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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066647 ID=TCONS_00066647|Name=TCONS_00066647|organism=Clytia hemisphaerica|type=transcript|length=560bp
CGCACATTGAattaaaacagcaaaaaatccaCTATAAAACTATAACAtag
aattatttatttttcttttctttcatccTCGACGACATACTTTTTATATA
TCGCAGTTCTTCTCCACTTATACAAttGAAGCGTTTTGTTTGCTATTTGG
CATTGCATTGTTTTGCACCTTGTATACAGAAAGAGTGCAATCTCTAAGCT
TGGATGTTTGATTCTTGGAGATAGACAGTTGGCACAGCCGGCCGAGCCGG
GGATTTTCGTAAGCTTTTATTCTGCTATTCACGTTAGGTACTACCCTTCT
AACACCTTCCAAACATAGATGATGCGATAGCGTTCCCTTCTCCTTTGCAG
GGAATAGATTTTGGATTGCTTGAGACACTCCCAATAATTGTTTGAGGTGC
CTTTTATCCTTCttagaaatgatttttgaatgTCTTCAAGTCTCTGAATG
AGACCGGCAGTATTTGGACTCTATAAAACGGAGCAATATTCTAAAATTGG
TATCACCAACGATTTGTAGAGTGTAATACATTCAAATGACCGTGATGAAA
AAGTTCACAG Run BLAST on NCBI transcript from alignment at scaffold_457:74237..75688- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066647 ID=TCONS_00066647|Name=TCONS_00066647|organism=Clytia hemisphaerica|type=transcript|length=1452bp|location=Sequence derived from alignment at scaffold_457:74237..75688- (Clytia hemisphaerica)
CGCACATTGAATTAAAACAGCAAAAAATCCACTATAAAACTATAACATAG
AATTATTTATTTTTCTTTTCTTTCATCCTCGACGACATACTTTTTATATA
TCGCAGTTCTTCTCCACTTATACAAGTAAGTAATCTTTTATGATATCATA
ATTTATTTAAAGTTTGTTATATACTCAAACCAGGGCAGAGAATGGCATAC
TTAGAGTCCCCTGCCCAATGTGGGACCGAATGTCTTTGTTTGAACCAAGA
AAAGTCATACACAAACAAACCTTTGGAGAATTTCTTTTGGTAGTTATCTG
CTTTGACCTATTTCCCGTACTGTGTAAAAAAAGTTCTAGAAAAGAGCGAG
TAGAATCTGAAAGGTCCAATTTTGCACGAAGCACACGAAACCCCCTTTTT
CGAAAAAAATAAAAAATGGCTACCTAGAAACAAAAAATCTTTGTGAGAAA
GTATGAGTATATTAGAAAGCATTTCAGTAAAAATCAGCTCGATACAGTTT
TCTTCTTACATGAAATACTGAAATATTGATAAAAAAGTTGATGAAATCAG
CTTCGAAATTTGACGTCCAGTCTCCAACCGACCAAACTTATGAAAAAGAA
TACTCTACATTGCGATCAAAATATTCCAGACGCTGAGAAAAAAAGATGAC
TTTACATTGCGATCAAAACATTCAAGGGGCATGCCTAGTGACTCCAGAAG
TCACGAACTTTCGTTTGACGTCAAACCAAATGTTTCATTTTTCCGTGAAC
TTTGAACCCTTCTAACTTTTTTTCTATGTTACTTATTTGTGTTACTTGTG
TAGGTGTAGGTGTTCAAACAAAGTGCTCAGGTAAGATTCTTGATGAACCA
CGGCTCTGTTTGATCAATCTGTTGAGGGGAAAAAGAATCTCAGCAGATAT
TTTTCATGTCAAGTATTGAGTTTGAATTAGCTCTCCTGCACCCAGTATAT
CCATAAATTTGGGGTTCATCTGGGATTGACTTCAAGTGAGTGTCAAGGGC
ATTTTTATATTTTTCAGTTGAAGCGTTTTGTTTGCTATTTGGCATTGCAT
TGTTTTGCACCTTGTATACAGAAAGAGTGCAATCTCTAAGCTTGGATGTT
TGATTCTTGGAGATAGACAGTTGGCACAGCCGGCCGAGCCGGGGATTTTC
GTAAGCTTTTATTCTGCTATTCACGTTAGGTACTACCCTTCTAACACCTT
CCAAACATAGATGATGCGATAGCGTTCCCTTCTCCTTTGCAGGGAATAGA
TTTTGGATTGCTTGAGACACTCCCAATAATTGTTTGAGGTGCCTTTTATC
CTTCTTAGAAATGATTTTTGAATGTCTTCAAGTCTCTGAATGAGACCGGC
AGTATTTGGACTCTATAAAACGGAGCAATATTCTAAAATTGGTATCACCA
ACGATTTGTAGAGTGTAATACATTCAAATGACCGTGATGAAAAAGTTCAC
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066647-exon-scaffold_457-1575043694:75564..75688 | TCONS_00066647-exon-scaffold_457-1575043694:75564..75688 | Clytia hemisphaerica | exon |
| TCONS_00066647-exon-scaffold_457-1575043694:74237..74671 | TCONS_00066647-exon-scaffold_457-1575043694:74237..74671 | Clytia hemisphaerica | exon |
| TCONS_00066647-exon-scaffold_457-1510915933:75564..75688 | TCONS_00066647-exon-scaffold_457-1510915933:75564..75688 | Clytia hemisphaerica | exon |
| TCONS_00066647-exon-scaffold_457-1510915933:74237..74671 | TCONS_00066647-exon-scaffold_457-1510915933:74237..74671 | Clytia hemisphaerica | exon |
| TCONS_00066647-exon-scaffold_457-1491911889:75564..75688 | TCONS_00066647-exon-scaffold_457-1491911889:75564..75688 | Clytia hemisphaerica | exon |
| TCONS_00066647-exon-scaffold_457-1491911889:74237..74671 | TCONS_00066647-exon-scaffold_457-1491911889:74237..74671 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_457 | supercontig | scaffold_457:74237..75688 - |
Blast
The following BLAST results are available for this feature:
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