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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066521 ID=TCONS_00066521|Name=TCONS_00066521|organism=Clytia hemisphaerica|type=transcript|length=2090bp
taggtaaaaaaatgtttatttacaTCTTACTAGCAATACCAAGTCTGTTC
TTACTATGGGTATTAATCACTTATGTGGAACATTTAATCAGTTCGAGGAA
ATATCCAAAAGGACCATTCCCGCTTCCTCTGATTGGAAACCTGAATTTGC
TGAGTAAAGATTTACACTTGAATTTCTTGGAGATTGGAAAAACGTATGGT
GACGTGTTCAGTATTAGCATAGGTATGAAAAGATACGTCATCGTTAATTC
TTACGAGAACGTCAAAGAGGGGCTTATCACCAAAGGGCATGAGATGGCTG
GACGCTCACCAAGACTTAGTCTACTGGTAGCAACTAAAGGACGAAGAACA
TTCGGTGCAATGGATTATTCCAAGTCATGGGCTTTCATCAGAAAATTAGC
GTACAAAAGTTTACATTTATATGGAAGCGGCATGACGAATATTGAAGATA
TTGTGACCGATGACGTAGATAAATTGTGCTCCATTATCTCTGGCGAACTT
GACAAACCTGTTCCTATACAACCATATTTAGGCAACACATTGATCAACAC
CATCTGCCGAAGATGTTTTTCCACAAACTACGAGATCGATGATCCTGAAT
TTCGACATATTCTTGAATTCACCGCAAATATTGGCAAAGGAGCTCTTGGT
CTGGATATGTGGTTGGCCATGTTGCCTTGGCTTGTTTATCTCCCACATTT
CACCTCGACTGCACAATTCAAAATGCTGGTCACAGCAGTGAATCAAAGAA
GCGTTATGACTCATCGAATGTTCGAGGAACACAAGACTACTTTGAATCCA
GACAAGCTTCGAGATGTAACTGATCAACTTCTCTTTCTATCCTCAAACAA
AGAAGCGTGGAAAGATGCCGGCTTCGAAGAAGTTTCTCAAGACCATCTCG
AAAATACagtcaatattttgtttttcgcCGGCATTGAAACTTCTCTTACA
ACACTTCGTTGGTTTTTCCTGTATTGCCTACACCACCCAGAATACCAAAA
GAAAATGCATGACGAAATTGTGGATACATTTGGTTTGAGACACCGTCTAA
CTTATTCAGATCTGGACTCTTTGCCGTTCACCCAGGCAATGCTGTTTGAA
ACCAATCGAAAATCTTCAATTGCTAGAATCAATGTTGCACATAAAGCCAT
GGTGGATACATCAATCAATGGAATCAACATTCCAAAAGGAGCTCCAATAC
TGTTTAACCTATACAGTCTCCACTATGACGAAAATCATTGGGTAAAACCG
CACGAGTTCAACCCTCACCGCTGGTTAAATGCTGATGGAAATTTAAAGAA
GGAAAGGGCAACACACTATCTGCCTTTTTCAGCTGGAACTCGAGTCTGCC
TTGGTGAGAAAATGGCTAAAGTTCAAATGTTTTTGATCACGACGAAATTG
ATTCGGACTTTCGAGATATGTCCATATCTTGAAGAGAAGCTACCGGGGTT
GGACGAGCGAGGACCAGGAGGACCGTATTCACCAGCTACAGACTATAAAG
TGATCTTCAAGAGACGGATACAATCATAAAACAAACCATAGTGAGCCAAC
GAACGATATCTTATAAGAAGAACTTCACAATAAAGCTCGAATCTCAAGGA
GCCAGTAAAACTTTTGCTGCCAATTTATCAgacttgcaaaaaaaaaaacg
ttcagTACAGTGGAAGCTCCGAAGATCCAACTTCATTTACTTTATTCCTA
TGATACTGTTTCTTTTTACAAATAAGATGAAAAATTTGCAACAAGTTGAA
TATCTTCTTTATCCCCTCCTCCTCCTCAACATTTGAGTTGTGGAGACTCT
ATTGTAGTGATATTTTTATACCCCAAAAGAATGGCTGTTCGGAAAACTAG
AGGATGAATATAAAGGTTttatctcaaaaaaatttttcccgttTTATACA
cgcatatttcatatcagaaaTAGACTTTGTGTtgcagtttcaaaatttta
gatattttttgaattcaaattattattacattcaaagatttttgaattct
tcggatgttctcaactttttgagttttaagcctaaaaatgttcttagcat
gttcttattttcaccattttgtgagtatttttgtccatat Run BLAST on NCBI protein sequence of TCONS_00066521-protein >TCONS_00066521-protein ID=TCONS_00066521-protein|Name=TCONS_00066521-protein|organism=Clytia hemisphaerica|type=polypeptide|length=508bp
GKKMFIYILLAIPSLFLLWVLITYVEHLISSRKYPKGPFPLPLIGNLNLL
SKDLHLNFLEIGKTYGDVFSISIGMKRYVIVNSYENVKEGLITKGHEMAG
RSPRLSLLVATKGRRTFGAMDYSKSWAFIRKLAYKSLHLYGSGMTNIEDI
VTDDVDKLCSIISGELDKPVPIQPYLGNTLINTICRRCFSTNYEIDDPEF
RHILEFTANIGKGALGLDMWLAMLPWLVYLPHFTSTAQFKMLVTAVNQRS
VMTHRMFEEHKTTLNPDKLRDVTDQLLFLSSNKEAWKDAGFEEVSQDHLE
NTVNILFFAGIETSLTTLRWFFLYCLHHPEYQKKMHDEIVDTFGLRHRLT
YSDLDSLPFTQAMLFETNRKSSIARINVAHKAMVDTSINGINIPKGAPIL
FNLYSLHYDENHWVKPHEFNPHRWLNADGNLKKERATHYLPFSAGTRVCL
GEKMAKVQMFLITTKLIRTFEICPYLEEKLPGLDERGPGGPYSPATDYKV
IFKRRIQS Run BLAST on NCBI transcript from alignment at scaffold_456:691418..694485+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066521 ID=TCONS_00066521|Name=TCONS_00066521|organism=Clytia hemisphaerica|type=transcript|length=3068bp|location=Sequence derived from alignment at scaffold_456:691418..694485+ (Clytia hemisphaerica)
taggtaaaaaaatgtttatttacaTCTTACTAGCAATACCAAGTCTGTTC
TTACTATGGGTATTAATCACTTATGTGGAACATTTAATCAGTTCGAGGAA
ATATCCAAAAGGACCATTCCCGCTTCCTCTGATTGGAAACCTGAATTTGC
TGAGTAAAGATTTACACTTGAATTTCTTGGAGATTGGAAAAACGTATGGT
GACGTGTTCAGTATTAGCATAGGTAAGagcatttgttttatttttggtgA
CAGAAAATTTGCTCGTGGATGCATGCGCCCGGTGTAACCGTAAATCTTTA
CTCCCCGAAATTAGTCTAGTGAAGAAAGATGcctttttattagaattttt
attGGGCCAAGAAAAAGCTGTACGAAcaagaattttttgaattaaatttc
aagaattatttcaaaataaagaaaacagtgTTGCAGTGTCAAGATGTAGC
CAGGTTTTTTAAATATCTCTCAATTTTCTAACCCAAGCAAATCGcactca
agaaaaaagtttaaattcaatttaaatgtcaaaataacAGTAAAAGTTTT
TCCATATAGTTTTTGTAATTTATTCATGATAAACaggaaaaaaaagatta
ggaaacCGAATGTTGATCGTGATCTATGCCAGTTTTTTGGTATACTATCA
GGGGAGTAAAAATTTCCCGAAGGGAGTCATTATTTTCGCGTAAATTTATA
CTCCCGGAAGAAATAATTTCCTGGAAAAGATTACTGGGGAGTAATTATTT
CCCAGTAAATAATGACTGGAGAGTATAAATTTTGGGGAGTAATATTTTAC
TGCGACACCGGGAAATTTGGAATAAAAGAACAGCACAAGGGCGTACCACC
GCGGAATGAATCTgacagtttttttgtttttgagttgTTCATTCTTCGAG
CCATTTCACGCGCCACATAACTTATGAAAGACTACTCAAGAATTCCCAAA
GAGCTCCTTCTCTGGATATCTCAAACATGTTTACTTAAAATCCAGTTACA
ATTTATCCTTTCAAACACAGGTATGAAAAGATACGTCATCGTTAATTCTT
ACGAGAACGTCAAAGAGGGGCTTATCACCAAAGGGCATGAGATGGCTGGA
CGCTCACCAAGACTTAGTCTACTGGTAGCAACTAAAGGACGAAGAACATT
CGGTGCAATGGATTATTCCAAGTCATGGGCTTTCATCAGAAAATTAGCGT
ACAAAAGTTTACATTTATATGGAAGCGGCATGACGAATATTGAAGATATT
GTGACCGATGACGTAGATAAATTGTGCTCCATTATCTCTGGCGAACTTGA
CAAACCTGTTCCTATACAACCATATTTAGGTAACGTCTTGAAAATTGTCT
CTCGTTGAGTTTTACCTTTAAGATTTAAGGATTTTCAGTTGATGAGCCTA
CCACAGTTTTATGGGAACAAATTGCATATGTACTACTACTAGGCGGTTCC
TGTCGTCGCAAACATTATATAGCAAAGATTACTTCTCCTTCTAATACTTA
ATGTTTCAGGCAACACATTGATCAACACCATCTGCCGAAGATGTTTTTCC
ACAAACTACGAGATCGATGATCCTGAATTTCGACATATTCTTGAATTCAC
CGCAAATATTGGCAAAGGAGCTCTTGGTCTGGATATGTGGTTGGCCATGT
TGCCTTGGCTTGTTTATCTCCCACATTTCACCTCGACTGCACAATTCAAA
ATGCTGGTCACAGCAGTGAATCAAAGAAGCGTTATGACTCATCGAATGTT
CGAGGAACACAAGACTACTTTGAATCCAGACAAGCTTCGAGATGTAACTG
ATCAACTTCTCTTTCTATCCTCAAACAAAGAAGCGTGGAAAGATGCCGGC
TTCGAAGAAGTTTCTCAAGACCATCTCGAAAATACagtcaatattttgtt
tttcgcCGGCATTGAAACTTCTCTTACAACACTTCGTTGGTTTTTCCTGT
ATTGCCTACACCACCCAGAATACCAAAAGAAAATGCATGACGAAATTGTG
GATACATTTGGTTTGAGACACCGTCTAACTTATTCAGATCTGGACTCTTT
GCCGTTCACCCAGGCAATGCTGTTTGAAACCAATCGAAAATCTTCAATTG
CTAGAATCAATGTTGCACATAAAGCCATGGTGGATACATCAATCAATGGA
ATCAACATTCCAAAAGGAGCTCCAATACTGTTTAACCTATACAGTCTCCA
CTATGACGAAAATCATTGGGTAAAACCGCACGAGTTCAACCCTCACCGCT
GGTTAAATGCTGATGGAAATTTAAAGAAGGAAAGGGCAACACACTATCTG
CCTTTTTCAGCTGGAACTCGAGTCTGCCTTGGTGAGAAAATGGCTAAAGT
TCAAATGTTTTTGATCACGACGAAATTGATTCGGACTTTCGAGATATGTC
CATATCTTGAAGAGAAGCTACCGGGGTTGGACGAGCGAGGACCAGGAGGA
CCGTATTCACCAGCTACAGACTATAAAGTGATCTTCAAGAGACGGATACA
ATCATAAAACAAACCATAGTGAGCCAACGAACGATATCTTATAAGAAGAA
CTTCACAATAAAGCTCGAATCTCAAGGAGCCAGTAAAACTTTTGCTGCCA
ATTTATCAgacttgcaaaaaaaaaaacgttcagTACAGTGGAAGCTCCGA
AGATCCAACTTCATTTACTTTATTCCTATGATACTGTTTCTTTTTACAAA
TAAGATGAAAAATTTGCAACAAGTTGAATATCTTCTTTATCCCCTCCTCC
TCCTCAACATTTGAGTTGTGGAGACTCTATTGTAGTGATATTTTTATACC
CCAAAAGAATGGCTGTTCGGAAAACTAGAGGATGAATATAAAGGTTttat
ctcaaaaaaatttttcccgttTTATACAcgcatatttcatatcagaaaTA
GACTTTGTGTtgcagtttcaaaattttagatattttttgaattcaaatta
ttattacattcaaagatttttgaattcttcggatgttctcaactttttga
gttttaagcctaaaaatgttcttagcatgttcttattttcaccattttgt
gagtatttttgtccatat Coding sequence (CDS) from alignment at scaffold_456:691418..694485+ >TCONS_00066521 ID=TCONS_00066521|Name=TCONS_00066521|organism=Clytia hemisphaerica|type=CDS|length=4581bp|location=Sequence derived from alignment at scaffold_456:691418..694485+ (Clytia hemisphaerica)
ggtaaaaaaatgtttatttacaTCTTACTAGCAATACCAAGTCTGTTCTT
ACTATGGGTATTAATCACTTATGTGGAACATTTAATCAGTTCGAGGAAAT
ATCCAAAAGGACCATTCCCGCTTCCTCTGATTGGAAACCTGAATTTGCTG
AGTAAAGATTTACACTTGAATTTCTTGGAGATTGGAAAAACGTATGGTGA
CGTGTTCAGTATTAGCATAGGTATGAAAAGATACGTCATCGTTAATTCTT
ACGAGAACGTCAAAGAGGGGCTTATCACCAAAGGGCATGAGATGGCTGGA
CGCTCACCAAGACTTAGTCTACTGGTAGCAACTAAAGGACGAAGAACATT
CGGTGCAATGGATTATTCCAAGTCATGGGCTTTCATCAGAAAATTAGCGT
ACAAAAGTTTACATTTATATGGAAGCGGCATGACGAATATTGAAGATATT
GTGACCGATGACGTAGATAAATTGTGCTCCATTATCTCTGGCGAACTTGA
CAAACCTGTTCCTATACAACCATATTTAGGCAACACATTGATCAACACCA
TCTGCCGAAGATGTTTTTCCACAAACTACGAGATCGATGATCCTGAATTT
CGACATATTCTTGAATTCACCGCAAATATTGGCAAAGGAGCTCTTGGTCT
GGATATGTGGTTGGCCATGTTGCCTTGGCTTGTTTATCTCCCACATTTCA
CCTCGACTGCACAATTCAAAATGCTGGTCACAGCAGTGAATCAAAGAAGC
GTTATGACTCATCGAATGTTCGAGGAACACAAGACTACTTTGAATCCAGA
CAAGCTTCGAGATGTAACTGATCAACTTCTCTTTCTATCCTCAAACAAAG
AAGCGTGGAAAGATGCCGGCTTCGAAGAAGTTTCTCAAGACCATCTCGAA
AATACagtcaatattttgtttttcgcCGGCATTGAAACTTCTCTTACAAC
ACTTCGTTGGTTTTTCCTGTATTGCCTACACCACCCAGAATACCAAAAGA
AAATGCATGACGAAATTGTGGATACATTTGGTTTGAGACACCGTCTAACT
TATTCAGATCTGGACTCTTTGCCGTTCACCCAGGCAATGCTGTTTGAAAC
CAATCGAAAATCTTCAATTGCTAGAATCAATGTTGCACATAAAGCCATGG
TGGATACATCAATCAATGGAATCAACATTCCAAAAGGAGCTCCAATACTG
TTTAACCTATACAGTCTCCACTATGACGAAAATCATTGGGTAAAACCGCA
CGAGTTCAACCCTCACCGCTGGTTAAATGCTGATGGAAATTTAAAGAAGG
AAAGGGCAACACACTATCTGCCTTTTTCAGCTGGAACTCGAGTCTGCCTT
GGTGAGAAAATGGCTAAAGTTCAAATGTTTTTGATCACGACGAAATTGAT
TCGGACTTTCGAGATATGTCCATATCTTGAAGAGAAGCTACCGGGGTTGG
ACGAGCGAGGACCAGGAGGACCGTATTCACCAGCTACAGACTATAAAGTG
ATCTTCAAGAGACGGATACAATCATAAggtaaaaaaatgtttatttacaT
CTTACTAGCAATACCAAGTCTGTTCTTACTATGGGTATTAATCACTTATG
TGGAACATTTAATCAGTTCGAGGAAATATCCAAAAGGACCATTCCCGCTT
CCTCTGATTGGAAACCTGAATTTGCTGAGTAAAGATTTACACTTGAATTT
CTTGGAGATTGGAAAAACGTATGGTGACGTGTTCAGTATTAGCATAGGTA
TGAAAAGATACGTCATCGTTAATTCTTACGAGAACGTCAAAGAGGGGCTT
ATCACCAAAGGGCATGAGATGGCTGGACGCTCACCAAGACTTAGTCTACT
GGTAGCAACTAAAGGACGAAGAACATTCGGTGCAATGGATTATTCCAAGT
CATGGGCTTTCATCAGAAAATTAGCGTACAAAAGTTTACATTTATATGGA
AGCGGCATGACGAATATTGAAGATATTGTGACCGATGACGTAGATAAATT
GTGCTCCATTATCTCTGGCGAACTTGACAAACCTGTTCCTATACAACCAT
ATTTAGGCAACACATTGATCAACACCATCTGCCGAAGATGTTTTTCCACA
AACTACGAGATCGATGATCCTGAATTTCGACATATTCTTGAATTCACCGC
AAATATTGGCAAAGGAGCTCTTGGTCTGGATATGTGGTTGGCCATGTTGC
CTTGGCTTGTTTATCTCCCACATTTCACCTCGACTGCACAATTCAAAATG
CTGGTCACAGCAGTGAATCAAAGAAGCGTTATGACTCATCGAATGTTCGA
GGAACACAAGACTACTTTGAATCCAGACAAGCTTCGAGATGTAACTGATC
AACTTCTCTTTCTATCCTCAAACAAAGAAGCGTGGAAAGATGCCGGCTTC
GAAGAAGTTTCTCAAGACCATCTCGAAAATACagtcaatattttgttttt
cgcCGGCATTGAAACTTCTCTTACAACACTTCGTTGGTTTTTCCTGTATT
GCCTACACCACCCAGAATACCAAAAGAAAATGCATGACGAAATTGTGGAT
ACATTTGGTTTGAGACACCGTCTAACTTATTCAGATCTGGACTCTTTGCC
GTTCACCCAGGCAATGCTGTTTGAAACCAATCGAAAATCTTCAATTGCTA
GAATCAATGTTGCACATAAAGCCATGGTGGATACATCAATCAATGGAATC
AACATTCCAAAAGGAGCTCCAATACTGTTTAACCTATACAGTCTCCACTA
TGACGAAAATCATTGGGTAAAACCGCACGAGTTCAACCCTCACCGCTGGT
TAAATGCTGATGGAAATTTAAAGAAGGAAAGGGCAACACACTATCTGCCT
TTTTCAGCTGGAACTCGAGTCTGCCTTGGTGAGAAAATGGCTAAAGTTCA
AATGTTTTTGATCACGACGAAATTGATTCGGACTTTCGAGATATGTCCAT
ATCTTGAAGAGAAGCTACCGGGGTTGGACGAGCGAGGACCAGGAGGACCG
TATTCACCAGCTACAGACTATAAAGTGATCTTCAAGAGACGGATACAATC
ATAAggtaaaaaaatgtttatttacaTCTTACTAGCAATACCAAGTCTGT
TCTTACTATGGGTATTAATCACTTATGTGGAACATTTAATCAGTTCGAGG
AAATATCCAAAAGGACCATTCCCGCTTCCTCTGATTGGAAACCTGAATTT
GCTGAGTAAAGATTTACACTTGAATTTCTTGGAGATTGGAAAAACGTATG
GTGACGTGTTCAGTATTAGCATAGGTATGAAAAGATACGTCATCGTTAAT
TCTTACGAGAACGTCAAAGAGGGGCTTATCACCAAAGGGCATGAGATGGC
TGGACGCTCACCAAGACTTAGTCTACTGGTAGCAACTAAAGGACGAAGAA
CATTCGGTGCAATGGATTATTCCAAGTCATGGGCTTTCATCAGAAAATTA
GCGTACAAAAGTTTACATTTATATGGAAGCGGCATGACGAATATTGAAGA
TATTGTGACCGATGACGTAGATAAATTGTGCTCCATTATCTCTGGCGAAC
TTGACAAACCTGTTCCTATACAACCATATTTAGGCAACACATTGATCAAC
ACCATCTGCCGAAGATGTTTTTCCACAAACTACGAGATCGATGATCCTGA
ATTTCGACATATTCTTGAATTCACCGCAAATATTGGCAAAGGAGCTCTTG
GTCTGGATATGTGGTTGGCCATGTTGCCTTGGCTTGTTTATCTCCCACAT
TTCACCTCGACTGCACAATTCAAAATGCTGGTCACAGCAGTGAATCAAAG
AAGCGTTATGACTCATCGAATGTTCGAGGAACACAAGACTACTTTGAATC
CAGACAAGCTTCGAGATGTAACTGATCAACTTCTCTTTCTATCCTCAAAC
AAAGAAGCGTGGAAAGATGCCGGCTTCGAAGAAGTTTCTCAAGACCATCT
CGAAAATACagtcaatattttgtttttcgcCGGCATTGAAACTTCTCTTA
CAACACTTCGTTGGTTTTTCCTGTATTGCCTACACCACCCAGAATACCAA
AAGAAAATGCATGACGAAATTGTGGATACATTTGGTTTGAGACACCGTCT
AACTTATTCAGATCTGGACTCTTTGCCGTTCACCCAGGCAATGCTGTTTG
AAACCAATCGAAAATCTTCAATTGCTAGAATCAATGTTGCACATAAAGCC
ATGGTGGATACATCAATCAATGGAATCAACATTCCAAAAGGAGCTCCAAT
ACTGTTTAACCTATACAGTCTCCACTATGACGAAAATCATTGGGTAAAAC
CGCACGAGTTCAACCCTCACCGCTGGTTAAATGCTGATGGAAATTTAAAG
AAGGAAAGGGCAACACACTATCTGCCTTTTTCAGCTGGAACTCGAGTCTG
CCTTGGTGAGAAAATGGCTAAAGTTCAAATGTTTTTGATCACGACGAAAT
TGATTCGGACTTTCGAGATATGTCCATATCTTGAAGAGAAGCTACCGGGG
TTGGACGAGCGAGGACCAGGAGGACCGTATTCACCAGCTACAGACTATAA
AGTGATCTTCAAGAGACGGATACAATCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066521-exon-scaffold_456-1491911889:691418..691639 | TCONS_00066521-exon-scaffold_456-1491911889:691418..691639 | Clytia hemisphaerica | exon |
| TCONS_00066521-exon-scaffold_456-1510915933:691418..691639 | TCONS_00066521-exon-scaffold_456-1510915933:691418..691639 | Clytia hemisphaerica | exon |
| TCONS_00066521-exon-scaffold_456-1575043694:691418..691639 | TCONS_00066521-exon-scaffold_456-1575043694:691418..691639 | Clytia hemisphaerica | exon |
| TCONS_00066521-exon-scaffold_456-1491911889:692438..692746 | TCONS_00066521-exon-scaffold_456-1491911889:692438..692746 | Clytia hemisphaerica | exon |
| TCONS_00066521-exon-scaffold_456-1510915933:692438..692746 | TCONS_00066521-exon-scaffold_456-1510915933:692438..692746 | Clytia hemisphaerica | exon |
| TCONS_00066521-exon-scaffold_456-1575043694:692438..692746 | TCONS_00066521-exon-scaffold_456-1575043694:692438..692746 | Clytia hemisphaerica | exon |
| TCONS_00066521-exon-scaffold_456-1491911889:692927..694485 | TCONS_00066521-exon-scaffold_456-1491911889:692927..694485 | Clytia hemisphaerica | exon |
| TCONS_00066521-exon-scaffold_456-1510915933:692927..694485 | TCONS_00066521-exon-scaffold_456-1510915933:692927..694485 | Clytia hemisphaerica | exon |
| TCONS_00066521-exon-scaffold_456-1575043694:692927..694485 | TCONS_00066521-exon-scaffold_456-1575043694:692927..694485 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_456 | supercontig | scaffold_456:691418..694485 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
BLAST of TCONS_00066521 vs. Swiss-Prot (Human)
Match: CP17A (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.007e-74 Identity = 142/457 (31.07%), Postives = 241/457 (52.74%), Query Frame = 3
Query: 99 KYPKGPFPLPLIGNLNLLSKDLHL--NFLEIGKTYGDVFSISIGMKRYVIVNSYENVKEGLITKGHEMAGRSPRLSLLVATKGRRTFGAMDYSKSWAFIRKLAYKSLHLYGSGMTNIEDIVTDDVDKLCSIISGELDKPVPIQPYLGNTLINTICRRCFSTNYEIDDPEFRHILEFTANIGKGALGLDMWLAMLPWLVYLPHFTSTAQFKMLVTAVNQRSVMTHRMFEEHKTTLNPDKLRDVTDQLL---FLSSNKEAWKDAGFEEVSQDHLENTVNILFFAGIETSLTTLRWFFLYCLHHPEYQKKMHDEIVDTFGLRHRLTYSDLDSLPFTQAMLFETNRKSSIARINVAHKAMVDTSINGINIPKGAPILFNLYSLHYDENHWVKPHEFNPHRWLNADGNLKKERATHYLPFSAGTRVCLGEKMAKVQMFLITTKLIRTFEICPYLEEKLPGLD 1454
KYPK LPL+G+L L + H+ NF ++ K YG ++S+ +G K VIV ++ KE LI KG + +GR +L +A+ R+ D W R+LA + L+ G +E I+ ++ LC +++ + + I + + N I CF+T+Y+ DPE I + I L D + ++PWL P+ T + L + V R+ + +++ E +K D + ++ D L+ S N A D E +S +H+ T+ +F AG+ET+ + ++W + LH+P+ +KK+++EI G T SD + L +A + E R +A + + HKA VD+SI + KG ++ NL++LH++E W +P +F P R+LN G + YLPF AG R C+GE +A+ ++FLI L++ F++ + +LP L+
Sbjct: 26 KYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDN-LSKDSLVDLVPWLKIFPNKT----LEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLE 477
The following BLAST results are available for this feature:
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