TCONS_00066693 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066693
Unique Name	TCONS_00066693
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1305

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_458:38287..50565-

transcript sequence

>TCONS_00066693 ID=TCONS_00066693|Name=TCONS_00066693|organism=Clytia hemisphaerica|type=transcript|length=1305bp
AACGAAACGGAAAGTTACGGAAATGGACCATCATTGGGTAGAAGGGAATT
GTCCGGGAAAATGCACGAAGTGTAATAAAACCATTAAAAACAATTGTTTA
ACTGGATTACACTGTGTGTGGTGTTCTGCACAGGTACACAACAGATGTGT
CACCAATATGCCAGTCATGTGTTCGTTAGGACCACACAAAGTTCATATCT
TACCACCAATTTGTATAACCCCTGCATCAAAGGAGAAGGCAGAAAAAGTG
GTGAAAGACAAGAAAAATTCGGTGATAAGTTATGATGGTATACCCATGCA
GATTACTCCGCTACCCGATACCAAACCTCTTATCGCATTCATCAACCCTA
AAAGTGGCGGACGGCAGGGTGCAAGATTACTGAATAAATTCCGCTATTTA
CTAAATCCACGACAAGTTTTTAACTTGGCAGAAGGAGGGCCATTCCCAGG
ATTGAAATTCTTCGCACAAGTACCGGACTTTCGTGTTCTATGTTGTGGTG
GAGATGGTACAGCCGGGTGGATTCTTGCAACGATAGATCGATTAACGAGT
TTGAAACAAAGACCTCCGATGGCCATTCTTCCTCTCGGCACTGGAAACGA
TTTGGCAAGGTGTTTAGGGTGGGGTGGAGGATACGAAGGAGGCAGCTTGG
ACAAAGTTTTACAAAAAGTTCTCAAAAGTTCAGTTGTCATGATGGATAGG
TGGCAGATTGattgtgacaattttgaaaagaCTTCAATCGAAGGAGATAT
AATGCCACAAAATATTATGAATAATTATTTCTCTATCGGTGTTGATGCGG
CAATCGCATTGAAATTTCATTTACAGAGGGAGAAAAACCCTGAAAAGTTC
AACAGCAGGTTTAAGAATAAACTTCGATATTTTCAAGCTGGTACGTCAGA
GCAACTGGCTGCAACATGTACAAAACTAAGCAACTTCTTAGAAATTATTT
GCGATGGCAAGAAACTTGAACTACCCAGTTTAGAGGGTATTGCAATATTG
AACATCCCAAGTATCTACGGAGGAGCGAATATTTGGGGTGAACCGGagaa
gaaaaggaaaaggaGGAAGAAGAGTAGTGGCTCTTCTGGTGATGAACCTG
AATCACTCGGAAGTGTCAGCCAAGATATAAGTGACCGCAAACTAGAAGTC
GTTGGTTTGGAAAATAGTTTATATGTTGGTCAAATCATCGCTGGTGTCAG
ACAACATGGTTTAAGATTAGCACAATGCTCGACTGTTGTTATTAAaatCA
TGAAGACAATGCCAATGCAAATCGACGGTGAACCTTGGATGCAGGCACCT
GCTCA

Run BLAST on NCBI

transcript from alignment at scaffold_458:38287..50565-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066693 ID=TCONS_00066693|Name=TCONS_00066693|organism=Clytia hemisphaerica|type=transcript|length=12279bp|location=Sequence derived from alignment at scaffold_458:38287..50565- (Clytia hemisphaerica)
AACGAAACGGAAAGTTACGGTAAGCTAAAATTCATTTTTTGTTCCTTTTT
ATTTTTGAATAATTAAAATATCATTATATTGACGATTGGTATCTACCTGA
AAAAGGAATCTTATTTTAGCGGGAACTAATTTTCGCACTCGAAAATGAAT
TCGAAAAAGATCGCGTTTCGCGGGAATTGATTTTCGTGATTTTTCAAATT
TTTTGATAAAAAACGTTCAAATTTGTAAATAGCGGTTTCTAATTTTCGCA
GTTTTGCCGAAAAATCGCGAAAAAAGCGAAAATTAATTTACGCAAAAATT
AGTTCCCTCAATGTAATTTTCGACACTCCTCCCATACTTAAGGTTAAACG
TTGATTGGGAAAACCTCAGTAATTCTGTTAATTGTCCAGAAAAAAAATCG
TCATCCCGTAACAATTTTGGTCACTTCTCCAAGATTTTTGACCATTCATG
TTGAAAGTAAAACTATTTTGTATGATTTGTTTCAGGAAATGGACCATCAT
TGGGTAGAAGGGAATTGTCCGGGAAAATGCACGAAGTGTAATAAAACCAT
TAAAAACAATTGTTTAACTGGATTACACTGTGTGTGGTGTTCTGCACAGG
TAGATATTTTTGTTTTCGTTTTGAAATCTCAACTAACAGCTTTTTGTTCT
GAGGTACCAAAGCTAAAATTAGGCGCCCTGCAAAAGATATTCTGTTTTTT
TTGGGCAAGAAATTCTCTTGAATTGCGAGAGAAAAAAAGATTAATATTTT
TGCGGATATAATTTAAGAGACTTGAAAGGGTGAAAGGGTGAAAGGGTGCC
ATGTTCGTTATAAAAGAGCGCCTTTTCTCTTTTAATGAATGCCTCCTAAA
CTGGGCTTACAAAATTATTATGATTTTCCTCTCTCTTAAAATAGCTCCAC
TGGGCGGGGGGGGTGCCCCCTTGCCCTCCCTACCAACACACCACTGATCA
TGGTCCAGTAAGCTGTAAAAGTTGAACTAGTGATGGAAAATGTAAAAACT
CAAAGTTTAAAACAAGTCTATGTAAAATATTTGGTCATCAGCCTAAAAAG
GTCTTAAAGGTTTTGATTTTAAATAAGAGTGATATGGTTTGCTTACTCAT
CAATTTTAATTCAAAAGCTTTTTCACATTGGATTGACACGGATGTGGAGC
AAGATTGGCCAGAAACATGAAAAGAAACGCATTCTTTTGCTCATATCAGC
ATAATGTAACAATAGCANGAAACATGAAAAGAAACGCATTCTTTTGCTCA
TATCAGCATAATATAACAATAGCCAGACACTGTCCTGATATAAAATACGT
GTCTGATATCAAACGGGAACACTTATGTGAAAAACAACCTTTAAGGGCTC
TGGATATACCCAATTTTTCGATTTTACACCAACTTAAATGGCAATTTCTG
CATTTTAAAAAGATTAATGTTTAACCTTTTTTATATGTCATGTTAAACCT
ACCTTTTTAGAATTTAAAAATCGAAAAATTTAAATGAAAAATTAAATGAA
GAAGAAAACGAAGAGTTTTTCGAAGAAGAGTATTTCACCTTTCAAGGCCC
TAATCTCGGTAAAAATCAAACATTTTGGAATTTTTTTTGGTTCAGGTGAT
GTATCTATTTAGTATCTAAAAATACAAATTTGGAAAATCTTTGTGGAAGT
ATCTTTCCTTTAAAATCTCCAAAAAACCTCATTTTGGCAATTTTCTCCAC
TAAATTTACATACGATAACAGCTATAACTTGGGATTTAGCCAAATAGAAA
AATTTTCCGAAAAAAATCTGAATAAAGAAATTATTTGTCATTTAATAACT
TGAAAAAAAATTGAAACAATAAAATGATTTCCCCAAGGAGATTAGGCTTT
TTTTGTGAAAAGTATATGAATAGCGTCGTTATGATGACGTTTTATTAAGG
TGGACCTTGTCACACAAAATTCCTTATTACTCATCATGTAATTACTTAAA
TTCATTTTTTCAAAAGCAGTTTGTTCTTAAACATGTCAAAGAAGCGAAAA
CATTTTCGGTTTTATCTTCAAATTCTGAAATTGATTTTTCACTATGACCC
CAGAGCCCTTAATTTACCTAGTGATTCATGTTCGGAGAACAGCCTTAGAC
TTTTGCACGTGGTAAAATGCAAAATGCAAACATTAGCTTTTAATATTTTT
ATTCAGTCAAATCAAAATCTCATTCCGCCCCCAGGCTTTATTAGAGGCCG
CAATTGTTTCGAGGTTTCCTAGATGAAGATTATTACTTTTTGATTATGTA
TTGATATATGGACCGCTAATTCTCTGCTTTAATGTGCTCACGCAGCACTT
TTGTTCGTTGTAATTTATCCGGTCGTCAACTAGAGAATTTCAGAGGAATA
CGCCTTAAATTGAACGCAAAGGGGACCAGGAAATTGTTGGAGTTTATCTT
GAAAGTTCGAGTTATGGAAAATAATTGTATTTGATTAGCTAAAAAGGTTA
CGTTGACGCGGTGTTTTGACGATTTTGTTTTCTCCATTTTTTGCACTCCA
AAATGAACAGTAATTACCTTTTTAGCATATCTTGTTTTGGAACAAAATTT
TCTTTTTCTTTTTCTTTTTCTTCTCCATATCTTTTAAACAAAGGTGTGTA
GGCTTTTCTTCTCCCGTGCATTAAATTATGCTACATACAAAAAACGCTTT
TTAATTTCAACCGAGGAATGGGAAATTATTTGATTGAAGTTGAAGCTTCA
CTTTTGATTCTCCAATAATTGAGTTGGAGGTATTTTTGGGTATTTTTTGC
GTCCTGTAGATGTCTAGGTGTTTTTAAAGTTCTTTGAGTTTCTACAGGAT
TCCAAACCATATTTCGTTCGGTGAATGTTTACAAAACCGTCATGTTTTAA
TGAGTTAATCAGAGATCTGGGTAATGTCTGAGCAATCACGACCGCGGTCG
ATGGAAACCATTGATTTCAATTGAGTCGATCGAAGAGGACGCCATTAGTT
TAGGTTGAAAGCGTACTGTGAAAACAACTAGCAATTCTTCATATTCATGA
CGTAATCTTTCATACGGAAACACCCGAAAAACACCGGGCGTTTGCCACCA
GTTTTGAATTCAAACAATGAAACTGGTGGCAAACGCTCGGTGTTTTTCGT
GTGCTTCCGTATAAAAGATCACGTCATGAATATAATGAATTCCATTTTCC
TCTTATTTTTTTTGAAAAAAGGGCTAAATCGATTTATAGAGTTTGACCTG
ATTCGATGAATATTGAAAACGAAGTTTCTCTCTCTAGCACTGTTAGATCT
TGCTCGTTTCACGTTTTTGTTTGTCTCATTTCGATTGGTCGTGACACAAA
ATCACGCGAGGGTGTTGTGCTTGAAATGCATGTGGGCGAATTTGATTGAT
GTTGGTTTTTCATTCTATATATTTAAATCATATGTACTTTGCTGTTAATG
CAAATAGTTACTACGACCGAACGGAATAATTAAATGGTTACCAAGGCGTG
CACAAATTAAAATATGAAATCGAAGCGGCGTTTTCAAAGTGTGTTCTTCT
ATTGATAGTGAATTATTTATAATATACTTGTTTGATTTCTCTTGTTCGCC
ATTCTGTGAAACAACAATCGATATATTAAATCGTAATTTCTTATAGATAT
AAAGTGACAAAAATAAATTTCTCTCTGTCTTTGGTCAAAAAATATATATG
AGAAACTGAATTTTGATCGAAATGATAAGTTAACACGAAATTTTAACAAA
AACTCGATTTCCTGGAATTTTTACATTTTTTGAACATTTGTTGACATTGT
TTGGAAATGTCTTGAGTTGTTTTCAAGTCGCTTGAATGCTAGAGGAGGTG
GAGAAGCCAGGCTTGATTGCTGATGAGGTGAGCTGCTTCAAGGTTTATGA
AATGGTTGAAGTTTGCAAAACAAGATAACTGGCTCATAACGGTTTTGTTC
CTTTTTGGACCTACCGGGAGGTCCTTTAATTTGACCGTTGTCCGTTCGTC
TGTTACAAGATTTTCTCGGGATTGGCTCATTAGTTTTTTTTTTATTTTTT
GCACAATGATACAAAATAGCAATGCCTAAAAAGTGACGGAGCCCGATTTT
TGAAAAAAAATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGCTGAAGTAATTTTTCTCG
GAAAATTTTTTTTCGTCGTAAAATACGGATTTTCGTTTTTTGGGGAAATT
CCCTTTTACCATTTTCCTGTTAGCAGATTTTCTAGGGATTGGCTCATTAG
TTTTTTTTTATTTTTTGCACAATGATACAAAATAGCAATGCCTAAAAAGA
AACGGAGCCCGACTTTTGAAAAAAAATCTTTGGGGGCAAATTTGGGCCAA
AAACTACCTAAAAATAAGGTTTTTTGGACTTTGTGCAAAATTTCTTCATT
AGTTTTTCCTGATTTTTGGCAGAAAGATAGAGTGCAAGGCACCCTAAAAT
GTGGCTAAAGTAATTTTTCTCGGAAAATTTTTTTTCGTCGTAAAATACGG
ATTTTCGTAAATTTGGGCCAAAAACTACCTAAAAATAAGGTTTTTTGGAC
TTTGTGTAAAATTTCTTCATTAGTTTTTCCTGATTTTTGGCAGAAAGATA
GAGTGCAAGGCACCCTAAAATGTGGCTAAAGTAATTTTTCTCGGAAAATT
TTTTTCGTCGTCAAATACGGATTTTCGTAAATTTGGGCCAAAAACTACCT
AAAAATAAGGTTTTTTGGACTTGGTGAAAAATTGCTTCTTTAGTTTTTCC
TGATTTTTGTCAGAAAGATATAGTGCAAGGTACCTTAAAATGTGGCTGAA
GTAATTTTTCTCGGAAAATTTTTTTTCGTCGTCAAATACGGATTTTCGTA
AATTTGGGCCAAAAACTACCTAAAAATAAGGTTTTTTGGACTTGGTGAAA
AATTGCTTCTTTAGTTTTTCCTGATTTTTGTCAGAAAGATATAGTGCAAG
GTACCTTAAAATGTGGCTGAAGGAATTTTTCTCGGAAAATTTTTTTCGTC
GTAAAATTTTCAAAAAAAGACGACCAAGTTACACAATGATAAAAGAAAAT
AAATCAGACGTTTTTGCATTGTTCTAAAACTTATTGTGTTTGCTCAATAC
CAATAGTAAAATGTATAACACATAATTTTATCTGATTTTGATCAACAGGT
AGGTCCATTCAGCATGTTGCTTGTTTGTGCTTAATTTTTTCATGAGGATC
AGGATGCAAAGTCTGTTATCTGAGTTGTTTGAGTTTGTCATAGGGCAAAA
GATCGATGGAGAATAATGTCGTATCATTGATATGACGGTCACTGGTGGTT
AAATGGCAATAATATCATGCACTCGTTTTATTAGAACAATTTTATAAGAA
CAATGACGCTCAGAAAGGCCAAAAAATAAGAACAATTTAAAACAAACCTC
AGCCTGGAATGGCTGAGTTTTGAACAAATTAAGAGTTAAAACGGTGGAAA
TAGGGAAATAAGCCAGAAATAACCTAATTTTGCCCTATCCTAAAAATTAG
AACAGGATAAGTAAAAGTGTAAAAAAAAGAAAAAGAACAGCTCAGCCTGA
ACAAAAGTTAGCTGGTTCTTTAAAAAATAAGAGTATATGTACGAAGTTAG
ATTGTTTACGTTCTTTCTTTCTCTTTTAAGGTACACAACAGATGTGTCAC
CAATATGCCAGTCATGTGTTCGTTAGGACCACACAAAGTTCATATCTTAC
CACCAATTTGTATAACCCCTGCATCAGTAAGTACCTACAGTATTGTTTAC
ATGTTAATTAGAGTAAAGAAAACGAGTTTTAAGTTGATTTCATACTCAAA
GTTTCATGTCAGGATGGCAATCTTCAGTGAAAATTGTTTAACATGTTGCA
TATATTTATTGCAATTAATTATCCTTTACATATTACTCTGGATAAAATGT
CACCTCCTATCACATGACATAAACTGCCAGCGACTGATGATAACTTTAAA
CTGCAAACAATATCCTTGACGAACGGTCTTTGTATCGGTTCCTTATATAA
TAAGTATTAGTCTTTTATAGTATTTTTTGCCCCTAACGAACCATCCCTCC
TGAAACCTGGTTAAAGCCAGAGTCTTTCCTGAAAAAATGTTCCTAAAGCA
GGCTGAGGTAAAAAGGCAAAAACATCGTTAGAAACTGAATTTACTATGAT
ATTTTTAGAAGGAGAAGGCAGAAAAAGTGGTGAAAGACAAGAAAAATTCG
GTGATAAGTTATGATGGTATACCCATGCAGATTACTCCGCTACCCGATAC
CAAACCTCTTATCGCATTCATCAACCCTAAAAGTGGCGGACGGCAGGGTG
CAAGGTACAAAGTGTTTAACATTTCATGTGTGTATTTCTTCTGCTTAAAC
ATCTATACCTTATCGGGGAAAACTTCGTCGCGGAAAAGTGACGAAATTTT
GGACAAGTGACGAATATTTTCCCCGACGAAAATTTTCCCCGACGAAAATT
TTCCCCGGCCTTAATGCGTTTACCAACTACCAACAGGTGACGAATTTTTC
CCCGACGAAAATTTTCCCCGACGAAGTTTACCCCGACGAAGTTTACCCCG
ATAAGGTATTCGATTTAAAGATAGCTACAGTGGAGTTTCTTTGACTCTAA
CCTCTAACTAGTATGTCTTGGGCTCTTCCAGAAAATGTCCGTACATGGGG
GTGGAGGATATAGTATCCGAGGGGTTAACTTGCGCTGTTTTGGGGTAATT
TTGATTGTCCATGGGGTCAACTGATGCTTTTCCGGGGGTGCTATAACTGC
TGTCCGGGGGTCAAAAGTCATAATGTCTGGGGGGGTAGATTTCCTAAAAA
TGTTATATCTTCTACCCCTGATATTCAATTTTTTTTCTAAAAAAGCCCCT
GCTTAAACTCAACAAGTTTATAAACCTCATTCCATAACTAGAAATTTCCT
TAATTCGAAAAAAATGTTCCTCTTGCGTGTTTGACTTTATGAAGACTCCA
ATGTGTTAACTTCCAGCGTTGCCTTCATTTCGAAGAGTCGGCTCTTGCTG
TAGGCTGTTCTATGGCAAAAAGCGACAAGAATGGACAGTTGTTTCCTTTG
GAATGCCTTTGAAACTGATTGCAAAAGTTGAGCTTAGCCGATATTTTCCT
TTTTACCTTTTACTTTTGGCTAAACAATTTTTAATATTTTGTTTACAGAT
TACTGAATAAATTCCGCTATTTACTAAATCCACGACAAGTTTTTAACTTG
GCAGAAGGAGGGCCATTCCCAGGATTGAAATTCTTCGCACAAGTACCGGA
CTTTCGTGTTCTATGTTGTGGTGGAGATGGTACAGCCGGGTGGATTCTTG
CAACGATAGGTAAGCATTTCTTCAAGGTTTTTCACCCCTGCACGTTCGCT
GCCGAGTACGAGTATACTTATGGTAGAAGAGTTCCATCCAAACACTACTC
TGTACCGAGAGTGTATCTCACGTTTATCGCTTCGTAGTACACTCTGTGTG
CATTTTCTGTTTGATAAAAAAATTCCCGTACGGAGACCTCTGCGATGAAG
TATGATTTATAGAAAGCAACACTTCTCTCATCGTCTCCCCTCTCTCACCG
GCACTCCCATCACAGCGGTTGGTTTGAAAAATCTCAAATGAGAAAAGACA
ATGACAACAGACCCTCCACGGCAATTGAATTAGCCGTAGATACTGGGTCT
GTGTACAGACAATCCAACGGAATGATACGGAAACATTTGCGTGGATTCAT
ATTTTTTAATAAAACAATGTTGTTTTGCACACACTTTTCCCCTTTCTTTA
TACATTCACCTCATTCTATCCGACATTTTTATTTCCTAATGGTATCGAGG
TTCTTTCGAGTGGTAGGGGTCTCAGTAGGACTGTGACAAATGGTTTGCGA
ACTCGAAATTGGGATGGATCNGTGGTAGGGGTCTCAGTAGGACTATGACA
AATGGTATGTGAACTCGAAATTGGGATGGATTGATTCGCAGTTTTGTCAT
TGTAAAATTTGTTTCCTTCTTTTCTCAGATCGATTAACGAGTTTGAAACA
AAGACCTCCGATGGCCATTCTTCCTCTCGGTAAGAAAAGTTTTTCTAGCT
TTATTTCCACATTTTGAAGCCATTACCAACTAGCTTGATTGTATTCCATG
AAATATGGAAGCTGACTTATTTTTAAGTGTTATATAAGATTTACCGTCCT
AGACGGCTTTCCATGTCAGGTAAGTATATAAATAGGCTTTCCCGTCTCAA
AGTTCAGCATAATAAATTGCTGCGTAAATCCATTTATCGTCTCGAAAAAC
CCTGCTTTCGCCAATGTCTGTTAGACATCGTTTTCAGCATCCTTCTCTTT
TCATCAACATTTTCTCTTTGTATTTACAGGCACTGGAAACGATTTGGCAA
GGTGTTTAGGGTGGGGTGGAGGATACGAAGGAGGCAGCTTGGACAAAGTT
TTACAAAAAGTTCTCAAAAGTTCAGTTGTCATGATGGATAGGTAAGATCG
TCAATATCCTGCCTACTTGTAATTCTTTCTTCTAATGAAAACTTAGTATG
TGACCATCTCCCTGTATGTGTTTGTATTGGAAGAGTTATTGATCATTAAA
ATACACCGAATTCTCACTGTCAGACAAAAATTTTACAGCACTTTTCGGTC
AACGAGTTACTTAAATTTTCGTTACTTCGACATTTAAAAGTTGTTTTTTC
CCTTTAAACAGGTGGCAGATTGATTGTGACAATTTTGAAAAGACTTCAAT
CGAAGGAGATATAATGCCACAAAATATTATGAATAATTATTTCTCTATCG
GTGTTGTAAGTCTTCTTGTTTTCTTCCTCTTTATTTCAGTCGTTTATCCG
TACTAGTGGCCGGGAAGCTCAGTCGGTAGAGCATTCGCCTTAAAATCTAA
GGGTTGTGGGTTCGATCCCCGGTCACCGCCAACTCAGCGGATGAGTAGCC
TAGATTGGGTAATCTGATCTAGGCGGTAAGTCACTGGGAGCTGAGAGTTG
GTGTGGTGCTCCGCCTCAGCATTCGATCTCCCAGGTCTAGCGCAAATAGA
AAAGGGGATAGACTCCCTCACTCCCGGCTCTGTCGACAGCCACCAGATGA
ATATACTTACTTAAATTAGCTAGGTGAATTCAAGATGTGGGAGTTTCTTT
CAAACTCCAATATTCCTATGTACTTTTCACTTGTTTAACATTTTTCCAGT
TTGGAAAGCTAGACCCTCTATCTATAACCCTCTCTCAAAATTATCTTCAT
GTTCACTTTTTTTAGGATGCGGCAATCGCATTGAAATTTCATTTACAGAG
GGAGAAAAACCCTGAAAAGTTCAACAGCAGGTAATGTGTCGACTTGGATC
GTTTATTATTCGGTGTAATACAGTAATATCGGGGTAATATGAGTGATATG
AGATGATACGATGGTTGTTACAGGATAATATTAGTTTGTATAAATTACTA
CAATGCNTGATATGAGATGATACGATGGTTGTTACGGGATAATATCAGTT
TGTATAAATTACTACAATGTCAGACTAGATCTTGTGGATTACTTCAATCT
GTCTTTACATATTGTAAAGTAGTATCACTTCTTTTGACTAGAACGTATAA
CAATAAGCATTACTTTAGACTTAGTTGATTTCTGTAAGCGTAACGTAAAA
AGTGTAATTTGAGGCTCTGTGGCGTTTTATATTGTTAGACATCATACTAC
ACTACTAGACAAATTTTATGATTATAATCATTGAAATTTTTTTACCCATT
TCTCCTAAAGTTCTTAACCAAATACTTCTTAACCTTTTTGGACCTACCCC
GGTGGAGGTCCTATAAATTAACCTGTGTTTGTTCGTCCGTCCGTTCGTCC
GTTCGTTCGTTCGTTCGTCTGTTACCAACTTTTCTCAAGATTGAATCATA
GGAATCTTTTGATTTTTGGTAAAAAGGTGCAAAATGGTAGTAGCCAAAAT
GTGACGGAGCCCGATTTTGGAAAAAAAAGATTTTTGGGCCAATTTGGGCC
AAAAAACGGCTAAAAAACGGGTTTTTTAGACTTTGTGAAAAATTGGATCA
TTAATTTTTTCTTNTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTCATT
CTTTATGATTTTTTGCACAAAGATGCATAACTTTAAACCCTTAAATGTGA
CGGAGCGTGATTTTCGAAAAAAATGTTTTTGGGCAAATTTGGGCCAAAAA
ACGGCTAAAAAAAGGGTTTTTTGGACTTTGTGAAACACTGCATCATTGTT
TTTTTCAGATTTTTTACATGAAAGTAGGTAAAAGATGGCTCAAGCAGATT
TTTGTAAAAAAAGAATTTTTCAGCTAAAAAAACGCATATTTATTTATAAA
AATCACTATTAATAAGCATACATCAATGTTCTTAGCCAAATTACTCAATT
TTTTAATGAGAAAGATGTTTTTTTTGCTCACAAAGTCTTGAATATGAAAG
ATTATTTCAAGAGCATGAAATTTTGGTTTCTAAACGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTGTTCTGAATGATTGTTTAACGGTCATGCTC
ACGTAGATATCAATTATATTTGTTAAATGCATAACCAGGTAGGTCCATAA
AAGTATCACTTGTTCTTTTCAGGTTTAAGAATAAACTTCGATATTTTCAA
GCTGGTACGTCAGAGCAACTGGCTGCAACATGTACAAAACTAAGCAACTT
CTTAGAAATTATTGTAAGTAAAAAATGTTCTTTTTTATATCGACAAGAAT
TTTTATATAATATTATCATTCTTGCTTTCTTCTCGAATATTTGGGATAAG
AATGTCTAATTGAAAGACACTCTATATCCACTTCTGTTTTCTTTTCCGGA
TTTGGTAATCGGAATTTCACTATACCGGGTATTAGTATGTAATCTTGTAT
GATGTTATTCTATATGGATGAAAAATCCAGATAGTTAATCTGACCTTGAA
TTCAAGAATGGAATTTTCATTATTTTGCCCTTTCCCTCTGGCGAGTGAGT
TTTATAAAAGAGTGCAATATTCAATAATTTCTCGCCTTTTTTTTAGTGCG
ATGGCAAGAAACTTGAACTACCCAGTTTAGAGGGTATTGCAATATTGAAC
ATCCCAAGTATCTACGGAGGAGCGAATATTTGGGGTGAACCGGAGAAGAA
AAGGAAAAGGAGGAAGAAGAGTAGTGGCTCTTCTGGTGATGAACCTGAAT
CACTCGGAAGTGTCAGCCAAGGTTTGTTTCCGTATTTTTTATCACCGTTT
TAAGGGTTCAATCGTGGCATGCGTTTCATGTTTGCATTTACCGGTCTAAA
TACTCAGATTCAAAATTTGCCAGTTTGGCAGAAGAAGGATGGGCTCTCCT
CAATTTCAAACTTTGTTTTGCTTTTATTTCCTTCTGAATCGCATTAATAT
TCTGTTCAAAACTCATTATGGGGTTTCAAAGCGGCCAATACCGTTACTGG
CTGTTTCTGGATAACGCCTACTTTGAAAACGAGAAATTTAAACCGTTCAA
AGCTTCTAAATTATACTTTCCCCGAGGTAGGCATTCACGAAATTCATAAA
TTTTGTTCGCATTCTATTTTAGATATAAGTGACCGCAAACTAGAAGTCGT
TGGTTTGGAAAATAGTTTATATGTTGGTCAAATCATCGCTGGTGTCAGAC
AACATGGTTTAAGATTAGCACAATGCTCGACTGTTGTTATTAAGTATGTT
TCTTTTTGTTGAAGTAGACCCTTCCTGCTTTTGAAACTTACTCAAACATC
TTTTTCCAAACATCTTTTCTTCTGAAATGAGAAAAATCAGAAAGTAGCCA
TGTTATTTAAACATTGTGTTACAGCCAACCATTTTATTGACAGCTTACCA
ATGCCTAGGCTGCACGCATCCCCTCTGATATGATTTGATATAACAAAATA
AATTCTGGGGATGCGCGCAGCCTAACCAACGCCATATTAACGTCTATAAT
TTTCATTTTCATTTTTTAGAATCATGAAGACAATGCCAATGCAAATCGAC
GGTGAACCTTGGATGCAGGCACCTGCTCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041707	XLOC_041707	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_458	supercontig	scaffold_458:38287..50565 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.830455	11.3267	9.87335	4.12256	8.71324	10.6297	5.7679	1.75947	1.15463	4.62712	2.84455	12.1322	14.5025	2.07838	1.88649	2.60209	0.632365	2.65733	1.00588	1.23472	0.378235	0.0572452	1.20536

Blast

[Close]

BLAST of TCONS_00066693 vs. Swiss-Prot (Human)
Match: DGKB (Diacylglycerol kinase beta OS=Homo sapiens GN=DGKB PE=2 SV=2)

HSP 1 Score: 411.379 bits (1056), Expect = 4.941e-135
Identity = 244/469 (52.03%), Postives = 318/469 (67.80%), Query Frame = 2

Query:    2 TKRKVTEMDHHWVEGNCPGXXXXXXXXXX-XXXXXGLHCVWCSAQVHNRCVTNMPVMCSLGPHKVHILPPICITPA-----------------SXXXXXXXXXXXXNSVI-----------SYDGIPMQITPLPDTKPLIAFINPKSGGRQGARLLNKFRYLLNPRQVFNLAEGGPFPGLKFFAQVPDFRVLCCGGDGTAGWILATIDRLTSLKQRPPMAILPLGTGNDLARCLXXXXXXXXXXXXXXXXXXXXXXXXMMDRWQIDCDNFEKTSIEGDIMPQNIMNNYFSIGVDAAIALKFHLQREKNPEKFNSRFKNKLRYFQAGTSEQLAATCTKLSNFLEIICDGKKLEL--PSLEGIAILNIPSIYGGANIWGEPEXXXXXXX-----XXXXXXXDEPESLGSVSQDISDRKLEVVGLENSLYVGQIIAGVRQHGLRLAQCSTVVIKIMKTMPMQIDGEPWMQAP 1300
            +KR    M H+WVEGNCP KC KC+KT+K    LTGLHCVWC   +HN+C +++   C  GP K HILPP  I P                  S  K EK    + N VI           + DG  +Q+TP+P T PL+ F+NPKSGG+QG R+  KF+YLLNPRQV++L+  GP PGL FF  VPDFRVL CGGDGT GW+L  I++  ++ + PP+AILPLGTGNDLARCL WGGGYEG +L K+L+ +  S+ +M+DRW+ +    +K   +GD +P +I+NNYFSIGVDA+IA +FH+ REK+PEKFNSR KNK  YF+ GTSE  +ATC KL   +EI CDG +++L   SLEGIAILNIPS++GG+N+WGE +K+R  R+         ++  + + L   SQD+SD+ LEVVGLE ++ +GQI  G++  G RLAQCS VVI+  K++PMQIDGEPWMQ P
Sbjct:  301 SKRNTDVMHHYWVEGNCPTKCDKCHKTVKCYQGLTGLHCVWCQITLHNKCASHLKPECDCGPLKDHILPPTTICPVVLQTLPTSGVSVPEERQSTVKKEKSGSQQPNKVIDKNKMQRANSVTVDGQGLQVTPVPGTHPLLVFVNPKSGGKQGERIYRKFQYLLNPRQVYSLSGNGPMPGLNFFRDVPDFRVLACGGDGTVGWVLDCIEK-ANVGKHPPVAILPLGTGNDLARCLRWGGGYEGENLMKILKDIENSTEIMLDRWKFEVIPNDKDE-KGDPVPYSIINNYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSATCKKLHESVEIECDGVQIDLINISLEGIAILNIPSMHGGSNLWGESKKRRSHRRIEKKGSDKRTTVTDAKELKFASQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSCVVIRTSKSLPMQIDGEPWMQTP 767

The following BLAST results are available for this feature:

BLAST of TCONS_00066693 vs. Swiss-Prot (Human)

BLAST of TCONS_00066693 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
DGKB	4.941e-135	52.03	Diacylglycerol kinase beta OS=Homo sapiens GN=DGKB...	[more]

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TCONS_00066693 (transcript) - C. hemisphaerica

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