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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066721 ID=TCONS_00066721|Name=TCONS_00066721|organism=Clytia hemisphaerica|type=transcript|length=584bp
CCTAAAGCGGCAGATACGTAAGGTATTTGAGTACATAATTTCACCGGTTT
GGGGACTGTAAAGATCTTCTAACGCCACATGATGGACatttaaaaatgtt
agaaaGGTTTTGAAACACTGTTGTGTGTCAACTGTCTCATATTTGATCGG
TATTAAGATGTGGTTTTGCCAGttgaagattaaaataatttgaatatatt
gcTTTTCTTTCTAGATATTCCAAATGGACTTGCTGAATAATGGTACAGCT
ATCAAGTATCCCAGATCGAGAAGTCAACGCATCGTCATATTGCACATACA
ACATTAATTAGGAAAAGGGACCACTGGGTGAACCGATAATCGAGATCGTT
CTCAGGTAGACATGACTCTTAATTGTCAACTTGACTAAAACACGACAGAA
AAATCGTTTGTTCACCATCGAAGCGCGAAGAACTATGCACCCGACTGCAC
CCGATTGTATCCACGGAGATTATATATataaattcttttattacacccct
atatcagtgacccggtcagctCCACTCAATGATGAATTACCCGGTGAAAG
AAATTGCATAGAACCCAAATCAAAGATCTTATTT Run BLAST on NCBI transcript from alignment at scaffold_459:108279..109080+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066721 ID=TCONS_00066721|Name=TCONS_00066721|organism=Clytia hemisphaerica|type=transcript|length=802bp|location=Sequence derived from alignment at scaffold_459:108279..109080+ (Clytia hemisphaerica)
CCTAAAGCGGCAGATACGTAAGGTATTTGAGTACATAATTTCACCGGTTT
GGGGACTGTAAAGATCTTCTAACGCCACATGATGGACatttaaaaatgtt
agaaaGGTTTTGAAACACTGTTGTGTGTCAACTGTCTCATATTTGATCGG
TATTAAGATGTGGTTTTGCCAGttgaagattaaaataatttgaatatatt
gcTTTTCTTTCTAGATATTCCAAATGGACTTGCTGAATAATGGTACAGCT
ATCAAGTATCCCAGATCGAGAAGTCAACGCATCGTCATATTGCACATACA
ACATTAATTAGGAAAAGGTATTTCGTTCTCGAATGTTTCACCTGGTTTTA
TCGTCATCCTTTATACCATTTTAATATATATCTTTTCTTCTAGTAAAATA
ATTTTGTCATACACCCCTATTTAAGGTCGTTGACTTCTATCTAAAGATAA
TCTCAATAATCTAATGAAGCCCTGAATATACCGCAAAATTAGTttcatga
caatttttttttaattcattcgtTGCCTTTTATAGGGACCACTGGGTGAA
CCGATAATCGAGATCGTTCTCAGGTAGACATGACTCTTAATTGTCAACTT
GACTAAAACACGACAGAAAAATCGTTTGTTCACCATCGAAGCGCGAAGAA
CTATGCACCCGACTGCACCCGATTGTATCCACGGAGATTATATATataaa
ttcttttattacacccctatatcagtgacccggtcagctCCACTCAATGA
TGAATTACCCGGTGAAAGAAATTGCATAGAACCCAAATCAAAGATCTTAT
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066721-exon-scaffold_459-1491911889:108279..108595 | TCONS_00066721-exon-scaffold_459-1491911889:108279..108595 | Clytia hemisphaerica | exon |
| TCONS_00066721-exon-scaffold_459-1510915933:108279..108595 | TCONS_00066721-exon-scaffold_459-1510915933:108279..108595 | Clytia hemisphaerica | exon |
| TCONS_00066721-exon-scaffold_459-1575043694:108279..108595 | TCONS_00066721-exon-scaffold_459-1575043694:108279..108595 | Clytia hemisphaerica | exon |
| TCONS_00066721-exon-scaffold_459-1491911889:108814..109080 | TCONS_00066721-exon-scaffold_459-1491911889:108814..109080 | Clytia hemisphaerica | exon |
| TCONS_00066721-exon-scaffold_459-1510915933:108814..109080 | TCONS_00066721-exon-scaffold_459-1510915933:108814..109080 | Clytia hemisphaerica | exon |
| TCONS_00066721-exon-scaffold_459-1575043694:108814..109080 | TCONS_00066721-exon-scaffold_459-1575043694:108814..109080 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_459 | supercontig | scaffold_459:108279..109080 + |
Blast
The following BLAST results are available for this feature:
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