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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066621 ID=TCONS_00066621|Name=TCONS_00066621|organism=Clytia hemisphaerica|type=transcript|length=1138bp
CTAGGCTACAAAAAGCCGTGTTTTTTATATGTACAGGTGAACTTATGTTG
TTAGAGACGGAAAAGTCTCACTTGAACGATCATAGACCCGTGTGCTAATA
GTAATATGTAGGCTAACAAgctgcaaaatcaaaacattgaaatattcAGT
TTCAAGCAGCCACACtggtagcctgggaatccatgctatgatttcttctt
tgataaactgatggcgaaatgtatagcatggtatgggctgagagtttgaa
tttctcagNGTGTGGTTCAAAGTTTTCGTATATAATTCAACATTTCGTGG
TGACGACAAAGACTAGGCTGCACAAGGCGTCTCTATGACCATATAAATGA
CTAGCACTTGGGTTTATCACTGATTTACTTGCTCAAATCACATACAATGG
CCTTTTTGTTTACAACAGAAAGGTTATTTGACCAATTTCATCTCAGGGAT
ATTTCAGATTTTCAAGTTACCGCATGACACACTGAATGGACGTAGCATAG
CTCACGTTATTGGCGTACatggttaaaatttgaaaatggacaTATTAACT
GGCCAATTCCTAGCaagacatcattaaatataCTTAGAATGTCTAGTTTC
ATGATTTTGAACCCTTGAAATAGACTCATAAGAAGAATTTCATGTCATGA
AACTGATAGTAGATTTATTACAATATTATACCATTTTCTGTCATTTTACG
CGTTCACcgaaatatcaatattttcagtttttgtaaagCCTAAggtctga
aattttcagcattTGATTATAttgtatataagaacatttgtaCAAAGTTT
TAGAGGAAACTGACAGTTATTTTGGATTTAATGATGATTTTTgtgtaaaa
ataatatttttacgtaaaaatttattttttattttcaaacttgaaatttc
tgctgacgtcagcaaaataaaaatttggattttttttttctttcatctga
aaggttttttacccagctttcagaaaatatatactttataTGGTGTATTA
GCAACCTTTCAAGAGATATCCCCCTTATACTGAAGGtgtgtaaaatattt
ttagaatttggaaaattattaaaaccgCCAAAGAGTTAAAATTGCTTGTC
AGACAGCAactttctgttttgtttacttgatttttttc Run BLAST on NCBI transcript from alignment at scaffold_456:699885..701022 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066621 ID=TCONS_00066621|Name=TCONS_00066621|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_456:699885..701022 (Clytia hemisphaerica)
gaaaaaaatcaagtaaacaaaacagaaagtTGCTGTCTGACAAGCAATTT
TAACTCTTTGGcggttttaataattttccaaattctaaaaatattttaca
caCCTTCAGTATAAGGGGGATATCTCTTGAAAGGTTGCTAATACACCAta
taaagtatatattttctgaaagctgggtaaaaaacctttcagatgaaaga
aaaaaaaaatccaaatttttattttgctgacgtcagcagaaatttcaagt
ttgaaaataaaaaataaatttttacgtaaaaatattatttttacacAAAA
ATCATCATTAAATCCAAAATAACTGTCAGTTTCCTCTAAAACTTTGtaca
aatgttcttatatacaaTATAATCAaatgctgaaaatttcagaccTTAGG
ctttacaaaaactgaaaatattgatatttcgGTGAACGCGTAAAATGACA
GAAAATGGTATAATATTGTAATAAATCTACTATCAGTTTCATGACATGAA
ATTCTTCTTATGAGTCTATTTCAAGGGTTCAAAATCATGAAACTAGACAT
TCTAAGtatatttaatgatgtcttGCTAGGAATTGGCCAGTTAATAtgtc
cattttcaaattttaaccatGTACGCCAATAACGTGAGCTATGCTACGTC
CATTCAGTGTGTCATGCGGTAACTTGAAAATCTGAAATATCCCTGAGATG
AAATTGGTCAAATAACCTTTCTGTTGTAAACAAAAAGGCCATTGTATGTG
ATTTGAGCAAGTAAATCAGTGATAAACCCAAGTGCTAGTCATTTATATGG
TCATAGAGACGCCTTGTGCAGCCTAGTCTTTGTCGTCACCACGAAATGTT
GAATTATATACGAAAACTTTGAACCACACNctgagaaattcaaactctca
gcccataccatgctatacatttcgccatcagtttatcaaagaagaaatca
tagcatggattcccaggctaccaGTGTGGCTGCTTGAAACTgaatatttc
aatgttttgattttgcagcTTGTTAGCCTACATATTACTATTAGCACACG
GGTCTATGATCGTTCAAGTGAGACTTTTCCGTCTCTAACAACATAAGTTC
ACCTGTACATATAAAAAACACGGCTTTTTGTAGCCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066621-exon-scaffold_456-1491911889:699885..701022 | TCONS_00066621-exon-scaffold_456-1491911889:699885..701022 | Clytia hemisphaerica | exon |
| TCONS_00066621-exon-scaffold_456-1510915933:699885..701022 | TCONS_00066621-exon-scaffold_456-1510915933:699885..701022 | Clytia hemisphaerica | exon |
| TCONS_00066621-exon-scaffold_456-1575043694:699885..701022 | TCONS_00066621-exon-scaffold_456-1575043694:699885..701022 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_456 | supercontig | scaffold_456:699885..701022 . |
Blast
The following BLAST results are available for this feature:
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