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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066606 ID=TCONS_00066606|Name=TCONS_00066606|organism=Clytia hemisphaerica|type=transcript|length=3075bp
TCTGTACTTTCCTTTGTAATTCATCTTGACGTCTATCATATTTACTTTCA
TACTTAATATGTTTCTCATTGTGGCTTTGTCAGTTTCGTCTAAGTATTTC
TTTCTTTCGAACCCCTTACTGTTTCTGGATTTTGTTCGTTTCGTCCATTC
TTCGTTTTCAATACTTTTCGTGATGGCTTTTCGTATTCTTTTTTTCCACT
CGTTTTTTGATATATCTTTCACGCTCGTTGTGTCGATTTCGTATTGGTCA
CATCGTTCTTTCAGTTCACTGTACCAACAATTTCGTATTTCATTCTCCAT
TTGGGCCTTTAGAATCTTTGCTGCTACCCTTTCATCTGGAGAATTGATTA
GGTTGTGTAACAGTAGaagttttttgtaatttatgtAGTGTCTTATAGGC
CAAATGCCTAATTCACTTAGGAATGGCTCGTACGGTGTTGTTTTTGGCAT
TCCGTATATTCTCAATAGCAtatctttttgcattttttcaatGCTTGcca
tttcactttttgaaatcGCACTCCAAGTTTCCATGTTCGACGTCACGTAT
GGAAGTGCCTTCGTTAAGTATAGCTTGTTAACTACTTTTCCGTAACTTTC
TCCAGTGCAATCTGCATCTTTTATAATTGCCTTCGTAATTCCGTATATCT
TTTTCTCCTTGTTTTGGATCGTATCTTTATATGTACCTTTGTTGTTGACG
TAATCTCCTAGGTACTTATATTTATCGGTTTTGATAATAGGGCCTTTTTT
AACCCTTTTCTTAATTTCTACTCGATCTCTTTTTTCGCCAAATTCTAAAA
TTTGATAGTTACTTTTAGTTTCATTAAAGGTCATTCTCTTCTTTTCCTCC
ATCCTCGCACAGTTATCAATGGTTTTGGAGACGGTTTCTCTGCCTCCTGC
TCCACAAATATCATCTACATAGGTGAGTGACTCTACatttaaatttgaat
ataaGGTACTCACTTTTTCGCCGACTTTGTTCACCTTCTCTGTGGATACT
GCACATAATGTTGGCCCCCAAATTGTTCCCTGACGTACAATCTCCTTGGT
TGTTATCTCTGCTGTTCTCCCGTGTGGCGTGTCCACCACTATTTTCGCTT
CTTTGTTCATTTCGAAAATGATCATCGCCTCGTTAGCAGGTACTCCTGCC
TTCCACGCTTCCACTATACAATCGCGAAGCCAGAGTTTGTCGAAACATTT
CTCCAAATCACCATAGAACAAGTAAAGATTTTTGTTGTAATATTTCGCGT
CATCAATTAGTGCTCGCATCGTAAAGAGATGGTCACAAATTCCCCTGCCG
CTCCTTCCACCACACTGGAAAGGAGACATATTCTCTTCAATCGTCGTTTT
GTTTCTATTGAGAAGGATTCTCTCAAAGATCTTGCTCACTATGCTCGTTA
GAAAGATCCCACgttgatttttcatttcatttcttttgcctttattttta
taaattgaCTTTATAATCATATGTTTCCATCTATCTGGAATTTCagcttt
caataaaatttcattcaatAACTTGAGGAGACTCGTTTTTAATTTCTCTC
CTCCGTACTTTATAaactcattttttatttcactgAAATCCTCAGCCTTT
TTCGTGCTGAGGTTTCTTATAACCTTATCCAGTTCTTCCCTGGATATTTC
TCTTATCTCGCATTTAGTTGCTTCCCTCTTTATCATCTCAAAACATTCAT
TGACTCTCTCCTCCGATCTCCTTTCCTCCTCTGTCGTTGCCGGTGATGCC
ATCAGTAGATTCTGGTACCATTGCTTGTATACATTCTTAATCTCCTCTTG
ATCTTCCTTCACCTCTCCTCGTTCATCTATCATTGACGTTTTCTTCTGTG
TCTTATCTTTTGTTGGCTTAATGATCTTCCAGAAGTCTGGACTGTTGACT
CCTCCCGCTTTCTCGATTTGCTCTACTTTTTTACGTGTCGTTTTCATTCT
TTCTTCTTTCGTTTCACTTTCTATGTGCTGGTTTAGCAGCTTGATTCTTG
TTTTCTCTATGCTGTTTTCGTTAGTTTCGTTACCTTTCTCTATCTTTATC
AGGTCCCTCCTTTTTTTCAtcagttttcttctttttgggcTGGTTTTGGT
GTATTTGTTCACTTTGCACTTTGTGAAgcattttttactcattttgatGA
TCTCATCTTCCCATTTCTCGTATCTGTCGTTAAGTGGTAGTGACTTTTCT
GTCGCTATCGATGTGAGTTTTTCAATATTTGTTACGATCTTGTACGCTGC
TTTCGTTTTCACTGTTATGtttgatatatattttttctttttctctaccG
ATGCTGTTGTTTTCCAGTTGACGGTGCCAATCATTGCACAATGATCGGTG
TACTTTGCCTCCTTGTCTTTGATGTAATACGGGGTTAGTGCTTTAGTTTC
GTCTATCGTCATCTTGACACCTCCTTTTCGATAGTTGTTCGTCATTACGT
AGTCAATGGTCGATTTTTCATCACCTTGAATTCTAGTCCATTTCCCCTCT
GCATCATCGTTCACAATGTATATCTCGTTATCCTTGACTAGTTCTTTAAG
TAATTTGCCACCTTTTGTGACTTGCTCGTATATTTTTGCGTTGAAATCTC
CTAATATAAGGAGTTCTTCACCTTGCCGCTTTGCTACTTTAACTTGTTGT
TGTATTCtgttatacatatttttaaGTTGTTCTAAGTCTGTTCTTGATTC
TTGGGGGGCGTAGATCACTCCTATTCGGATTTTCGTTTGTTTGTTGTCAA
TTTTTACCCATAATGTTTCTTCTTCGTCCGCTTGTCTATCTACCTCTATC
ATATTCTTTCCGATCTCCTTTCTTACTGCTATCAGTATCCCTCCTCCTGT
ATCTGCTTTAGTTCTGTCGTTTCTCAGAATCTTGTACTCCGGAAATTTTT
CCTCGATCTCCTTGACTGCCTCGTCTTGTTGTAGGTGGGTTTCAACTATG
CAGAACATCGTTGGTTTTACGTTATCTTGTATTATTTCAGTTAGTTGTTC
TAGTTTTGATGTCATGCCTCTGATATTATTATAgtagaatttaaaatttt
tgtaatgttttttgtttctttttcc Run BLAST on NCBI protein sequence of TCONS_00066606-protein >TCONS_00066606-protein ID=TCONS_00066606-protein|Name=TCONS_00066606-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1025bp
GKRNKKHYKNFKFYYNNIRGMTSKLEQLTEIIQDNVKPTMFCIVETHLQQ
DEAVKEIEEKFPEYKILRNDRTKADTGGGILIAVRKEIGKNMIEVDRQAD
EEETLWVKIDNKQTKIRIGVIYAPQESRTDLEQLKNMYNRIQQQVKVAKR
QGEELLILGDFNAKIYEQVTKGGKLLKELVKDNEIYIVNDDAEGKWTRIQ
GDEKSTIDYVMTNNYRKGGVKMTIDETKALTPYYIKDKEAKYTDHCAMIG
TVNWKTTASVEKKKKYISNITVKTKAAYKIVTNIEKLTSIATEKSLPLND
RYEKWEDEIIKMSKKCFTKCKVNKYTKTSPKRRKLMKKRRDLIKIEKGNE
TNENSIEKTRIKLLNQHIESETKEERMKTTRKKVEQIEKAGGVNSPDFWK
IIKPTKDKTQKKTSMIDERGEVKEDQEEIKNVYKQWYQNLLMASPATTEE
ERRSEERVNECFEMIKREATKCEIREISREELDKVIRNLSTKKAEDFSEI
KNEFIKYGGEKLKTSLLKLLNEILLKAEIPDRWKHMIIKSIYKNKGKRNE
MKNQRGIFLTSIVSKIFERILLNRNKTTIEENMSPFQCGGRSGRGICDHL
FTMRALIDDAKYYNKNLYLFYGDLEKCFDKLWLRDCIVEAWKAGVPANEA
MIIFEMNKEAKIVVDTPHGRTAEITTKEIVRQGTIWGPTLCAVSTEKVNK
VGEKVSTLYSNLNVESLTYVDDICGAGGRETVSKTIDNCARMEEKKRMTF
NETKSNYQILEFGEKRDRVEIKKRVKKGPIIKTDKYKYLGDYVNNKGTYK
DTIQNKEKKIYGITKAIIKDADCTGESYGKVVNKLYLTKALPYVTSNMET
WSAISKSEMASIEKMQKDMLLRIYGMPKTTPYEPFLSELGIWPIRHYINY
KKLLLLHNLINSPDERVAAKILKAQMENEIRNCWYSELKERCDQYEIDTT
SVKDISKNEWKKRIRKAITKSIENEEWTKRTKSRNSKGFERKKYLDETDK
ATMRNILSMKVNMIDVKMNYKGKYR Run BLAST on NCBI transcript from alignment at scaffold_456:317982..321056 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066606 ID=TCONS_00066606|Name=TCONS_00066606|organism=Clytia hemisphaerica|type=transcript|length=3075bp|location=Sequence derived from alignment at scaffold_456:317982..321056 (Clytia hemisphaerica)
ggaaaaagaaacaaaaaacattacaaaaattttaaattctacTATAATAA
TATCAGAGGCATGACATCAAAACTAGAACAACTAACTGAAATAATACAAG
ATAACGTAAAACCAACGATGTTCTGCATAGTTGAAACCCACCTACAACAA
GACGAGGCAGTCAAGGAGATCGAGGAAAAATTTCCGGAGTACAAGATTCT
GAGAAACGACAGAACTAAAGCAGATACAGGAGGAGGGATACTGATAGCAG
TAAGAAAGGAGATCGGAAAGAATATGATAGAGGTAGATAGACAAGCGGAC
GAAGAAGAAACATTATGGGTAAAAATTGACAACAAACAAACGAAAATCCG
AATAGGAGTGATCTACGCCCCCCAAGAATCAAGAACAGACTTAGAACAAC
ttaaaaatatgtataacaGAATACAACAACAAGTTAAAGTAGCAAAGCGG
CAAGGTGAAGAACTCCTTATATTAGGAGATTTCAACGCAAAAATATACGA
GCAAGTCACAAAAGGTGGCAAATTACTTAAAGAACTAGTCAAGGATAACG
AGATATACATTGTGAACGATGATGCAGAGGGGAAATGGACTAGAATTCAA
GGTGATGAAAAATCGACCATTGACTACGTAATGACGAACAACTATCGAAA
AGGAGGTGTCAAGATGACGATAGACGAAACTAAAGCACTAACCCCGTATT
ACATCAAAGACAAGGAGGCAAAGTACACCGATCATTGTGCAATGATTGGC
ACCGTCAACTGGAAAACAACAGCATCggtagagaaaaagaaaaaatatat
atcaaaCATAACAGTGAAAACGAAAGCAGCGTACAAGATCGTAACAAATA
TTGAAAAACTCACATCGATAGCGACAGAAAAGTCACTACCACTTAACGAC
AGATACGAGAAATGGGAAGATGAGATCatcaaaatgagtaaaaaatgcTT
CACAAAGTGCAAAGTGAACAAATACACCAAAACCAgcccaaaaagaagaa
aactgaTGAAAAAAAGGAGGGACCTGATAAAGATAGAGAAAGGTAACGAA
ACTAACGAAAACAGCATAGAGAAAACAAGAATCAAGCTGCTAAACCAGCA
CATAGAAAGTGAAACGAAAGAAGAAAGAATGAAAACGACACGTAAAAAAG
TAGAGCAAATCGAGAAAGCGGGAGGAGTCAACAGTCCAGACTTCTGGAAG
ATCATTAAGCCAACAAAAGATAAGACACAGAAGAAAACGTCAATGATAGA
TGAACGAGGAGAGGTGAAGGAAGATCAAGAGGAGATTAAGAATGTATACA
AGCAATGGTACCAGAATCTACTGATGGCATCACCGGCAACGACAGAGGAG
GAAAGGAGATCGGAGGAGAGAGTCAATGAATGTTTTGAGATGATAAAGAG
GGAAGCAACTAAATGCGAGATAAGAGAAATATCCAGGGAAGAACTGGATA
AGGTTATAAGAAACCTCAGCACGAAAAAGGCTGAGGATTTcagtgaaata
aaaaatgagttTATAAAGTACGGAGGAGAGAAATTAAAAACGAGTCTCCT
CAAGTTattgaatgaaattttattgaaagctGAAATTCCAGATAGATGGA
AACATATGATTATAAAGtcaatttataaaaataaaggcaaaagaaatgaa
atgaaaaatcaacGTGGGATCTTTCTAACGAGCATAGTGAGCAAGATCTT
TGAGAGAATCCTTCTCAATAGAAACAAAACGACGATTGAAGAGAATATGT
CTCCTTTCCAGTGTGGTGGAAGGAGCGGCAGGGGAATTTGTGACCATCTC
TTTACGATGCGAGCACTAATTGATGACGCGAAATATTACAACAAAAATCT
TTACTTGTTCTATGGTGATTTGGAGAAATGTTTCGACAAACTCTGGCTTC
GCGATTGTATAGTGGAAGCGTGGAAGGCAGGAGTACCTGCTAACGAGGCG
ATGATCATTTTCGAAATGAACAAAGAAGCGAAAATAGTGGTGGACACGCC
ACACGGGAGAACAGCAGAGATAACAACCAAGGAGATTGTACGTCAGGGAA
CAATTTGGGGGCCAACATTATGTGCAGTATCCACAGAGAAGGTGAACAAA
GTCGGCGAAAAAGTGAGTACCttatattcaaatttaaatGTAGAGTCACT
CACCTATGTAGATGATATTTGTGGAGCAGGAGGCAGAGAAACCGTCTCCA
AAACCATTGATAACTGTGCGAGGATGGAGGAAAAGAAGAGAATGACCTTT
AATGAAACTAAAAGTAACTATCAAATTTTAGAATTTGGCGAAAAAAGAGA
TCGAGTAGAAATTAAGAAAAGGGTTAAAAAAGGCCCTATTATCAAAACCG
ATAAATATAAGTACCTAGGAGATTACGTCAACAACAAAGGTACATATAAA
GATACGATCCAAAACAAGGAGAAAAAGATATACGGAATTACGAAGGCAAT
TATAAAAGATGCAGATTGCACTGGAGAAAGTTACGGAAAAGTAGTTAACA
AGCTATACTTAACGAAGGCACTTCCATACGTGACGTCGAACATGGAAACT
TGGAGTGCgatttcaaaaagtgaaatggCAAGCattgaaaaaatgcaaaa
agataTGCTATTGAGAATATACGGAATGCCAAAAACAACACCGTACGAGC
CATTCCTAAGTGAATTAGGCATTTGGCCTATAAGACACTacataaattac
aaaaaacttCTACTGTTACACAACCTAATCAATTCTCCAGATGAAAGGGT
AGCAGCAAAGATTCTAAAGGCCCAAATGGAGAATGAAATACGAAATTGTT
GGTACAGTGAACTGAAAGAACGATGTGACCAATACGAAATCGACACAACG
AGCGTGAAAGATATATCAAAAAACGAGTGGAAAAAAAGAATACGAAAAGC
CATCACGAAAAGTATTGAAAACGAAGAATGGACGAAACGAACAAAATCCA
GAAACAGTAAGGGGTTCGAAAGAAAGAAATACTTAGACGAAACTGACAAA
GCCACAATGAGAAACATATTAAGTATGAAAGTAAATATGATAGACGTCAA
GATGAATTACAAAGGAAAGTACAGA Coding sequence (CDS) from alignment at scaffold_456:317982..321056 >TCONS_00066606 ID=TCONS_00066606|Name=TCONS_00066606|organism=Clytia hemisphaerica|type=CDS|length=3075bp|location=Sequence derived from alignment at scaffold_456:317982..321056 (Clytia hemisphaerica)
ggaaaaagaaacaaaaaacattacaaaaattttaaattctacTATAATAA
TATCAGAGGCATGACATCAAAACTAGAACAACTAACTGAAATAATACAAG
ATAACGTAAAACCAACGATGTTCTGCATAGTTGAAACCCACCTACAACAA
GACGAGGCAGTCAAGGAGATCGAGGAAAAATTTCCGGAGTACAAGATTCT
GAGAAACGACAGAACTAAAGCAGATACAGGAGGAGGGATACTGATAGCAG
TAAGAAAGGAGATCGGAAAGAATATGATAGAGGTAGATAGACAAGCGGAC
GAAGAAGAAACATTATGGGTAAAAATTGACAACAAACAAACGAAAATCCG
AATAGGAGTGATCTACGCCCCCCAAGAATCAAGAACAGACTTAGAACAAC
ttaaaaatatgtataacaGAATACAACAACAAGTTAAAGTAGCAAAGCGG
CAAGGTGAAGAACTCCTTATATTAGGAGATTTCAACGCAAAAATATACGA
GCAAGTCACAAAAGGTGGCAAATTACTTAAAGAACTAGTCAAGGATAACG
AGATATACATTGTGAACGATGATGCAGAGGGGAAATGGACTAGAATTCAA
GGTGATGAAAAATCGACCATTGACTACGTAATGACGAACAACTATCGAAA
AGGAGGTGTCAAGATGACGATAGACGAAACTAAAGCACTAACCCCGTATT
ACATCAAAGACAAGGAGGCAAAGTACACCGATCATTGTGCAATGATTGGC
ACCGTCAACTGGAAAACAACAGCATCggtagagaaaaagaaaaaatatat
atcaaaCATAACAGTGAAAACGAAAGCAGCGTACAAGATCGTAACAAATA
TTGAAAAACTCACATCGATAGCGACAGAAAAGTCACTACCACTTAACGAC
AGATACGAGAAATGGGAAGATGAGATCatcaaaatgagtaaaaaatgcTT
CACAAAGTGCAAAGTGAACAAATACACCAAAACCAgcccaaaaagaagaa
aactgaTGAAAAAAAGGAGGGACCTGATAAAGATAGAGAAAGGTAACGAA
ACTAACGAAAACAGCATAGAGAAAACAAGAATCAAGCTGCTAAACCAGCA
CATAGAAAGTGAAACGAAAGAAGAAAGAATGAAAACGACACGTAAAAAAG
TAGAGCAAATCGAGAAAGCGGGAGGAGTCAACAGTCCAGACTTCTGGAAG
ATCATTAAGCCAACAAAAGATAAGACACAGAAGAAAACGTCAATGATAGA
TGAACGAGGAGAGGTGAAGGAAGATCAAGAGGAGATTAAGAATGTATACA
AGCAATGGTACCAGAATCTACTGATGGCATCACCGGCAACGACAGAGGAG
GAAAGGAGATCGGAGGAGAGAGTCAATGAATGTTTTGAGATGATAAAGAG
GGAAGCAACTAAATGCGAGATAAGAGAAATATCCAGGGAAGAACTGGATA
AGGTTATAAGAAACCTCAGCACGAAAAAGGCTGAGGATTTcagtgaaata
aaaaatgagttTATAAAGTACGGAGGAGAGAAATTAAAAACGAGTCTCCT
CAAGTTattgaatgaaattttattgaaagctGAAATTCCAGATAGATGGA
AACATATGATTATAAAGtcaatttataaaaataaaggcaaaagaaatgaa
atgaaaaatcaacGTGGGATCTTTCTAACGAGCATAGTGAGCAAGATCTT
TGAGAGAATCCTTCTCAATAGAAACAAAACGACGATTGAAGAGAATATGT
CTCCTTTCCAGTGTGGTGGAAGGAGCGGCAGGGGAATTTGTGACCATCTC
TTTACGATGCGAGCACTAATTGATGACGCGAAATATTACAACAAAAATCT
TTACTTGTTCTATGGTGATTTGGAGAAATGTTTCGACAAACTCTGGCTTC
GCGATTGTATAGTGGAAGCGTGGAAGGCAGGAGTACCTGCTAACGAGGCG
ATGATCATTTTCGAAATGAACAAAGAAGCGAAAATAGTGGTGGACACGCC
ACACGGGAGAACAGCAGAGATAACAACCAAGGAGATTGTACGTCAGGGAA
CAATTTGGGGGCCAACATTATGTGCAGTATCCACAGAGAAGGTGAACAAA
GTCGGCGAAAAAGTGAGTACCttatattcaaatttaaatGTAGAGTCACT
CACCTATGTAGATGATATTTGTGGAGCAGGAGGCAGAGAAACCGTCTCCA
AAACCATTGATAACTGTGCGAGGATGGAGGAAAAGAAGAGAATGACCTTT
AATGAAACTAAAAGTAACTATCAAATTTTAGAATTTGGCGAAAAAAGAGA
TCGAGTAGAAATTAAGAAAAGGGTTAAAAAAGGCCCTATTATCAAAACCG
ATAAATATAAGTACCTAGGAGATTACGTCAACAACAAAGGTACATATAAA
GATACGATCCAAAACAAGGAGAAAAAGATATACGGAATTACGAAGGCAAT
TATAAAAGATGCAGATTGCACTGGAGAAAGTTACGGAAAAGTAGTTAACA
AGCTATACTTAACGAAGGCACTTCCATACGTGACGTCGAACATGGAAACT
TGGAGTGCgatttcaaaaagtgaaatggCAAGCattgaaaaaatgcaaaa
agataTGCTATTGAGAATATACGGAATGCCAAAAACAACACCGTACGAGC
CATTCCTAAGTGAATTAGGCATTTGGCCTATAAGACACTacataaattac
aaaaaacttCTACTGTTACACAACCTAATCAATTCTCCAGATGAAAGGGT
AGCAGCAAAGATTCTAAAGGCCCAAATGGAGAATGAAATACGAAATTGTT
GGTACAGTGAACTGAAAGAACGATGTGACCAATACGAAATCGACACAACG
AGCGTGAAAGATATATCAAAAAACGAGTGGAAAAAAAGAATACGAAAAGC
CATCACGAAAAGTATTGAAAACGAAGAATGGACGAAACGAACAAAATCCA
GAAACAGTAAGGGGTTCGAAAGAAAGAAATACTTAGACGAAACTGACAAA
GCCACAATGAGAAACATATTAAGTATGAAAGTAAATATGATAGACGTCAA
GATGAATTACAAAGGAAAGTACAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066606-exon-scaffold_456-1491911889:317982..321056 | TCONS_00066606-exon-scaffold_456-1491911889:317982..321056 | Clytia hemisphaerica | exon |
| TCONS_00066606-exon-scaffold_456-1510915933:317982..321056 | TCONS_00066606-exon-scaffold_456-1510915933:317982..321056 | Clytia hemisphaerica | exon |
| TCONS_00066606-exon-scaffold_456-1575043694:317982..321056 | TCONS_00066606-exon-scaffold_456-1575043694:317982..321056 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_456 | supercontig | scaffold_456:317982..321056 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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