGACCGAAGCCATGTCTGTAGTGATGGGCGACAAAAAATCTATA GGCGGATCCACCTCGGCGCCCAATACGCCAATTTCACAATCAGCAGACAA AGCTGACCTTCAGTGCGATGTTTGCGAGAAGTCATTCACAAATAAACTGA ATCTCCAGAAACACATGCTCTCGCATACAGACTCGAAACCATATCAATGT TTTGTCTGCGGTAAAGCGTTCCGTTTACGTTTGTCGTTGCAAAAACATTA CGCCGTGCATACAAACCATACCACGTCATTTACGTGTACAACCTGTCAAC GTTCATTCCTCTCTAAAACCAACCTCCAACGTCACATGTTGATTCATATC ACGGCCACCAACCAATGCTACCTTTGCGATCGATCCTTCACAGAAACGGA CAGCCTGGAACGTCACTTTGCTGAACATGTGGACGAAACGATGCCTGGTG TTTCTCTACCACAACGATACTTCGAACAATCGAAGCCAGGGCACAACTAC AGATGCGCAACTTGCGATATCATCTTCGAATCACCAATGATCTTCAGCCA GCATCTTCAATGTCATAAACGTAGCTTAAATTCAGATTCCAATCTCCTAG ACATCGGTGACCCTGACAAAGCATACGAAGAGAACCAAGCGTGTCCTCTC CAATGCAACTCGTGTGACCTCGTTTTCATGTCCGTTGCTAAGCTCGAATC ACACATGGCAACGCATTCGATGGATGAGAAGGAGAGTTCTTCCCTGGAAA GCATCACTGAAGCAACTGTTAAACCTTCCAACCCAATCCCTTTGACTTCA GAAGAGATCATGATCACCGAGACGAGCAACAACGGCAGTATGGCTTCTAC CAGCGATATCGGTAAAAGCATCAAATCAGAACCTGTCTCGCCAGCAGCTA GTCCGTCCTCTTATCGACTTTCCAGATGTCCAGTCTGCAAAGACATGTTT CATTCAAAAGAAGAAATGCAACGACATTATTCGTCTGCTCATTTGAAATC AGACTCTGCGTTACCCGACGACGGAATGGAAGTCGACATCATGGAGGAAG ATAACGTCTTTGAGGACGACGACGACGGGGCAATAGATGACGAACAGTTG GACGAGGTGCTTGATGGAAACTCGCAAATTCCCGCTTCTGCTTTGGTCAG CGAAAATGAAGAACGGTTGATTCGTGAGAATGAAGAATTCATCAAAGACA ATATCCTTGGTGGACCGGCCGAATACGAATCGAAAGGCCGATACGAACGT GGTAACTACAGTTGCAAGATCTGCAATCGTGTGTTGACCTATAAGTACAG CTTGGAAAAACACATGCTTCTTCACACTGGCAGTTTCCCGTACAAATGTC AACTGTGCTCCAAAAGGTtcgttttttatctttcttggTATtagaaattt tggaatttcttcCATTTCTTCAAGGGTTAGTTGCCCAACCTGCTCTTTAC TAACTTACACCAATTGATTCAGAATGACTTTTTATTACTAAGGTTTTCCA TAAAAAAGAGCTGTATTGTCTTTGATTTTCCGTCTTTCTAGTTTTTAATA TGCTCAACATTTTACCTAATGGCTACATCCCTGTATCGCGTTATATTTCT TCACATTATTTTCCGATGGACCTTGATGTATATGAGTTAATTTTCATCAA TCAAACTTCGATGTTTTTCTTCCATAGGTTTAACCACAAAGCCAACTTGG ACAAACACTTGGTTGTGCACAGCGGTGAGAAACCGTACGTCTGTCATATC TGCTCGCGACCTTTCAGTCAAAAATCCAACCTGCAACGTCATCAACTCAC GCACACGCAAAACCGTGACTTCGTTTGTGACGTTTGCGGGAAACGTTTCA ACCACATGGCTTCATTGAAAACACATTCACTCATCCATACTGGTGCCAAA CCGTTCGCTTGTTACGTCTGCCATAAACGCTTCAACCAGAAAGGTAACCT CAAACGACACATCCAAACCCATCGTACCGGAAAACGTGGAAAGATTCGAA GCGATAGTTTATCGAGTGGCGAAGGTAGTTATCGGATGGAAAACGATCGA TTAGACACGATGAGTTACGAACCGTCCGATGACGAGACTTACGAACCGAT AGTGATCCCGATGCCTGCGACCATCAAACCATTCCCGAATATCGAATCAC CGACACGACAATCGGAGCGTGTTCGTATCAAGAAGCAAGAGGTGGAAGAA GAATACGATTTTTATGACGATATGGAAGAGCCTCTCCCGACTATGATCGG TGGTGGAGCCGAAACCCCACCGAAAGCACCCTCGCCTGTGCCGAACATCA ACGTAACTACTTATCACGAACTCCGACCAAAAGATGAGATTGTAACTGTC ATGCCTTCGGACGCGTTGGAGAACAACAATACAACGGAAATGAACCGAGA ACCGACGAAACCTTTAAACAAAAACGACAATTTCCATTGTGATACGTGCT CTAAACTCTTCGTATCGATGGCTAGTCTTGATGCGCACAAGAAGAGCGCA CACAGTTCGATTGTTTGCGAAACCTGCGGCAAACATTTCTCACAAAAAGC TAATCTTTTGAAACATAAACTTATTCATTTAAACAGGAAACCATTTGTTT GTAAAGTTTGCAACAAAGCCTTCCGACAGAAAGCAAATCTTCAACGTCAC GAACTGATCCACAGCAAAGACCGGAAGACCGTCAACTGTCCCGAATGCAA CAAATCTTTCCGTTGCTCGTGGTCGCTCAAACAGCACATGAAAAATCACG CTATGAACTCAGGAATCCCATTAGCCCCCGGAAACCCTGTTGCAACAACC ACCACACTCGGTCCGGATAACTTCTTATACGGATGTTCTGTATGTGGAAA AACCTTTAAAGATAAAGATCAGCTACAAATTCATTTCAGTGTTCATCAAG CGCCCAGTGCTTTCGGATGTGGTATTTGCAATCAAATCTACCCAACCAAA GATGAACTTATTGATCATATGCGGCAACACGATGCCACACATATGGTCCC CCACGAGGGCCCCATTCATGTCCCACTTAAAACATAAGGTCCTGTTGGTG GGAGACCTGTAATATTTTGAACACTTTTCGTATAGAACGTTTTACTGATG TCTTTTTTATTGATAgactttgttgtaattttgtaaatatttcttacATA TGACGTTTTTCACCTTATGCTCGTGTCCGAATTGCacaattttttatcac attTATATAACTTTTTTCGGACGCTTAAGGTTTTTGCTACATTTTCCTGA CAATTTTATAAGATATTTTCACGTTCATcgcctttttaaaattatttttc taatgtACCTTTTCGTACTAGTAACGTGAAAGTTTTTTGCATGATAGCTT TAGTatataaaaatgataaatttctaTTGATAGTATATTTTTCAGAGTTT GTAAATTTTTCTGCcattttttggatttatatAAATAGTTTTAGATGATC AAAATATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041823XLOC_041823Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066891-exon-scaffold_462-1491911889:562334..562891TCONS_00066891-exon-scaffold_462-1491911889:562334..562891Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1510915933:562334..562891TCONS_00066891-exon-scaffold_462-1510915933:562334..562891Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1575043694:562334..562891TCONS_00066891-exon-scaffold_462-1575043694:562334..562891Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1491911889:566543..566836TCONS_00066891-exon-scaffold_462-1491911889:566543..566836Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1510915933:566543..566836TCONS_00066891-exon-scaffold_462-1510915933:566543..566836Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1575043694:566543..566836TCONS_00066891-exon-scaffold_462-1575043694:566543..566836Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1491911889:567163..567295TCONS_00066891-exon-scaffold_462-1491911889:567163..567295Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1510915933:567163..567295TCONS_00066891-exon-scaffold_462-1510915933:567163..567295Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1575043694:567163..567295TCONS_00066891-exon-scaffold_462-1575043694:567163..567295Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1491911889:568119..568410TCONS_00066891-exon-scaffold_462-1491911889:568119..568410Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1510915933:568119..568410TCONS_00066891-exon-scaffold_462-1510915933:568119..568410Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1575043694:568119..568410TCONS_00066891-exon-scaffold_462-1575043694:568119..568410Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1491911889:568670..569175TCONS_00066891-exon-scaffold_462-1491911889:568670..569175Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1510915933:568670..569175TCONS_00066891-exon-scaffold_462-1510915933:568670..569175Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1575043694:568670..569175TCONS_00066891-exon-scaffold_462-1575043694:568670..569175Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1491911889:569415..571449TCONS_00066891-exon-scaffold_462-1491911889:569415..571449Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1510915933:569415..571449TCONS_00066891-exon-scaffold_462-1510915933:569415..571449Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1575043694:569415..571449TCONS_00066891-exon-scaffold_462-1575043694:569415..571449Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1491911889:571761..573543TCONS_00066891-exon-scaffold_462-1491911889:571761..573543Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1510915933:571761..573543TCONS_00066891-exon-scaffold_462-1510915933:571761..573543Clytia hemisphaericaexon
TCONS_00066891-exon-scaffold_462-1575043694:571761..573543TCONS_00066891-exon-scaffold_462-1575043694:571761..573543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:562334..573543 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (0.00718961 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00718961 0.00405968 8.89024e-11 6.26034e-07 1.1647e-07 1.49504e-07 4.77263e-09 1.30475e-08 0 1.99507e-09 1.74688e-09 8.20512e-06 0 0 0 0 7.90656e-09 0 0 0 0.00011427 0.00468197 0.00234619 1.48115e-05 0 9.21096e-08 1.33886e-06 8.13666e-06 0.000296196 0.000283967
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066891 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
5001000150020002500300035004000450050005500Expect = 2.44e-32 / Id = 28.25Expect = 2.65e-28 / Id = 28.25Expect = 1.75e-30 / Id = 28.25Expect = 9.87e-24 / Id = 28.25Expect = 7.61e-27 / Id = 28.25Expect = 1.98e-47 / Id = 28.25Expect = 9.81e-27 / Id = 28.25Expect = 3.84e-26 / Id = 28.25Expect = 7.07e-26 / Id = 28.25Expect = 1.19e-25 / Id = 28.25Expect = 1.66e-25 / Id = 28.25Expect = 2.09e-25 / Id = 28.25Expect = 2.86e-25 / Id = 28.25Expect = 3.91e-25 / Id = 28.25Expect = 3.28e-24 / Id = 28.25Expect = 6.98e-23 / Id = 28.25Expect = 9.15e-23 / Id = 28.25Expect = 6.04e-21 / Id = 28.25Expect = 1.07e-21 / Id = 28.25Expect = 1.15e-21 / Id = 28.25Expect = 1.37e-16 / Id = 28.25Expect = 1.69e-19 / Id = 28.25Expect = 5.94e-21 / Id = 28.25Expect = 2.73e-20 / Id = 28.25Expect = 2.50e-19 / Id = 28.25Expect = 1.55e-16 / Id = 28.25SequenceZNF91
Match NameE-valueIdentityDescription
ZNF911.977e-4728.25Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE... [more]
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