TCONS_00066889 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066889
Unique NameTCONS_00066889
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5565

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066889 ID=TCONS_00066889|Name=TCONS_00066889|organism=Clytia hemisphaerica|type=transcript|length=5565bp
AAAGTCGGTTGActgttgttttctttttacaaataaaaaaaaatcaagac
aaaaaatcacattccattgtattgacaattaaatctggtctgtaaaatta
aTTACGGATATTGAAAATTGTTGAAGCGAGGAAAAGAATCAATGTTCTTC
ATAAGTCAATTTAGTGTGTGTGAtcataaaagagaaaaagacaTTGCGCT
GCAAACACATGATTTATGCACTGCGTGTGTAGCAGAGAAAGAGAGAGTGC
ACAAgtgaagtttttcatttttcacgtATGCAAAGACGAATGTGAGTTTT
GTGtaacaaaaaatgaagatgataTTGATTTAAATAGACTTCCAGTTGAG
TTGATTAAACGCTGTTCGATCAATAAAGATTACTTTTGACCTTCTTTGCA
CAAAAGTACCTGGTAGAGCTTTCATGATCTTTTATTTCACGTGCTTCAAA
TTTTTGGTgtacgaaaaatattttcagttgttcTTGAAACACGCTTGAAG
AAAGATGGCTGCAGAAATTTCCAAACGAGTAATCAAGAAAATTGTCAATG
TTAAGGAAACAGAGGACGGACAAAAACAATTTGAAGTGGAATGGCAAAAC
ACATGGGAAACTGAAGAAGCTCTCAAAGCATTAGCTCAATCATCAGAACT
GATCGAAAAATTCCTCAAGGGGCAATGCGAAGAAAACAATAATTCGATCA
TCGAACCCAATGAGGAACCGATAGCACAAACGAATATCGCCGATGACAAT
AAAACGAAAGATGTCTCGCTAACGCCGACAAAAACCGACAGTGAATCGAC
GACGACGAATTCAATCGCCGATGACGATGACGAAGAAGATGGTTTGCAGA
TCGATGAGCAGTCAATGGAAATTGAAGAAACAGCAAAGGAGCCAGCACTC
TCTGATCTTTTTTCCTCTCCTCCGAACAAGAAAGCTGCTGGGAAGAAAGG
CATCAATGCTATCATCTCAAGATTacaaaaaacacaacaaaaagATCTTT
CTTCAGACTATGTGGCTAAAACGCCTCTGTCACCAACCGCTGCCTGCGAA
GCTCCCGAAGGAATGCTACCTACATCCAACGCTACTTCACAACTGCAATC
CGCCACACGATCTGACAGTAGAACTCATTCTCAATCATCGTCACCTGCTC
CGCCAATGGCCGCCACATCCGCCCTATCGATCGATTTGAACGCAGGAGGA
CACCCATTGAAAACAACGCAGAGCTACGAACTCATTCAAAGATTACCTTC
GGGTGTCACGACCGTCGTGCGAAATTTGCCGCCCGGTACTGTATTCTACG
AACCCGGGCAAATGCGGACTGGTGTTCCTCCATCGACATCCGGGCAACCC
ACAATACTCCAGCACTTTCACCAACCAAACACTGGCGCATCTGTACTACT
CAAATGTAGCATCTGTTCGGAAGTGTTCAGTGACGAAGCGAAATTCCGCA
CTCACGCCTTCATGCATGAGCAAGTCTCCCTACTCAAGAACGACCCTCCA
AAAATGATGAAACCTGGAACGTACGAATGTAAATTCTGTCACGCCATCTT
TGACGATAAAGAGAGACTGAAGCAACATTATATAGAAAAACACGAGAAAG
AGCACGCCCTCATTCAACCGGCTGATCAGCTCTTCCAGTGCACTTTCTGT
GACTTGAAGTTTCTGCATTATAACGCACTCGTACAACATCAGCAAACACA
TTCGCAGAGAAAAGAAGTTTATATTCTTCCCAAACAACAGCTTCAAGGAG
GACAACTGATGACGGCAGACGGCAAACCTGTTCTCTTGGACCCAACCGTC
ATCCCCGTTGACTCCACCCTACTTCACGAGAAAGTCAACGCATCAATGAA
CGAATCGATCCGCATGAAGAAAGAACAACATGATTCGGTTAAAAGTGAAG
ACATAGGAACTCCTCCTCCATCGACATCCATGACCACTCTGGACTTCCAA
CCAGTCAACGAGGCTCTACACAACAAGGCCAGCACCAGTAGTGTCAGCGG
TGAACGCAAAATGTTCCGTTGTAACATTTGTGACGAGCTGTTCGAAACCG
AAGACGCACGTGCTAAACATTCACTCGTCCACGTCAATCGATCCTCGTCC
CTCGATTGTCACATCTGTGGTAAACAGTTCCGACATCGCACCAATCTTTC
CACACACATGATCGTTCATTCAGGCATCAAACCACACCAGTGCCATATCT
GTCTTCGCCGCTTCACACAGAAAGTCAACCTTCAACGACACATGCATATC
CACGATGGATCACGACCGTTCACATGTCGAATGTGTCAAAAATCGTTCAC
ACAGAAAGCCAACCTACAACGCCATATTTTATCACACACGGAATACAGCA
AGGAAGATGTACTACAAGCACTCAACGAAATCCCAAACGAATCTGAAGTC
AATAACGCTATCAATGAGAGTTTGACCGAAGCCATGTCTGTAGTGATGGG
CGACAAAAAATCTATAGGCGGATCCACCTCGGCGCCCAATACGCCAATTT
CACAATCAGCAGACAAAGCTGACCTTCAGTGCGATGTTTGCGAGAAGTCA
TTCACAAATAAACTGAATCTCCAGAAACACATGCTCTCGCATACAGACTC
GAAACCATATCAATGTTTTGTCTGCGGTAAAGCGTTCCGTTTACGTTTGT
CGTTGCAAAAACATTACGCCGTGCATACAAACCATACCACGTCATTTACG
TGTACAACCTGTCAACGTTCATTCCTCTCTAAAACCAACCTCCAACGTCA
CATGTTGATTCATATCACGGCCACCAACCAATGCTACCTTTGCGATCGAT
CCTTCACAGAAACGGACAGCCTGGAACGTCACTTTGCTGAACATGTGGAC
GAAACGATGCCTGGTGTTTCTCTACCACAACGATACTTCGAACAATCGAA
GCCAGGGCACAACTACAGATGCGCAACTTGCGATATCATCTTCGAATCAC
CAATGATCTTCAGCCAGCATCTTCAATGTCATAAACGTAGCTTAAATTCA
GATTCCAATCTCCTAGACATCGGTGACCCTGACAAAGCATACGAAGAGAA
CCAAGCGTGTCCTCTCCAATGCAACTCGTGTGACCTCGTTTTCATGTCCG
TTGCTAAGCTCGAATCACACATGGCAACGCATTCGATGGATGAGAAGGAG
AGTTCTTCCCTGGAAAGCATCACTGAAGCAACTGTTAAACCTTCCAACCC
AATCCCTTTGACTTCAGAAGAGATCATGATCACCGAGACGAGCAACAACG
GCAGTATGGCTTCTACCAGCGATATCGGTAAAAGCATCAAATCAGAACCT
GTCTCGCCAGCAGCTAGTCCGTCCTCTTATCGACTTTCCAGATGTCCAGT
CTGCAAAGACATGTTTCATTCAAAAGAAGAAATGCAACGACATTATTCGT
CTGCTCATTTGAAATCAGACTCTGCGTTACCCGACGACGGAATGGAAGTC
GACATCATGGAGGAAGATAACGTCTTTGAGGACGACGACGACGGGGCAAT
AGATGACGAACAGTTGGACGAGGTGCTTGATGGAAACTCGCAAATTCCCG
CTTCTGCTTTGGTCAGCGAAAATGAAGAACGGTTGATTCGTGAGAATGAA
GAATTCATCAAAGACAATATCCTTGGTGGACCGGCCGAATACGAATCGAA
AGGCCGATACGAACGTGGTAACTACAGTTGCAAGATCTGCAATCGTGTGT
TGACCTATAAGTACAGCTTGGAAAAACACATGCTTCTTCACACTGGCAGT
TTCCCGTACAAATGTCAACTGTGCTCCAAAAGGTTTAACCACAAAGCCAA
CTTGGACAAACACTTGGTTGTGCACAGCGGTGAGAAACCGTACGTCTGTC
ATATCTGCTCGCGACCTTTCAGTCAAAAATCCAACCTGCAACGTCATCAA
CTCACGCACACGCAAAACCGTGACTTCGTTTGTGACGTTTGCGGGAAACG
TTTCAACCACATGGCTTCATTGAAAACACATTCACTCATCCATACTGGTG
CCAAACCGTTCGCTTGTTACGTCTGCCATAAACGCTTCAACCAGAAAGGT
AACCTCAAACGACACATCCAAACCCATCGTACCGGAAAACGTGGAAAGAT
TCGAAGCGATAGTTTATCGAGTGGCGAAGGTAGTTATCGGATGGAAAACG
ATCGATTAGACACGATGAGTTACGAACCGTCCGATGACGAGACTTACGAA
CCGATAGTGATCCCGATGCCTGCGACCATCAAACCATTCCCGAATATCGA
ATCACCGACACGACAATCGGAGCGTGTTCGTATCAAGAAGCAAGAGGTGG
AAGAAGAATACGATTTTTATGACGATATGGAAGAGCCTCTCCCGACTATG
ATCGGTGGTGGAGCCGAAACCCCACCGAAAGCACCCTCGCCTGTGCCGAA
CATCAACGTAACTACTTATCACGAACTCCGACCAAAAGATGAGATTGTAA
CTGTCATGCCTTCGGACGCGTTGGAGAACAACAATACAACGGAAATGAAC
CGAGAACCGACGAAACCTTTAAACAAAAACGACAATTTCCATTGTGATAC
GTGCTCTAAACTCTTCGTATCGATGGCTAGTCTTGATGCGCACAAGAAGA
GCGCACACAGTTCGATTGTTTGCGAAACCTGCGGCAAACATTTCTCACAA
AAAGCTAATCTTTTGAAACATAAACTTATTCATTTAAACAGGAAACCATT
TGTTTGTAAAGTTTGCAACAAAGCCTTCCGACAGAAAGCAAATCTTCAAC
GTCACGAACTGATCCACAGCAAAGACCGGAAGACCGTCAACTGTCCCGAA
TGCAACAAATCTTTCCGTTGCTCGTGGTCGCTCAAACAGCACATGAAAAA
TCACGCTATGAACTCAGGAATCCCATTAGCCCCCGGAAACCCTGTTGCAA
CAACCACCACACTCGGTCCGGATAACTTCTTATACGGATGTTCTGTATGT
GGAAAAACCTTTAAAGATAAAGATCAGCTACAAATTCATTTCAGTGTTCA
TCAAGCGCCCAGTGCTTTCGGATGTGGTATTTGCAATCAAATCTACCCAA
CCAAAGATGAACTTATTGATCATATGCGGCAACACGATGCCACACATATG
GTCCCCCACGAGGGCCCCATTCATGTCCCACTTAAAACATAAGGTCCTGT
TGGTGGGAGACCTGTAATATTTTGAACACTTTTCGTATAGAACGTTTTAC
TGATGTCTTTTTTATTGATAgactttgttgtaattttgtaaatatttctt
acATATGACGTTTTTCACCTTATGCTCGTGTCCGAATTGCacaatttttt
atcacattTATATAACTTTTTTCGGACGCTTAAGGTTTTTGCTACATTTT
CCTGACAATTTTATAAGATATTTTCACGTTCATcgcctttttaaaattat
ttttctaatgtACCTTTTCGTACTAGTAACGTGAAAGTTTTTTGCATGAT
AGCTTTAGTatataaaaatgataaatttctaTTGATAGTATATTTTTCAG
AGTTTGTAAATTTTTCTGCcattttttggatttatatAAATAGTTTTAGA
TGATCAAAATATATT
Run BLAST on NCBI

transcript from alignment at scaffold_462:562328..573543+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066889 ID=TCONS_00066889|Name=TCONS_00066889|organism=Clytia hemisphaerica|type=transcript|length=11216bp|location=Sequence derived from alignment at scaffold_462:562328..573543+ (Clytia hemisphaerica)
AAAGTCGGTTGActgttgttttctttttacaaataaaaaaaaatcaagac aaaaaatcacattccattgtattgacaattaaatctggtctgtaaaatta aTTACGGATATTGAAAATTGTTGAAGCGAGGAAAAGAATCAATGTTCTTC ATAAGTCAATTTAGTGTGTGTGAtcataaaagagaaaaagacaTTGCGCT GCAAACACATGATTTATGCACTGCGTGTGTAGCAGAGAAAGAGAGAGTGC ACAAgtgaagtttttcatttttcacgtATGCAAAGACGAATGTGAGTTTT GTGtaacaaaaaatgaagatgataTTGATTTAAATAGACTTCCAGTTGAG TTGATTAAACGCTGTTCGATCAATAAAGATTACTTTTGACCTTCTTTGCA CAAAAGTACCTGGTAGAGCTTTCATGATCTTTTATTTCACGTGCTTCAAA TTTTTGGTgtacgaaaaatattttcagttgttcTTGAAACACGCTTGAAG AAAGATGGCTGCAGAAATTTCCAAACGAGTAATCAAGAAAATTGTCAATG TTAAGGAAACAGAGGTTTGTCGATTGCTCTTTTTTTTTGCATCTTCTTAT TtcttcactttcgttttcatttttcattttcattaaatattgAAAACTTT TCTCTTTGTCAGGTTTTTTCTGAGAAGTGTTTTTTATTATGGAAAGCTTT TTGAAACATCTGCCTTTCCTTTTGTGTATGGTGTCTTTTGATGAAAGAGG GAAATAtaaataatttgtaaatttttggaaGCTGGCCTGCAGAAGAGCTC CCGATGTATAGCTGATGCAGGATTTCTAGTTATCAAAATCTTTGGTTTGA GTCTACATTTTCTGACAAATCTCTAAccgatattttttctttctttctct ctCTTCAGAAGTAAAAAAATCCTTATGACACTGGGATGTAATGTAATTCC AAAGTTCTTCATGAGTTTTGTTTTCCCATAAAAATTGATGATAAAAAATG TCTTTATTTTCGACATCGATTTACTATAATAACATAATAAGTAACAGAGC ACCATCGTAGCGGCTCTTAATGACCTATAAACCTATCCATCTTGAAATTC AGGAGAAAAGCCACCACGGTGGAGTTTTATTGTCAAGAATGTCATTTTGA AATCAACAAGTTTTAAAGCAGCGAGGAAAAGCGATAAGCGAAATAAGAAA GACCCAGGGGGTACATCAACTCCCTTTTTGTAAGGAAATTAAAAAGACCT GCATGATTgacttttttttctgaaattttatcaaaaaatataattcttta TGTTAATTAATTATAAAGCATCTATCTTAAAATAAGGGCAGCATTCGCTT TCCTGTTTTATCATGCGCTTtatagaaaagaagaaaaaaaatcagttgtT GGccttcaattttaaaataaagacAGGGGTCAGTCATTTTCTTCgttgtg aaatttcttcactgtCATGTTAGAAAAATAATCGTCTTAAAAAGGTTCAA TGCTCTCATGATCGAACATagcgaagaaaaaacaacaatgtgaaaatttt tcaaattttaatgaaaCATAGAGCCCGCGAACTTAAGACTTGAAAAAGGT TTTCTAGGATATCCTGACTTTTTTCTCTAATATGTCATTTCACATCATTT TTCGACTTCTATGTGTGTCTATCGCCtgtttgtttgtgtttttctgtgaa ctgatatttttcttttactgTAAAGACAAGAGAGTCATTTTTCACTTCAT ATTCAAACaaaatactcctttttttgttttgttttcttttcgtaACTAAA TAAGATGGTACTGGTTTTTTGTTTATACAAGGAAAAGGACATCTTTTGAA TGACTTTTTCCTGCCAGATCTTGACGAATTTGGATAAATCTGATTAATTT TCCTCGTTTTTTCTTCACGTCGACAtacgaaatgaaaaatacagACTCTC TATCCTGGCTATCCCATTTAAGTCTCTTCCGCGatcaaattcaatttaaa aagataaaagagaaaAGGGAGAGACAAAAAAACACACAGACAAAGGGAAA TTTCATTGCTTTTTTTCCATTAAATCCCCACTTGATCTTTTTGATTGATC AATGGTTGAAATAATCACACCCCCtaatcaaaaatttatgaaaatcatGT AACTTTTACATTTCTTACATAAAAAAGGAACAATGGctgtattttattta ttgtcCAATATCTTGTTATTTGGAGCAAAttgttttcgatttttgatcga taaaacaaataaaagtgTTTTTCCCTTTCTCTCTCTCAATGTCGTTGAAA AATAATTACCCTTGAAATTTACAAGGGGCGATTAATCTTCAATTAAAAAA TTCGACTGAATTCGATGGAAAAAGCAATCTTGTTAGTCAATCAAAGAAAA CCCCTTCTTCGCTCgaagtttttcaattaaaaaaaaagaggcAATGAAAT GACTCAAAATCAAAAGACAGCATCTCCTAAATTAGATTTAAAtctatttc ttttgaaaaaaggactcggaaaaagaaaagaatttgaaCATCAGCATAAT AAAGTTTTTGTGAAGGTATACCGCATTGCTTATCTCTGTAAAGAGAAAAG ctcattttctttttatgaGGTTTCAGTACTAACCTTATCACTACAAAGAT GAGTTTTATAAAGTCTTTATGAGTGTTTTCTCTCGCGAAAAGCAAAATAA ATGGGTTTAAATCGCATATTGACGACACCTTATCTTTCCCATTGTCACAC AGAAAAATGAAGTGATTATAAGCAGAAAAGACCTCTATTTTTTAATTCCA CTggcttttcaattttctttactttacacatttttttattttctgtttct CTAATTCTTATATGTCAGCAATTTTAATTTGAAGTTTCTTTCtgtcaaac atttttttataaatatcaaGATTATGTTATTCTTGATTTCAAAATACCTC TTAACAAAGATCTTGACCGCAGAAAATATCAACTCAGGCCCAGCCCTCTT CATGTTtcatctttcttttcaaagcaTCAATTTTCtctcttattttttgt catgtCGCAActaatttgttttcatttcgcACCCTAAAATCTGTCATATG CTTCTTGACAAGAAGAGCAaaggaaaggcttgaaaattatacGCACAAGC CTCCCTAGGCCTTGTTTGAAACTAATTTGGATGTTAATTACCCCCGTGAT GATTTAAACATTAATTAGATGGCTCTTTTCGTGTATTGCGCAATATAAAC GTAATTAAAGATTTTagcttttgaatgaaaaaatccgGGCCTTGGGTACT tgggtttaaagtttaaaatgttGATTTTAGTTGCCAAGGGAGAGTAGACG GAGGTCggtatttttatccatttttcaCGTCATTATCAAAAgttctcttt aaaggagagagAAGAAACCCTGTTCCATTTCATTTGTTTGTGTGTTCGTC ATATATGAGTAGTATGTAGGATGGAAAAATATCTCCTTTTTTCGTAGCCG ttgttttataaataaaatgtaaaaggaaaacaaatagTGAATCGGAAGCG AGAATTTCACATGTATTGTTTTCATTATTGAAGTGGTATTTCGTTACCTA TACACCTTATTTCCTCTGCtgttttatttagttttgaCTTTTCATTGTCC TCTTGTTAATCCAATCTTTTACTTAAACTGTCCTTTTCTTTTGTCAACAT ATTGAAAATATCTAGTAATCTGTGCAACATTAAATCAAGAAATCCTTAAT CGCATTACTGTTTTGTTTCGTCTATTTCTTCTCATCTCTAATTATTTCAT GTGAATGaagattgaatttaaattttctctttATAAAGGCCCTATAAGGT GCATTATAAATCGGACAGAAAAAAGATGCCTCCATTTTGTTGCCATGCGT CAAACTTTTGTTTCGGAGTATTAAAAATAGGCATTTTGTACTAAATACCC ACCCTCCTATCTTACTCAAAAGTATCGACAGCTTTCATTTTCAGcaccaa aatcgaaaaaatcgaaattttggaACAGAAAGGACcaaaaaatacatgaa aatgtGGCCTAAATTTTCGGTTCTTCTATGTTCTTAAAAAGATAACTCCT CCAAAATGCAACTCCTTTGGTTACGCGTCGAATGTAGTTTACAGCAAACA TTATCTGTGTACCCCTCTACTTACAATAACTATAACAGACATTTTTCATT CGATTCCTTCAACAGGACGGACAAAAACAATTTGAAGTGGAATGGCAAAA CACATGGGAAACTGAAGAAGCTCTCAAAGCATTAGCTCAATCATCAGAAC TGATCGAAAAATTCCTCAAGGGGCAATGCGAAGAAAACAATAATTCGATC ATCGAACCCAATGAGGAACCGATAGCACAAACGAATATCGCCGATGACAA TAAAACGAAAGATGTCTCGCTAACGCCGACAAAAACCGACAGTGAATCGA CGACGACGAATTCAATCGCCGATGACGATGACGAAGAAGATGGTTTGCAG ATCGATGAGGTTCGTTATTTGATTGCTAAGGTTGGCATGCCCTCTTACTT CCTATTATGGtatttaaaattattctaaTAATGTCTCAAAAATGCGAAAA TGAATTTAGTCTTTAGTTTGCTTACTTGCCTGAATTAATTAGCATCCCTT TTAGTACTCGCTACGAAAGTGTATCTCGCGTTAAACGTAGCGTAGTAGTA TTTCTACAGACATTTTCAACGCTTTTGGGCCTTTGGTGCGGAACTCAAAT TGAATTTTAGCAACCATCGAAACGGGAGTTATAGTTTTGTACATCGTAAC TAATTAACTTTCAATAACTTTTGCTACCCCAGCAGTCAATGGAAATTGAA GAAACAGCAAAGGAGCCAGCACTCTCTGATCTTTTTTCCTCTCCTCCGAA CAAGAAAGCTGCTGGGAAGAAAGGCATCAATGCTATCATCTCAAGATTac aaaaaacacaacaaaaaggTTCGCTAGCCATTCTCACACAAATTTGAAGT TAAATTTTTGGGTAGTCCAATTTATAGTATTGAAGAACTGGTTAAGATTT TAGTGCTCCCAATTAAAACTAGGCTTTAATCCCGGTTGCTTGAACAGCTT CGATGGGTTTTACAAGTTTGGAGAAATATAgtttataatatataatataa aggGTTTatggttggaaattttgggtgttttggGTATTTTTACCAGGAAG GGTTGAAGTAAAAGCTAAAAAGTCCTAAGAACAACTTTAAGAAGGACGGC CTATTCAGGTCTGTAAAACAAGGAAAAGATATCAATACACAAGCTGCCCA ATTATGtccgaaatgaaaaagaaaagagtaATTATGTTTGGcgttttttg tttgattgtttgtttGATTGCTATCTTGCGGGTTTCTTCGCTAATCACTT CAACATAATaggattttgaaaatgatggatAACGAGTTTAGTCTTAAAAT ATCTTCTCtaaatctattgttttcaattctTTAATTTTCCCATTATCCTC TAGAAGTCATTTTTAAAGTTACTGATTTAATGACCCATTTATGGTCTGCC TCCGTTTAAATTAATGACATTCTTTTTACATGcttttctaaaattgaaaa acgaagataaCCTTCCCCCTTTCTTTCTCCTTCTTTCTTGATATGGATTG TGATAAGGTAATTATTGAAATCTTGAAGAGCTTCTAGCACTGACTGATTC CTAGATTATATCTGTATATcccgacatttttttctgaGAAACAAAACAAT CAATAAACGAGGTTGAAAACCCCCTCACTCATTTTTTCTAGGACTCAAAC CAACAGACTTGCCACCAATCAGCAATGGCAGTACAGATCTTTCTTCAGAC TATGTGGCTAAAACGCCTCTGTCACCAACCGCTGCCTGCGAAGCTCCCGA AGGAATGCTACCTACATCCAACGCTACTTCACAACTGCAATCCGCCACAC GATCTGACAGTAGAACTCATTCTCAATCATCGTCACCTGCTCCGCCAATG GCCGCCACATCCGCCCTATCGATCGATTTGAACGCAGGAGGACACCCATT GAAAACAACGCAGAGCTACGAACTCATTCAAAGGTACATCTTCAATTCTC CTGGAAGTCCAcgtttcttcttttgtttttttttcattgaatcaCCCTAA ACATATCTGGCGTGTCAGGTTTATGACTGAATCGGATTGATTGATATGAT CAGTATTCTTAAGGATTCAATTGTACCATTGTAAACATGTACCAGACAGA CAGGGCAGTCCCTGGTATAAAAGCATCGCTCGGTTGGCTAGGATAGACTA GGATTTAAACCATACATCTCAATGATGTGGTTTACTTTTTAGATTACCTT CGGGTGTCACGACCGTCGTGCGAAATTTGCCGCCCGGTACTGTATTCTAC GAACCCGGGCAAATGCGGACTGGTGTTCCTCCATCGACATCCGGGCAACC CACAATACTCCAGCACTTTCACCAACCAAACACTGGCGCATCTGTACTAC TCAAATGTAGCATCTGTTCGGAAGTGTTCAGTGACGAAGCGAAATTCCGC ACTCACGCCTTCATGCATGAGCAAGTCTCCCTACTCAAGAACGACCCTCC AAAAATGATGAAACCTGGAACGTACGAATGTAAATTCTGTCACGCCATCT TTGACGATAAAGAGAGACTGAAGCAACATTATATAGAAAAACACGAGAAA GAGCACGCCCTCATTCAACCGGCTGATCAGCTCTTCCAGTGCACTTTCTG TGACTTGAAGTTTCTGCATTATAACGCACTCGTACAACATCAGCAAACAC ATTCGCAGAGAAAAGAAGTTTATATTCTTCCCAAACAACAGCTTCAAGGT ATGTATTATGCTTTCACCAAGGGCTTTTTGTTACCTACCTTTCCTTTGAA CACATTTGCCACGTTTCTGGGTTAAGGTATAAAGCGTACTGCAGGTAGAA AGGAATAATTACTTCGTTAAAAGTACAGTAAGTAATGAAGATTTCTATGT GAAAGTATATCGCGACTAAGCTATCAAAGTGTCTCTGTTAAGTATTCCGT AaggatttttaaatttaatccATTTTTTCTTTCGTAGGAGGACAACTGAT GACGGCAGACGGCAAACCTGTTCTCTTGGACCCAACCGTCATCCCCGTTG ACTCCACCCTACTTCACGAGAAAGTCAACGCATCAATGAACGAATCGATC CGCATGAAGAAAGAACAACATGATTCGGTTAAAAGTGAAGACATAGGAAC TCCTCCTCCATCGACATCCATGACCACTCTGGACTTCCAACCAGTCAACG AGGCTCTACACAACAAGGCCAGCACCAGTAGTGTCAGCGGTGAACGCAAA ATGTTCCGTTGTAACATTTGTGACGAGCTGTTCGAAACCGAAGACGCACG TGCTAAACATTCACTCGTCCACGTCAATCGATCCTCGTCCCTCGATTGTC ACATCTGTGGTAAACAGTTCCGACATCGCACCAATCTTTCCACACACATG ATCGTTCATTCAGGCATCAAACCACACCAGTGCCATATCTGTCTTCGCCG CTTCACACAGAAAGTCAACCTTCAACGACACATGCATATCCACGATGGAT CACGACCGTTCACATGTCGAATGTGTCAAAAATCGTTCACACAGAAAGCC AACCTACAACGCCATATTTTATCACACACGGAATACAGCAAGGAAGATGT ACTACAAGCACTCAACGAAATCCCAAACGAATCTGAAGTCAATAACGCTA TCAATGAGAGTTTGACCGAAGCCATGTCTGTAGTGATGGGCGACAAAAAA TCTATAGGCGGATCCACCTCGGCGCCCAATACGCCAATTTCACAATCAGC AGACAAAGCTGACCTTCAGTGCGATGTTTGCGAGAAGTCATTCACAAATA AACTGAATCTCCAGAAACACATGCTCTCGCATACAGACTCGAAACCATAT CAATGTTTTGTCTGCGGTAAAGCGTTCCGTTTACGTTTGTCGTTGCAAAA ACATTACGCCGTGCATACAAACCATACCACGTCATTTACGTGTACAACCT GTCAACGTTCATTCCTCTCTAAAACCAACCTCCAACGTCACATGTTGATT CATATCACGGCCACCAACCAATGCTACCTTTGCGATCGATCCTTCACAGA AACGGACAGCCTGGAACGTCACTTTGCTGAACATGTGGACGAAACGATGC CTGGTGTTTCTCTACCACAACGATACTTCGAACAATCGAAGCCAGGGCAC AACTACAGATGCGCAACTTGCGATATCATCTTCGAATCACCAATGATCTT CAGCCAGCATCTTCAATGTCATAAACGTAGCTTAAATTCAGATTCCAATC TCCTAGACATCGGTGACCCTGACAAAGCATACGAAGAGAACCAAGCGTGT CCTCTCCAATGCAACTCGTGTGACCTCGTTTTCATGTCCGTTGCTAAGCT CGAATCACACATGGCAACGCATTCGATGGATGAGAAGGAGAGTTCTTCCC TGGAAAGCATCACTGAAGCAACTGTTAAACCTTCCAACCCAATCCCTTTG ACTTCAGAAGAGATCATGATCACCGAGACGAGCAACAACGGCAGTATGGC TTCTACCAGCGATATCGGTAAAAGCATCAAATCAGAACCTGTCTCGCCAG CAGCTAGTCCGTCCTCTTATCGACTTTCCAGATGTCCAGTCTGCAAAGAC ATGTTTCATTCAAAAGAAGAAATGCAACGACATTATTCGTCTGCTCATTT GAAATCAGACTCTGCGTTACCCGACGACGGAATGGAAGTCGACATCATGG AGGAAGATAACGTCTTTGAGGACGACGACGACGGGGCAATAGATGACGAA CAGTTGGACGAGGTGCTTGATGGAAACTCGCAAATTCCCGCTTCTGCTTT GGTCAGCGAAAATGAAGAACGGTTGATTCGTGAGAATGAAGAATTCATCA AAGACAATATCCTTGGTGGACCGGCCGAATACGAATCGAAAGGCCGATAC GAACGTGGTAACTACAGTTGCAAGATCTGCAATCGTGTGTTGACCTATAA GTACAGCTTGGAAAAACACATGCTTCTTCACACTGGCAGTTTCCCGTACA AATGTCAACTGTGCTCCAAAAGGTtcgttttttatctttcttggTATtag aaattttggaatttcttcCATTTCTTCAAGGGTTAGTTGCCCAACCTGCT CTTTACTAACTTACACCAATTGATTCAGAATGACTTTTTATTACTAAGGT TTTCCATAAAAAAGAGCTGTATTGTCTTTGATTTTCCGTCTTTCTAGTTT TTAATATGCTCAACATTTTACCTAATGGCTACATCCCTGTATCGCGTTAT ATTTCTTCACATTATTTTCCGATGGACCTTGATGTATATGAGTTAATTTT CATCAATCAAACTTCGATGTTTTTCTTCCATAGGTTTAACCACAAAGCCA ACTTGGACAAACACTTGGTTGTGCACAGCGGTGAGAAACCGTACGTCTGT CATATCTGCTCGCGACCTTTCAGTCAAAAATCCAACCTGCAACGTCATCA ACTCACGCACACGCAAAACCGTGACTTCGTTTGTGACGTTTGCGGGAAAC GTTTCAACCACATGGCTTCATTGAAAACACATTCACTCATCCATACTGGT GCCAAACCGTTCGCTTGTTACGTCTGCCATAAACGCTTCAACCAGAAAGG TAACCTCAAACGACACATCCAAACCCATCGTACCGGAAAACGTGGAAAGA TTCGAAGCGATAGTTTATCGAGTGGCGAAGGTAGTTATCGGATGGAAAAC GATCGATTAGACACGATGAGTTACGAACCGTCCGATGACGAGACTTACGA ACCGATAGTGATCCCGATGCCTGCGACCATCAAACCATTCCCGAATATCG AATCACCGACACGACAATCGGAGCGTGTTCGTATCAAGAAGCAAGAGGTG GAAGAAGAATACGATTTTTATGACGATATGGAAGAGCCTCTCCCGACTAT GATCGGTGGTGGAGCCGAAACCCCACCGAAAGCACCCTCGCCTGTGCCGA ACATCAACGTAACTACTTATCACGAACTCCGACCAAAAGATGAGATTGTA ACTGTCATGCCTTCGGACGCGTTGGAGAACAACAATACAACGGAAATGAA CCGAGAACCGACGAAACCTTTAAACAAAAACGACAATTTCCATTGTGATA CGTGCTCTAAACTCTTCGTATCGATGGCTAGTCTTGATGCGCACAAGAAG AGCGCACACAGTTCGATTGTTTGCGAAACCTGCGGCAAACATTTCTCACA AAAAGCTAATCTTTTGAAACATAAACTTATTCATTTAAACAGGAAACCAT TTGTTTGTAAAGTTTGCAACAAAGCCTTCCGACAGAAAGCAAATCTTCAA CGTCACGAACTGATCCACAGCAAAGACCGGAAGACCGTCAACTGTCCCGA ATGCAACAAATCTTTCCGTTGCTCGTGGTCGCTCAAACAGCACATGAAAA ATCACGCTATGAACTCAGGAATCCCATTAGCCCCCGGAAACCCTGTTGCA ACAACCACCACACTCGGTCCGGATAACTTCTTATACGGATGTTCTGTATG TGGAAAAACCTTTAAAGATAAAGATCAGCTACAAATTCATTTCAGTGTTC ATCAAGCGCCCAGTGCTTTCGGATGTGGTATTTGCAATCAAATCTACCCA ACCAAAGATGAACTTATTGATCATATGCGGCAACACGATGCCACACATAT GGTCCCCCACGAGGGCCCCATTCATGTCCCACTTAAAACATAAGGTCCTG TTGGTGGGAGACCTGTAATATTTTGAACACTTTTCGTATAGAACGTTTTA CTGATGTCTTTTTTATTGATAgactttgttgtaattttgtaaatatttct tacATATGACGTTTTTCACCTTATGCTCGTGTCCGAATTGCacaattttt tatcacattTATATAACTTTTTTCGGACGCTTAAGGTTTTTGCTACATTT TCCTGACAATTTTATAAGATATTTTCACGTTCATcgcctttttaaaatta tttttctaatgtACCTTTTCGTACTAGTAACGTGAAAGTTTTTTGCATGA TAGCTTTAGTatataaaaatgataaatttctaTTGATAGTATATTTTTCA GAGTTTGTAAATTTTTCTGCcattttttggatttatatAAATAGTTTTAG ATGATCAAAATATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041823XLOC_041823Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066889-exon-scaffold_462-1491911889:562328..562891TCONS_00066889-exon-scaffold_462-1491911889:562328..562891Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1510915933:562328..562891TCONS_00066889-exon-scaffold_462-1510915933:562328..562891Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1575043694:562328..562891TCONS_00066889-exon-scaffold_462-1575043694:562328..562891Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1491911889:566543..566836TCONS_00066889-exon-scaffold_462-1491911889:566543..566836Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1510915933:566543..566836TCONS_00066889-exon-scaffold_462-1510915933:566543..566836Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1575043694:566543..566836TCONS_00066889-exon-scaffold_462-1575043694:566543..566836Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1491911889:567160..567295TCONS_00066889-exon-scaffold_462-1491911889:567160..567295Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1510915933:567160..567295TCONS_00066889-exon-scaffold_462-1510915933:567160..567295Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1575043694:567160..567295TCONS_00066889-exon-scaffold_462-1575043694:567160..567295Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1491911889:568164..568410TCONS_00066889-exon-scaffold_462-1491911889:568164..568410Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1510915933:568164..568410TCONS_00066889-exon-scaffold_462-1510915933:568164..568410Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1575043694:568164..568410TCONS_00066889-exon-scaffold_462-1575043694:568164..568410Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1491911889:568670..569175TCONS_00066889-exon-scaffold_462-1491911889:568670..569175Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1510915933:568670..569175TCONS_00066889-exon-scaffold_462-1510915933:568670..569175Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1575043694:568670..569175TCONS_00066889-exon-scaffold_462-1575043694:568670..569175Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1491911889:569415..571449TCONS_00066889-exon-scaffold_462-1491911889:569415..571449Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1510915933:569415..571449TCONS_00066889-exon-scaffold_462-1510915933:569415..571449Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1575043694:569415..571449TCONS_00066889-exon-scaffold_462-1575043694:569415..571449Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1491911889:571761..573543TCONS_00066889-exon-scaffold_462-1491911889:571761..573543Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1510915933:571761..573543TCONS_00066889-exon-scaffold_462-1510915933:571761..573543Clytia hemisphaericaexon
TCONS_00066889-exon-scaffold_462-1575043694:571761..573543TCONS_00066889-exon-scaffold_462-1575043694:571761..573543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:562328..573543 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (1.02657e-7 tpm) - - (36.8022 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0011622 0.0102535 1.02657e-07 1.51485 36.8022 25.482 4.68625 7.13294 1.26663 2.12625 4.53283e-07 0.715428 3.32023 1.33884 0.398141 0.958868 0.967509 1.23623 0.428763 2.02392 0.000167589 2.5264 1.95198 0.772402 3.87386 5.76009 7.99242 1.81584 2.34428 3.42411
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066889 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
5001000150020002500300035004000450050005500Expect = 2.42e-32 / Id = 28.25Expect = 2.63e-28 / Id = 28.25Expect = 1.73e-30 / Id = 28.25Expect = 9.78e-24 / Id = 28.25Expect = 7.54e-27 / Id = 28.25Expect = 1.95e-47 / Id = 28.25Expect = 9.72e-27 / Id = 28.25Expect = 3.81e-26 / Id = 28.25Expect = 7.01e-26 / Id = 28.25Expect = 1.17e-25 / Id = 28.25Expect = 1.65e-25 / Id = 28.25Expect = 2.07e-25 / Id = 28.25Expect = 2.84e-25 / Id = 28.25Expect = 3.88e-25 / Id = 28.25Expect = 3.25e-24 / Id = 28.25Expect = 6.92e-23 / Id = 28.25Expect = 9.07e-23 / Id = 28.25Expect = 5.99e-21 / Id = 28.25Expect = 1.06e-21 / Id = 28.25Expect = 1.14e-21 / Id = 28.25Expect = 1.36e-16 / Id = 28.25Expect = 1.68e-19 / Id = 28.25Expect = 5.89e-21 / Id = 28.25Expect = 2.70e-20 / Id = 28.25Expect = 2.48e-19 / Id = 28.25Expect = 1.53e-16 / Id = 28.25SequenceZNF91
Match NameE-valueIdentityDescription
ZNF911.954e-4728.25Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE... [more]
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