TCONS_00066640 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066640
Unique NameTCONS_00066640
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2745

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066640 ID=TCONS_00066640|Name=TCONS_00066640|organism=Clytia hemisphaerica|type=transcript|length=2745bp
AACCTATTCATATCAAtgtattaatcatttttttcaaaatggtaaaaatt
aaTACTCTTTAACTATAGAAGTCTGATTTTCAAGAAAGAGAGATAGAAAG
AGATTCATTTCCAACAGTACCTAGTACCCAATAGTAAAATAGGCAAAATG
AAGACTATTTTACTCATAAATGTATTAATTTTGGTCAACATTTGTCATTG
TGTGACTTACACATACCCTGGCAAAGGATTCACGAAATTTCCAATCTTGA
AGAGTAGCCAAACCACTAAAATATCTTTCGAGTTTCAAACCTCATCATTA
GAAGTAGAGAGAAGCTTATTGTATGTGGATAATGTGCGTGGTGGTGGGAT
GGAAGGCGATTCCATGCGTGTTTGGTTGGATGCAGGAAGATTGAAAATCG
CTTGGAATGTTGTCAACGGTAATTATAGAGATGGTGATATCAAGGAAGTT
GGTCACAACTTGGACGATAATATCAAGCATTATGTTGTCATCGAACGTTT
TAACGGCAAACATTTTGTTGTTAGAGTGGATGGGGTTGAATCAAGACGAA
GTTTTTCGAAAGCAGTTCGTTTCAATTCGGAAGTGTACTTGGGAGGCTGT
CACCCTGATCCTACCAAACGTACTCTTCAAAGAGATCCTTATTTCTGCTT
CCAAAACGGgTTCATAGGTTGTATTAGTGGTTTGAGATGGTCCACCGAGA
GTGAAGAGGATGAACGAACTTTCAAACCCATTGAAACGTATAATGTCACG
AAAGgCTGCACCAATAGATGTTTGACAGACCCATCGTTTTCATGTTCAAA
TCGTGGACGTTGTTTGAACCAATACATCAAGACTGGATGTGACTGTCGTG
GAACTGGCTTCACTGGAACCACCTGCCAAAAACCCAAATTAGCAGTCACA
TTTTTTGGTGAGCAGTACGTCACATGGGTACCACAAACCAGCATGAATAG
CCTAgtgacaaatatttttgttcgcTTCAAAAGCAATCAACCTTCAGGAA
TCATTTTGTTCATCACTGGACAAAGTACAAGTGAATTCATGTTATTGGAG
CTTTATGAACGTACTTTggtcctgaaaatgaaaataaatgGTTACGATGA
GAAAGTGTTCAAAATCCccaaatcaaccaatgagaaagCAGAACATTGGC
AAATGGTATCCTTCTCAAGAATGGGCGCCAGCATCACTATAGCAATGGAC
GATGGTGTTCATGAATACACCAACTCAGTCAAGCAACTGGAGAACAAAAT
AGTTCAAGTGAAATTCATCATCAGAAAGATTTACTTTGGTGGTGTTGACA
AGCTTCAATATGGTGATTTTGCTCTTCGGAAATCTGAAAGTAAAATCAAT
TTCATTGGATGTCTTCAAAATGTTGATGTAAATCAGTTTGATCTTGTGGA
GAACATAGCAAGTCGTTCACCAAATGACAAGTCAATCAGCTTATTTGGTG
GATCTCTTCAGAAAGGCGCTTGTAAAGTATTACCAGTTATAGGTAGTAAA
CAGACACCAACACCACGAGTAGAAGAATTCATTACACCACACCCTTTCAC
CGAAACATTGCATAACAAGACACTTAGTAACCTTTTGTCTGCACAGAATG
ATGAAGAAGATTCCAAATCCTTGTTGTGGATCATCGTCGGGTCGTGCGTC
AGTTTGATCGTTTTGATGATCGCCGTTTGTCTCGTCGTACGACATGTCAA
GAAACGTAAGGAAGAACATAGACGATATCGTGATCATTATCTTCGACAAA
CCGCTATGCGTGTCGAAAGAGAAGATTTGTTACCGACCGAAAAATGTATC
CGTGATGAAGTGGAGAAGCGTAACATGCAATCTTTCAGTCCGTTACGTAA
AGAGTTTTANGATGAAGTAGAGAAACGTAACATGCAATCTTTCAGTCCGT
TACGTAAAGAGTTTTACGTAGCAACGATGTCACGCGCCGGAACTCTCCAA
CGTTCCGTGCATCACGAACCAATCTACCAATCACACGAAGTTTTCCATCA
CGCTCACCCTTGTCTTGGTAAAAATTACGCTGTACCAAGTATCAATACGC
CGCAACGCTCTCAAAGCCCCGCATCATCTAACTACGGGACGTCACGTAAA
TGCAGCCACGCGTCTGCACGTTACCAAACACCTAACGTAAACGTCAACGC
CGCTGCGCCTGAATCGATTAAAAGCATGAGTTCCAGTTCCGgactttgaa
aatgaattatTAGAAATAATTGAAAAACTTAAGATGTTGAGTCCAGTGTT
GGTTGAAAAATCTAAATGATCTACTCAGGATTACTATTTTTACAAGGGCT
TACAAAGTTAGAACATTTTGTGGGTACGGGTTGGCAACGATGACCTTGTT
AAAGAGTTACCATGTTTGTCTATAACTGAGTTGCTTAAATGGAAATTCGC
ATGTTGTATCATGTTCACGATCTAGGGCTTGGCAACAAATCACGGTGGAT
GTCACATCGAAATCAAATACTATAACTATGATCGTTTACTTCCATAGAAA
GTTTACGGATATAAAAAACACTTTCTTTAATAAATTTTGGATCCTCCTTA
GTTCCAATGGTAAGAGATGGGATGAAACGGCTGAATCCTATTCCCTCAAA
GTCTGGGTTATATTTTCTGTATTAatcttcttaaattttattNCGGCTGA
ATCCTATTCCTTCAAAGTCTGAGTTATATTTTCTGTATTAatcttcttaa
attttattttccaacCTTTTCCTATTGTGAGACTTCAAATCAACT
Run BLAST on NCBI

transcript from alignment at scaffold_457:226798..236883+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066640 ID=TCONS_00066640|Name=TCONS_00066640|organism=Clytia hemisphaerica|type=transcript|length=10086bp|location=Sequence derived from alignment at scaffold_457:226798..236883+ (Clytia hemisphaerica)
AACCTATTCATATCAAtgtattaatcatttttttcaaaatggtaaaaatt
aaTACTCTTTAACTATAGAAGTCTGATTTTCAAGAAAGAGAGATAGAAAG
AGATTCATTTCCAACAGTACCTAGTACCCAATAGTAAAATAGGCAAAATG
AAGACTATTTTACTCATAAATGTATTAATTTTGGTCAACATTTGTCATTG
TGTGACTTACACATACCCTGGCAAAGGATTCACGAAATTTCCAATCTTGA
AGAGTAGCCAAACCACTAAAATATCTTTCGAGTTTCAAACCTCATCATTA
GAAGTAGAGAGAAGCTTATTGTATGTGGATAATGTGCGTGGTGGTGGGAT
GGAAGGCGATTCCATGCGTGTTTGGTTGGATGCAGGAAGATTGAAAATCG
CTTGGAATGTTGTCAACGGTGACTATATATTGATTTAAAACCTAGATCAT
TTTAATGAGCTTGGTCATGGTTTAAACACTAGAAAAGTTTCGTGACTTTG
ACAGGCCCATCGGAAACGGGAAGACTGGGGAGACTTAAGCCTTCCCACTT
TTGaccaaatgagattttttctcaaattcctagcaaaCTTCATTTCAATT
GAGACTTCAGCCTTCCCACTTTAACGGTTGTTCCGCTGGGCCTGTTTGAC
TCACGGTAAACATAATTTTGAGGATAACAAATTTTAGGAATTTAGTTATT
AGTTTAGCGAATAGAGTGATGAATTTAAATTAAAGGTTGTAGGTTCAAGT
CTGAAGTAGCAAGGGGACGAAATAAAAAACCACAACTTATCGTTAAAATG
GCTATCCGTTTTGCTGTTACTTACCTGTTATTATCCTTGTAAAGCTTTCA
AAGTGTTAAACTTCAGTTAAGGTTTTATTGAGTCGAACCGAGACCTCGTG
AAACTGATACGACTGATGCgtttccttttcttctttcattttgttCAGGT
AATTATAGAGATGGTGATATCAAGGAAGTTGGTCACAACTTGGACGATAA
TATCAAGCATTATGTTGTCATCGAACGTTTTAACGGTATAGAGTTTAATT
TCAATGAACAGGACCTATCCAAATTGTTATAATGATCTCTGGAAGTTCta
gattttaaatttcaaaaaaattagatcAACATTTAAATCGTTTTTCCGAG
CACTGATTGAGCAATGCGACTGAGTTAAACACGAAAAAGATTTCCCGGTT
GCGGCCATTTTTGAGAACAAGTTACCTTCTATCTTtctggaaaaatcaga
aaaatctagTGAGTAAATTTTGCCTATATATTGTTTTGGACCAAATTTGC
CATAAAACCCCCTACAAGGGAAAATTTCGACAAAGTGTTTTCAGGGTTTT
TGGGACTTTTTTGACACGAAAGGTTCATGATGAATGAGAGTTGACCAGGc
aaattgatttgaattttgAGCGAACTTTTTGAAAGATATCCCTAAGAGAA
GACAAGCAAATTCAGAAACATGAACAAGTTCAATCTCAAAAGGTCCCATG
ATTATTGTCTGCAAAATTTCTGATACCGAATATACTGTAACCATGTTAAT
GAGGATAAAGGGAGATTTTTGGTTTATAGAAAATACCTATTACTGTAGTC
AATGCTAAACAAGGTaactttttttactttatagGCAAACATTTTGTTGT
TAGAGTGGATGGGGTCGAATCAAGACGAAGTTNCCTTTTTAGGCAAACAT
TTTGTTGTTAGAGTGGATGGGGTTGAATCAAGACGAAGTTTTTCGAAAGC
AGTTCGTTTCAATTCGGAAGTGTACTTGGGAGGCTGTCACCCTGATCCTA
CCAAACGTACTCTTCAAAGAGATCCTTATTTCTGCTTCCAAAACGGGTAA
GAAAAATCCTCTTTCTCACGGACCGGGTTATAAAAAATTGTAAGCAGGTC
ACACCAGGACAATACAAGATAAGATTTTAACCGTGTTGTAACTTTTCCGT
CTGTCCGTCTAGTTGGAATTTCTAACAAGGATTTTTGTCTCAAAAAAAGG
TCTTTCAAAGACAAAGTATCTAAATAAGGTCTTGTTGAGACATTTCATTC
ATACTCACTAACACTGTATTATATCTCAAATTCTTCATCTGATTTTCTTC
TATTTGAAACACTGCCACTGTCATATatcttctcaaattttttttggttt
gcaggTTCATAGGTTGTATTAGTGGTTTGAGATGGTCCACCGAGAGTGAA
GAGGATGAACGAACTTTCAAACCCATTGAAACGTATAATGTCACGAAAGG
TATGGGTTAAGAGTCGACCATGTTATCATTTTGTCATTTCGAAGTAATAC
CAGCGGTGTAAAAAATAATCTCTACATACTTTTCATTCTCCAAATCTAAT
GTGTAAAAGCTATCATAAGCAACGCATAGCTTGCaaagaataacttttga
ttgaaatatacATGGAAAGTTAACCATGtcattcttatattttagctgAT
TTGGCTCCTATTTCCAATGTATAAAAAAATCTAATCCCACTTGAAAAAAA
ACCGTTGCAACGGAAATTTTTGATCTTGTGTTTTGTCTGTCTGGAACTAT
TAAAGGTCTAAACATGACccataaaaaagtattttccgAAATCATGGGTA
AACCGCAAGCAAAACCGCAAAAAGTCAGTCaatctttgaattttttaggC
TGCACCAATAGATGTTTGACAGACCCATCGTTTTCATGTTCAAATCGTGG
ACGTTGTTTGAACCAATACATCAAGACTGGATGTGACTGTCGTGGAACTG
GCTTCACTGGAACCACCTGCCAAAAACGTAAGTCTTTCTCTAATTACCAG
GATGGTTGTCAGCTATGTGATCTTTTCACATTCTAGCTCTATGACGAAAT
AAACGatgacatttttttataaacctACCAACAATATTTACCAGAATCAC
ATATCACGCACACCACGCTTGGTTTCTTTATTACACAGAAGggggggttt
tcaggggtcttaaataccgtcataccgacaagattttgggtcaaataccg
taataccgtcggtgaaggaagcctaataccgacaccgatattatatttat
gttttttttctcgaaaataatgaattttcagttatcaaatctattgtgta
gtaacaaatgaGAAATTGTACAAACAAGTTTTGTACTTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAGATTCTTTTAGAACTactggatgcagtatttgcatcacaaa
agttgtcattaccgcagaaaaataacaaaaattgtttagttatcgtaaag
ttttgcttattttgaatcaCCAGGACAATAACTCAATAGGACATCctaga
ttgtgcgagcgaagcgagcaagaaaattttactggttaaaatagcggaag
agacttatcttttttgaaaatttttctgcatgaaactcatgaagaaacta
aaaggtaaatagttttataccgaaataccgtttttcattgataaaaatat
cgaaataccgacaaaaaaacaggcaatttaccgataccggtaaaaaatga
aataccgtaatcccgtcgtttttttctcgtaataccgatttaccgggggt
aaaaaggcccaataccgtcataccgtaaaagtgaaaaccccccccacagA
AAGCTATCCCTGCTTGCGAAAATAACCAGTAATTGTAAATCACTCTTTTT
TATTTCCAGCCAAATTAGCAGTCACATTTTTTGGTGAGCAGTACGTCACA
TGGGTACCACAAACCAGCATGAATAGCCTAgtgacaaatatttttgttcg
cTTCAAAAGCAATCAACCTTCAGGAATCATTTTGTTCATCACTGGACAAA
GTACAAGTGAATTCATGTTATTGGAGCTTTATGAACGTACTTTggtcctg
aaaatgaaaataaatggtatgtttttatttcacTGTTTCACCTTTAGGTG
GGGCCCCCAGCTTGAATGCgtaaatgggctttttcacttgcgtgaatgcg
tgaaaattaaagaaaaatgcgtgaatgcgtgaattggaaaactttgcgtt
aacaaaaattgcgtgaatttcgaaaaaacattgcgtgaatgtgtaaattt
tgggaaaaatttgcATGATTAACGTGAATTGAAGGACCGCTGGGCAGCGG
GCTCTTTAGGTGGTTGATTGGATGAATGTCTCTTGCTTCGAACTTCTCAA
GAAAGAATGCAAAGCTCTCGTTTagcaataaattttgagtaaataaGGTA
TTTTGGGAGCCacaaattttcctaaaaactaCACATTTCGACAAAGAAAT
TGTTAGTAAATAGCCGTATCCAACCTTCTATGGATCCTTTGTTCCAATCA
TCGTATGTTCATCAAATGCAAAAAGTTTTTCCCTCGTTGTAGATTTTTTG
CTAGGGTCAAGGGCAAATCGTTGATAATTAATCCCCAATCGAGATTTTTT
TGCATTTGGACTGTTTTTAAAGCGGTAGAATTTATTGAAGCTTTACAATA
TGTTTTACACTGCACCATTATTTTGACAATGTCATTTATAGAGTCCATAT
TTTAcctggatagcccagtaatctaggacttttagacagtctttcgattg
tttccacggggtccacggccagccggctcggctatctatgaactgaacgg
aacattagaaggagcggggattcgaatttcaaatccctggtttgagacgc
tgatGTTAtagaccacttggccatcgctcctcGAAATATGGTATTTAACG
GATGATATGATCATCTGTTTCCAATGTCTTACTCCTTCAGGTTACGATGA
GAAAGTGTTCAAAATCCccaaatcaaccaatgagaaagCAGAACATTGGC
AAATGGTATCCTTCTCAAGAATGGGCGCCAGCATCACTATAGCAATGGAC
GATGGGTAAGAAATATGTAAAAATAGTTACAAATCATGGCATTTTTCCTA
CCTCATTATTTCCCAGGGTCAAAAGCaatttccttgaaaaatctgtcaaa
attcTATTTAAAGGAGAAATTTTACTGGAAATTCTTttcgaataattttt
tttttaaatttaaaatctcgATACGTTCTGTATATCAAAGAAACTTTGAT
AGTACATTGTTTGTTTTGCAACAATTGCTTTTGTTAGTTTTCAAACTAAT
ATAGTCTGACTATTATCAGTATCCTTAATAATCTTACCATACATACCCTA
CTTCCTTTGATTTGGTCGATTAGCATGTTAGACTACTGTACactagcgac
cgtagtgcaaaggtaaagttttctgctacggtgcgcaaggccGTGGGTTC
CCTGGCCGGTTCATACCAAAGTAATTAGTACAAAGAAGAGTATTTGGGTC
GTCTCCGACTGCGGAAGCAGATTTTCCATCTTCTCTCTAGTGTTCATGAA
TACACCAACTCAGTCAAGCAACTGGAGAACAAAATAGTTCAAGTGAAATT
CATCATCAGAAAGATTTACTTTGGTGGTGTTGACAAGCTTCAATATGGTG
ATTTTGCTCTTCGGAAATCTGAAAGTAAAATCAATTTCATTGGATGTCTT
CAAAATGTTGATGTAAATCAGGTAAAAGTCACacaaaagtatttttcaaa
gtCTTGGAACACTGATTTTCTACAGCTGTACACCCCCTTTTTCGCTGACA
AATTAGGCGTTTAAATATCCAGCAAacagatttttcttttaagaatttGT
CAAATTTACTGATGTCAAAATTGGGCTTCCTTGGGCTTATGAAGATTCTC
AGGTTTTTGTGTCCGGATTTTCTTATTGAGCTTTTCGGTTCCTGTCTGCA
TAGTTTATCAGGAAAATCTNCTTGGGCTTATGAAGATTCTCAAGTTTTTG
TGTCCGGATTTTCTTATTGAGCTTTTCGGTTCCTGTCTGCATAGTGGTTT
ATCAGTGGTTTATCTCTATTTTCGAAACAGTTTGATCTTGTGGAGAACAT
AGCAAGTCGTTCACCAAATGACAAGTCAATCAGCTTATTTGGTGGATCTC
TTCAGAAAGGCGCTTGTAAAGTATTACCAGGTAAAAAAATAATCACAATT
CTTTTTCTAGTTTGATGCATACGAGAGGTCACCCAGAAATtatattacac
ccctgtgtcacacaCCCACTGGGACCCAAGCCCCACTGGCATTTGGCAAA
AACTTCgcccccggtgggaaaataccctggaatattcagccccactggga
aattgactttgatttcattcccattcgaaattcaatgtttaaaaattgca
ctccaaaactatccTCAGTGGATTTttaaaccttggaacaatagaatttc
tatccacattggaatttcaatagaaatttttatcccactgagacaggggt
gttatatgtttaattttttaataaatagcAGAAAACTCTTTAGTGCTATC
CTGTGCCTCCCTTAGatgtttttagcaattttcatgTCGCAATTTGGTGA
CCGTCTCTTTAATAAATATTACTACGAAAACAGTATTTCAAGCAGATAAT
TTTGAAGATAAATATATCAACACTCTTCTTcgtacaatgctggacaaaag
gttgcagacaaatgaaatttcagtgaaaaatgatgagaaatagagcaaaa
tgactcttcgatgagtctgaaaggggatggaagttaagaaaaacactttt
gaagtcattgcattgctttttaattgcttttgagggaaccacaagaaaaa
aatcagcgttttgatactggtgtaagccagttaatcaagcccttgtggtt
tgcccttgcggttagactgcagtgggtgaaagacagctttgaatgggttt
ggaaagcacccagagcctcttgggaacttgtttttgatcgatattgaagt
attttgcaaatattgcagaagtctacaaaccttttgtccagcattgtata
ACAACTACAGTCAACtaactctctaattcgaacctgtATCATTCGAACCT
AAATATTTGACCCCTATATATATAGAatactttctttaattcgagGAAAT
CTactgaagatcgaattagagagaaaccGCTGTATCCCTTCCAGTTATAG
GTAGTAAACAGACACCAACACCACGAGTAGAAGAATTCATTACACCACAC
CCTTTCACCGAAACATTGCATAACAAGACACTTAGTAACCTTTTGTCTGC
ACAGGTATGTCCATTAGTACCCATGACTTTTTTGTTGGAGGTGAAGATTC
CAAATAAGATGTGTTAGCGACGAGGGGCCTGTTTCGaagacacacaacgt
tgtttcaacgttcatcgaacgttatatggacgttgtgaacgttagataaa
cgttgaaacgacgttgtgtgcatcatcagaatttttctttaaactgCGCA
AGCGATTATCTCTTCTTAGCTCCTTCAAACCATAAGCTCGACAACTTTAT
AGATGAGAAGAAAGGCTAAGAGACTTTCGCATTTTTGTAGTAAAAGGCTA
TATGAGAATTTCTGAGTCATCAGTCGAGAACATAGTCATGGAAGTGAATT
TTTGGAAGTGGTGATTCTAATCAGAAATGAAGAAACATAATATAATAATC
TATCATTACGATCTGAGTATCAACATTTCTTTGATACATGCAAACTATGA
TTATTCCTTTTGGGCTCCTTGAAAATCTTTGACTCTTTCACTTCAGAGGA
GAAGAGAGTGAAGaggaaaaatacaaaatgaataaGCAGTAGAAAACTAT
GTTGATACTTTTAAGTCTTCAGTCGAGAACATAGTCATGGAAGTGAATTT
GATTGTTCTAACGTGATGTTTTATTTAGAATGATGAAGAAGATTCCAAAT
CCTTGTTGTGGATCATCGTCGGGTCGTGCGTCAGTTTGATCGTTTTGATG
ATCGCCGTTTGTCTCGTCGTACGACATGTCAAGAAACGTAAGGAAGAACA
TAGACGATATCGTGATCATTATCTTCGACAAACCGCTATGCGTGTCGAAA
GAGAAGGTAAGatgaattgggcttttccagaaaaaaccgtataccccctg
ttaaAGAGGTCCATGTGGGAAAATGAAAGTAACGATCTGAAACTTGATGA
GATTGATAAAGTCCCATGTCTTTTATAGCTGGGTATTTGAATTCCACTGT
TTtcgagtcagaaaattcagtggggatggagagcacaatattttgcagtg
aggattttttcatttagttATTTTCAACGGggaaaaaattagagtataat
tttccactggggacgatattttgtcCAATGTTTCCAATGGGAGAAGGTGA
TCCCACCCTTGTCTGTATGAAAAGGGGTGACAGAACTATTGATAGAAGCT
CGCTCAAGGAATTTGCAGTCTCGTATCAAGAAAATGATCAAATAGCACTA
CTTTTATCAAATTTCTAAGAAATGCAAACTGGCAatcaattgtaattttt
ttcatgtgaaaattcagGGATCAAGGgtaattttcttcctttaattttCC
TCGTGCTAGCTTTCAAAAATTAACGTTTTCAAGAAGTCAACTCGCTTATT
TCACTCTTTTTTTAGATTTGTTACCGACCGAAAAATGTATCCGTGATGAA
GTGGAGAAGCGTAACATGCAATCTTTCAGTCCGTTACGTAAAGAGTTTTA
NGATGAAGTAGAGAAACGTAACATGCAATCTTTCAGTCCGTTACGTAAAG
AGTTTTACGTAGCAACGATGTCACGCGCCGGAACTCTCCAACGTTCCGTG
CATCACGAACCAATCTACCAATCACACGAAGTTTTCCATCACGCTCACCC
TTGTCTTGGTAAAAATTACGCTGTACCAAGTATCAATACGCCGCAACGCT
CTCAAAGCCCCGCATCATCTAACTACGGGACGTCACGTAAATGCAGCCAC
GCGTCTGCACGTTACCAAACACCTAACGTAAACGTCAACGCCGCTGCGCC
TGAATCGATTAAAAGCATGAGTTCCAGTTCCGgactttgaaaatgaatta
tTAGAAATAATTGAAAAACTTAAGATGTTGAGTCCAGTGTTGGTTGAAAA
ATCTAAATGATCTACTCAGGATTACTATTTTTACAAGGGCTTACAAAGTT
AGAACATTTTGTGGGTACGGGTTGGCAACGATGACCTTGTTAAAGAGTTA
CCATGTTTGTCTATAACTGAGTTGCTTAAATGGAAATTCGCATGTTGTAT
CATGTTCACGATCTAGGGCTTGGCAACAAATCACGGTGGATGTCACATCG
AAATCAAATACTATAACTATGATCGTTTACTTCCATAGAAAGTTTACGGA
TATAAAAAACACTTTCTTTAATAAATTTTGGATCCTCCTTAGTTCCAATG
GTAAGAGATGGGATGAAACGGCTGAATCCTATTCCCTCAAAGTCTGGGTT
ATATTTTCTGTATTAatcttcttaaattttattNCGGCTGAATCCTATTC
CTTCAAAGTCTGAGTTATATTTTCTGTATTAatcttcttaaattttattt
tccaacCTTTTCCTATTGTGAGACTTCAAATCAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041680XLOC_041680Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066640-exon-scaffold_457-1491911889:226798..227215TCONS_00066640-exon-scaffold_457-1491911889:226798..227215Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:226798..227215TCONS_00066640-exon-scaffold_457-1510915933:226798..227215Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:226798..227215TCONS_00066640-exon-scaffold_457-1575043694:226798..227215Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:227746..227832TCONS_00066640-exon-scaffold_457-1491911889:227746..227832Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:227746..227832TCONS_00066640-exon-scaffold_457-1510915933:227746..227832Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:227746..227832TCONS_00066640-exon-scaffold_457-1575043694:227746..227832Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:228490..228643TCONS_00066640-exon-scaffold_457-1491911889:228490..228643Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:228490..228643TCONS_00066640-exon-scaffold_457-1510915933:228490..228643Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:228490..228643TCONS_00066640-exon-scaffold_457-1575043694:228490..228643Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:228952..229046TCONS_00066640-exon-scaffold_457-1491911889:228952..229046Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:228952..229046TCONS_00066640-exon-scaffold_457-1510915933:228952..229046Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:228952..229046TCONS_00066640-exon-scaffold_457-1575043694:228952..229046Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:229446..229574TCONS_00066640-exon-scaffold_457-1491911889:229446..229574Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:229446..229574TCONS_00066640-exon-scaffold_457-1510915933:229446..229574Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:229446..229574TCONS_00066640-exon-scaffold_457-1575043694:229446..229574Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:231107..231313TCONS_00066640-exon-scaffold_457-1491911889:231107..231313Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:231107..231313TCONS_00066640-exon-scaffold_457-1510915933:231107..231313Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:231107..231313TCONS_00066640-exon-scaffold_457-1575043694:231107..231313Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:232188..232302TCONS_00066640-exon-scaffold_457-1491911889:232188..232302Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:232188..232302TCONS_00066640-exon-scaffold_457-1510915933:232188..232302Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:232188..232302TCONS_00066640-exon-scaffold_457-1575043694:232188..232302Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:232788..232968TCONS_00066640-exon-scaffold_457-1491911889:232788..232968Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:232788..232968TCONS_00066640-exon-scaffold_457-1510915933:232788..232968Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:232788..232968TCONS_00066640-exon-scaffold_457-1575043694:232788..232968Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:233328..233427TCONS_00066640-exon-scaffold_457-1491911889:233328..233427Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:233328..233427TCONS_00066640-exon-scaffold_457-1510915933:233328..233427Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:233328..233427TCONS_00066640-exon-scaffold_457-1575043694:233328..233427Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:234442..234551TCONS_00066640-exon-scaffold_457-1491911889:234442..234551Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:234442..234551TCONS_00066640-exon-scaffold_457-1510915933:234442..234551Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:234442..234551TCONS_00066640-exon-scaffold_457-1575043694:234442..234551Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:235176..235353TCONS_00066640-exon-scaffold_457-1491911889:235176..235353Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:235176..235353TCONS_00066640-exon-scaffold_457-1510915933:235176..235353Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:235176..235353TCONS_00066640-exon-scaffold_457-1575043694:235176..235353Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1491911889:235913..236883TCONS_00066640-exon-scaffold_457-1491911889:235913..236883Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1510915933:235913..236883TCONS_00066640-exon-scaffold_457-1510915933:235913..236883Clytia hemisphaericaexon
TCONS_00066640-exon-scaffold_457-1575043694:235913..236883TCONS_00066640-exon-scaffold_457-1575043694:235913..236883Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_457supercontigscaffold_457:226798..236883 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0.0475194 tpm) - - (4.12243 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.312969	0.204632	0.0475194	0.0619871	0.0645955	0.178896	1.03636	1.05475	1.04122	1.14708	0.352533	0.685943	1.30951	1.05394	0.238313	0.196073	1.1009	1.23085	2.72817	4.12243	2.38667	2.05563	1.05201	1.11169	2.04463	2.41394	1.10155	0.89793	0.201856	0.180556
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066640 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
200400600800100012001400160018002000220024002600Expect = 6.51e-17 / Id = 21.45SequenceNRX1A
Match NameE-valueIdentityDescription
NRX1A6.514e-1721.45Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1[more]
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