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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066662 ID=TCONS_00066662|Name=TCONS_00066662|organism=Clytia hemisphaerica|type=transcript|length=882bp
CCAGTTGAGTTTGCTTCTTTCACACTGTACTTTACTTCTCCAGTGAAGGA
GAACAAGCCAGTCTCGAAAGGAGAAGAATGAATGTTTTTGCTGACCAAGG
GGTAACTCAAAGTTGGGTGGCTACTTTAGAATTCTATAAACTTTAGGGGT
ACCACCTCTGAGCCCTGGAGGACCCTATGGCAAAAATAGGTGTCTGGTAT
GATTTAGCAACAAGGGTTGGCTTTTTCTCTTTGCCTGGTCTTTCTTAATG
TTACCAATACaaacaaagtcaaaaaaccaaagaattttttttcattaagg
GTCATCTTTTATAAAGCAAATTAGTCCCTCGTGCCAGCAAAAATCAGTCC
CATTAGGTTAGAGTATACCAATTTGTATTTTACGACCCTTGGAAGTTATG
AACGTATTTTTTTACCTTGCGCATCTAGTCCGAGAaccaaatcctatatc
tccttaaatataagcacttttgcttaacccaagattctacagaataaact
atacatttttggaatcctcaaatatcctggtcaattttttatACTGTGCT
CGAGTtcagggggtactttttaccctttgtaaggatttgttaaggaaaac
aTCCTTATatgtatgatataatttgctatatctcatgagtaaattgacca
attgctatgaaactttgccaaaagtttcaagatagattggtgatcatcat
tggtaaaaaaattttgcgaaaaattatttttgagggTTTACCTGGGGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNTCAAAcctatgatttactaatgatt
atttactgacgattacctcggaatcgtatgttttgtcgtgcaattaacga
ttaatcactcgtaacatgCGATACACCAGAAA Run BLAST on NCBI transcript from alignment at scaffold_457:64443..65324 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066662 ID=TCONS_00066662|Name=TCONS_00066662|organism=Clytia hemisphaerica|type=transcript|length=882bp|location=Sequence derived from alignment at scaffold_457:64443..65324 (Clytia hemisphaerica)
TTTCTGGTGTATCGcatgttacgagtgattaatcgttaattgcacgacaa
aacatacgattccgaggtaatcgtcagtaaataatcattagtaaatcata
ggTTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCAGGTAAAccct
caaaaataatttttcgcaaaatttttttaccaatgatgatcaccaatcta
tcttgaaacttttggcaaagtttcatagcaattggtcaatttactcatga
gatatagcaaattatatcatacatATAAGGAtgttttccttaacaaatcc
ttacaaagggtaaaaagtaccccctgaACTCGAGCACAGTataaaaaatt
gaccaggatatttgaggattccaaaaatgtatagtttattctgtagaatc
ttgggttaagcaaaagtgcttatatttaaggagatataggatttggtTCT
CGGACTAGATGCGCAAGGTAAAAAAATACGTTCATAACTTCCAAGGGTCG
TAAAATACAAATTGGTATACTCTAACCTAATGGGACTGATTTTTGCTGGC
ACGAGGGACTAATTTGCTTTATAAAAGATGACccttaatgaaaaaaaatt
ctttggttttttgactttgtttGTATTGGTAACATTAAGAAAGACCAGGC
AAAGAGAAAAAGCCAACCCTTGTTGCTAAATCATACCAGACACCTATTTT
TGCCATAGGGTCCTCCAGGGCTCAGAGGTGGTACCCCTAAAGTTTATAGA
ATTCTAAAGTAGCCACCCAACTTTGAGTTACCCCTTGGTCAGCAAAAACA
TTCATTCTTCTCCTTTCGAGACTGGCTTGTTCTCCTTCACTGGAGAAGTA
AAGTACAGTGTGAAAGAAGCAAACTCAACTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066662-exon-scaffold_457-1491911889:64443..65324 | TCONS_00066662-exon-scaffold_457-1491911889:64443..65324 | Clytia hemisphaerica | exon |
| TCONS_00066662-exon-scaffold_457-1510915933:64443..65324 | TCONS_00066662-exon-scaffold_457-1510915933:64443..65324 | Clytia hemisphaerica | exon |
| TCONS_00066662-exon-scaffold_457-1575043694:64443..65324 | TCONS_00066662-exon-scaffold_457-1575043694:64443..65324 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_457 | supercontig | scaffold_457:64443..65324 . |
Blast
The following BLAST results are available for this feature:
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