TCONS_00066801 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066801
Unique Name	TCONS_00066801
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1293

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_46:360407..372127-

transcript sequence

>TCONS_00066801 ID=TCONS_00066801|Name=TCONS_00066801|organism=Clytia hemisphaerica|type=transcript|length=1293bp
ATTAACTGTTAAGAGCGGTTTTCGCTCAACATATTGTAGAAAGATGTGTA
AATATTTcgttaaaatatttaaaaaaattatgcaaaagtCATTTGGATGA
AGGAACTTGTTTGGATATGGAGAATTATTATTTCATATTGGCGTTACTTT
TAAGCTTATTTTGTTTGGTGAAAACAGaTGACATCTTCGCAATACTGGAG
AAAAACAACTCCACTACAAACGTAACGCAACTAAAAATCTCTGCAGAAAG
CGAGCTCCATAAAAAGTTATTTGGAAATTGTTCTCTCGAGCTGACAAAGA
ACAAATTCTCACGTGAATGTACAATGTTTTCATTTCCGGACGAAACCAGT
TCCATTACTGTCCGAATCGGGATGTCTTTGGTTCAGATTGAGGAATTCCA
TGAGTTAAATGGCATACTCACCCTCCGAATGTACTATCGACAGATTTGGT
GGAACAAGAAACTGACTTGGGACCCTGAAGAATATGAAAACATTTCTGAG
ATCAATGTCAATCCGAAATTAGTTTGGTCACCTGATATCTATATTTATGA
CAGTCGTGGCGAGGAAAAGATTCACGGTAGTTATTTGAACGTGGCAAATA
CGTTAATCTCTTTACGCCATGACGGCCGTCACATGTGGTTAGCGCCGTTT
AGATCGGAAACGAATTGTCCGTTACACGTCATCGATTATCCGTTCGACAT
TCAACAATGCGATATCAGGCTAGGGAGCATGACACTAGACTCGAAGAAAT
TGATTGTGAAATCAGAAGCTCCTTTTCTGGACTTGTCCATGTTCCACAGT
CAACGTGTCATCATGGTCTGTCATCTGATTCTGGCTTTAGCTTTCTTCCA
AACCAAAGTATTGAAAATGATTCCTGGAAGTGCTGGAGAGATCCCTTTCT
TCTCCTATTTCTTGGCTTTAACCCTTTCAACTCTGGTCATATTAATCGCA
ACATTGTGTTATTCATTGAGTATCTTTTTCGCTAATAAGGTTGTTCTAGA
ACTGCCTTATTGGCTACGATACTACGTCTTGGAGCAACTAACCCCCGGTG
TTGGCCTACGTATTATACACCCGACTACCAAATGGCTTAAACAGTtagaa
aggcttgaaaatacgCAACGCCCGAATCGTACTATTCATCAACGGGCGGT
CGATATTGGTATCAAAGTAAATAGCATACCTTCAGAGCGTTTGTGGCGTC
TCTTGAATTTGACGCCCTTGTTGGAGAAAGTGAAGAACAGTGCTTGTGAA
GAGAATTGGGCGGAAGTGTCACAACAAATCGTCATCTTGGTNN

Run BLAST on NCBI

transcript from alignment at scaffold_46:360407..372127-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066801 ID=TCONS_00066801|Name=TCONS_00066801|organism=Clytia hemisphaerica|type=transcript|length=11721bp|location=Sequence derived from alignment at scaffold_46:360407..372127- (Clytia hemisphaerica)
ATTAACTGTTAAGAGCGGTTTTCGCTCAACATATTGTAGAAAGATGTGTA
AATATTTCGTTAAAATATTTAAAAAAATTATGCAAAAGTCATTTGGATGA
AGGAACTTGTTTGGATATGGAGAATTATTATTTCATATTGGCGTTACTTT
TAAGCTTATTTTGTTTGGTGAAAACAGGTACAGTAACTTCTCGTCTTTTA
TCCCAATGAGGTAATATAGCTTCAATGTTCTTCAACATTCGAAAGTGGAG
TCTTCGACCTGTGCCGTTCAAGAGAAAACTAAGCCTTTAGATATCCGCCG
TATTTCGGCTGACAGATTTTGAAATTTGCAAGAGAAATTTTTTTCGAAAT
CAGTCGGAAAATGATAGTTTCAATCATGCGATTATGTGAAAACAACGCAT
GCCGAGGATAGATTCCTCTCTAATACTACCCTGAGTATCAGAGGTTAAGT
TTTCAAAGAAAATAGTAACCTCTGAAGACAAATAATAGAAATTTTATCGC
GCATGTGTCAATCTAATCACTGTAGAAAAAATCAAAGATGAAGAGCAAAT
ATTACCATACTAGCCGGTACCCGGCGTCGCACGCCGGTTAAGCTGTAGCT
GAACGCACTAAAAGCCCCTTGGATGTTGAAGCTGGCTTAAAAAATGATCA
AATTAATAAAAAGATATCTCCAAATTTTGACTCTAACCCTCGAACCCTCC
CCCGGAGATCTTTTTCTCGCTTCGCTCGCATTAAATACGCCGTCCAGCTT
TCGACAATTTGAGAAAATGTCATGGTAGAGAGGAGTGAAATGTAGACATG
ACAATTCTTTATGAAAAAGTGGGAAAGCCACAAAGAATAGTGCAACTTTC
GAACTTTGTTTTTATCAGATTTAAAAAGATAAATAAGTCAATTCTAAATT
GCTTTTTTTAAAACTTTTTAATTTTTATGTTTTGATTTATATTTGAAATG
TTCTTTTCTATAAAAGAAACTTGTTTTGTTTTGAAAAGAATTCGAATGTC
ATTAATAAATACGATCGTTAAATACATTCTCGAAAATATTTCAAACAAAA
GAAAAGAAAAAGCAGAATCGGCCAAAGCTGGGCAGAAATTGAAATTACTA
AATGTAGATGGGCCTTAAATTTCAAAACAAAGGCTGAACAAAGTCTAAAC
CATGCTCTATTCGATCTGTCAATCAAAGCAAACTTATCGAGAACAAAACA
TTGCTTGCGAAATCGAAAGTGTGCAAATGGCGCGAATCCAATAGAACAAA
TTTGTGGAGCAAGAGACTAAAAGTCATAATTTTAAAACACAAACAAAGCG
AAAACGAAAGTGGTGACACACAGACACACAAAGCCAAAGCACCGCTATTA
ATATATAGATTAATGTCTAGCAGACTGTATCAGTATGCATTTTACTATTT
ACGAATTCCCCAGAAACCTCCAAATGTAATTGAAAGGAGTTTCTTTCAAA
AGAAATCTTTTACATATCCCCCAAATGTATAACATTAATTAGTAAACTTT
TGATTATGGAAATCTCACTTAATTGAATCAAAATAATAGACAGACTTTAT
GTTATGATTCTCTATCACTGACTCTTTTTACAAAGCATTGATGACTTTTT
GTAAGCTGTGTTTTTAACGACGGGAATAAAGATATCGACTATGACGCTCA
TCCAAGATCTTGGATGGTCGTCATGGTTACTTTTGTCTTCGCTGATTGCG
CGATGAATAGAATCTCGATTCGTCGGCACAGCGTAAAGCGTAAATATATG
ATTTTGAGCTGTGCTTTTCACGGTACTCTAATACTCGAGGTCGACACGAT
ATTTTTCGCAGCGAGGCTACCAGTCAACGCAGATGTGTTTGGACGTACTT
AGACTTAAGGTGAGGGTGTACTAAGGCTGTGTCTTTCTCCCAAAATACTA
ACTTAAGACTATAAATTTGAATTCACCTATTCGACCGTAGTCGCGCGGTC
AGGCGCGTGCCACTTAATTATTTAATCATCCTCCTAAACTCAATCCAATC
CTTTTTTGAAACCTTTTTCTGTTGTCTATAGGTGTGAAAGGACTGGGACG
GTTTTAGGGTGGTAAAATGGACAAAAAAAGCCAGTGCGGCAATTGGCGGC
TACGGTTGAAAAGGCGTATTTCCAATAATTTACAAAGAGATTAAAATTTA
GTTAAACTAGGTAAATTTAAGTAACCGTGTAACAAAAACATGTATAAAAT
CACCTATTTAAAAATTAAATGACCCTGCTATTAATATAAAATTTATTATT
TGGGAGTAACAAACCCAAGATGAGAGACAATGCGGCAAAAGTGGCCATTA
AAATCATCAGCATTTTATAACTCAAGATCACAATATTCCATAACAAGAGA
GTCAGTATCACCATCAACATATTACCATTGAGCATCAGAAATCCCAGTCC
TACTCCACGGTAGTGTGTTGGTAACAGTTCACTGATATATAAATACAATG
TCCATGGGCAAACGTATGCTAATAAACTTGTAAGATAGAGTATAATATTA
CTTGCGAGTTCGTTGTAATGTGTGCACAAGGTTATAAGGAATATCATCGA
CACCAAAACTTGTAGTCTGAATACACCTCTTGTCCCGCAAGTTGAAACGC
TTAGGGCGGCAAGGATAAGAAAAACAACGACGCAAAGGGCGGACAAAGGA
CGGAAAAAAGCGGGTAATTGTTCTTCGACGTCTGTGATTTGGCAATATGG
TGTCAATGTATTGTTTATTGCTATGGTGATATGAAATGTACTGAGTCCTG
GGAGTAACATTAATGCATAGATCTGGCGAGTAGTCGAAGCTATGGTCAAT
ACCAAGCCTAATAACAGGGATACAATGATGACATTCTCTGGACGCTTTCT
AAACATGAATCTCAAACTACCAAAAATGAAGTTTTTATAATTCATGGTGA
TCTTTTCTGGCAAACTTTGGCGACTGTCATCAGATAATTGGTTCAGTTTT
TTCACCACTTGATCGAAATCACCGGTACTGTTCAAATAACGGATACTCTC
TTCACCGGTGGTTAAAAGAAGGACCAGAACGAGGAGACCAGGTAAAAGTA
GAATTAAATGTCTGAAAAATGGTATTTTGATCCACGGTTTTAAATATATG
AGCATTGTTCCGATGAAGAGTCCAAAGGCTACGGATAGTAGCAAATATCT
ACTCCTTGTTTTCGAGGGAAGTGACTCTATGAAATGAACGAGGGAAATTG
TCATAAATCCGCCACACGTGAAAACAATGATAATCTTTGTTGCCAGGTCT
TCCCATAATATATCACCGGCTGCTATGGATATCAAACGAAAATAGATATA
AAGGAATAAGGTGAACTTCATCGTCAAAACTCGACCCTTGATGTCTGCTA
TTAGCCCGAAAACAAGGCTACCTGTTGCCATAGTAATTATCAAAACACAT
CGAATGATTGTAATCTCTAAAGATGAAAACTTGTGCTTGCATTGAAACTC
CGTGTATGAGATATCCATAAAGTTTGCCTCGATAAGCCAGCATGTTATGA
CAAGTGCTAGAAGAATGCATAGCTTGAAGATTTGGGTAACAGAGACACCA
AGATCGTTTAATACTTGCTCTAAAGTTCGTCCGCTTCGAACCATTTTGTC
ATATTCTGTTTGTTATACTTATACCTGAAAAAAAAAGAATTAATATTGTT
AGAAGGGCAAAACGAACAGGGTTTAAACGAGTTCGGTTAGATCGTCGAGG
TCACACAATGCTTACAAAAGGGTAGCGTGTGGCAACCAGTCTAAAACGCT
GAAAATTTCCAATCGATGAATCTGACGTTAGAGAAGACGTTTGTGACATA
ATCGGGAATCACACCGTTGTTGATCCAGCACAGGATATAGTAGTGACAAC
GCAACAGTCACCCCATTTCATTAACATATCATGATTGATAAAGATCCAAA
ACAAAGCGAAAAACAACCCCAATTCACCAAACTTTTCAGACTTCTGAATA
CAAGTTAATGTTTTCAAGAACCACAATAAGAAACCTTGCACATCTTTGTC
GAAAAAACTTGATAAATCGATTTAAAAACACACAAACTATACATTACAAG
AGAAAAGGGATGTGGCAAAAATACCTGATAGTCAAACGTCAAAAAAGACT
CTTTGATGCACATATATCGCGGTATGAAATTAATTTCCCATTTCCGCAGC
ACTTTTTTGTTGAAAAGCTAAATTGATTGAAAAGAAAATCTAATTAGACT
GTATTAATCTTTTCTGCTTTTGTCGATGTATATCCTGCGCATGCGCTTGG
GTTGATCAATTTGCAGGTTGTGTTAAACTGATTTTAAAGACACAACATTA
AAGTTTCCTGCAGGGCATTAAGAGAAGGATTAAAGTCAAGACTGATTAAA
AAATGGTTTTATAATACCTGAGTAGTGCCTGTTATCAAAATTCTAGTCGG
ATGACTAAAAATAAAGCTCATAAAAAACATGAATTTTCAGACATAAAAAG
ACAAAATATACTAAACCCAGAACGCAGAAATCGATCATAAATTTGATGTA
ACAGGGACATTTTCTCCATTAATCAAAATGTGACCTAGTCTACAAAATAG
ACAGATCCAGGCTTTTAGGCCTTACTCGAAGAGTAAGAGTTTTACGCTCG
AAACGAAGGAAGATATGACGTAGCCTAAATGTGACCTTATCATGGCCATT
ATTTGACCCCTAAGTTACCCTGTATCGTAAATATATAATTTCTACTCATA
CACGTTTTTTTTTTTATAAGGAACCTTAACTTTGCTCTGAGCCTGGAGTT
TCTTATTTTTACAGAGAATTTCAGTCTCAAAGTTCCTTATCGATTTCCTT
ACTACATAGGAAATTTTGAACTTTTTGCCCCTTGAAAGATCAAAATTTGG
TTAAATTAGTCCCAATAAGGTACATTATTTTCAAATCCACTTATTCTCAG
CCTGAGCAGTTCCTTAACAATTCCTTATTTTTTGAACCATTTTCAGCCTC
GAGTTCCTTATAAACATGTTCCTTATAAAAAAAAAACGTGTATATCCGTT
TACAGTTTCCTTGGGAAAGAGCCTCCGTTTGATTCAAAAATAGTTTTCGG
TGCACCACAGAGAAAATAATTTTACGAGAAAGGAAATAAATGATTGTCGC
CGGGATAATTACCCAAGTAATTTAGAATTTAATTATTATGTCAATCACGT
CTTGTAGAAAGATAAAGCGAAATCGGCAAATTATGTTGGATATCCATTGG
ATTTAAGTTGCGCCAGAGAAAGTACTGGCAAAAACTACTTCAGTTTGAAG
AGGAGGATTTGAGTAGGGGTGTTTCTTCTCAAACATAAAACTTTCGGGAC
TTTTATATTTCTAATGCTCTCTATAATACGAGTTTTGTTAAATACAGACT
GATACGCCTCTTTATCTTAGCAAGATGATCCCACCAGATATGATATGTGA
TAAGTTGTCAATATTGATTTCGAAGATGCTTTCGATACCATGGAGTATAC
TTAATATAAGTCTATTCATTGAGTTTGAACCCGAAGTGCTAGAAGCAAAT
CGTCAGCCTTTCCAAAGCAAGAAAAAGAGAAGCCTTAAAATTTTCGCCTT
ATTTCGGATGACGAATCTAGCGTTTGTATAAAAATCGAGGGGACAGCACA
ACTTTTGCAGTGCTTCAAATCGTAATGATATTCATCTTTAGCCTTCTGTT
ATGACTTACTGCGTATACCCCTGCGTTAAAAAATACACGAATGGGAGTTG
AGTTCGAGCTGAATAAAATGTGGAAGCCAATACATTGTATTGACACGTTC
ACAAAGACAGTCGATTAACATCTTTTAATTTAGTAAGTTTGCAACCGCAG
TCGAGGGTGATCCGAAGGCTCTTCTTTCGATAGCTAGCTAGCCGAATGTA
GAGGAGGGCGCCACTCCTTTCAACTTTTCAACAACTTTACACACCATAGC
TGGAAGATGCACCTTCATTATACCGCCGATAAAATATCTTGTAAACTCGA
ACCCCCTTCGAGGTAAAGGGTTGGTAGAAGTATTTATTCGAAATTACAGA
ATTGCTTTTTTTCTTATTTAGATGACATCTTCGCAATACTGGAGAAAAAC
AACTCCACTACAAACGTAACGCAACTAAAAATCTCTGCAGAAAGCGAGCT
CCATAAAAAGTTATTTGGAAATTGTTCTCTCGAGCTGACAAAGAACAAAT
TCTCACGTGAATGTACAATGTTTTCATTTCCGGACGAAACCAGTTCCATT
ACTGTCCGAATCGGGATGTCTTTGGTTCAGATTGAGGAATTCCATGAGTT
AAATGGCATACTCACCCTCCGAATGTACTATCGACAGGTAAGATTACCAT
TTTAGGTTCTTGTATCATGGTGGTAACTCTGATCTCATTTTCTAAATTCA
AACTGAATTACAGTTGACATTTTCTAATTCGACGTTACTGATCTATACAC
TCCATTATTCGATATTGTTAACCGGTTACTTTCTCGAAGCGGGCTACAAG
GCCTTTTGTGCAATGCAATTGGTTTATTGCGCATGACGACGGGCCTACAC
AGCACATAGTTACCCGTTGTTAGAAAAATTCATTGCGACGTCAGTTTTTT
CAAAGGAAAATGAACACTGCATTGACATCATTTTGTCTCAAATAATTACG
CATTATTGCCTAGCAAGCTTGGCCGTTACTTGACCTCGGGCAATATTTCT
CAGTACAGCCCTCACAAACTGGTCATTATATTGCATTAATATTGAGAGTC
ACCATCAACAAGAAACTCTCATAAAGGACGCTCTACTATTTGATACGCTC
TTTTATTTGGCGACAATTATAAAGCGTCAACTGTAGTGCAGAATTTTTTC
TCAGATTTGGTGGAACAAGAAACTGACTTGGGACCCTGAAGAATATGAAA
ACATTTCTGAGATCAATGTCAATCCGAAATTAGTTTGGTCACCTGATATC
TATATTTATGACAGGTAAATCTTCCGTTACAGTCAACTCAAATCCTTTAT
ATGACCTTTTTTTCTCATTGAATAGGCTTCTACTGCTCCCTCAATTGAGG
GTTCAAACACTCTTTATAAACGACACTACCTTCTTCGAACGATTGCAATT
CCATGACCTAGCTGGCACACAACGTTATTTGCAGCTTTTAGGTGTAAGAT
CGGGATAAGCCTTCTACCGGCAATATCATAGTGGTTTCTCTACCTAAAAC
GAAGTCATCATTCCAAAATTTTAAAGTAATATACTAATACAATATCCCAC
TAACCGAAATTCTATTTTAGTCGTGGCGAGGAAAAGATTCACGGTAGTTA
TTTGAACGTGGCAAATACGTTAATCTCTTTACGCCATGACGGCCGTCACA
TGTGGTTAGCGCCGTTTAGATCGGAAACGAATTGTCCGTTACACGTCATC
GATTATCCGTTCGACATTCAACAATGCGATATCAGGCTAGGGAGCATGAC
ACTAGACTCGAAGAAATTGATTGTGAAATCAGAAGCTCCTTTTCTGGACT
TGTCCATGTTCCACAGTAAGTATCATAATTGTTTTCTTCAAAATTCAATC
TAACACAGTTATTGTTACAGTGAAGTAGATAGAATCAGAAATTACTCAAG
AACATTCGAAAAAAATCGAGCGAAATATAGAGAAATAAAGAACTACCTAA
AGGGAACTTTTTTTGGCGGGAACTAATTTTGATGAGCGGCAAAAATCCTG
AAAATTTCTAATTTTGGCGAGAACTTATTTTGGCGAATGAGCAAAATATT
TAATTTTGGCGGGAAATAATTTTGGCGAATTTTGTCTAAATTCGCCGAAT
TCGCTAAAATTAGTTCCCGCCAAATAAGTTCCATTAAGGTAACTTGCAAT
CTTCAGTATTTCACAATTATTATTAATATCACGACACTGATTATTAGCAG
GTAGGACGAGAATCATAGATATGTATTTTTGAACATACTATTGACAGTCT
AAGCAATCCTAGGCAAATTTCGGCAAAATTGCAAAATATTTTGTTTTTAA
AATGAAAGCCCAGTAAAAACAAATCATTGTTGTCATAGACTGCAGTGGTA
ATAAAATTGTCTGACACAGGCTAATTTCAAAGCTTGTACTAACGACGTCA
TAATTTGGTTTACTTCAGTAAGGATATACAGCTTGATATGGATCAGCCTC
CATAGAGTATCTCTATGTAGAAAAATTTTATAAGAAATGCAATTACTGTC
ACTGAAAAGAAACATTTATTCACCATTCAACGCACCAAAGCAGAACACCA
TAAACACCCATCATTGAATATATAAAAGCACTTGGCAATCCAAAAAAAAC
ACAGGTACACTCTCACTCACTAGATTTTCAAATTAATGTATGTAAAACTA
AATTAGTTTCATTTCTTTTTCACCTTCAATGTGGCTTTGATATTTGTTTT
GTACCGCATGCTAAAAAGTTTGTCGTTACACCTCCGTCTCCATGCAAAAA
AGGATGGCCTCTATATTTAGTCATAACGAAAAACGTTTGGAACAAGACAC
GAGGCAGATAAAAAACTCCAAAATTATCGACACTCTTAAAGCTGTCTCTA
TATCCAGGCCCGGCGGAAGTGGAGAAATTTCAGACTCACAATTCCTATCG
AATTTTATCTCATTTTGAGCCTTCAGCCTTCCCACTTTTACAGTTGTTCC
GCCGGGCCTGATATTCAGAAAGTTTCGATATAACTGAAACGGATTTTTCG
GTGCCTTTTAATAATTTCAGCCTATTTTTCCTCTCCGTAACCACGAACGG
CTCCTAGTTCCCTTTGGCGACTAAATGATTTATAGCAATGTATTTTAATA
ATTCACAAGATCACTGACATTATCAATATAGCATAGTTCAATATTTTACA
GATCATTCCGAATGGAATATCCTATCTGCGAACGGACGGAACGAAATGAA
CTTCAAAAATCCGGACATGAACAAATTCTCAGAAATCATTTATGTTGTTC
GAATCAAACGAAAGCCATTATTTCTCATTACGTCATTAATCATGCCCAAA
TTTGGAATCACTCTGATCAGTCTCCTCGCTCATGTTATCCCGGCGGCATC
TGGTAAGAAATTGTCACTCTTTGTCCCATACAAATCAAAATGTAGAATAA
ACTTTTCCCTGTCAATTCTAAGTAAAACTTTACTATTTGTGCGAGTTTGA
TTTTTCCTGAGCTCATATACTTAAACTTAAATTCCCAATTTAATATCTAA
TTCTTACATTCATCTAATAAGAAATAAAATGCCAACAATTGGGACGATAA
TGTCGGCTCATAAACAAGTATATTTTATTTGACATTATTCCATATACACG
CTCTTGAAATTAGGGAAGTCTACTCAAAAGAAAACTATTGCGAATCTGTA
ATTTCTTTTCATCAATAGGCGAACGAATTCTGATGTTGATTGATTTGATG
TTAGTATTGGCTTTATTTTTGACCAATGTTATGGATATCATCCCCGGCGC
TGCTGGAGAGGTTCCTTTCTTTACGTACTTTCTTCTCTTGACATTGATTG
GGATGGTGACCAATATAGTCACCATGGTCTATACTTTAAGTATCTACTTT
GCTAATTGTACTGTCTTGGAAATGCCTCGCTGGTTACGATATTACGTTTT
AGATCATCTAGCACCAAGTATGGGTTATCGAGATCGTTATACAACTCCCA
AATGGATGATCAAGTTAATGGCTATTGAAGAACATTGCCAGAGAAACCAA
CAACAGAATCCAATAAATTCAATTCTCGGTAAAAGACACCCAGGACGTTT
GTGGGGAGCTACTGAATTACGGTCGAATGTTATAGAGATTGTAGATGATT
TATCGCAAGGTCATTCACTCTCGTCATTAAATTTATGCCTTTTATCCCAG
AAATTATCCCTGATACTTGATTGGTTAAAGGAGGAAGAGAGAAAACGGAT
ATTGAAAGATGATTGGTTACTGGTTGCTAAGGCACTAGATCAAGTGACAT
TATACATCAACTGCTCTATATTAGCGACAGTCATTTTTTGGTTCTTTTAT
AAAGCTTATAGTTGCTCACTAGTTAATTGAAATTTCCTGTAGAGATGACA
TATGTCTACAAAATGAATTTTGTAATTTGTTCTTTAAGTTACGTTAGAAT
ATTTGTTCTTTGCTTGCTACTTGATATAATGATACAAATCTGAAAGACTT
TTTTTCTATTAGACTGGAGTTGTTCATAATGCGTGTAATACAGTAGTATA
GGCGTTATAATGATAATACAATTATTGTTACGGGATTTAGTTTGTATAAA
AGACTGGAAGAATCCGGTGTTCCAGCCTTTTAAATACCCCGGCTAGCTAC
GCAGAAACTAACCAAAATGACCAAGGAAGATTGATATCGTTCCAGTCGAT
CTGTATCGGTAATAACCATTGTGTAAAGGTCAGTGTCAAATCTGCTTATA
ACCTCTCGAATGGTTCATAATGAGATGTACACATATAATCTAGGTGTTGG
GTTTTCGGCATAGTGATAAGAGGCTACCGGTGAAAGTGTAGCTATTGCAG
ACGGAAGGTCGAATCCTTTCTCAAAAAGTTCATATAGTAAGCTTCATACA
ATTTTTGAACAAGAGCTGTGAGTGAAATATATCAAGACTGCCTTGTATTC
AATATTTTGCACATTTTCTAGACCATCCACAATGGCTTTTAACCTCCAAC
AGATGTTTCAACGAAACCAACCGAACAAATGCAAGGACTGATAATGACCA
ACCCGATAATCACCAACAAGAATTCTCAACTGTAGTGTGCCATCTCAACG
TGAAACGAAAACCAATGTTTTTAATTTCTGCATTGATTTTACCAAATGTC
GGTTTATCATTTCTCAGTATTTTGGTTTACTTCGTTCCGGCAGCTTCACG
TAAGATGAGATTTTGAAATCAAAACAAACACTTTCCATATAAGAAGAAAG
AGGAGAAGAAGAGATTCCCTTTCAGAGTATTTAGAATGGGTCCCTGTCGG
AGTTTTTGATTTTTCTAAAAAAACGATGCATTGTGGGATTGTTTCGGGAG
TATTACAATAGAATTCCCTCGAGGAATTCCTAAGAGATTTCTATTGTAAT
ACTCCCAAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAAC
TCCGATAAGATCTATTCTCATGGTCATGGTTTCTCAACAAAGGTTATAAC
AAAAGAACCAATTTATCGAATTTAAACTGCAATGCCTTAAAGCCAACCAA
ATTCTCATCGTTTTGTCTAATACTGTACAATCATGTTGAAGAGCTAAACC
ATACGTTTTCTTTTCTCTATCGACAGGTCAACGTGTCATCATGGTCTGTC
ATCTGATTCTGGCTTTAGCTTTCTTCCAAACCAAAGTATTGAAAATGATT
CCTGGAAGTGCTGGAGAGATCCCTTTCTTCTCCTATTTCTTGGCTTTAAC
CCTTTCAACTCTGGTCATATTAATCGCAACATTGTGTTATTCATTGAGTA
TCTTTTTCGCTAATAAGGTTGTTCTAGAACTGCCTTATTGGCTACGATAC
TACGTCTTGGAGCAACTAACCCCCGGTGTTGGCCTACGTATTATACACCC
GACTACCAAATGGCTTAAACAGTTAGAAAGGCTTGAAAATACGCAACGCC
CGAATCGTACTATTCATCAACGGGCGGTCGATATTGGTATCAAAGTAAAT
AGCATACCTTCAGAGCGTTTGTGGCGTCTCTTGAATTTGACGCCCTTGTT
GGAGAAAGTGAAGAACAGTGCTTGTGAAGAGAATTGGGCGGAAGTGTCAC
AACAAATCGTCATCTTGGTNN

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041768	XLOC_041768	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_46	supercontig	scaffold_46:360407..372127 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0741139	0	0	0	0.208728	0.230809	0	0	0.183353	0.178023	0	0.00328645	0	0	0.4737	1.46876e-08	0.12714	0	0	0	0	0.0364227	0.125908	0	0	0	0.0363261	0

Blast

[Close]

BLAST of TCONS_00066801 vs. Swiss-Prot (Human)
Match: ACHA4 (Neuronal acetylcholine receptor subunit alpha-4 OS=Homo sapiens GN=CHRNA4 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.030e-24
Identity = 58/175 (33.14%), Postives = 90/175 (51.43%), Query Frame = 3

Query:  228 QLKISAESELHKKLFGNCSLELTKNKFSRECTMFSFPDETSSITVRIGMSLVQIEEFHELNGILTLRMYYRQIWWNKKLTWDPEEYENISEINVNPKLVWSPDIYIYDSRGEEKIHGSYLNVANTLISLRHDGRHMWLAPFRSETNCPLHVIDYPFDIQQCDIRLGSMTLDSKKL 752
            + +  AE  L KKLF         NK+SR     S       + VR G+S+ Q+ +  E N ++T  ++ +Q W + KL WDP +YEN++ I +  +L+W PDI +Y++       G +     T   L HDGR  W  P   +++C + V  +PFD Q C ++ GS T D  K+
Sbjct:   31 ETRAHAEERLLKKLFSG------YNKWSRPVANIS-----DVVLVRFGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNN-----ADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKI 189

The following BLAST results are available for this feature:

BLAST of TCONS_00066801 vs. Swiss-Prot (Human)

BLAST of TCONS_00066801 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ACHA4	7.030e-24	33.14	Neuronal acetylcholine receptor subunit alpha-4 OS...	[more]

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TCONS_00066801 (transcript) - C. hemisphaerica