TCONS_00066501 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066501
Unique NameTCONS_00066501
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066501 ID=TCONS_00066501|Name=TCONS_00066501|organism=Clytia hemisphaerica|type=transcript|length=2367bp
aaattgacccaccacggtactaagtgTCATGGGTGtcgtgtactaactgc
ttgccccccctggctttacagatatctgtggtgaAAACTATGTCACCTAA
TCTTCTCGGCTACCGTCAGATTACAAGGTAAAGCAAAACAACAATAATGG
TAGCATTTTAAATTCCATCGAGATATCATCAAGAACCTTTCGTGTCGATA
GATCCATCAAGATGGCGTCTGGTACCCTATATACCTATTCTGGAAGCTTC
AGAGCTAACAAGATTTTGGTCGCTGCTGCATATAGTGGTGCTAATGTCAC
AGTTGCAGATTTTGAATATGGCAAAACCAACACATCTGCAGATTTCCTCA
AGAAATTCCCGCTTGGAAGAGTCCCAGCTTATGAATCCAATGGTTTATGT
TTGAGTGAATCTGATGCCATTGCTCAATATGTCTCAAATGATGCACTACT
TGGTGGAAAGGACAGTGCAAACCAAGCTTCTGTTCGTGAATACATCTCTT
TTGCTGAAAACGAGATTGTTCCTTCTGCTTGTGCTTGGGTTTACCCAACA
CTTGGACTTCGACAATACAACAAACAAGAAACAGACAATGCAATGGCCCA
CTTGAAAAAGTGTCTTACCAAATTGAATAATGACTTACTGACAAGAACTT
TCTTGGTAGGAGAGCGCGTTACCCTTGCAGACATTACATTATGTACAAGT
CTTGTTATGTTATATGTTCAGGTTATGGATAGTAAATTTAGAGAAGCTTT
TGGAAATTTAAACAGGTGGTTCACAACTTGTGTAAACCAAcctaatttca
aaaaagttcttGGCGATATCAAATTGTGTGAAAAAATGGCCACATTTGAC
AATAAAAGATATCAGGAATTACACCCTAAAGCAGGtggaaaaggaaagaa
aactgaagaaaaagccaaaaagacaaaggaagcAAAACCAAAACCACAAG
AGCAGCCAATTGAAGAAGCAGCAAAAGAACCCAAAAAAGTAGACCACTTC
AAAGACTGGAAAAAGAGTGATAAATTCAATATGGATGCCTGGAAAACTGA
ATACGCTAATGAAGAGTTGTCTGACTCACTTAAATGGTTTGACGAGCACT
GGGACCCTGAAGCATTCGCAGTTTATCATGCACAATACAGATTTGAAAAA
GACTCTGACTATGAGACATACAACTTAGAATTCCTTGCAACAAATTTGGT
TAGAGGCTTCTATCAACGTATCGAGGGACTCCGCAAACACTGTCACATTG
TGTTTTTATTTCATGAGAAAAAGTCACCTAAAGGCGCAAAATACTATGAC
ATGACAGGTTGTATCATTCAAAAAGCACAACCTCTCTGCTTTTCAtacGA
TGAAATATGGAATGAATTTTCTCAATCATTCACGTGGACCAAACTTGGAG
GAGCTGATGTGAACAAATATGTCAAAGCTTATTTTAGTGGAGAACATCCC
GATGGTACTGACGTAGTGAACTTTGACGAATTCAGATAAATAACACGCGT
CACCTTATCGTCTCTTTGATTGGTGTTGGTATTTGTCACCTTGGCTCACG
TGTTCCGTTATCTATCGAAATGGACAAATCTAAATTAAATTAACTACCTG
AAATATAAATGAATTTCTGTTAATAGAACCAAAACgtctgtttctttatt
tttctgttgCCTTAAACATATTTTGATCTTGAGTGAAAGCGGCAGTGTTG
GATCATAACAAAGCCCTTACACGGGTTTCTTTTATGGGTCCTCGGGTATA
ACTGTTGGTCAGCAACACAtgcaatagcgagtttatgtatttgcactttt
gaggacggtaaagtgactgaagcgatttggaaaaacccgcagctCTGACC
CGCAAAaccgaggacggtaaaagtgctgatttaccgtcgtcctcagttaa
tcaggatctagtcaaattagaaccttaccgtctccatcgctgaaaaacac
acataaactcggtaatatgGGTTCAAACATATCTATATTTTGAGAATCTG
ATTCTGACTAGCTAACCAGGGGGCGATAACTTTTCAATTTCAGAGGGGGT
GTTTCGAGGGTACTTGACAATCGTTTTTGGAACCGATTTGCCTGAGTTAG
GGTACTGCACTGCATTTCAAGATATCTCATGAGCTACATATCAAAACCTA
CTAAAACTTTGTAGAATTTGTAAGATCGCCCGACTTTTTTTAGTGAAAGC
ACTTGCATAGTGGCCAGTGAcccttgaaacacccttgaaaatttccttga
aaCCCTTAAAAATATTAAGATTTTCTGAAGACCCTTGAGCTATGGAATTT
acacccttgaaacccttgaattcAGAAATCTGGAAGGGATTTTGTTCATT
AAGAACTtgtaaaatgc
Run BLAST on NCBI

transcript from alignment at scaffold_456:383181..394889+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066501 ID=TCONS_00066501|Name=TCONS_00066501|organism=Clytia hemisphaerica|type=transcript|length=11709bp|location=Sequence derived from alignment at scaffold_456:383181..394889+ (Clytia hemisphaerica)
aaattgacccaccacggtactaagtgTCATGGGTGtcgtgtactaactgc
ttgccccccctggctttacagatatctgtggtgaAAACTATGTCACCTAA
TCTTCTCGGCTACCGTCAGATTACAAGGTAAAGCAAAACAACAATAATGG
TAGCATTTTAAATTCCATCGAGATATCATCAAGAACCTTTCGTGTCGATA
GATCCATCAAGATGGCGTCTGGTGTAAGTAATGAATCTTCTTATATCCTC
GTGATCTCTAGTTTAACAGGTCTAATTAAACGTTTGAAATATTCAAGGAT
GTCCATTTTTTCTCATAGACCCTATATACCTATTCTGGAAGCTTCAGAGC
TAACAAGATTTTGGTCGCTGCTGCATATAGTGGTGCTAATGTCACAGTTG
CAGATTTTGAATATGGCAAAACCAACACATCTGCAGATTTCCTCAAGAAA
TTCCCGCTTGGAAGAGTGAGTTGATATTGTTTTCTCGGTTTTTCCCGGTT
CTTGAGTGTTTGGTGGGGATCTTGCAGATAACTTAGTCTAAACTTTGCAG
ATTAACCTATATAGGGGAGCCATTcacccagacggtgtcaatcaaacgcc
gaatcaattgaacgcaattgaataattgcaattcgattgtcgaacgcaat
cgaatcgcaatcgaatattacccaggatttgctgttcgattacttcgatt
acgttcgattgtattcgactacgctcgattgattcaattatattatattt
tattcGCTTTGTGGTACGGTACTAAAACATTCGGCAGCCCGCTAAAAAGC
CCTAAAACGAAGTGATCCAATTTCATTTAATTaaactcatcaaacataat
cCTAATTGAACGAAATCGTCGAATGCAAATGACAATCGAACATAgttcaa
ctatcaatcgaaccaatcaaacctttcaaacgcaatcgaacacaatcgaa
tattacccaggaatcagccgttcgattgagattcgattacgtttgacaat
cgaatcgcaattattcaatCGCGTTtgaataaggaactcgataaggaact
ttgaggctgaaattctctgtaaaaataaggaactccaggctcagagaaAG
GTTAAGGttcctttttaaataaaaacgtgtaaaggAAAACTTGAAGCGAA
TGGTGATTTAGAAAAGGGCTTGGCTAACGTAAAAATTTCCGACATTATGT
TTTGAAGGTGAATTGATCGGGCAACGCAAACAGAACATATTATTGATGGT
CGCCATAAATTTCTGGAATTATCTCGGCTCtataatatatattattatta
tattttacTTTGATGGATCTGGATTAATCTTATACTTCCATTTCTTTAAA
AGCCTGATAGCCTTTTTGTGGATATTTATTCTAGATATTTGTGATTTGTC
TTGTCCTTTTGTTTGGTGGGTTATGTTATCTGTGTTTCAATTTGAAGAGT
TGATGGTTTCATACGTCTAGACTATTACAGCGTCAGATAATAAAATCAGA
GCCGTCTGCAAAAAACTTGTGCCTGTGTGGGCAGTCAAGCAAAGAGAACT
TCAGACAAAACAANGATAATAAAATCAGAGCTGTCTGCCAAAGACTTGTG
CCTGTGTGGGCAGTCAAGCAAAGAgaacttcagaaaaaaaaaacggaaGG
TTTATTTTGGTTTTGGCCATTCCAGAACATTTTTGTTACCCTCGTCAGAC
AACATACATTTCATAGAAATCCAGCAACCTAATCAGATTTTATGGTAGTT
TGTTTTTGACGGGTCAGATCTGACCCATCACGGATCCAAAGggttaaata
agcaaaaattatCTTTCTATCAAGCAAAGTGgcaaatttatttcaattta
agAATCTTATCTTAGTCTAGGAATAGGTTTTTGAGTATCAATACCTGTCA
ATATACacatttcaaattaaattttcccGTAGCTTttgctttgatcccat
gtaattTGCAAGAAAAATTAAGTAAACAAAACCATTCTTCCATTTTGGCA
TACTCCATGGGTCACTataacaaaacatgaaaatgatCGACAATTAAATA
atcttatttcttttattgaatttataaataaaaaaacatttatctgtCAA
CATTTTATAAGGCATTCAAGGCTTgtgtttacttgattttttttcactgt
GTATTGATCATCGTTCAACTTGTATTGAATTGTATAGAATGGGAGAGTGT
GGCTTAGTGACATAAGGGTCAACCCTCCTCCTGACGGGCAAATGCtgtga
aaaaatatgaaatcataTCAAAGGTCCCTTACACATACACAAAGTAACCC
TGATTGATAGTTTTTGTCCATACCTGTTTGAGACAGCTTTTTAACATGAA
CTTAAATGTATTTCAAACTGCTACCTTGAAGATAAAGCCTACCACTCGTA
TGGCACAGCAGATAAGGTgaagcaaacaaatatttgatTTCAGCCTTACT
GCggtaaatttggagattttgaaattcaatgcaTACTTTTTAGGTCCCAG
CTTATGAATCCAATGGTTTATGTTTGAGTGAATCTGATGCCATTGCTCAA
TATGTCTCAAATGATGCACTACTTGGTGGAAAGGACAGTGCAAACCAAGC
TTCTGTTCGTGAATACATCTCTTTTGCTGAAAACGAGATTGTTCCTTCTG
CTTGTGCTTGGGTTTACCCAACACTTGGACTTCGACAATACAACAAACAA
GAAACAGACAATGCAATGGCCCACTTGAAAAAGTGTCTTACCAAATTGAA
TAATGACTTACTGACAAGAACTTTCTTGGTAGGAGAGCGCGTTACCCTTG
CAGACATTACATTATGTACAAGTCTTGTTATGTTATATGTTCAGGTAAGA
TATGTATCTTGGGTAATCATTTCAAGGTCCAATAGATTGAAAAGCTAAat
tgaatatttgaaaattcaggaaagAATTAGTACCAAGCTTTCTTTTATAT
AATTGCCCTATCCTTCAGCACAATCCTCCATGTCAGGAcaagaaatttta
atatttgtgtgaatggtttttgaagattttgatttattGCTGATTCTATT
TACTTTCTATTACTTCTCTTTTACTGTAGGTTATGGATAGTAAATTTAGA
GAAGCTTTTGGAAATTTAAACAGGTGGTTCACAACTTGTGTAAACCAAcc
taatttcaaaaaagttcttGGCGATATCAAATTGTGTGAAAAAATGGCCA
CATTTGACAATAAAAGATATCAGGAATTACACCCTAAAGGTATGAATTTT
ATCACATTTCTTTGAGGATAGATAAGTAATCATCATAAATATGGTCAAAT
CAAAgatgataaagaaaaaaatactctTTTACCGGAAAGACAGCAAATAA
TTTATTTAGTTTTAAGTTAATTCTCTTTCAACAAGGGTGTAGAGTAAAAT
CTAAAGAAGAAAaggcaatttttaattttgagttgattttgtgaATTTCA
GCATGTTTATATCTTGTTGCAACATACTTATTTGCCTTTTCAGCAGGtgg
aaaaggaaagaaaactgaagaaaaagccaaaaagacaaaggaagcAAAAC
CAAAACCACAAGAGCAGCCAATTGAAGAAGCAGCAAAAGAACCCAAAAAA
GTAGACCACTTCAAAGACTGGAAAAAGAGGTATAATTTATTACACAAACT
TAACCCTATAATCATTACTAGGCTTTGAGAGGCTGTTCAAAACTAGTGAG
ACTTTTCCTGTACTGTTTAAACTTTTGATGTAATTACTCTTCCTGGAATT
CCtagagaattttcacatgaaaaaatggcttagagggacaaatacttctt
ggattggcttgaaacatttttcctttgacttattagtcatTTAACAGGCT
AAAaggtgccataaaagttacattttattcaaagtttgaagttttaaaga
tttcctattttgtcaataatttttcgtgagcataaacttCGCCCTtgcta
aaattttaaaagacatttacgtttgcaaaaaggGCCAAATTTCTGCTCGT
GAAAGTTTTTACGCCTAAATACTTAAAATGCTTTGCAAACGTGGAGAAAT
TTAGTCTGTGGTGCTCATTTTTTACCTTGCTTCGCTCAAAAAGTAATAGC
GAAGCTCCTTAAATTTATAATTCAAACCCTGATTTGAGATGAAAAATTGC
ACTGGAAATTTGTCAATTTGaatgacaccttactgtcaaaATTGTCATCA
TGTTCAAGGAGTGAGAACTTTTAGGTGTCAAAAGTTATTTTATTGtgaag
ctaaataaaatgtAGGGGTTAACAAAATATTAATGTCAAAAGATCTATTA
TGAGTTAATAACAAAAGTTTCACcctctgaatttctgttgttctatctct
ttCGTATTTGacgactatttgttgatcaagaaatcaatAATGTAGCATCG
TTGATGGTAAATTGTATTAGTTTGttgttaatacttacttctcagtgcgt
tttaggcattaatgatatgcccttgataatacacttgtattataaaatca
ttgtaaaggaaaaatcaacactaagaaattcaaacaagcacaaaatggct
gggctgaaagaactcaaaaattaatgaggtgcctcgaaatgccttcacaa
tatttcattGAAATccttttagaaatcaatgaaaaagtacatcaagataa
ttctgtgaaaatttcaagccagcgctttcctgtagaacaataaaagaaaa
tccatcttgtaagaaaaaaaaattaagaaaatgatTTTGCTAAACAGCTC
AAAATGGAAAGTTGTTTGGTTTATTTGAAAggaccatgaacatataaacg
actctACATCTTTTCAACAAAAGCCTCTGTTCTTTTACTCTTATCAGTAG
TGTGTCACATTCAAACGAGGCAGggtatttttcgagttcagaaATTGCAA
ATTGATAGCCTAAAAGATTCGTAGAGATAGCTCATAGAACTAGAAAAAAT
AACGACACTTACTTTTGTCatttatcattggaattgacactttttaataa
agattttgaaactATAAAATATAATGGTTCTTAAGTCACTTCAATCAAGA
ATCAcatttatactcaatgtgatgctggaaatataaatggatacgaattg
acagtagaaaatagcttttGATACTCTCAGCGCACTCTAATATTACATTT
ACAttcaaaatcgtacttttgatgtatgtttatTATTTTCTGGTAGCCGG
TAACTTTTCAACTTCCCAACTGAAACTAGTAACTTCCCAACTCGAAAGTA
GCAACTAGCAACTTGACTAGAATTGTTCCCTAACTCCAGTCAAACTTTGG
CATACTATTTTTCGAGTTGTGAAATAATCATTGGggtgacaaaagtgatt
caaaagtatacaagCAGTTGGAATTCTGCATTTCAGcattgaaaaatgtt
gataaaatatattgcaaatttaggaaaaaattagagaaaaattcttttgt
gaattaAGAGTAATGCTCAAGCTGTTAATCAGCAATCAAGCTGATAAGCT
AAGTAATTCAAGGAAATAAAATTGTGATGGAATATTGctgattttttata
caaaatttcaacaggctgcaacgaagctcgcttcaaagagacaatggAAG
ATAGGCGCCTGGtagtttatatgttcatgagaGGAGTAACTAGTGAACAA
AAATATTGATAGTCTTAATACTTCAGATGAGTTGGGCAGAAAGATTTTCT
ACGTTTTGGGACGGTTGACTATTTAACTTTCTCTAAAAAGTAAGAAAGAA
CAATTTCTTTAGAACCAGGGGGGTACAGAgacagggtactaacccatagg
gtactaacttgattttttactaaaattttgtttagtaccacccacccata
tttagtaccgggtactacttcatttttgctaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATTGTTAGTTTT
TCAGACTGAAAATTGACAGATAATTCAAGCAAACTATCAATGATGGAGTC
Agaagcttttgtcctttgattttcatcacacacttcttgactattttgga
agttttgtcttctaaaaaatctaaaaaatttctcaaaagagtaaaaaaaa
tttgtcgattaaaaaagtttcaaatcaaaaaaattaatatttgaaaaaag
tcaaaatattacaacaaactacttttttattgaaaaacagcaaaattctg
tgaaaaaggACCCAAATAGTATCCTTGAAGAGTACTTGcttgaagagtga
aaaatacacacccccaccccaaagtagtaccgggtactaactttgctatg
ggtcagtaccctatgtctgtaccccccccccctcttagaACAGTTTCTTT
GCACTTGAGTTACAAATTCTTgtaattttcaattcatttctTTTAGTGAT
AAATTCAATATGGATGCCTGGAAAACTGAATACGCTAATGAAGAGTTGTC
TGACTCACTTAAATGGTTTGACGAGCACTGGGACCCTGAAGCATTCGCAG
TTTATCATGCACAATACAGATTTGAAAAAGACTCTGACTATGAGACATAC
AACTTAGAATTCCTTGCAACAAATTTGGTTAGAGGCTTCTATCAACGTAT
CGAGGGACTCCGCAAACACTGTCACATTGTGTTTTTATTTCATGAGAAAA
AGTCACCTAAAGGCGCAAAATACTATGACATGACAGGTTGTATCATTCAA
AAAGCACAACCTCTCTGCTTTTCAGTAAGTTTCCTTTTCATTATGTACTC
CAtctttattatcattattacaaCAAATACAAAGTTCAGGCATGCTGTGG
TCCTCTAGAATTGGTCTTCGTTTATTTATATATAATAAATAGCCTAGTTC
ATGATTTGCCTTTGTCTTGTTTGAATTTTCCTTGAACGTTTTTATTGATG
ATGCTTCTGCCATCTTGAGATCGTTCTGTTGGCTTTGGTCACCGTGTACT
CCGTCATCTGGGAAATTCGTCTGAAGCTTGGTTATATGCTTTCTACATGG
TCAcgttcttttaataaaattttggacctacctggaggtcctataaatta
acccatgccCATgcatttgttcattttttcctactattcctttgtgtttt
tttttcacacaaaaacattgataacaatgcccatcatcaagcatgattca
actttctaaaaatcactGGAACAGCCGAAAATCGCTGAAAAACGGTTCCT
CTTGAATTTTTCGAGctgtacatatttttttctgggaattttgcacactg
atgcaaaatagcAATACCCAAAATGTAACGGAGCCTGACACAGTTTttac
taccgggtgacccacgaaaaagttcggacgtttctcggcgtcttgaggcc
gaacaaatgtcccaaagtgcttggagttttattatttagaaagtagNAAA
ATACACACCCCCACCCCCaaagtagtaccgggtactaactttgctatggg
tcagtaccctgtgtctgtacccccccccctgttagaACAGTTTCTTTGCA
CTTGAGTTACAAATTCTTgtaattttcaattcatttctTTTAGTGATAAA
TTCAATATGGATGCCTGGAAAACTGAATACGCTAATGAAGAGTTGTCTGA
CTCACTTAAATGGTTTGACGAGCACTGGGACCCTGAAGCATTCGCAGTTT
ATCATGCACAATACAGATTTGAAAAAGACTCTGACTATGAGACATACAAC
TTAGAATTCCTTGCAACAAATTTGGTTAGAGGCTTCTATCAACGTATCGA
GGGACTCCGCAAACACTGTCACATTGTGTTTTTATTTCATGAGAAAAAGT
CACCTAAAGGCGCAAAATACTATGACATGACAGGTTGTATCATTCAAAAA
GCACAACCTCTCTGCTTTTCAGTAAGTTTCCCTTTCATTATGTACTCCAt
ctttattatcattattacaaCAAATACAAAGTTCAGGCATGCTGTGGGCC
TCTAGAATTGGTCTTCGTTTATTTATATATAATAAATAGCCTAGTTCATG
ATTTGGCTTTGCCTTGTTTAAATTTTCCTTGAACGTTTTTATTGATGATG
CTTCTGCCATCTTGAGATCGTTCTGTTGGCTTTGTGCACCGTGTACTCCG
TCATCTGGGAAATTCGTCTGAAGCTTGTGTATATGCCTTCTACATGGTCA
CGTTCTTTTAATAAagttttggacctacctggaggtcctataaattaacc
catgccCATGCATTTGTTCAGTTTGTActatttctttgtgtttttttttc
gcacaaaaacattgataacaatgcccatcatcaagcatgattcaactttc
taaaaatcgctggAACAGCCGAAAATCGCCGAAAAACGGTTCCTCTTGAA
TTTTTCGAGctgtacatatttttttctgggaattttgcacactgatgcaa
tatagCAATACCCAAAATGTAACGGAGCCTGACACAGTTTTTactatttt
ctcaattttccaTCATCAGCTTTTTCTAATATGTGTTACAATGTTATGTA
TTCATGCAATTTTAATTATCAGGTAGGGCTCCCTTACATTTTAGGTGTTG
CCATTTTCCAGTCAGCGTTCTGACTTGTTTGGTGTTGTTTCACTATCATA
GATGTTGATATGCTTATATACCTGGACCATGTCacggaaaaaagtttttg
caaCTCAAGGGATGCCAAGCGTCTTGTCTTTCTGCATAACCGTGAGATTG
GTTTTACTAGTTTTGTCGCACGTCTTTGGACACCCTCAATCAGGTTGATA
GATCGACGTAATCTTGGTGGCAATACTGATTGAGCGTACTCTAAATGTTG
TCGTACAAAGGTGGTATACAGTGTCTGGAAAATGTGAGGTCTTGAAATCG
CCTTTGGATCAATCCCAACATGGAATtagctttgtttatttttttttagc
gATGTGTTCTTCAAATGAAAGCTCCGAGTCTATCAAAACACAAATTGACC
TATCGATAAAATGTGACATTTGTCTGGGTAGAATTTCGACAGCCACTCAC
GGGACTACTCTCAAGTGCTTCAATGTCGTATTGTACTGTTAGGGAGTCAA
GAATGGAATTGATTTCCTTCTTAATCTTTGTGTCGTTTGCAACCAAGAAA
ATGTTTGATAGAACATGTTCTGGTAGTTCATTAATATAAATAACAAAGAG
CAGAGGACTGAGCACGCTTCCTTGAGGAATATCACTGGATCTAGAGATGA
TTTTACCCCATTAACACTCGCTAATTGCTTGCGGTTCGATTGAAAAGATT
GGTTGCAATTCAAAGTTGATTCGTTAATCACGTAGCGTTATAGTTTCATC
ATAAGTCTTCGATGGGGTACCGTGTCAAATGCTTTGGCAAAGTCGAAGTA
TATGCAGCCGACCACATCCACTTTTTGCAGTTGATTTGAACACATCTATA
AAGGAGATGAGTTGTTCGACTGTTGACCTTTTTCTGATGAAACTGTATTG
CTTGTTCGATAGAAGTTCTTCGCTGAAAAGGTGTCCCATGATATGTTTTC
GTATTATTGTTTCCGTCAACTTACAGACTACTGAAGTCAGACTTACTGGA
CGATAGTTAAAAGCAAGGTTGTGTGCTCTTTTGTTTTTATGGATCGGTGT
CACAAATGCTAATTCCCAGTCACAAAAAGAGTTAAATTCATTAATAGTGG
TTCTGTAATGTGATCACAAAGTTCAATAAACATCGAGGCAtgaatttatt
gatttattcGCAATGAGCTTCCTGATTTGTTTTGTTATCATTTCCTTTGT
AATGTTTAGTGGTTAAAGTATTTTATCAAAATCAGGTAGATCACCTTCCG
GTTCTTCAGTAAAGGCACTACGGAATAGTTGCTGCAGAATGTTGACCTTT
TCTTGGTCCTCATGCTTTACGGATGTCTTGTCATCGGACGTTTCAAAAAG
AGGAGAACTCCACTTTtgggacctacctggaggtcctataaactAACTTG
TgttcgtctgtccgtccgttcgtctgttaccaacttttctcatgATTGAA
TCATagaaaacatttgatttttggtataaaGGTGCAAAATGCTAGTGGAC
AAAATATGACGGagtctgattttggaaaaaaaatcttttgacttttgaaa
aattggatcattaaatttttttctttcttgtatgaaagaagggtaccatc
ataggttaGAGTTAGCCAATGTTCTAAGCTAAtagtataaattttttttg
acttttataaCGATGTAAACTATTAGCTTAGTTGCAAACAAACTCGGTAA
AAACAAGCTTGCCTTTGCCGAAGACTTATTGTATTCTCAAGAccaattaa
aaattacaaacttttttgcttttgcaCCGCGTTATTTTACCAAAACAATC
AGAAAcgacaaatttttgttttgattgcgaGAGAAAATACTAGAATCTGA
TTGGATGCGATAAAACGAACCGCAGCGAGTGTTGTTTCTCGAAAGAATTT
CTGGTGTCACGATTTAAATCTTACTGCTTACCTAAACTTTCAGATTCATT
TGCTGATtcattcacaatttttttttattttttttagtacGATGAAATAT
GGAATGAATTTTCTCAATCATTCACGTGGACCAAACTTGGAGGAGCTGAT
GTGAACAAATATGTCAAAGCTTATTTTAGTGGAGAACATCCCGATGGTAC
TGACGTAGTGAACTTTGACGAATTCAGATAAATAACACGCGTCACCTTAT
CGTCTCTTTGATTGGTGTTGGTATTTGTCACCTTGGCTCACGTGTTCCGT
TATCTATCGAAATGGACAAATCTAAATTAAATTAACTACCTGAAATATAA
ATGAATTTCTGTTAATAGAACCAAAACgtctgtttctttatttttctgtt
gCCTTAAACATATTTTGATCTTGAGTGAAAGCGGCAGTGTTGGATCATAA
CAAAGCCCTTACACGGGTTTCTTTTATGGGTCCTCGGGTATAACTGTTGG
TCAGCAACACAtgcaatagcgagtttatgtatttgcacttttgaggacgg
taaagtgactgaagcgatttggaaaaacccgcagctCTGACCCGCAAAac
cgaggacggtaaaagtgctgatttaccgtcgtcctcagttaatcaggatc
tagtcaaattagaaccttaccgtctccatcgctgaaaaacacacataaac
tcggtaatatgGGTTCAAACATATCTATATTTTGAGAATCTGATTCTGAC
TAGCTAACCAGGGGGCGATAACTTTTCAATTTCAGAGGGGGTGTTTCGAG
GGTACTTGACAATCGTTTTTGGAACCGATTTGCCTGAGTTAGGGTACTGC
ACTGCATTTCAAGATATCTCATGAGCTACATATCAAAACCTACTAAAACT
TTGTAGAATTTGTAAGATCGCCCGACTTTTTTTAGTGAAAGCACTTGCAT
AGTGGCCAGTGAcccttgaaacacccttgaaaatttccttgaaaCCCTTA
AAAATATTAAGATTTTCTGAAGACCCTTGAGCTATGGAATTTacaccctt
gaaacccttgaattcAGAAATCTGGAAGGGATTTTGTTCATTAAGAACTt
gtaaaatgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041610XLOC_041610Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066501-exon-scaffold_456-1491911889:383181..383403TCONS_00066501-exon-scaffold_456-1491911889:383181..383403Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1510915933:383181..383403TCONS_00066501-exon-scaffold_456-1510915933:383181..383403Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1575043694:383181..383403TCONS_00066501-exon-scaffold_456-1575043694:383181..383403Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1491911889:383499..383645TCONS_00066501-exon-scaffold_456-1491911889:383499..383645Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1510915933:383499..383645TCONS_00066501-exon-scaffold_456-1510915933:383499..383645Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1575043694:383499..383645TCONS_00066501-exon-scaffold_456-1575043694:383499..383645Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1491911889:385674..386024TCONS_00066501-exon-scaffold_456-1491911889:385674..386024Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1510915933:385674..386024TCONS_00066501-exon-scaffold_456-1510915933:385674..386024Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1575043694:385674..386024TCONS_00066501-exon-scaffold_456-1575043694:385674..386024Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1491911889:386260..386419TCONS_00066501-exon-scaffold_456-1491911889:386260..386419Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1510915933:386260..386419TCONS_00066501-exon-scaffold_456-1510915933:386260..386419Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1575043694:386260..386419TCONS_00066501-exon-scaffold_456-1575043694:386260..386419Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1491911889:386674..386809TCONS_00066501-exon-scaffold_456-1491911889:386674..386809Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1510915933:386674..386809TCONS_00066501-exon-scaffold_456-1510915933:386674..386809Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1575043694:386674..386809TCONS_00066501-exon-scaffold_456-1575043694:386674..386809Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1491911889:389727..390054TCONS_00066501-exon-scaffold_456-1491911889:389727..390054Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1510915933:389727..390054TCONS_00066501-exon-scaffold_456-1510915933:389727..390054Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1575043694:389727..390054TCONS_00066501-exon-scaffold_456-1575043694:389727..390054Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1491911889:393868..394889TCONS_00066501-exon-scaffold_456-1491911889:393868..394889Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1510915933:393868..394889TCONS_00066501-exon-scaffold_456-1510915933:393868..394889Clytia hemisphaericaexon
TCONS_00066501-exon-scaffold_456-1575043694:393868..394889TCONS_00066501-exon-scaffold_456-1575043694:393868..394889Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:383181..394889 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.1732	22.6522	21.9974	33.2173	9.39787	10.1268	11.403	8.13363	4.27091	6.39235	5.56271	6.32892	7.02236	8.16791	6.59523	5.14741	7.4509	7.47445	2.24486	1.40945	6.73784	5.07913	14.0434	12.3274	23.5795	26.1034	5.50167	3.70839	13.1258	12.1791
Blast
[Close]
BLAST of TCONS_00066501 vs. Swiss-Prot (Human)
Match: EF1G (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 308.916 bits (790), Expect = 9.440e-96
Identity = 185/433 (42.73%), Postives = 263/433 (60.74%), Query Frame = 2 
Query:  212 MASGTLYTYSGSFRANKILVAAAYSGANVTV----ADFEYGKTNTSADFLKKFPLGRVPAYESN-GLCLSESDAIAQYVSNDALLGGKDSANQASVREYISFAENEIVPSACAWVYPTLGLRQYNKQETDNAMAHLKKCLTKLNNDLLTRTFLVGERVTLADITLCTSLVMLYVQVMDSKFREAFGNLNRWFTTCVNQPNFKKVLGDIKLCEKMATFDNKRYQELHXXXXXXXXXXXXXXXXXXXXXXXXQEQ------PIEEA-------AKEPKKVDHFKDWKKSDKFNMDAWKTEYANEE-LSDSLKWFDEHWDPEAFAVYHAQYRFEKDSDYETYNLEFLATNLVRGFYQRIEGLRKHCHI-VFLFHEKKSPKGAKYYDMTGCIIQKAQPLCFSYDEIWNEFSQSFTWTKL--GGADVNKYVKAYFSGE 1444
            MA+GTLYTY  ++RA K L+AA YSGA V V      F +G+TN + +FL+KFP G+VPA+E + G C+ ES+AIA YVSN+ L G    A  A V +++SFA+++IVP A  WV+PTLG+  +NKQ T+NA   +++ L  L+  L TRTFLVGERVTLADIT+  +L+ LY QV++  FR+AF N NRWF TC+NQP F+ VLG++KLCEKMA FD K++ E  PK     K+   + +K K    + +E+      P EE        A EPK  D F    KS  F +D +K +Y+NE+ LS +L +F EH+D + +++++++YRF      E     F++ NL+ G +QR++ LRK+    V LF    S        ++G  + + Q L F     W    +S+TW KL  G  +    V+ YFS E
Sbjct:    1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEA-AAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKST-FVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFP-----EELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNS------SSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420
The following BLAST results are available for this feature:
BLAST of TCONS_00066501 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EF1G9.440e-9642.73Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G... [more]
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