TCONS_00066738 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066738
Unique NameTCONS_00066738
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1278

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066738 ID=TCONS_00066738|Name=TCONS_00066738|organism=Clytia hemisphaerica|type=transcript|length=1278bp
ATcttgttcttcttctttcattttcagCACCTGATCAGTCggttaaaagt
aataaaagaaaGCAACCTAAAGATGTACCAAATAAACTCGATAANCggtt
aaaagtaataaaagaaaGAAACCTAAAGATGTACCAAATAAACTCGATAA
CAATAgtacaCCACTTTCCGGAAGGACCCCTGAATTAGAAATGACATTAT
CGCCCATTATTAAAGATCATGATGACCTGATTCAACGAATGCTAAAAAAT
CAGAAGATGCTTCTAGAGAGGATCGAGAAATTAGAGTCCAAAAGTAGAAA
CGAAAAGAAATCGAAGAAGATCACAGTTCGAAGGACGACCAGTAATTACA
TCAAAAACAGCTATAAGAAAGTTGCTGAAAAACACAATAAGCACTGGGAC
TTTGATCAAAGCGTGTTTGCCGACTGCAATCATGAGTTAACCCAGAAGGT
TAAATTGAACGCACTGGCGCTGGATAAGACCATTACCCAGGATGAGTTCC
AAGttggAGTTCAGACCTACTTCCATTCAATAAAGTACTACAGTGGCAAG
AAAACAGATACATACTTGTGCGAGAAGAAATATAATCAAAGAAAAGTGAC
GAAACGTGACAAGCGGAGAGCGACTTTGAGTGGGTGTAATTCACTAGAAC
CAGACTTAAAAGCAAAGattcaaaaagttcttgaagTAGAGTTCATGTCA
TCTGAAGAAGATAAATCTGACGGGGAGGTTGACCATTTCGAGACGCGACC
TCTAAGATGGCGCAGTTTGGAATGTGACCGACATTTCGAAATGCTAGATA
AAACGGCAATAAGAAAAATGTCATCCAAAGCCCGTCGACAAACGGTTATC
AGAAAAATGGGCCCATATAGCAGTCGACCAGCACCACAATGTACCGAACA
AAACAGTTGGGCCATACGTCAGAAATAAATTTACTTGACATTGATATGAT
TTCATCTCTTCTACATTATGAATTGATTTTGGGTACATGAGGATGTTTTG
AAAGAGAATTTATACACTGATACTTTGTCGGTTTAAGTGCTCAGCGCAAA
ATTTTATATTAACTTTcattgtcgttctttttgttagatattttgcaaaa
ttttatattAACTTTCATTGTCATTCTTTTTGttagatattttgcaaaat
tttacatTAACTTTCATTGTAAATCTTTTTGTTAGATATTTTTAACTGAT
ACTTTTAGCAGGTCTAAAGGTACTTTTAGGTATTTTTTTATGTCtgtttt
taaatgtttcaaaCTCTTTGTATATGTG
Run BLAST on NCBI

protein sequence of TCONS_00066738-protein

>TCONS_00066738-protein ID=TCONS_00066738-protein|Name=TCONS_00066738-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MTLSPIIKDHDDLIQRMLKNQKMLLERIEKLESKSRNEKKSKKITVRRTT
SNYIKNSYKKVAEKHNKHWDFDQSVFADCNHELTQKVKLNALALDKTITQ
DEFQVGVQTYFHSIKYYSGKKTDTYLCEKKYNQRKVTKRDKRRATLSGCN
SLEPDLKAKIQKVLEVEFMSSEEDKSDGEVDHFETRPLRWRSLECDRHFE
MLDKTAIRKMSSKARRQTVIRKMGPYSSRPAPQCTEQNSWAIRQK
Run BLAST on NCBI

transcript from alignment at scaffold_459:190526..201531-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066738 ID=TCONS_00066738|Name=TCONS_00066738|organism=Clytia hemisphaerica|type=transcript|length=11006bp|location=Sequence derived from alignment at scaffold_459:190526..201531- (Clytia hemisphaerica)
ATCTTGTTCTTCTTCTTTCATTTTCAGCACCTGATCAGTCGGTTAAAAGT
AATAAAAGAAAGCAACCTAAAGATGTACCAAATAAACTCGATAANCGGTT
AAAAGTAATAAAAGAAAGAAACCTAAAGATGTACCAAATAAACTCGATAA
CAATAGTAAGATAATTACTTTTTTTGCTATTTAATTCAACTTCATTTTCC
ATGGAACTTTTTTTCTAAAAAATAATCGCATTTTTTATTTTGTATCTACA
AAAGGCACTACAGGTAATTGTTCAATTCAATTTTAATCTATGCTAGGTTT
CTCTAGAAATGATGATTGCTTTTCTAAGAATGGTGCTAGATTTCCATTTT
TTGGGAAAATAAGAATCTCAGCCTAACACGCAAAATTTTTTTTTCAGGTA
CACCACTTTCCGGAAGGACCCCTGAATTAGAAATGACATTATCGCCCATT
ATTAAAGGTAACTACTGCAAGAATTAGTTCTGTCAAATTAATGTTTACTT
AAAATATTTATAATCCCTCGGAAAATGAAAGAATCTTGACAAAAAGTGGG
GAGAACCCATGAAAACTGATCCTGTGAAGCTTGTCAACTTAGTTCCTTTT
GCACAAAATTAGTTCTCTTGTACATCATTTCAAAGTCAAACGTTACACTC
TACACTTTTTCTTTTATTGACTTCCAAAACTCCATTCTCATCTTAGTGTT
ACAGCAGATGTTTTGAATTTTGTGATTGAATTAGGTCAGTTACACAGGAA
AGAATTGGTATATTGCATTATGAAAACTGATTTTTCACATGGGTGTGAAA
GTGTAAATAACACTTGTTTTTGAATTCAGTATTAGACTAAAACAATTTAA
ATTTAAGTAAGANCCAAGGGTGTGATCTAGTTCTTTTTTCACATGGGTGT
GAAAGTGTAAATAACACTTGTTTTTGAATTCAGTATTAGACTAAAACAAT
TTAAATTTAAGTAAGAATTATTGATACTTATACAATAAGGTGTAAGCACA
GGGGAGGTCAGTAGTTTTAAATCTTCTACAGTTGTAGGTAGTAATATCAA
ATAAATGGTATGTATCTGTAATTTTTTGATTTTTACTACCTAGTAGTAAA
AATCTATTTTTTTTGAAAAGTTGTTTGCTATAGAAAAAAANATTTTTACT
ACCTAGTAGTAAAAATCTATTTTTTTTTTGAAAAGTTGTTTGCTATAGAA
AAAAATTCTCGAAATGTTTTGTCAATATAAAAATTACTTTAATTCTAAGT
GCAAAACATAAATTTTTGCACTAAGTGAAAAATGTGTCTCGGAAATGATG
ATTTCTTTAGCTTTTTTTTGTGAAATATTTCTGAAAAGCAACGAAAAATA
GGTGGTCTCAATGCAGCTCAATGTCAAATTGTACCAAAAACTTTACTACC
AGGGTTTCTTGTCAAATTTTGCTATTATTATTATTATTATTATTAATTTA
TTTGGTAAAGCAGGTCAGGTTCTATATACAAAACTATATACAATTATACA
CAATTCTGTACATATTGGCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAAAAACTGATGTGGACCTACTGGCTAAAAAACGAAAAAG
TAAAATCTTGTGAATCAAGCTAAAAGTTGGTTGAATCAAGCTAAAAGTTA
GTTGAATCTAGGAACAAAAAGTTGATTAGGATTAAGACTCAGGAGAATTT
AGGAGAAATATACATATATAAAAGTACATAAATAAACTCTATGTACTAAT
AAGCTAAAAATTTGCTAAGAAAAAAATATATATTCAGTAAATGTAATTTA
GTAATAAACATAATCTTTATATAATAGTGCACGACCCGTCATATTAAAAT
TAATTTTATCCAAACAATCAGATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGTTCCCAACACCA
TAACGAGTCATCTGGGTCGTCAAACATAGAAATAATATGCCATGGACAGG
TTTCCAACACGGCTAAAAAGTGTGGTTAAACGAATCAGGACAACTCCGTA
AAAGTTCTAGATTACGGAGTTGACCGACTCCGCCTTTCCTAGTTTTACGT
GATGTCGTTCTCTTTCAGGAAGCGAACCACGGAGTTAGGCGACGTCGTTT
GAACTAGTTAATAGAAGTTTCCCGGAGTTTGGAAAACTAGGACAAACGGA
GTTTTGCTACGCATAAGTTTTGAGTGGTTTTCCGAAATTAGGTAAACAAC
GCCATGCAACGTAAATTTGCACGGTTTGTTCATCAGTTACAGTTATACAG
AGTAGGAAAAACTTTTGAAAACTGAGGTTACTTAGTATAAAGAACTTCGT
AAAACTCCGTTTGGAACTTTTTTTCATTTCCTCGAAATGTTTATGTAAGA
ACAAAATCGGTAGTAATATTTTGATTATAGGTTTTTTCTACAGGAAATTT
GTTTGTTTCTATATGTCCACTAATGTCACTTTTTAATTAAAATCAAACAC
AAGGTACTTTCATGGTAATTAAATCTCTTTCAAATTTATTGATACAATAT
ATAACATTGACTCTGAAGATATGCATATAATTCGAGGATTTGATATAAAT
CTCATTGTGATTGCAGGAACTTGTTGACCAATTTTGATGGAACAATTATC
CAGAAGCCAGCTGAAACGCGACACTAAAACAAAAATAAAAACAATTTTAC
ACTTCCGTCTCACAATTTGGGTGGGATCCCAAATCCATTTGGAATATTGA
CCGAAAATCCGTCTCTGATGGGAAATATCCCCTGAAATTTTATTCCCACT
ACTCTTACCCTCTTAGGCTCTTATGCTCACTCGAAAAGTCAGTAATATTT
TTGTGGAATTTTTCAGCTGTAAGAAATAGAATTTTAAATCCCCATTCGTT
AAAAACAAAGAGATTCTCCGCTCCATGTATCGGTATTCAGCTATTACTTT
TCCATCCCCACCGGTCACAAAATCTTAACGAGTCACTGAGACAGGGGTGT
AATTATAAACCGAATTTTCGTAAAGACCTGAAAAAGTTTACTTGCACTTT
ACGTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCCAGATTGACATTATTTCAT
TGTTATTGAGGTCTGAATCGCTGCTTCAAAAATGCTAGAGCTTGCAAAAA
CATTGCAGTTATTCAGACCAATCATCAAAACAAAAGAACCCGCGTTACGT
CACTTGATTGTTTAGTTTCTTTTATAAATTAGATTTTAACAACCCGAAAG
TTTGCGTGGCAAAATGTTGATAAAGAATTGAAATGAATCGCCTGTATTTT
TAAGGGATTTGTGTATTGTTTTAAGCAAACAGATTTATGCGTAGATGATC
GACTCTCACTTAGACGTGAAAATTAAACTTTAAAAAAATATGATATTAAA
TAATTCTTTTTTTCGCAATTACTTGATTCAATTAAAACAATTACTTGGTT
TTTATATTTAATTTTATATTGTTTACCTTTGGGACATGAAGGCGTGAAAT
GTGATGAATTGTTTTTGATTTGTCAACAAATATGTCAATTACGTGCTTTG
ATGTAAAGTGATGTCATCAATCTGAAAGAAAATCAGATATAAATTCAGTC
TACGCAACGGAACTTTCAAATATATAGAAGAAGTCTCATATCCTAAAGAG
TAGTATAGTACTTAAGATTTCGCCCGTCTTACAACGTCAAATCAAACAAA
TGTGCTTACATAAATTTTTAATACAAAATATGTATGACTGAATTAAAACT
TGCCAATAAAAAACTCTCATTTTCAAAAGGACAGAAAAATACTAGCACCG
AACCGACCCTCCAAAAGGGTAGTTCTTTAGAAGATTTCGCCCGTCTTAAA
ACGTCAAATCAAACAAGTGTGCTTGTATAAATTTGTTGATGCTAAATATG
TATGACTGGATTAAAACGTACTAATAAAAAACTTTTTTCTGGTTATTACA
CTAACTCAAAGTGAAATTATCGATCAAAATAAATATGCTAGCGAAAATAC
TTATATTTATTGTCCATTTGGTTGTTGATGTATGCTTTGGAAGTTGATAC
GTTCTCAGTGGCGAGGAAAGTCCAAAGAAACAATCTGCGAGCTAAGATAG
AGAAAACTTTGTCAGTCTTGAACATTTCCTAGTTAAAATTATAACTTAAA
AGACTTTTCAATTGAAAAAGCAAATTGGTCAATTCAAAGAATAGAAAATT
TCCTTTATTTCACAATTAGAAATTAACAAGAAAATTTACCTGGTTGTTGG
TTTCGTAGACTTTTTGCAACTTCCCCTCTTGAAAACACCACTCTGAATGA
ACTCTGGCGCCAAACAATATTCAATGAATGAACCGCGTTTCCAGAAGAAT
GGGAACTAAAATCCGTCTTTATTCCAATATCCCGGCCGGATAAAATTTGA
TCAGGAAAACTCCGTAAAACTATTTTTTTTCATCTCCCGATGTTATGAAA
ATCGAAAATTGGTTTTCCAAAGTTTCACGACACGCGCTTGCATAAAACCA
ACTTTTAGACAAGCATGCAAACTGAGGAAAATTACGATGAAAATTTATGA
TTATTTTGACGGAGTTTACCGAAATTAGAATACTCTATGTCCGTAAAACG
CCGTTTAACTCCGCTTTCCATCGATTATCCTGAATTCTCCAAACTCCGAG
AAACTCACTTTTTTAGCCGTGCAAGTCCTTGTTAAGTTTCGCGTTATCAA
TGTCCTTGTAATTTCTAACAGAAATCAATTTTGGTGGTGAACTTATACGC
CGTAGAATCAATAAGAAATAAATGAGGTCATGATCAGAAAGCCCCATTGC
ATATGTTCCTTTTTTCAAAACTTTATCTGGGTTCGATGTAATGGCCAGAT
CAATAAGTGTCTTTGAGGTTGCGGTGATTCGAGTAAATTTCATTATAACG
TTCGTCAAAGAATGTTCAGCAAGAACTTGGTTAAAGTCTTTCGTTAGTTT
GTTATCTTCGGACATGTCAATGCTGAAGTCACCAAGAAGAAATATATTTG
ATCGATGGTTAAAACGGTTCAGAATTAGTGTAAAACTTTGAAGAAACTTT
TTCATTTTGGGAGGGCGATAAATACAACCCAGAAGGTATTTTTGAGAGTT
AATAGTTCCTTCTATCCAAATCGACTCGATCTTTGTATCAACTTCAATTT
CATCTACCACAAGGTCTCTTTGGTAATAGACGAGGACACCACCCCAACTG
TCTTTAGCTTTTCTGTCTCTCCGATAGAAGAGATAATTGTCAATTTTTAG
ATCATCATCATCATGCTCAGTTTCGTTTAAGTGAGTCTCTGTGATTGCAA
ATAAGTCAAATTTACTTTCTCTTAAAAGAATTCTCACATCTTCGAGTTTG
TGGAAAAGACCATTTACATTCAAGTGACCACATTTTAAACATGGGATAGG
TGTCTGCAGTTGTTTGAGTAATATAGGATGACTGGCGACCATATTGTCTG
TGAACTTTTCACCTAAAGGTGCAGGTTGATCGCAACCCTGTTTTTGGTGC
TGTAATGATGGGCTTAACAGCATTAACCCTTGAACTTTTCACCTAAAGGT
GCAGGTTGATCGCAACCCTGTTTTTGGTGCTGTATTGGTGGGCTTAACAG
CATTTACCCGCATTAACCATATATTTTTGATTTTTTGTATTTGTCTTCTT
ATTCTTTTTTATATTGCTCTAAAAGAAGAAAGGCTTCTCCCACGACACAG
GTTCAGCCTTATTCACTAATTCTTAATGGAGTGAATTTTTTTATCTTTTT
TATGTAAAGGTTGTCAGTTGATTGGTTTAAGTGCTTGTTTTTAATTGTAG
CTTTCTGTTTAGATCATGATGACCTGATTCAACGAATGCTAAAAAATCAG
AAGATGCTTCTAGAGAGGATCGAGAAATTAGAGTCCAAAAGTAGAAACGA
AAAGAAATCGAAGAAGATCACAGTTCGAAGGACGACCAGTGTAAGGAAAA
GTAGTTATTTAGCTGGAAAGAGAAATTTGTTTTTCTTATTTATTATGTTT
TTTTCTCGATTTCGAAATATTGAAATATATAATTTTTAGAGAGTTTACTG
CTCTGGCTGCAGATGCTAGTTAAAAAGGAGAATAACACATTTTCTTGGCC
TTTTCTTTAATTAAATAGTTTTATTTGTAGTCTCAAAAACATGTTTTCAT
TTCAGAATTACATCAAAAACAGCTATAAGAAAGTTGCTGAAAAACACAAT
AAGCACTGGGACTTTGATCAAAGGTATGAAAATGTAACAATGTAACTTTC
AAAATGTTACAAGATTCTATTTATTATTTAAGGGGGGTTTCAATAATTGG
TAAAACTTTGGCCTGCAATGCCAGTTTACTACCATAATGCCATTTAAATT
TAAAAATCTTTCACCTGCGGACCAGTTATTGGTATTGTAAAGGAGTGTTA
CTGATGTGTGTCCAAATTGCAAACAAAAAAAAACAACATAAGAATTAGTT
GTCAAAAACATTGGTAACAAGAATATATTCAGGGTTTTTTTTAATTTTCT
TTCCACTTAGGGGGGTCTTTCTACAAGGGGGTTCATAAGGTGTCTTGACC
CCTTACCAAATAAAAGCACAAAACCTTGCAAATTAAGTGAAAACCCCTTT
TTAAAAATAAAACGTTGAATTTACATTTGCTAGATGCATTATATTAAAGT
GGTTTTTTATAACTTTACAGCGTGTTTGCCGACTGCAATCATGAGTTAAC
CCAGAAGGTTAAATTGAACGCACTGGCGCTGGATAAGACCATTACCCAGG
ATGAGTTCCAAGGTTAGTACATAACCGTATTATTGTGTTTTTATTGTTGC
CAGGCTACTGTATATTTAAAAAGTTAAAGTTTAAGCTTCTCTCTTATCAA
GATGTAGTATAAAAATTAGTAATTGTTTTATTTTTTTCAGTTGGAGTTCA
GACCTACTTCCATTCAATAAAGTACTACAGTGGCAAGAAAACAGATACAT
ACTTGTGCGAGAAGAAATATAATCAAAGAAAAGTGACGGTACGCATCCAT
GCTTTCTTTAATTCCGTTTTCTCTTTTCTCAAACCAGTATTATTAGATTG
GCCTCTTGGAAAAAAATTTAACCATAAATGCTTATTGTATTGTTAGTGTG
GTGCTGATTCATACTTTTTGAGCTCATAATTTTTATACTTGTGTGAATAT
TTGAGCAGGGCTTAGGTAAGTTCCTTGATGAGCCACGTCTCTGTATGATC
AATCTGTCGAGAGAAGAGAATCTCAGCAGATAGTTTTCATTTTTCGAATT
TGAGTTAGCTCTCCTGCACCCAATATTTCCATTTGGGGATTATCGCTGGA
GATGGACTTCAAAAGTGGGATTCAAGGGTATTTTTTAACTTTGAAATGTT
TAATTTGAAATGTTTAATTTGAAATGATCAAGTTGCTTAAGTTTCGGATT
GTTTTATGTGTCACATGCTAATTATATTTCTGAAATAGCTAAGAAAGGTT
CAGAAACCACTCTGCACTCCTAAATCATTAACGTTCAAACAAAGGAAAGT
AATCATTCAGAAAATCCAAAAACACACTACATGTGACACGACAAGTCACA
AATTAGTAAATAGTAGACCGGTAAGCGAAAGCAAATAAAGCAATTGAGAA
ATGGAAAATTTAAATATTTTTTTTGGCATTTTTTAAATTCATAAAGTTAA
TAAACAATTCCATCTATGAAAAAGACACAACAAAGATTATAACGTTACTA
GCCAAAGATTCGAAAATTGGCTGTCTTCCATAAATATTTTTAAATTTGTT
TTCCAAACGAGGAATTTTCGAGGAATTTTCGCTCCCTGTTTAAAAGCACG
GTCCATTAGTACAGCAGAACAAAAATTTTCCTAAGATGAGCTAACTCTTG
CAATACGAATGACCTCAGCTCCAACGCAAGAATAAAACATGTTGGAGGGC
ATTTTGCTAGAACAAAATGGGAGACGTACAATCTCAAATGAGCAGCATCT
CTCTTGTCAAAAAGTTTTTTATCAAGGTGACCGTTATGTCCGTGATGTTT
GTTATTATTATACTTCACTTTCTTTTTAGAAACGTGACAAGCGGAGAGCG
ACTTTGAGTGGGTGTAATTCACTAGAACCAGACTTAAAAGCAAAGATTCA
AAAAGTTCTTGAAGTAGAGTTCATGTCATCTGAAGAAGATAAATCTGACG
GGGAGGTTGACCATTTCGAGACGCGACCTCTAAGATGGCGCAGTTTGGAA
TGTGACCGACATTTCGAAATGCTAGATAAAACGGCAATAAGAAAAATGTC
ATCCAAAGCCCGTCGACAAACGGTTATCAGAAAAATGGGCCCATATAGCA
GTCGACCAGCACCACAATGTACCGAACAAAACAGTTGGGCCATACGTCAG
AAATAAATTTACTTGACATTGATATGATTTCATCTCTTCTACATTATGAA
TTGATTTTGGGTACATGAGGATGTTTTGAAAGAGAATTTATACACTGATA
CTTTGTCGGTTTAAGTGCTCAGCGCAAAATTTTATATTAACTTTCATTGT
CGTTCTTTTTGTTAGATATTTTGCAAAATTTTATATTAACTTTCATTGTC
ATTCTTTTTGTTAGATATTTTGCAAAATTTTACATTAACTTTCATTGTAA
ATCTTTTTGTTAGATATTTTTAACTGATACTTTTAGCAGGTCTAAAGGTA
CTTTTAGGTATTTTTTTATGTCTGTTTTTAAATGTTTCAAACTCTTTGTA
TATGTG

Coding sequence (CDS) from alignment at scaffold_459:190526..201531-

>TCONS_00066738 ID=TCONS_00066738|Name=TCONS_00066738|organism=Clytia hemisphaerica|type=CDS|length=4428bp|location=Sequence derived from alignment at scaffold_459:190526..201531- (Clytia hemisphaerica)
AAACGTGACAAGCGGAGAGCGACTTTGAGTGGGTGTAATTCACTAGAACC
AGACTTAAAAGCAAAGATTCAAAAAGTTCTTGAAGTAGAGTTCATGTCAT
CTGAAGAAGATAAATCTGACGGGGAGGTTGACCATTTCGAGACGCGACCT
CTAAGATGGCGCAGTTTGGAATGTGACCGACATTTCGAAATGCTAGATAA
AACGGCAATAAGAAAAATGTCATCCAAAGCCCGTCGACAAACGGTTATCA
GAAAAATGGGCCCATATAGCAGTCGACCAGCACCACAATGTACCGAACAA
AACAGTTGGGCCATACGTCAGAAATAATTGGAGTTCAGACCTACTTCCAT
TCAATAAAGTACTACAGTGGCAAGAAAACAGATACATACTTGTGCGAGAA
GAAATATAATCAAAGAAAAGTGACGCGTGTTTGCCGACTGCAATCATGAG
TTAACCCAGAAGGTTAAATTGAACGCACTGGCGCTGGATAAGACCATTAC
CCAGGATGAGTTCCAAGAATTACATCAAAAACAGCTATAAGAAAGTTGCT
GAAAAACACAATAAGCACTGGGACTTTGATCAAAGATCATGATGACCTGA
TTCAACGAATGCTAAAAAATCAGAAGATGCTTCTAGAGAGGATCGAGAAA
TTAGAGTCCAAAAGTAGAAACGAAAAGAAATCGAAGAAGATCACAGTTCG
AAGGACGACCAGTATGACATTATCGCCCATTATTAAAGAAACGTGACAAG
CGGAGAGCGACTTTGAGTGGGTGTAATTCACTAGAACCAGACTTAAAAGC
AAAGATTCAAAAAGTTCTTGAAGTAGAGTTCATGTCATCTGAAGAAGATA
AATCTGACGGGGAGGTTGACCATTTCGAGACGCGACCTCTAAGATGGCGC
AGTTTGGAATGTGACCGACATTTCGAAATGCTAGATAAAACGGCAATAAG
AAAAATGTCATCCAAAGCCCGTCGACAAACGGTTATCAGAAAAATGGGCC
CATATAGCAGTCGACCAGCACCACAATGTACCGAACAAAACAGTTGGGCC
ATACGTCAGAAATAATTGGAGTTCAGACCTACTTCCATTCAATAAAGTAC
TACAGTGGCAAGAAAACAGATACATACTTGTGCGAGAAGAAATATAATCA
AAGAAAAGTGACGCGTGTTTGCCGACTGCAATCATGAGTTAACCCAGAAG
GTTAAATTGAACGCACTGGCGCTGGATAAGACCATTACCCAGGATGAGTT
CCAAGAATTACATCAAAAACAGCTATAAGAAAGTTGCTGAAAAACACAAT
AAGCACTGGGACTTTGATCAAAGATCATGATGACCTGATTCAACGAATGC
TAAAAAATCAGAAGATGCTTCTAGAGAGGATCGAGAAATTAGAGTCCAAA
AGTAGAAACGAAAAGAAATCGAAGAAGATCACAGTTCGAAGGACGACCAG
TATGACATTATCGCCCATTATTAAAGAAACGTGACAAGCGGAGAGCGACT
TTGAGTGGGTGTAATTCACTAGAACCAGACTTAAAAGCAAAGATTCAAAA
AGTTCTTGAAGTAGAGTTCATGTCATCTGAAGAAGATAAATCTGACGGGG
AGGTTGACCATTTCGAGACGCGACCTCTAAGATGGCGCAGTTTGGAATGT
GACCGACATTTCGAAATGCTAGATAAAACGGCAATAAGAAAAATGTCATC
CAAAGCCCGTCGACAAACGGTTATCAGAAAAATGGGCCCATATAGCAGTC
GACCAGCACCACAATGTACCGAACAAAACAGTTGGGCCATACGTCAGAAA
TAATTGGAGTTCAGACCTACTTCCATTCAATAAAGTACTACAGTGGCAAG
AAAACAGATACATACTTGTGCGAGAAGAAATATAATCAAAGAAAAGTGAC
GCGTGTTTGCCGACTGCAATCATGAGTTAACCCAGAAGGTTAAATTGAAC
GCACTGGCGCTGGATAAGACCATTACCCAGGATGAGTTCCAAGAATTACA
TCAAAAACAGCTATAAGAAAGTTGCTGAAAAACACAATAAGCACTGGGAC
TTTGATCAAAGATCATGATGACCTGATTCAACGAATGCTAAAAAATCAGA
AGATGCTTCTAGAGAGGATCGAGAAATTAGAGTCCAAAAGTAGAAACGAA
AAGAAATCGAAGAAGATCACAGTTCGAAGGACGACCAGTATGACATTATC
GCCCATTATTAAAGAAACGTGACAAGCGGAGAGCGACTTTGAGTGGGTGT
AATTCACTAGAACCAGACTTAAAAGCAAAGATTCAAAAAGTTCTTGAAGT
AGAGTTCATGTCATCTGAAGAAGATAAATCTGACGGGGAGGTTGACCATT
TCGAGACGCGACCTCTAAGATGGCGCAGTTTGGAATGTGACCGACATTTC
GAAATGCTAGATAAAACGGCAATAAGAAAAATGTCATCCAAAGCCCGTCG
ACAAACGGTTATCAGAAAAATGGGCCCATATAGCAGTCGACCAGCACCAC
AATGTACCGAACAAAACAGTTGGGCCATACGTCAGAAATAATTGGAGTTC
AGACCTACTTCCATTCAATAAAGTACTACAGTGGCAAGAAAACAGATACA
TACTTGTGCGAGAAGAAATATAATCAAAGAAAAGTGACGCGTGTTTGCCG
ACTGCAATCATGAGTTAACCCAGAAGGTTAAATTGAACGCACTGGCGCTG
GATAAGACCATTACCCAGGATGAGTTCCAAGAATTACATCAAAAACAGCT
ATAAGAAAGTTGCTGAAAAACACAATAAGCACTGGGACTTTGATCAAAGA
TCATGATGACCTGATTCAACGAATGCTAAAAAATCAGAAGATGCTTCTAG
AGAGGATCGAGAAATTAGAGTCCAAAAGTAGAAACGAAAAGAAATCGAAG
AAGATCACAGTTCGAAGGACGACCAGTATGACATTATCGCCCATTATTAA
AGAAACGTGACAAGCGGAGAGCGACTTTGAGTGGGTGTAATTCACTAGAA
CCAGACTTAAAAGCAAAGATTCAAAAAGTTCTTGAAGTAGAGTTCATGTC
ATCTGAAGAAGATAAATCTGACGGGGAGGTTGACCATTTCGAGACGCGAC
CTCTAAGATGGCGCAGTTTGGAATGTGACCGACATTTCGAAATGCTAGAT
AAAACGGCAATAAGAAAAATGTCATCCAAAGCCCGTCGACAAACGGTTAT
CAGAAAAATGGGCCCATATAGCAGTCGACCAGCACCACAATGTACCGAAC
AAAACAGTTGGGCCATACGTCAGAAATAATTGGAGTTCAGACCTACTTCC
ATTCAATAAAGTACTACAGTGGCAAGAAAACAGATACATACTTGTGCGAG
AAGAAATATAATCAAAGAAAAGTGACGCGTGTTTGCCGACTGCAATCATG
AGTTAACCCAGAAGGTTAAATTGAACGCACTGGCGCTGGATAAGACCATT
ACCCAGGATGAGTTCCAAGAATTACATCAAAAACAGCTATAAGAAAGTTG
CTGAAAAACACAATAAGCACTGGGACTTTGATCAAAGATCATGATGACCT
GATTCAACGAATGCTAAAAAATCAGAAGATGCTTCTAGAGAGGATCGAGA
AATTAGAGTCCAAAAGTAGAAACGAAAAGAAATCGAAGAAGATCACAGTT
CGAAGGACGACCAGTATGACATTATCGCCCATTATTAAAGAAACGTGACA
AGCGGAGAGCGACTTTGAGTGGGTGTAATTCACTAGAACCAGACTTAAAA
GCAAAGATTCAAAAAGTTCTTGAAGTAGAGTTCATGTCATCTGAAGAAGA
TAAATCTGACGGGGAGGTTGACCATTTCGAGACGCGACCTCTAAGATGGC
GCAGTTTGGAATGTGACCGACATTTCGAAATGCTAGATAAAACGGCAATA
AGAAAAATGTCATCCAAAGCCCGTCGACAAACGGTTATCAGAAAAATGGG
CCCATATAGCAGTCGACCAGCACCACAATGTACCGAACAAAACAGTTGGG
CCATACGTCAGAAATAATTGGAGTTCAGACCTACTTCCATTCAATAAAGT
ACTACAGTGGCAAGAAAACAGATACATACTTGTGCGAGAAGAAATATAAT
CAAAGAAAAGTGACGCGTGTTTGCCGACTGCAATCATGAGTTAACCCAGA
AGGTTAAATTGAACGCACTGGCGCTGGATAAGACCATTACCCAGGATGAG
TTCCAAGAATTACATCAAAAACAGCTATAAGAAAGTTGCTGAAAAACACA
ATAAGCACTGGGACTTTGATCAAAGATCATGATGACCTGATTCAACGAAT
GCTAAAAAATCAGAAGATGCTTCTAGAGAGGATCGAGAAATTAGAGTCCA
AAAGTAGAAACGAAAAGAAATCGAAGAAGATCACAGTTCGAAGGACGACC
AGTATGACATTATCGCCCATTATTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041734XLOC_041734Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066738-proteinTCONS_00066738-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066738-exon-scaffold_459-1575043694:201377..201531TCONS_00066738-exon-scaffold_459-1575043694:201377..201531Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1575043694:201075..201134TCONS_00066738-exon-scaffold_459-1575043694:201075..201134Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1575043694:193292..193419TCONS_00066738-exon-scaffold_459-1575043694:193292..193419Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1575043694:193009..193076TCONS_00066738-exon-scaffold_459-1575043694:193009..193076Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1575043694:192470..192561TCONS_00066738-exon-scaffold_459-1575043694:192470..192561Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1575043694:192244..192341TCONS_00066738-exon-scaffold_459-1575043694:192244..192341Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1575043694:190526..191202TCONS_00066738-exon-scaffold_459-1575043694:190526..191202Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1510915933:201377..201531TCONS_00066738-exon-scaffold_459-1510915933:201377..201531Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1510915933:201075..201134TCONS_00066738-exon-scaffold_459-1510915933:201075..201134Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1510915933:193292..193419TCONS_00066738-exon-scaffold_459-1510915933:193292..193419Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1510915933:193009..193076TCONS_00066738-exon-scaffold_459-1510915933:193009..193076Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1510915933:192470..192561TCONS_00066738-exon-scaffold_459-1510915933:192470..192561Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1510915933:192244..192341TCONS_00066738-exon-scaffold_459-1510915933:192244..192341Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1510915933:190526..191202TCONS_00066738-exon-scaffold_459-1510915933:190526..191202Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1491911889:201377..201531TCONS_00066738-exon-scaffold_459-1491911889:201377..201531Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1491911889:201075..201134TCONS_00066738-exon-scaffold_459-1491911889:201075..201134Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1491911889:193292..193419TCONS_00066738-exon-scaffold_459-1491911889:193292..193419Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1491911889:193009..193076TCONS_00066738-exon-scaffold_459-1491911889:193009..193076Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1491911889:192470..192561TCONS_00066738-exon-scaffold_459-1491911889:192470..192561Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1491911889:192244..192341TCONS_00066738-exon-scaffold_459-1491911889:192244..192341Clytia hemisphaericaexon
TCONS_00066738-exon-scaffold_459-1491911889:190526..191202TCONS_00066738-exon-scaffold_459-1491911889:190526..191202Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_459supercontigscaffold_459:190526..201531 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.60935	1.91562	0	0	10.0253	8.55868	3.58412	3.54561	4.19501	4.71121	5.54791	3.70645	2.75902	2.66021	3.33559	2.95291	5.03262	3.93458	4.8743	4.49286	4.01098	2.18234	2.3212	3.57924	2.67242	2.95749	1.3197	0.383508	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066738 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top