TCONS_00066506 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066506
Unique NameTCONS_00066506
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2232

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066506 ID=TCONS_00066506|Name=TCONS_00066506|organism=Clytia hemisphaerica|type=transcript|length=2232bp
GCAAAACAACAATAATGGTAGCATTTTAAATTCCATCGAGATATCATCAA
GAACCTTTCGTGTCGATAGATCCATCAAGATGGCGTCTGGTACCCTATAT
ACCTATTCTGGAAGCTTCAGAGCTAACAAGATTTTGGTCGCTGCTGCATA
TAGTGGTGCTAATGTCACAGTTGCAGATTTTGAATATGGCAAAACCAACA
CATCTGCAGATTTCCTCAAGAAATTCCCGCTTGGAAGAGTCCCAGCTTAT
GAATCCAATGGTTTATGTTTGAGTGAATCTGATGCCATTGCTCAATATGT
CTCAAATGATGCACTACTTGGTGGAAAGGACAGTGCAAACCAAGCTTCTG
TTCGTGAATACATCTCTTTTGCTGAAAACGAGATTGTTCCTTCTGCTTGT
GCTTGGGTTTACCCAACACTTGGACTTCGACAATACAACAAACAAGAAAC
AGACAATGCAATGGCCCACTTGAAAAAGTGTCTTACCAAATTGAATAATG
ACTTACTGACAAGAACTTTCTTGGTAGGAGAGCGCGTTACCCTTGCAGAC
ATTACATTATGTACAAGTCTTGTTATGTTATATGTTCAGGTTATGGATAG
TAAATTTAGAGAAGCTTTTGGAAATTTAAACAGGTGGTTCACAACTTGTG
TAAACCAAcctaatttcaaaaaagttcttGGCGATATCAAATTGTGTGAA
AAAATGGCCACATTTGACAATAAAAGATATCAGGAATTACACCCTAAAGG
tggaaaaggaaagaaaactgaagaaaaagccaaaaagacaaaggaagcAA
AACCAAAACCACAAGAGCAGCCAATTGAAGAAGCAGCAAAAGAACCCAAA
AAAGTAGACCACTTCAAAGACTGGAAAAAGAGTGATAAATTCAATATGGA
TGCCTGGAAAACTGAATACGCTAATGAAGAGTTGTCTGACTCACTTAAAT
GGTTTGACGAGCACTGGGACCCTGAAGCATTCGCAGTTTATCATGCACAA
TACAGATTTGAAAAAGACTCTGACTATGAGACATACAACTTAGAATTCCT
TGCAACAAATTTGGTTAGAGGCTTCTATCAACGTATCGAGGGACTCCGCA
AACACTGTCACATTGTGTTTTTATTTCATGAGAAAAAGTCACCTAAAGGC
GCAAAATACTATGACATGACAGGTTGTATCATTCAAAAAGCACAACCTCT
CTGCTTTTCAtacGATGAAATATGGAATGAATTTTCTCAATCATTCACGT
GGACCAAACTTGGAGGAGCTGATGTGAACAAATATGTCAAAGCTTATTTT
AGTGGAGAACATCCCGATGGTACTGACGTAGTGAACTTTGACGAATTCAG
ATAAATAACACGCGTCACCTTATCGTCTCTTTGATTGGTGTTGGTATTTG
TCACCTTGGCTCACGTGTTCCGTTATCTATCGAAATGGACAAATCTAAAT
TAAATTAACTACCTGAAATATAAATGAATTTCTGTTAATAGAACCAAAAC
gtctgtttctttatttttctgttgCCTTAAACATATTTTGATCTTGAGTG
AAAGCGGCAGTGTTGGATCATAACAAAGCCCTTACACGGGTTTCTTTTAT
GGGTCCTCGGGTATAACTGTTGGTCAGCAACACAtgcaatagcgagttta
tgtatttgcacttttgaggacggtaaagtgactgaagcgatttggaaaaa
cccgcagctCTGACCCGCAAAaccgaggacggtaaaagtgctgatttacc
gtcgtcctcagttaatcaggatctagtcaaattagaaccttaccgtctcc
atcgctgaaaaacacacataaactcggtaatatgGGTTCAAACATATCTA
TATTTTGAGAATCTGATTCTGACTAGCTAACCAGGGGGCGATAACTTTTC
AATTTCAGAGGGGGTGTTTCGAGGGTACTTGACAATCGTTTTTGGAACCG
ATTTGCCTGAGTTAGGGTACTGCACTGCATTTCAAGATATCTCATGAGCT
ACATATCAAAACCTACTAAAACTTTGTAGAATTTGTAAGATCGCCCGACT
TTTTTTAGTGAAAGCACTTGCATAGTGGCCAGTGAcccttgaaacaccct
tgaaaatttccttgaaaCCCTTAAAAATATTAAGATTTTCTGAAGACCCT
TGAGCTATGGAATTTacacccttgaaacccttgaattcAGAAATCTGGAA
GGGATTTTGTTCATTAAGAACTtgtaaaatgc
Run BLAST on NCBI

transcript from alignment at scaffold_456:383313..394889+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066506 ID=TCONS_00066506|Name=TCONS_00066506|organism=Clytia hemisphaerica|type=transcript|length=11577bp|location=Sequence derived from alignment at scaffold_456:383313..394889+ (Clytia hemisphaerica)
GCAAAACAACAATAATGGTAGCATTTTAAATTCCATCGAGATATCATCAA
GAACCTTTCGTGTCGATAGATCCATCAAGATGGCGTCTGGTGTAAGTAAT
GAATCTTCTTATATCCTCGTGATCTCTAGTTTAACAGGTCTAATTAAACG
TTTGAAATATTCAAGGATGTCCATTTTTTCTCATAGACCCTATATACCTA
TTCTGGAAGCTTCAGAGCTAACAAGATTTTGGTCGCTGCTGCATATAGTG
GTGCTAATGTCACAGTTGCAGATTTTGAATATGGCAAAACCAACACATCT
GCAGATTTCCTCAAGAAATTCCCGCTTGGAAGAGTGAGTTGATATTGTTT
TCTCGGTTTTTCCCGGTTCTTGAGTGTTTGGTGGGGATCTTGCAGATAAC
TTAGTCTAAACTTTGCAGATTAACCTATATAGGGGAGCCATTcacccaga
cggtgtcaatcaaacgccgaatcaattgaacgcaattgaataattgcaat
tcgattgtcgaacgcaatcgaatcgcaatcgaatattacccaggatttgc
tgttcgattacttcgattacgttcgattgtattcgactacgctcgattga
ttcaattatattatattttattcGCTTTGTGGTACGGTACTAAAACATTC
GGCAGCCCGCTAAAAAGCCCTAAAACGAAGTGATCCAATTTCATTTAATT
aaactcatcaaacataatcCTAATTGAACGAAATCGTCGAATGCAAATGA
CAATCGAACATAgttcaactatcaatcgaaccaatcaaacctttcaaacg
caatcgaacacaatcgaatattacccaggaatcagccgttcgattgagat
tcgattacgtttgacaatcgaatcgcaattattcaatCGCGTTtgaataa
ggaactcgataaggaactttgaggctgaaattctctgtaaaaataaggaa
ctccaggctcagagaaAGGTTAAGGttcctttttaaataaaaacgtgtaa
aggAAAACTTGAAGCGAATGGTGATTTAGAAAAGGGCTTGGCTAACGTAA
AAATTTCCGACATTATGTTTTGAAGGTGAATTGATCGGGCAACGCAAACA
GAACATATTATTGATGGTCGCCATAAATTTCTGGAATTATCTCGGCTCta
taatatatattattattatattttacTTTGATGGATCTGGATTAATCTTA
TACTTCCATTTCTTTAAAAGCCTGATAGCCTTTTTGTGGATATTTATTCT
AGATATTTGTGATTTGTCTTGTCCTTTTGTTTGGTGGGTTATGTTATCTG
TGTTTCAATTTGAAGAGTTGATGGTTTCATACGTCTAGACTATTACAGCG
TCAGATAATAAAATCAGAGCCGTCTGCAAAAAACTTGTGCCTGTGTGGGC
AGTCAAGCAAAGAGAACTTCAGACAAAACAANGATAATAAAATCAGAGCT
GTCTGCCAAAGACTTGTGCCTGTGTGGGCAGTCAAGCAAAGAgaacttca
gaaaaaaaaaacggaaGGTTTATTTTGGTTTTGGCCATTCCAGAACATTT
TTGTTACCCTCGTCAGACAACATACATTTCATAGAAATCCAGCAACCTAA
TCAGATTTTATGGTAGTTTGTTTTTGACGGGTCAGATCTGACCCATCACG
GATCCAAAGggttaaataagcaaaaattatCTTTCTATCAAGCAAAGTGg
caaatttatttcaatttaagAATCTTATCTTAGTCTAGGAATAGGTTTTT
GAGTATCAATACCTGTCAATATACacatttcaaattaaattttcccGTAG
CTTttgctttgatcccatgtaattTGCAAGAAAAATTAAGTAAACAAAAC
CATTCTTCCATTTTGGCATACTCCATGGGTCACTataacaaaacatgaaa
atgatCGACAATTAAATAatcttatttcttttattgaatttataaataaa
aaaacatttatctgtCAACATTTTATAAGGCATTCAAGGCTTgtgtttac
ttgattttttttcactgtGTATTGATCATCGTTCAACTTGTATTGAATTG
TATAGAATGGGAGAGTGTGGCTTAGTGACATAAGGGTCAACCCTCCTCCT
GACGGGCAAATGCtgtgaaaaaatatgaaatcataTCAAAGGTCCCTTAC
ACATACACAAAGTAACCCTGATTGATAGTTTTTGTCCATACCTGTTTGAG
ACAGCTTTTTAACATGAACTTAAATGTATTTCAAACTGCTACCTTGAAGA
TAAAGCCTACCACTCGTATGGCACAGCAGATAAGGTgaagcaaacaaata
tttgatTTCAGCCTTACTGCggtaaatttggagattttgaaattcaatgc
aTACTTTTTAGGTCCCAGCTTATGAATCCAATGGTTTATGTTTGAGTGAA
TCTGATGCCATTGCTCAATATGTCTCAAATGATGCACTACTTGGTGGAAA
GGACAGTGCAAACCAAGCTTCTGTTCGTGAATACATCTCTTTTGCTGAAA
ACGAGATTGTTCCTTCTGCTTGTGCTTGGGTTTACCCAACACTTGGACTT
CGACAATACAACAAACAAGAAACAGACAATGCAATGGCCCACTTGAAAAA
GTGTCTTACCAAATTGAATAATGACTTACTGACAAGAACTTTCTTGGTAG
GAGAGCGCGTTACCCTTGCAGACATTACATTATGTACAAGTCTTGTTATG
TTATATGTTCAGGTAAGATATGTATCTTGGGTAATCATTTCAAGGTCCAA
TAGATTGAAAAGCTAAattgaatatttgaaaattcaggaaagAATTAGTA
CCAAGCTTTCTTTTATATAATTGCCCTATCCTTCAGCACAATCCTCCATG
TCAGGAcaagaaattttaatatttgtgtgaatggtttttgaagattttga
tttattGCTGATTCTATTTACTTTCTATTACTTCTCTTTTACTGTAGGTT
ATGGATAGTAAATTTAGAGAAGCTTTTGGAAATTTAAACAGGTGGTTCAC
AACTTGTGTAAACCAAcctaatttcaaaaaagttcttGGCGATATCAAAT
TGTGTGAAAAAATGGCCACATTTGACAATAAAAGATATCAGGAATTACAC
CCTAAAGGTATGAATTTTATCACATTTCTTTGAGGATAGATAAGTAATCA
TCATAAATATGGTCAAATCAAAgatgataaagaaaaaaatactctTTTAC
CGGAAAGACAGCAAATAATTTATTTAGTTTTAAGTTAATTCTCTTTCAAC
AAGGGTGTAGAGTAAAATCTAAAGAAGAAAaggcaatttttaattttgag
ttgattttgtgaATTTCAGCATGTTTATATCTTGTTGCAACATACTTATT
TGCCTTTTCAGCAGGtggaaaaggaaagaaaactgaagaaaaagccaaaa
agacaaaggaagcAAAACCAAAACCACAAGAGCAGCCAATTGAAGAAGCA
GCAAAAGAACCCAAAAAAGTAGACCACTTCAAAGACTGGAAAAAGAGGTA
TAATTTATTACACAAACTTAACCCTATAATCATTACTAGGCTTTGAGAGG
CTGTTCAAAACTAGTGAGACTTTTCCTGTACTGTTTAAACTTTTGATGTA
ATTACTCTTCCTGGAATTCCtagagaattttcacatgaaaaaatggctta
gagggacaaatacttcttggattggcttgaaacatttttcctttgactta
ttagtcatTTAACAGGCTAAAaggtgccataaaagttacattttattcaa
agtttgaagttttaaagatttcctattttgtcaataatttttcgtgagca
taaacttCGCCCTtgctaaaattttaaaagacatttacgtttgcaaaaag
gGCCAAATTTCTGCTCGTGAAAGTTTTTACGCCTAAATACTTAAAATGCT
TTGCAAACGTGGAGAAATTTAGTCTGTGGTGCTCATTTTTTACCTTGCTT
CGCTCAAAAAGTAATAGCGAAGCTCCTTAAATTTATAATTCAAACCCTGA
TTTGAGATGAAAAATTGCACTGGAAATTTGTCAATTTGaatgacacctta
ctgtcaaaATTGTCATCATGTTCAAGGAGTGAGAACTTTTAGGTGTCAAA
AGTTATTTTATTGtgaagctaaataaaatgtAGGGGTTAACAAAATATTA
ATGTCAAAAGATCTATTATGAGTTAATAACAAAAGTTTCACcctctgaat
ttctgttgttctatctctttCGTATTTGacgactatttgttgatcaagaa
atcaatAATGTAGCATCGTTGATGGTAAATTGTATTAGTTTGttgttaat
acttacttctcagtgcgttttaggcattaatgatatgcccttgataatac
acttgtattataaaatcattgtaaaggaaaaatcaacactaagaaattca
aacaagcacaaaatggctgggctgaaagaactcaaaaattaatgaggtgc
ctcgaaatgccttcacaatatttcattGAAATccttttagaaatcaatga
aaaagtacatcaagataattctgtgaaaatttcaagccagcgctttcctg
tagaacaataaaagaaaatccatcttgtaagaaaaaaaaattaagaaaat
gatTTTGCTAAACAGCTCAAAATGGAAAGTTGTTTGGTTTATTTGAAAgg
accatgaacatataaacgactctACATCTTTTCAACAAAAGCCTCTGTTC
TTTTACTCTTATCAGTAGTGTGTCACATTCAAACGAGGCAGggtattttt
cgagttcagaaATTGCAAATTGATAGCCTAAAAGATTCGTAGAGATAGCT
CATAGAACTAGAAAAAATAACGACACTTACTTTTGTCatttatcattgga
attgacactttttaataaagattttgaaactATAAAATATAATGGTTCTT
AAGTCACTTCAATCAAGAATCAcatttatactcaatgtgatgctggaaat
ataaatggatacgaattgacagtagaaaatagcttttGATACTCTCAGCG
CACTCTAATATTACATTTACAttcaaaatcgtacttttgatgtatgttta
tTATTTTCTGGTAGCCGGTAACTTTTCAACTTCCCAACTGAAACTAGTAA
CTTCCCAACTCGAAAGTAGCAACTAGCAACTTGACTAGAATTGTTCCCTA
ACTCCAGTCAAACTTTGGCATACTATTTTTCGAGTTGTGAAATAATCATT
GGggtgacaaaagtgattcaaaagtatacaagCAGTTGGAATTCTGCATT
TCAGcattgaaaaatgttgataaaatatattgcaaatttaggaaaaaatt
agagaaaaattcttttgtgaattaAGAGTAATGCTCAAGCTGTTAATCAG
CAATCAAGCTGATAAGCTAAGTAATTCAAGGAAATAAAATTGTGATGGAA
TATTGctgattttttatacaaaatttcaacaggctgcaacgaagctcgct
tcaaagagacaatggAAGATAGGCGCCTGGtagtttatatgttcatgaga
GGAGTAACTAGTGAACAAAAATATTGATAGTCTTAATACTTCAGATGAGT
TGGGCAGAAAGATTTTCTACGTTTTGGGACGGTTGACTATTTAACTTTCT
CTAAAAAGTAAGAAAGAACAATTTCTTTAGAACCAGGGGGGTACAGAgac
agggtactaacccatagggtactaacttgattttttactaaaattttgtt
tagtaccacccacccatatttagtaccgggtactacttcatttttgctaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCTATTGTTAGTTTTTCAGACTGAAAATTGACAGATAATTCAAGCAA
ACTATCAATGATGGAGTCAgaagcttttgtcctttgattttcatcacaca
cttcttgactattttggaagttttgtcttctaaaaaatctaaaaaatttc
tcaaaagagtaaaaaaaatttgtcgattaaaaaagtttcaaatcaaaaaa
attaatatttgaaaaaagtcaaaatattacaacaaactacttttttattg
aaaaacagcaaaattctgtgaaaaaggACCCAAATAGTATCCTTGAAGAG
TACTTGcttgaagagtgaaaaatacacacccccaccccaaagtagtaccg
ggtactaactttgctatgggtcagtaccctatgtctgtaccccccccccc
tcttagaACAGTTTCTTTGCACTTGAGTTACAAATTCTTgtaattttcaa
ttcatttctTTTAGTGATAAATTCAATATGGATGCCTGGAAAACTGAATA
CGCTAATGAAGAGTTGTCTGACTCACTTAAATGGTTTGACGAGCACTGGG
ACCCTGAAGCATTCGCAGTTTATCATGCACAATACAGATTTGAAAAAGAC
TCTGACTATGAGACATACAACTTAGAATTCCTTGCAACAAATTTGGTTAG
AGGCTTCTATCAACGTATCGAGGGACTCCGCAAACACTGTCACATTGTGT
TTTTATTTCATGAGAAAAAGTCACCTAAAGGCGCAAAATACTATGACATG
ACAGGTTGTATCATTCAAAAAGCACAACCTCTCTGCTTTTCAGTAAGTTT
CCTTTTCATTATGTACTCCAtctttattatcattattacaaCAAATACAA
AGTTCAGGCATGCTGTGGTCCTCTAGAATTGGTCTTCGTTTATTTATATA
TAATAAATAGCCTAGTTCATGATTTGCCTTTGTCTTGTTTGAATTTTCCT
TGAACGTTTTTATTGATGATGCTTCTGCCATCTTGAGATCGTTCTGTTGG
CTTTGGTCACCGTGTACTCCGTCATCTGGGAAATTCGTCTGAAGCTTGGT
TATATGCTTTCTACATGGTCAcgttcttttaataaaattttggacctacc
tggaggtcctataaattaacccatgccCATgcatttgttcattttttcct
actattcctttgtgtttttttttcacacaaaaacattgataacaatgccc
atcatcaagcatgattcaactttctaaaaatcactGGAACAGCCGAAAAT
CGCTGAAAAACGGTTCCTCTTGAATTTTTCGAGctgtacatatttttttc
tgggaattttgcacactgatgcaaaatagcAATACCCAAAATGTAACGGA
GCCTGACACAGTTTttactaccgggtgacccacgaaaaagttcggacgtt
tctcggcgtcttgaggccgaacaaatgtcccaaagtgcttggagttttat
tatttagaaagtagNAAAATACACACCCCCACCCCCaaagtagtaccggg
tactaactttgctatgggtcagtaccctgtgtctgtacccccccccctgt
tagaACAGTTTCTTTGCACTTGAGTTACAAATTCTTgtaattttcaattc
atttctTTTAGTGATAAATTCAATATGGATGCCTGGAAAACTGAATACGC
TAATGAAGAGTTGTCTGACTCACTTAAATGGTTTGACGAGCACTGGGACC
CTGAAGCATTCGCAGTTTATCATGCACAATACAGATTTGAAAAAGACTCT
GACTATGAGACATACAACTTAGAATTCCTTGCAACAAATTTGGTTAGAGG
CTTCTATCAACGTATCGAGGGACTCCGCAAACACTGTCACATTGTGTTTT
TATTTCATGAGAAAAAGTCACCTAAAGGCGCAAAATACTATGACATGACA
GGTTGTATCATTCAAAAAGCACAACCTCTCTGCTTTTCAGTAAGTTTCCC
TTTCATTATGTACTCCAtctttattatcattattacaaCAAATACAAAGT
TCAGGCATGCTGTGGGCCTCTAGAATTGGTCTTCGTTTATTTATATATAA
TAAATAGCCTAGTTCATGATTTGGCTTTGCCTTGTTTAAATTTTCCTTGA
ACGTTTTTATTGATGATGCTTCTGCCATCTTGAGATCGTTCTGTTGGCTT
TGTGCACCGTGTACTCCGTCATCTGGGAAATTCGTCTGAAGCTTGTGTAT
ATGCCTTCTACATGGTCACGTTCTTTTAATAAagttttggacctacctgg
aggtcctataaattaacccatgccCATGCATTTGTTCAGTTTGTActatt
tctttgtgtttttttttcgcacaaaaacattgataacaatgcccatcatc
aagcatgattcaactttctaaaaatcgctggAACAGCCGAAAATCGCCGA
AAAACGGTTCCTCTTGAATTTTTCGAGctgtacatatttttttctgggaa
ttttgcacactgatgcaatatagCAATACCCAAAATGTAACGGAGCCTGA
CACAGTTTTTactattttctcaattttccaTCATCAGCTTTTTCTAATAT
GTGTTACAATGTTATGTATTCATGCAATTTTAATTATCAGGTAGGGCTCC
CTTACATTTTAGGTGTTGCCATTTTCCAGTCAGCGTTCTGACTTGTTTGG
TGTTGTTTCACTATCATAGATGTTGATATGCTTATATACCTGGACCATGT
CacggaaaaaagtttttgcaaCTCAAGGGATGCCAAGCGTCTTGTCTTTC
TGCATAACCGTGAGATTGGTTTTACTAGTTTTGTCGCACGTCTTTGGACA
CCCTCAATCAGGTTGATAGATCGACGTAATCTTGGTGGCAATACTGATTG
AGCGTACTCTAAATGTTGTCGTACAAAGGTGGTATACAGTGTCTGGAAAA
TGTGAGGTCTTGAAATCGCCTTTGGATCAATCCCAACATGGAATtagctt
tgtttatttttttttagcgATGTGTTCTTCAAATGAAAGCTCCGAGTCTA
TCAAAACACAAATTGACCTATCGATAAAATGTGACATTTGTCTGGGTAGA
ATTTCGACAGCCACTCACGGGACTACTCTCAAGTGCTTCAATGTCGTATT
GTACTGTTAGGGAGTCAAGAATGGAATTGATTTCCTTCTTAATCTTTGTG
TCGTTTGCAACCAAGAAAATGTTTGATAGAACATGTTCTGGTAGTTCATT
AATATAAATAACAAAGAGCAGAGGACTGAGCACGCTTCCTTGAGGAATAT
CACTGGATCTAGAGATGATTTTACCCCATTAACACTCGCTAATTGCTTGC
GGTTCGATTGAAAAGATTGGTTGCAATTCAAAGTTGATTCGTTAATCACG
TAGCGTTATAGTTTCATCATAAGTCTTCGATGGGGTACCGTGTCAAATGC
TTTGGCAAAGTCGAAGTATATGCAGCCGACCACATCCACTTTTTGCAGTT
GATTTGAACACATCTATAAAGGAGATGAGTTGTTCGACTGTTGACCTTTT
TCTGATGAAACTGTATTGCTTGTTCGATAGAAGTTCTTCGCTGAAAAGGT
GTCCCATGATATGTTTTCGTATTATTGTTTCCGTCAACTTACAGACTACT
GAAGTCAGACTTACTGGACGATAGTTAAAAGCAAGGTTGTGTGCTCTTTT
GTTTTTATGGATCGGTGTCACAAATGCTAATTCCCAGTCACAAAAAGAGT
TAAATTCATTAATAGTGGTTCTGTAATGTGATCACAAAGTTCAATAAACA
TCGAGGCAtgaatttattgatttattcGCAATGAGCTTCCTGATTTGTTT
TGTTATCATTTCCTTTGTAATGTTTAGTGGTTAAAGTATTTTATCAAAAT
CAGGTAGATCACCTTCCGGTTCTTCAGTAAAGGCACTACGGAATAGTTGC
TGCAGAATGTTGACCTTTTCTTGGTCCTCATGCTTTACGGATGTCTTGTC
ATCGGACGTTTCAAAAAGAGGAGAACTCCACTTTtgggacctacctggag
gtcctataaactAACTTGTgttcgtctgtccgtccgttcgtctgttacca
acttttctcatgATTGAATCATagaaaacatttgatttttggtataaaGG
TGCAAAATGCTAGTGGACAAAATATGACGGagtctgattttggaaaaaaa
atcttttgacttttgaaaaattggatcattaaatttttttctttcttgta
tgaaagaagggtaccatcataggttaGAGTTAGCCAATGTTCTAAGCTAA
tagtataaattttttttgacttttataaCGATGTAAACTATTAGCTTAGT
TGCAAACAAACTCGGTAAAAACAAGCTTGCCTTTGCCGAAGACTTATTGT
ATTCTCAAGAccaattaaaaattacaaacttttttgcttttgcaCCGCGT
TATTTTACCAAAACAATCAGAAAcgacaaatttttgttttgattgcgaGA
GAAAATACTAGAATCTGATTGGATGCGATAAAACGAACCGCAGCGAGTGT
TGTTTCTCGAAAGAATTTCTGGTGTCACGATTTAAATCTTACTGCTTACC
TAAACTTTCAGATTCATTTGCTGATtcattcacaatttttttttattttt
tttagtacGATGAAATATGGAATGAATTTTCTCAATCATTCACGTGGACC
AAACTTGGAGGAGCTGATGTGAACAAATATGTCAAAGCTTATTTTAGTGG
AGAACATCCCGATGGTACTGACGTAGTGAACTTTGACGAATTCAGATAAA
TAACACGCGTCACCTTATCGTCTCTTTGATTGGTGTTGGTATTTGTCACC
TTGGCTCACGTGTTCCGTTATCTATCGAAATGGACAAATCTAAATTAAAT
TAACTACCTGAAATATAAATGAATTTCTGTTAATAGAACCAAAACgtctg
tttctttatttttctgttgCCTTAAACATATTTTGATCTTGAGTGAAAGC
GGCAGTGTTGGATCATAACAAAGCCCTTACACGGGTTTCTTTTATGGGTC
CTCGGGTATAACTGTTGGTCAGCAACACAtgcaatagcgagtttatgtat
ttgcacttttgaggacggtaaagtgactgaagcgatttggaaaaacccgc
agctCTGACCCGCAAAaccgaggacggtaaaagtgctgatttaccgtcgt
cctcagttaatcaggatctagtcaaattagaaccttaccgtctccatcgc
tgaaaaacacacataaactcggtaatatgGGTTCAAACATATCTATATTT
TGAGAATCTGATTCTGACTAGCTAACCAGGGGGCGATAACTTTTCAATTT
CAGAGGGGGTGTTTCGAGGGTACTTGACAATCGTTTTTGGAACCGATTTG
CCTGAGTTAGGGTACTGCACTGCATTTCAAGATATCTCATGAGCTACATA
TCAAAACCTACTAAAACTTTGTAGAATTTGTAAGATCGCCCGACTTTTTT
TAGTGAAAGCACTTGCATAGTGGCCAGTGAcccttgaaacacccttgaaa
atttccttgaaaCCCTTAAAAATATTAAGATTTTCTGAAGACCCTTGAGC
TATGGAATTTacacccttgaaacccttgaattcAGAAATCTGGAAGGGAT
TTTGTTCATTAAGAACTtgtaaaatgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041610XLOC_041610Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066506-exon-scaffold_456-1491911889:383313..383403TCONS_00066506-exon-scaffold_456-1491911889:383313..383403Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1510915933:383313..383403TCONS_00066506-exon-scaffold_456-1510915933:383313..383403Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1575043694:383313..383403TCONS_00066506-exon-scaffold_456-1575043694:383313..383403Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1491911889:383499..383645TCONS_00066506-exon-scaffold_456-1491911889:383499..383645Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1510915933:383499..383645TCONS_00066506-exon-scaffold_456-1510915933:383499..383645Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1575043694:383499..383645TCONS_00066506-exon-scaffold_456-1575043694:383499..383645Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1491911889:385674..386024TCONS_00066506-exon-scaffold_456-1491911889:385674..386024Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1510915933:385674..386024TCONS_00066506-exon-scaffold_456-1510915933:385674..386024Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1575043694:385674..386024TCONS_00066506-exon-scaffold_456-1575043694:385674..386024Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1491911889:386260..386419TCONS_00066506-exon-scaffold_456-1491911889:386260..386419Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1510915933:386260..386419TCONS_00066506-exon-scaffold_456-1510915933:386260..386419Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1575043694:386260..386419TCONS_00066506-exon-scaffold_456-1575043694:386260..386419Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1491911889:386677..386809TCONS_00066506-exon-scaffold_456-1491911889:386677..386809Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1510915933:386677..386809TCONS_00066506-exon-scaffold_456-1510915933:386677..386809Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1575043694:386677..386809TCONS_00066506-exon-scaffold_456-1575043694:386677..386809Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1491911889:390874..391201TCONS_00066506-exon-scaffold_456-1491911889:390874..391201Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1510915933:390874..391201TCONS_00066506-exon-scaffold_456-1510915933:390874..391201Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1575043694:390874..391201TCONS_00066506-exon-scaffold_456-1575043694:390874..391201Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1491911889:393868..394889TCONS_00066506-exon-scaffold_456-1491911889:393868..394889Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1510915933:393868..394889TCONS_00066506-exon-scaffold_456-1510915933:393868..394889Clytia hemisphaericaexon
TCONS_00066506-exon-scaffold_456-1575043694:393868..394889TCONS_00066506-exon-scaffold_456-1575043694:393868..394889Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:383313..394889 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.9131	61.8154	43.2581	39.537	20.5931	11.1647	25.9273	25.3604	72.0195	56.3427	113.934	90.2247	160.466	117.931	90.7603	89.3792	67.9308	90.2246	45.9668	63.6724	73.9029	91.1485	41.8439	65.565	19.1879	27.5721	47.9007	91.6072	52.0802	61.1625
Blast
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BLAST of TCONS_00066506 vs. Swiss-Prot (Human)
Match: EF1G (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 301.212 bits (770), Expect = 2.951e-93
Identity = 181/433 (41.80%), Postives = 263/433 (60.74%), Query Frame = 2 
Query:   80 MASGTLYTYSGSFRANKILVAAAYSGANVTV----ADFEYGKTNTSADFLKKFPLGRVPAYESN-GLCLSESDAIAQYVSNDALLGGKDSANQASVREYISFAENEIVPSACAWVYPTLGLRQYNKQETDNAMAHLKKCLTKLNNDLLTRTFLVGERVTLADITLCTSLVMLYVQVMDSKFREAFGNLNRWFTTCVNQPNFKKVLGDIKLCEKMATFDNKRYQELHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XKEPKKVDHFKDWKKSDKFNMDAWKTEYANEE-LSDSLKWFDEHWDPEAFAVYHAQYRFEKDSDYETYNLEFLATNLVRGFYQRIEGLRKHCHI-VFLFHEKKSPKGAKYYDMTGCIIQKAQPLCFSYDEIWNEFSQSFTWTKL--GGADVNKYVKAYFSGE 1309
            MA+GTLYTY  ++RA K L+AA YSGA V V      F +G+TN + +FL+KFP G+VPA+E + G C+ ES+AIA YVSN+ L G    A  A V +++SFA+++IVP A  WV+PTLG+  +NKQ T+NA   +++ L  L+  L TRTFLVGERVTLADIT+  +L+ LY QV++  FR+AF N NRWF TC+NQP F+ VLG++KLCEKMA FD K++ E  PK    +K +   ++ ++ + + +E+    A              A EPK  D F    KS  F +D +K +Y+NE+ LS +L +F EH+D + +++++++YRF      E     F++ NL+ G +QR++ LRK+    V LF    S        ++G  + + Q L F     W    +S+TW KL  G  +    V+ YFS E
Sbjct:    1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEA-AAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKST-FVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFP-----EELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNS------SSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420
The following BLAST results are available for this feature:
BLAST of TCONS_00066506 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EF1G2.951e-9341.80Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G... [more]
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