TCONS_00066504 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066504
Unique Name	TCONS_00066504
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2283

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_456:383265..394889+

transcript sequence

>TCONS_00066504 ID=TCONS_00066504|Name=TCONS_00066504|organism=Clytia hemisphaerica|type=transcript|length=2283bp
AAACTATGTCACCTAATCTTCTCGGCTACCGTCAGATTACAAGGTAAAGC
AAAACAACAATAATGGTAGCATTTTAAATTCCATCGAGATATCATCAAGA
ACCTTTCGTGTCGATAGATCCATCAAGATGGCGTCTGGTACCCTATATAC
CTATTCTGGAAGCTTCAGAGCTAACAAGATTTTGGTCGCTGCTGCATATA
GTGGTGCTAATGTCACAGTTGCAGATTTTGAATATGGCAAAACCAACACA
TCTGCAGATTTCCTCAAGAAATTCCCGCTTGGAAGAGTCCCAGCTTATGA
ATCCAATGGTTTATGTTTGAGTGAATCTGATGCCATTGCTCAATATGTCT
CAAATGATGCACTACTTGGTGGAAAGGACAGTGCAAACCAAGCTTCTGTT
CGTGAATACATCTCTTTTGCTGAAAACGAGATTGTTCCTTCTGCTTGTGC
TTGGGTTTACCCAACACTTGGACTTCGACAATACAACAAACAAGAAACAG
ACAATGCAATGGCCCACTTGAAAAAGTGTCTTACCAAATTGAATAATGAC
TTACTGACAAGAACTTTCTTGGTAGGAGAGCGCGTTACCCTTGCAGACAT
TACATTATGTACAAGTCTTGTTATGTTATATGTTCAGGTTATGGATAGTA
AATTTAGAGAAGCTTTTGGAAATTTAAACAGGTGGTTCACAACTTGTGTA
AACCAAcctaatttcaaaaaagttcttGGCGATATCAAATTGTGTGAAAA
AATGGCCACATTTGACAATAAAAGATATCAGGAATTACACCCTAAAGCAG
GtggaaaaggaaagaaaactgaagaaaaagccaaaaagacaaaggaagcA
AAACCAAAACCACAAGAGCAGCCAATTGAAGAAGCAGCAAAAGAACCCAA
AAAAGTAGACCACTTCAAAGACTGGAAAAAGAGTGATAAATTCAATATGG
ATGCCTGGAAAACTGAATACGCTAATGAAGAGTTGTCTGACTCACTTAAA
TGGTTTGACGAGCACTGGGACCCTGAAGCATTCGCAGTTTATCATGCACA
ATACAGATTTGAAAAAGACTCTGACTATGAGACATACAACTTAGAATTCC
TTGCAACAAATTTGGTTAGAGGCTTCTATCAACGTATCGAGGGACTCCGC
AAACACTGTCACATTGTGTTTTTATTTCATGAGAAAAAGTCACCTAAAGG
CGCAAAATACTATGACATGACAGGTTGTATCATTCAAAAAGCACAACCTC
TCTGCTTTTCAtacGATGAAATATGGAATGAATTTTCTCAATCATTCACG
TGGACCAAACTTGGAGGAGCTGATGTGAACAAATATGTCAAAGCTTATTT
TAGTGGAGAACATCCCGATGGTACTGACGTAGTGAACTTTGACGAATTCA
GATAAATAACACGCGTCACCTTATCGTCTCTTTGATTGGTGTTGGTATTT
GTCACCTTGGCTCACGTGTTCCGTTATCTATCGAAATGGACAAATCTAAA
TTAAATTAACTACCTGAAATATAAATGAATTTCTGTTAATAGAACCAAAA
CgtctgtttctttatttttctgttgCCTTAAACATATTTTGATCTTGAGT
GAAAGCGGCAGTGTTGGATCATAACAAAGCCCTTACACGGGTTTCTTTTA
TGGGTCCTCGGGTATAACTGTTGGTCAGCAACACAtgcaatagcgagttt
atgtatttgcacttttgaggacggtaaagtgactgaagcgatttggaaaa
acccgcagctCTGACCCGCAAAaccgaggacggtaaaagtgctgatttac
cgtcgtcctcagttaatcaggatctagtcaaattagaaccttaccgtctc
catcgctgaaaaacacacataaactcggtaatatgGGTTCAAACATATCT
ATATTTTGAGAATCTGATTCTGACTAGCTAACCAGGGGGCGATAACTTTT
CAATTTCAGAGGGGGTGTTTCGAGGGTACTTGACAATCGTTTTTGGAACC
GATTTGCCTGAGTTAGGGTACTGCACTGCATTTCAAGATATCTCATGAGC
TACATATCAAAACCTACTAAAACTTTGTAGAATTTGTAAGATCGCCCGAC
TTTTTTTAGTGAAAGCACTTGCATAGTGGCCAGTGAcccttgaaacaccc
ttgaaaatttccttgaaaCCCTTAAAAATATTAAGATTTTCTGAAGACCC
TTGAGCTATGGAATTTacacccttgaaacccttgaattcAGAAATCTGGA
AGGGATTTTGTTCATTAAGAACTtgtaaaatgc

Run BLAST on NCBI

transcript from alignment at scaffold_456:383265..394889+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066504 ID=TCONS_00066504|Name=TCONS_00066504|organism=Clytia hemisphaerica|type=transcript|length=11625bp|location=Sequence derived from alignment at scaffold_456:383265..394889+ (Clytia hemisphaerica)
AAACTATGTCACCTAATCTTCTCGGCTACCGTCAGATTACAAGGTAAAGC
AAAACAACAATAATGGTAGCATTTTAAATTCCATCGAGATATCATCAAGA
ACCTTTCGTGTCGATAGATCCATCAAGATGGCGTCTGGTGTAAGTAATGA
ATCTTCTTATATCCTCGTGATCTCTAGTTTAACAGGTCTAATTAAACGTT
TGAAATATTCAAGGATGTCCATTTTTTCTCATAGACCCTATATACCTATT
CTGGAAGCTTCAGAGCTAACAAGATTTTGGTCGCTGCTGCATATAGTGGT
GCTAATGTCACAGTTGCAGATTTTGAATATGGCAAAACCAACACATCTGC
AGATTTCCTCAAGAAATTCCCGCTTGGAAGAGTGAGTTGATATTGTTTTC
TCGGTTTTTCCCGGTTCTTGAGTGTTTGGTGGGGATCTTGCAGATAACTT
AGTCTAAACTTTGCAGATTAACCTATATAGGGGAGCCATTcacccagacg
gtgtcaatcaaacgccgaatcaattgaacgcaattgaataattgcaattc
gattgtcgaacgcaatcgaatcgcaatcgaatattacccaggatttgctg
ttcgattacttcgattacgttcgattgtattcgactacgctcgattgatt
caattatattatattttattcGCTTTGTGGTACGGTACTAAAACATTCGG
CAGCCCGCTAAAAAGCCCTAAAACGAAGTGATCCAATTTCATTTAATTaa
actcatcaaacataatcCTAATTGAACGAAATCGTCGAATGCAAATGACA
ATCGAACATAgttcaactatcaatcgaaccaatcaaacctttcaaacgca
atcgaacacaatcgaatattacccaggaatcagccgttcgattgagattc
gattacgtttgacaatcgaatcgcaattattcaatCGCGTTtgaataagg
aactcgataaggaactttgaggctgaaattctctgtaaaaataaggaact
ccaggctcagagaaAGGTTAAGGttcctttttaaataaaaacgtgtaaag
gAAAACTTGAAGCGAATGGTGATTTAGAAAAGGGCTTGGCTAACGTAAAA
ATTTCCGACATTATGTTTTGAAGGTGAATTGATCGGGCAACGCAAACAGA
ACATATTATTGATGGTCGCCATAAATTTCTGGAATTATCTCGGCTCtata
atatatattattattatattttacTTTGATGGATCTGGATTAATCTTATA
CTTCCATTTCTTTAAAAGCCTGATAGCCTTTTTGTGGATATTTATTCTAG
ATATTTGTGATTTGTCTTGTCCTTTTGTTTGGTGGGTTATGTTATCTGTG
TTTCAATTTGAAGAGTTGATGGTTTCATACGTCTAGACTATTACAGCGTC
AGATAATAAAATCAGAGCCGTCTGCAAAAAACTTGTGCCTGTGTGGGCAG
TCAAGCAAAGAGAACTTCAGACAAAACAANGATAATAAAATCAGAGCTGT
CTGCCAAAGACTTGTGCCTGTGTGGGCAGTCAAGCAAAGAgaacttcaga
aaaaaaaaacggaaGGTTTATTTTGGTTTTGGCCATTCCAGAACATTTTT
GTTACCCTCGTCAGACAACATACATTTCATAGAAATCCAGCAACCTAATC
AGATTTTATGGTAGTTTGTTTTTGACGGGTCAGATCTGACCCATCACGGA
TCCAAAGggttaaataagcaaaaattatCTTTCTATCAAGCAAAGTGgca
aatttatttcaatttaagAATCTTATCTTAGTCTAGGAATAGGTTTTTGA
GTATCAATACCTGTCAATATACacatttcaaattaaattttcccGTAGCT
TttgctttgatcccatgtaattTGCAAGAAAAATTAAGTAAACAAAACCA
TTCTTCCATTTTGGCATACTCCATGGGTCACTataacaaaacatgaaaat
gatCGACAATTAAATAatcttatttcttttattgaatttataaataaaaa
aacatttatctgtCAACATTTTATAAGGCATTCAAGGCTTgtgtttactt
gattttttttcactgtGTATTGATCATCGTTCAACTTGTATTGAATTGTA
TAGAATGGGAGAGTGTGGCTTAGTGACATAAGGGTCAACCCTCCTCCTGA
CGGGCAAATGCtgtgaaaaaatatgaaatcataTCAAAGGTCCCTTACAC
ATACACAAAGTAACCCTGATTGATAGTTTTTGTCCATACCTGTTTGAGAC
AGCTTTTTAACATGAACTTAAATGTATTTCAAACTGCTACCTTGAAGATA
AAGCCTACCACTCGTATGGCACAGCAGATAAGGTgaagcaaacaaatatt
tgatTTCAGCCTTACTGCggtaaatttggagattttgaaattcaatgcaT
ACTTTTTAGGTCCCAGCTTATGAATCCAATGGTTTATGTTTGAGTGAATC
TGATGCCATTGCTCAATATGTCTCAAATGATGCACTACTTGGTGGAAAGG
ACAGTGCAAACCAAGCTTCTGTTCGTGAATACATCTCTTTTGCTGAAAAC
GAGATTGTTCCTTCTGCTTGTGCTTGGGTTTACCCAACACTTGGACTTCG
ACAATACAACAAACAAGAAACAGACAATGCAATGGCCCACTTGAAAAAGT
GTCTTACCAAATTGAATAATGACTTACTGACAAGAACTTTCTTGGTAGGA
GAGCGCGTTACCCTTGCAGACATTACATTATGTACAAGTCTTGTTATGTT
ATATGTTCAGGTAAGATATGTATCTTGGGTAATCATTTCAAGGTCCAATA
GATTGAAAAGCTAAattgaatatttgaaaattcaggaaagAATTAGTACC
AAGCTTTCTTTTATATAATTGCCCTATCCTTCAGCACAATCCTCCATGTC
AGGAcaagaaattttaatatttgtgtgaatggtttttgaagattttgatt
tattGCTGATTCTATTTACTTTCTATTACTTCTCTTTTACTGTAGGTTAT
GGATAGTAAATTTAGAGAAGCTTTTGGAAATTTAAACAGGTGGTTCACAA
CTTGTGTAAACCAAcctaatttcaaaaaagttcttGGCGATATCAAATTG
TGTGAAAAAATGGCCACATTTGACAATAAAAGATATCAGGAATTACACCC
TAAAGGTATGAATTTTATCACATTTCTTTGAGGATAGATAAGTAATCATC
ATAAATATGGTCAAATCAAAgatgataaagaaaaaaatactctTTTACCG
GAAAGACAGCAAATAATTTATTTAGTTTTAAGTTAATTCTCTTTCAACAA
GGGTGTAGAGTAAAATCTAAAGAAGAAAaggcaatttttaattttgagtt
gattttgtgaATTTCAGCATGTTTATATCTTGTTGCAACATACTTATTTG
CCTTTTCAGCAGGtggaaaaggaaagaaaactgaagaaaaagccaaaaag
acaaaggaagcAAAACCAAAACCACAAGAGCAGCCAATTGAAGAAGCAGC
AAAAGAACCCAAAAAAGTAGACCACTTCAAAGACTGGAAAAAGAGGTATA
ATTTATTACACAAACTTAACCCTATAATCATTACTAGGCTTTGAGAGGCT
GTTCAAAACTAGTGAGACTTTTCCTGTACTGTTTAAACTTTTGATGTAAT
TACTCTTCCTGGAATTCCtagagaattttcacatgaaaaaatggcttaga
gggacaaatacttcttggattggcttgaaacatttttcctttgacttatt
agtcatTTAACAGGCTAAAaggtgccataaaagttacattttattcaaag
tttgaagttttaaagatttcctattttgtcaataatttttcgtgagcata
aacttCGCCCTtgctaaaattttaaaagacatttacgtttgcaaaaaggG
CCAAATTTCTGCTCGTGAAAGTTTTTACGCCTAAATACTTAAAATGCTTT
GCAAACGTGGAGAAATTTAGTCTGTGGTGCTCATTTTTTACCTTGCTTCG
CTCAAAAAGTAATAGCGAAGCTCCTTAAATTTATAATTCAAACCCTGATT
TGAGATGAAAAATTGCACTGGAAATTTGTCAATTTGaatgacaccttact
gtcaaaATTGTCATCATGTTCAAGGAGTGAGAACTTTTAGGTGTCAAAAG
TTATTTTATTGtgaagctaaataaaatgtAGGGGTTAACAAAATATTAAT
GTCAAAAGATCTATTATGAGTTAATAACAAAAGTTTCACcctctgaattt
ctgttgttctatctctttCGTATTTGacgactatttgttgatcaagaaat
caatAATGTAGCATCGTTGATGGTAAATTGTATTAGTTTGttgttaatac
ttacttctcagtgcgttttaggcattaatgatatgcccttgataatacac
ttgtattataaaatcattgtaaaggaaaaatcaacactaagaaattcaaa
caagcacaaaatggctgggctgaaagaactcaaaaattaatgaggtgcct
cgaaatgccttcacaatatttcattGAAATccttttagaaatcaatgaaa
aagtacatcaagataattctgtgaaaatttcaagccagcgctttcctgta
gaacaataaaagaaaatccatcttgtaagaaaaaaaaattaagaaaatga
tTTTGCTAAACAGCTCAAAATGGAAAGTTGTTTGGTTTATTTGAAAggac
catgaacatataaacgactctACATCTTTTCAACAAAAGCCTCTGTTCTT
TTACTCTTATCAGTAGTGTGTCACATTCAAACGAGGCAGggtatttttcg
agttcagaaATTGCAAATTGATAGCCTAAAAGATTCGTAGAGATAGCTCA
TAGAACTAGAAAAAATAACGACACTTACTTTTGTCatttatcattggaat
tgacactttttaataaagattttgaaactATAAAATATAATGGTTCTTAA
GTCACTTCAATCAAGAATCAcatttatactcaatgtgatgctggaaatat
aaatggatacgaattgacagtagaaaatagcttttGATACTCTCAGCGCA
CTCTAATATTACATTTACAttcaaaatcgtacttttgatgtatgtttatT
ATTTTCTGGTAGCCGGTAACTTTTCAACTTCCCAACTGAAACTAGTAACT
TCCCAACTCGAAAGTAGCAACTAGCAACTTGACTAGAATTGTTCCCTAAC
TCCAGTCAAACTTTGGCATACTATTTTTCGAGTTGTGAAATAATCATTGG
ggtgacaaaagtgattcaaaagtatacaagCAGTTGGAATTCTGCATTTC
AGcattgaaaaatgttgataaaatatattgcaaatttaggaaaaaattag
agaaaaattcttttgtgaattaAGAGTAATGCTCAAGCTGTTAATCAGCA
ATCAAGCTGATAAGCTAAGTAATTCAAGGAAATAAAATTGTGATGGAATA
TTGctgattttttatacaaaatttcaacaggctgcaacgaagctcgcttc
aaagagacaatggAAGATAGGCGCCTGGtagtttatatgttcatgagaGG
AGTAACTAGTGAACAAAAATATTGATAGTCTTAATACTTCAGATGAGTTG
GGCAGAAAGATTTTCTACGTTTTGGGACGGTTGACTATTTAACTTTCTCT
AAAAAGTAAGAAAGAACAATTTCTTTAGAACCAGGGGGGTACAGAgacag
ggtactaacccatagggtactaacttgattttttactaaaattttgttta
gtaccacccacccatatttagtaccgggtactacttcatttttgctaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCTATTGTTAGTTTTTCAGACTGAAAATTGACAGATAATTCAAGCAAAC
TATCAATGATGGAGTCAgaagcttttgtcctttgattttcatcacacact
tcttgactattttggaagttttgtcttctaaaaaatctaaaaaatttctc
aaaagagtaaaaaaaatttgtcgattaaaaaagtttcaaatcaaaaaaat
taatatttgaaaaaagtcaaaatattacaacaaactacttttttattgaa
aaacagcaaaattctgtgaaaaaggACCCAAATAGTATCCTTGAAGAGTA
CTTGcttgaagagtgaaaaatacacacccccaccccaaagtagtaccggg
tactaactttgctatgggtcagtaccctatgtctgtaccccccccccctc
ttagaACAGTTTCTTTGCACTTGAGTTACAAATTCTTgtaattttcaatt
catttctTTTAGTGATAAATTCAATATGGATGCCTGGAAAACTGAATACG
CTAATGAAGAGTTGTCTGACTCACTTAAATGGTTTGACGAGCACTGGGAC
CCTGAAGCATTCGCAGTTTATCATGCACAATACAGATTTGAAAAAGACTC
TGACTATGAGACATACAACTTAGAATTCCTTGCAACAAATTTGGTTAGAG
GCTTCTATCAACGTATCGAGGGACTCCGCAAACACTGTCACATTGTGTTT
TTATTTCATGAGAAAAAGTCACCTAAAGGCGCAAAATACTATGACATGAC
AGGTTGTATCATTCAAAAAGCACAACCTCTCTGCTTTTCAGTAAGTTTCC
TTTTCATTATGTACTCCAtctttattatcattattacaaCAAATACAAAG
TTCAGGCATGCTGTGGTCCTCTAGAATTGGTCTTCGTTTATTTATATATA
ATAAATAGCCTAGTTCATGATTTGCCTTTGTCTTGTTTGAATTTTCCTTG
AACGTTTTTATTGATGATGCTTCTGCCATCTTGAGATCGTTCTGTTGGCT
TTGGTCACCGTGTACTCCGTCATCTGGGAAATTCGTCTGAAGCTTGGTTA
TATGCTTTCTACATGGTCAcgttcttttaataaaattttggacctacctg
gaggtcctataaattaacccatgccCATgcatttgttcattttttcctac
tattcctttgtgtttttttttcacacaaaaacattgataacaatgcccat
catcaagcatgattcaactttctaaaaatcactGGAACAGCCGAAAATCG
CTGAAAAACGGTTCCTCTTGAATTTTTCGAGctgtacatatttttttctg
ggaattttgcacactgatgcaaaatagcAATACCCAAAATGTAACGGAGC
CTGACACAGTTTttactaccgggtgacccacgaaaaagttcggacgtttc
tcggcgtcttgaggccgaacaaatgtcccaaagtgcttggagttttatta
tttagaaagtagNAAAATACACACCCCCACCCCCaaagtagtaccgggta
ctaactttgctatgggtcagtaccctgtgtctgtacccccccccctgtta
gaACAGTTTCTTTGCACTTGAGTTACAAATTCTTgtaattttcaattcat
ttctTTTAGTGATAAATTCAATATGGATGCCTGGAAAACTGAATACGCTA
ATGAAGAGTTGTCTGACTCACTTAAATGGTTTGACGAGCACTGGGACCCT
GAAGCATTCGCAGTTTATCATGCACAATACAGATTTGAAAAAGACTCTGA
CTATGAGACATACAACTTAGAATTCCTTGCAACAAATTTGGTTAGAGGCT
TCTATCAACGTATCGAGGGACTCCGCAAACACTGTCACATTGTGTTTTTA
TTTCATGAGAAAAAGTCACCTAAAGGCGCAAAATACTATGACATGACAGG
TTGTATCATTCAAAAAGCACAACCTCTCTGCTTTTCAGTAAGTTTCCCTT
TCATTATGTACTCCAtctttattatcattattacaaCAAATACAAAGTTC
AGGCATGCTGTGGGCCTCTAGAATTGGTCTTCGTTTATTTATATATAATA
AATAGCCTAGTTCATGATTTGGCTTTGCCTTGTTTAAATTTTCCTTGAAC
GTTTTTATTGATGATGCTTCTGCCATCTTGAGATCGTTCTGTTGGCTTTG
TGCACCGTGTACTCCGTCATCTGGGAAATTCGTCTGAAGCTTGTGTATAT
GCCTTCTACATGGTCACGTTCTTTTAATAAagttttggacctacctggag
gtcctataaattaacccatgccCATGCATTTGTTCAGTTTGTActatttc
tttgtgtttttttttcgcacaaaaacattgataacaatgcccatcatcaa
gcatgattcaactttctaaaaatcgctggAACAGCCGAAAATCGCCGAAA
AACGGTTCCTCTTGAATTTTTCGAGctgtacatatttttttctgggaatt
ttgcacactgatgcaatatagCAATACCCAAAATGTAACGGAGCCTGACA
CAGTTTTTactattttctcaattttccaTCATCAGCTTTTTCTAATATGT
GTTACAATGTTATGTATTCATGCAATTTTAATTATCAGGTAGGGCTCCCT
TACATTTTAGGTGTTGCCATTTTCCAGTCAGCGTTCTGACTTGTTTGGTG
TTGTTTCACTATCATAGATGTTGATATGCTTATATACCTGGACCATGTCa
cggaaaaaagtttttgcaaCTCAAGGGATGCCAAGCGTCTTGTCTTTCTG
CATAACCGTGAGATTGGTTTTACTAGTTTTGTCGCACGTCTTTGGACACC
CTCAATCAGGTTGATAGATCGACGTAATCTTGGTGGCAATACTGATTGAG
CGTACTCTAAATGTTGTCGTACAAAGGTGGTATACAGTGTCTGGAAAATG
TGAGGTCTTGAAATCGCCTTTGGATCAATCCCAACATGGAATtagctttg
tttatttttttttagcgATGTGTTCTTCAAATGAAAGCTCCGAGTCTATC
AAAACACAAATTGACCTATCGATAAAATGTGACATTTGTCTGGGTAGAAT
TTCGACAGCCACTCACGGGACTACTCTCAAGTGCTTCAATGTCGTATTGT
ACTGTTAGGGAGTCAAGAATGGAATTGATTTCCTTCTTAATCTTTGTGTC
GTTTGCAACCAAGAAAATGTTTGATAGAACATGTTCTGGTAGTTCATTAA
TATAAATAACAAAGAGCAGAGGACTGAGCACGCTTCCTTGAGGAATATCA
CTGGATCTAGAGATGATTTTACCCCATTAACACTCGCTAATTGCTTGCGG
TTCGATTGAAAAGATTGGTTGCAATTCAAAGTTGATTCGTTAATCACGTA
GCGTTATAGTTTCATCATAAGTCTTCGATGGGGTACCGTGTCAAATGCTT
TGGCAAAGTCGAAGTATATGCAGCCGACCACATCCACTTTTTGCAGTTGA
TTTGAACACATCTATAAAGGAGATGAGTTGTTCGACTGTTGACCTTTTTC
TGATGAAACTGTATTGCTTGTTCGATAGAAGTTCTTCGCTGAAAAGGTGT
CCCATGATATGTTTTCGTATTATTGTTTCCGTCAACTTACAGACTACTGA
AGTCAGACTTACTGGACGATAGTTAAAAGCAAGGTTGTGTGCTCTTTTGT
TTTTATGGATCGGTGTCACAAATGCTAATTCCCAGTCACAAAAAGAGTTA
AATTCATTAATAGTGGTTCTGTAATGTGATCACAAAGTTCAATAAACATC
GAGGCAtgaatttattgatttattcGCAATGAGCTTCCTGATTTGTTTTG
TTATCATTTCCTTTGTAATGTTTAGTGGTTAAAGTATTTTATCAAAATCA
GGTAGATCACCTTCCGGTTCTTCAGTAAAGGCACTACGGAATAGTTGCTG
CAGAATGTTGACCTTTTCTTGGTCCTCATGCTTTACGGATGTCTTGTCAT
CGGACGTTTCAAAAAGAGGAGAACTCCACTTTtgggacctacctggaggt
cctataaactAACTTGTgttcgtctgtccgtccgttcgtctgttaccaac
ttttctcatgATTGAATCATagaaaacatttgatttttggtataaaGGTG
CAAAATGCTAGTGGACAAAATATGACGGagtctgattttggaaaaaaaat
cttttgacttttgaaaaattggatcattaaatttttttctttcttgtatg
aaagaagggtaccatcataggttaGAGTTAGCCAATGTTCTAAGCTAAta
gtataaattttttttgacttttataaCGATGTAAACTATTAGCTTAGTTG
CAAACAAACTCGGTAAAAACAAGCTTGCCTTTGCCGAAGACTTATTGTAT
TCTCAAGAccaattaaaaattacaaacttttttgcttttgcaCCGCGTTA
TTTTACCAAAACAATCAGAAAcgacaaatttttgttttgattgcgaGAGA
AAATACTAGAATCTGATTGGATGCGATAAAACGAACCGCAGCGAGTGTTG
TTTCTCGAAAGAATTTCTGGTGTCACGATTTAAATCTTACTGCTTACCTA
AACTTTCAGATTCATTTGCTGATtcattcacaatttttttttattttttt
tagtacGATGAAATATGGAATGAATTTTCTCAATCATTCACGTGGACCAA
ACTTGGAGGAGCTGATGTGAACAAATATGTCAAAGCTTATTTTAGTGGAG
AACATCCCGATGGTACTGACGTAGTGAACTTTGACGAATTCAGATAAATA
ACACGCGTCACCTTATCGTCTCTTTGATTGGTGTTGGTATTTGTCACCTT
GGCTCACGTGTTCCGTTATCTATCGAAATGGACAAATCTAAATTAAATTA
ACTACCTGAAATATAAATGAATTTCTGTTAATAGAACCAAAACgtctgtt
tctttatttttctgttgCCTTAAACATATTTTGATCTTGAGTGAAAGCGG
CAGTGTTGGATCATAACAAAGCCCTTACACGGGTTTCTTTTATGGGTCCT
CGGGTATAACTGTTGGTCAGCAACACAtgcaatagcgagtttatgtattt
gcacttttgaggacggtaaagtgactgaagcgatttggaaaaacccgcag
ctCTGACCCGCAAAaccgaggacggtaaaagtgctgatttaccgtcgtcc
tcagttaatcaggatctagtcaaattagaaccttaccgtctccatcgctg
aaaaacacacataaactcggtaatatgGGTTCAAACATATCTATATTTTG
AGAATCTGATTCTGACTAGCTAACCAGGGGGCGATAACTTTTCAATTTCA
GAGGGGGTGTTTCGAGGGTACTTGACAATCGTTTTTGGAACCGATTTGCC
TGAGTTAGGGTACTGCACTGCATTTCAAGATATCTCATGAGCTACATATC
AAAACCTACTAAAACTTTGTAGAATTTGTAAGATCGCCCGACTTTTTTTA
GTGAAAGCACTTGCATAGTGGCCAGTGAcccttgaaacacccttgaaaat
ttccttgaaaCCCTTAAAAATATTAAGATTTTCTGAAGACCCTTGAGCTA
TGGAATTTacacccttgaaacccttgaattcAGAAATCTGGAAGGGATTT
TGTTCATTAAGAACTtgtaaaatgc

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041610	XLOC_041610	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_456	supercontig	scaffold_456:383265..394889 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
619.717	620.095	541.99	492.668	271.529	207.629	376.326	408.325	510.372	430.357	605.74	638.483	688.203	699.01	614.204	620.924	496.27	636.413	333.31	383.169	665.448	663.386	590.585	596.02	520.663	594.098	530.121	620.474	444.904	501.283

Blast

[Close]

BLAST of TCONS_00066504 vs. Swiss-Prot (Human)
Match: EF1G (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 308.916 bits (790), Expect = 5.190e-96
Identity = 185/433 (42.73%), Postives = 263/433 (60.74%), Query Frame = 2

Query:  128 MASGTLYTYSGSFRANKILVAAAYSGANVTV----ADFEYGKTNTSADFLKKFPLGRVPAYESN-GLCLSESDAIAQYVSNDALLGGKDSANQASVREYISFAENEIVPSACAWVYPTLGLRQYNKQETDNAMAHLKKCLTKLNNDLLTRTFLVGERVTLADITLCTSLVMLYVQVMDSKFREAFGNLNRWFTTCVNQPNFKKVLGDIKLCEKMATFDNKRYQELHXXXXXXXXXXXXXXXXXXXXXXXXQEQ------PIEEA-------AKEPKKVDHFKDWKKSDKFNMDAWKTEYANEE-LSDSLKWFDEHWDPEAFAVYHAQYRFEKDSDYETYNLEFLATNLVRGFYQRIEGLRKHCHI-VFLFHEKKSPKGAKYYDMTGCIIQKAQPLCFSYDEIWNEFSQSFTWTKL--GGADVNKYVKAYFSGE 1360
            MA+GTLYTY  ++RA K L+AA YSGA V V      F +G+TN + +FL+KFP G+VPA+E + G C+ ES+AIA YVSN+ L G    A  A V +++SFA+++IVP A  WV+PTLG+  +NKQ T+NA   +++ L  L+  L TRTFLVGERVTLADIT+  +L+ LY QV++  FR+AF N NRWF TC+NQP F+ VLG++KLCEKMA FD K++ E  PK     K+   + +K K    + +E+      P EE        A EPK  D F    KS  F +D +K +Y+NE+ LS +L +F EH+D + +++++++YRF      E     F++ NL+ G +QR++ LRK+    V LF    S        ++G  + + Q L F     W    +S+TW KL  G  +    V+ YFS E
Sbjct:    1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEA-AAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKST-FVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFP-----EELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNS------SSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420

The following BLAST results are available for this feature:

BLAST of TCONS_00066504 vs. Swiss-Prot (Human)

BLAST of TCONS_00066504 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
EF1G	5.190e-96	42.73	Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G...	[more]

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TCONS_00066504 (transcript) - C. hemisphaerica

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