TCONS_00066500 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066500
Unique Name	TCONS_00066500
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2364

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_456:383181..394889+

transcript sequence

>TCONS_00066500 ID=TCONS_00066500|Name=TCONS_00066500|organism=Clytia hemisphaerica|type=transcript|length=2364bp
aaattgacccaccacggtactaagtgTCATGGGTGtcgtgtactaactgc
ttgccccccctggctttacagatatctgtggtgaAAACTATGTCACCTAA
TCTTCTCGGCTACCGTCAGATTACAAGGTAAAGCAAAACAACAATAATGG
TAGCATTTTAAATTCCATCGAGATATCATCAAGAACCTTTCGTGTCGATA
GATCCATCAAGATGGCGTCTGGTACCCTATATACCTATTCTGGAAGCTTC
AGAGCTAACAAGATTTTGGTCGCTGCTGCATATAGTGGTGCTAATGTCAC
AGTTGCAGATTTTGAATATGGCAAAACCAACACATCTGCAGATTTCCTCA
AGAAATTCCCGCTTGGAAGAGTCCCAGCTTATGAATCCAATGGTTTATGT
TTGAGTGAATCTGATGCCATTGCTCAATATGTCTCAAATGATGCACTACT
TGGTGGAAAGGACAGTGCAAACCAAGCTTCTGTTCGTGAATACATCTCTT
TTGCTGAAAACGAGATTGTTCCTTCTGCTTGTGCTTGGGTTTACCCAACA
CTTGGACTTCGACAATACAACAAACAAGAAACAGACAATGCAATGGCCCA
CTTGAAAAAGTGTCTTACCAAATTGAATAATGACTTACTGACAAGAACTT
TCTTGGTAGGAGAGCGCGTTACCCTTGCAGACATTACATTATGTACAAGT
CTTGTTATGTTATATGTTCAGGTTATGGATAGTAAATTTAGAGAAGCTTT
TGGAAATTTAAACAGGTGGTTCACAACTTGTGTAAACCAAcctaatttca
aaaaagttcttGGCGATATCAAATTGTGTGAAAAAATGGCCACATTTGAC
AATAAAAGATATCAGGAATTACACCCTAAAGGtggaaaaggaaagaaaac
tgaagaaaaagccaaaaagacaaaggaagcAAAACCAAAACCACAAGAGC
AGCCAATTGAAGAAGCAGCAAAAGAACCCAAAAAAGTAGACCACTTCAAA
GACTGGAAAAAGAGTGATAAATTCAATATGGATGCCTGGAAAACTGAATA
CGCTAATGAAGAGTTGTCTGACTCACTTAAATGGTTTGACGAGCACTGGG
ACCCTGAAGCATTCGCAGTTTATCATGCACAATACAGATTTGAAAAAGAC
TCTGACTATGAGACATACAACTTAGAATTCCTTGCAACAAATTTGGTTAG
AGGCTTCTATCAACGTATCGAGGGACTCCGCAAACACTGTCACATTGTGT
TTTTATTTCATGAGAAAAAGTCACCTAAAGGCGCAAAATACTATGACATG
ACAGGTTGTATCATTCAAAAAGCACAACCTCTCTGCTTTTCAtacGATGA
AATATGGAATGAATTTTCTCAATCATTCACGTGGACCAAACTTGGAGGAG
CTGATGTGAACAAATATGTCAAAGCTTATTTTAGTGGAGAACATCCCGAT
GGTACTGACGTAGTGAACTTTGACGAATTCAGATAAATAACACGCGTCAC
CTTATCGTCTCTTTGATTGGTGTTGGTATTTGTCACCTTGGCTCACGTGT
TCCGTTATCTATCGAAATGGACAAATCTAAATTAAATTAACTACCTGAAA
TATAAATGAATTTCTGTTAATAGAACCAAAACgtctgtttctttattttt
ctgttgCCTTAAACATATTTTGATCTTGAGTGAAAGCGGCAGTGTTGGAT
CATAACAAAGCCCTTACACGGGTTTCTTTTATGGGTCCTCGGGTATAACT
GTTGGTCAGCAACACAtgcaatagcgagtttatgtatttgcacttttgag
gacggtaaagtgactgaagcgatttggaaaaacccgcagctCTGACCCGC
AAAaccgaggacggtaaaagtgctgatttaccgtcgtcctcagttaatca
ggatctagtcaaattagaaccttaccgtctccatcgctgaaaaacacaca
taaactcggtaatatgGGTTCAAACATATCTATATTTTGAGAATCTGATT
CTGACTAGCTAACCAGGGGGCGATAACTTTTCAATTTCAGAGGGGGTGTT
TCGAGGGTACTTGACAATCGTTTTTGGAACCGATTTGCCTGAGTTAGGGT
ACTGCACTGCATTTCAAGATATCTCATGAGCTACATATCAAAACCTACTA
AAACTTTGTAGAATTTGTAAGATCGCCCGACTTTTTTTAGTGAAAGCACT
TGCATAGTGGCCAGTGAcccttgaaacacccttgaaaatttccttgaaaC
CCTTAAAAATATTAAGATTTTCTGAAGACCCTTGAGCTATGGAATTTaca
cccttgaaacccttgaattcAGAAATCTGGAAGGGATTTTGTTCATTAAG
AACTtgtaaaatgc

Run BLAST on NCBI

transcript from alignment at scaffold_456:383181..394889+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066500 ID=TCONS_00066500|Name=TCONS_00066500|organism=Clytia hemisphaerica|type=transcript|length=11709bp|location=Sequence derived from alignment at scaffold_456:383181..394889+ (Clytia hemisphaerica)
aaattgacccaccacggtactaagtgTCATGGGTGtcgtgtactaactgc
ttgccccccctggctttacagatatctgtggtgaAAACTATGTCACCTAA
TCTTCTCGGCTACCGTCAGATTACAAGGTAAAGCAAAACAACAATAATGG
TAGCATTTTAAATTCCATCGAGATATCATCAAGAACCTTTCGTGTCGATA
GATCCATCAAGATGGCGTCTGGTGTAAGTAATGAATCTTCTTATATCCTC
GTGATCTCTAGTTTAACAGGTCTAATTAAACGTTTGAAATATTCAAGGAT
GTCCATTTTTTCTCATAGACCCTATATACCTATTCTGGAAGCTTCAGAGC
TAACAAGATTTTGGTCGCTGCTGCATATAGTGGTGCTAATGTCACAGTTG
CAGATTTTGAATATGGCAAAACCAACACATCTGCAGATTTCCTCAAGAAA
TTCCCGCTTGGAAGAGTGAGTTGATATTGTTTTCTCGGTTTTTCCCGGTT
CTTGAGTGTTTGGTGGGGATCTTGCAGATAACTTAGTCTAAACTTTGCAG
ATTAACCTATATAGGGGAGCCATTcacccagacggtgtcaatcaaacgcc
gaatcaattgaacgcaattgaataattgcaattcgattgtcgaacgcaat
cgaatcgcaatcgaatattacccaggatttgctgttcgattacttcgatt
acgttcgattgtattcgactacgctcgattgattcaattatattatattt
tattcGCTTTGTGGTACGGTACTAAAACATTCGGCAGCCCGCTAAAAAGC
CCTAAAACGAAGTGATCCAATTTCATTTAATTaaactcatcaaacataat
cCTAATTGAACGAAATCGTCGAATGCAAATGACAATCGAACATAgttcaa
ctatcaatcgaaccaatcaaacctttcaaacgcaatcgaacacaatcgaa
tattacccaggaatcagccgttcgattgagattcgattacgtttgacaat
cgaatcgcaattattcaatCGCGTTtgaataaggaactcgataaggaact
ttgaggctgaaattctctgtaaaaataaggaactccaggctcagagaaAG
GTTAAGGttcctttttaaataaaaacgtgtaaaggAAAACTTGAAGCGAA
TGGTGATTTAGAAAAGGGCTTGGCTAACGTAAAAATTTCCGACATTATGT
TTTGAAGGTGAATTGATCGGGCAACGCAAACAGAACATATTATTGATGGT
CGCCATAAATTTCTGGAATTATCTCGGCTCtataatatatattattatta
tattttacTTTGATGGATCTGGATTAATCTTATACTTCCATTTCTTTAAA
AGCCTGATAGCCTTTTTGTGGATATTTATTCTAGATATTTGTGATTTGTC
TTGTCCTTTTGTTTGGTGGGTTATGTTATCTGTGTTTCAATTTGAAGAGT
TGATGGTTTCATACGTCTAGACTATTACAGCGTCAGATAATAAAATCAGA
GCCGTCTGCAAAAAACTTGTGCCTGTGTGGGCAGTCAAGCAAAGAGAACT
TCAGACAAAACAANGATAATAAAATCAGAGCTGTCTGCCAAAGACTTGTG
CCTGTGTGGGCAGTCAAGCAAAGAgaacttcagaaaaaaaaaacggaaGG
TTTATTTTGGTTTTGGCCATTCCAGAACATTTTTGTTACCCTCGTCAGAC
AACATACATTTCATAGAAATCCAGCAACCTAATCAGATTTTATGGTAGTT
TGTTTTTGACGGGTCAGATCTGACCCATCACGGATCCAAAGggttaaata
agcaaaaattatCTTTCTATCAAGCAAAGTGgcaaatttatttcaattta
agAATCTTATCTTAGTCTAGGAATAGGTTTTTGAGTATCAATACCTGTCA
ATATACacatttcaaattaaattttcccGTAGCTTttgctttgatcccat
gtaattTGCAAGAAAAATTAAGTAAACAAAACCATTCTTCCATTTTGGCA
TACTCCATGGGTCACTataacaaaacatgaaaatgatCGACAATTAAATA
atcttatttcttttattgaatttataaataaaaaaacatttatctgtCAA
CATTTTATAAGGCATTCAAGGCTTgtgtttacttgattttttttcactgt
GTATTGATCATCGTTCAACTTGTATTGAATTGTATAGAATGGGAGAGTGT
GGCTTAGTGACATAAGGGTCAACCCTCCTCCTGACGGGCAAATGCtgtga
aaaaatatgaaatcataTCAAAGGTCCCTTACACATACACAAAGTAACCC
TGATTGATAGTTTTTGTCCATACCTGTTTGAGACAGCTTTTTAACATGAA
CTTAAATGTATTTCAAACTGCTACCTTGAAGATAAAGCCTACCACTCGTA
TGGCACAGCAGATAAGGTgaagcaaacaaatatttgatTTCAGCCTTACT
GCggtaaatttggagattttgaaattcaatgcaTACTTTTTAGGTCCCAG
CTTATGAATCCAATGGTTTATGTTTGAGTGAATCTGATGCCATTGCTCAA
TATGTCTCAAATGATGCACTACTTGGTGGAAAGGACAGTGCAAACCAAGC
TTCTGTTCGTGAATACATCTCTTTTGCTGAAAACGAGATTGTTCCTTCTG
CTTGTGCTTGGGTTTACCCAACACTTGGACTTCGACAATACAACAAACAA
GAAACAGACAATGCAATGGCCCACTTGAAAAAGTGTCTTACCAAATTGAA
TAATGACTTACTGACAAGAACTTTCTTGGTAGGAGAGCGCGTTACCCTTG
CAGACATTACATTATGTACAAGTCTTGTTATGTTATATGTTCAGGTAAGA
TATGTATCTTGGGTAATCATTTCAAGGTCCAATAGATTGAAAAGCTAAat
tgaatatttgaaaattcaggaaagAATTAGTACCAAGCTTTCTTTTATAT
AATTGCCCTATCCTTCAGCACAATCCTCCATGTCAGGAcaagaaatttta
atatttgtgtgaatggtttttgaagattttgatttattGCTGATTCTATT
TACTTTCTATTACTTCTCTTTTACTGTAGGTTATGGATAGTAAATTTAGA
GAAGCTTTTGGAAATTTAAACAGGTGGTTCACAACTTGTGTAAACCAAcc
taatttcaaaaaagttcttGGCGATATCAAATTGTGTGAAAAAATGGCCA
CATTTGACAATAAAAGATATCAGGAATTACACCCTAAAGGTATGAATTTT
ATCACATTTCTTTGAGGATAGATAAGTAATCATCATAAATATGGTCAAAT
CAAAgatgataaagaaaaaaatactctTTTACCGGAAAGACAGCAAATAA
TTTATTTAGTTTTAAGTTAATTCTCTTTCAACAAGGGTGTAGAGTAAAAT
CTAAAGAAGAAAaggcaatttttaattttgagttgattttgtgaATTTCA
GCATGTTTATATCTTGTTGCAACATACTTATTTGCCTTTTCAGCAGGtgg
aaaaggaaagaaaactgaagaaaaagccaaaaagacaaaggaagcAAAAC
CAAAACCACAAGAGCAGCCAATTGAAGAAGCAGCAAAAGAACCCAAAAAA
GTAGACCACTTCAAAGACTGGAAAAAGAGGTATAATTTATTACACAAACT
TAACCCTATAATCATTACTAGGCTTTGAGAGGCTGTTCAAAACTAGTGAG
ACTTTTCCTGTACTGTTTAAACTTTTGATGTAATTACTCTTCCTGGAATT
CCtagagaattttcacatgaaaaaatggcttagagggacaaatacttctt
ggattggcttgaaacatttttcctttgacttattagtcatTTAACAGGCT
AAAaggtgccataaaagttacattttattcaaagtttgaagttttaaaga
tttcctattttgtcaataatttttcgtgagcataaacttCGCCCTtgcta
aaattttaaaagacatttacgtttgcaaaaaggGCCAAATTTCTGCTCGT
GAAAGTTTTTACGCCTAAATACTTAAAATGCTTTGCAAACGTGGAGAAAT
TTAGTCTGTGGTGCTCATTTTTTACCTTGCTTCGCTCAAAAAGTAATAGC
GAAGCTCCTTAAATTTATAATTCAAACCCTGATTTGAGATGAAAAATTGC
ACTGGAAATTTGTCAATTTGaatgacaccttactgtcaaaATTGTCATCA
TGTTCAAGGAGTGAGAACTTTTAGGTGTCAAAAGTTATTTTATTGtgaag
ctaaataaaatgtAGGGGTTAACAAAATATTAATGTCAAAAGATCTATTA
TGAGTTAATAACAAAAGTTTCACcctctgaatttctgttgttctatctct
ttCGTATTTGacgactatttgttgatcaagaaatcaatAATGTAGCATCG
TTGATGGTAAATTGTATTAGTTTGttgttaatacttacttctcagtgcgt
tttaggcattaatgatatgcccttgataatacacttgtattataaaatca
ttgtaaaggaaaaatcaacactaagaaattcaaacaagcacaaaatggct
gggctgaaagaactcaaaaattaatgaggtgcctcgaaatgccttcacaa
tatttcattGAAATccttttagaaatcaatgaaaaagtacatcaagataa
ttctgtgaaaatttcaagccagcgctttcctgtagaacaataaaagaaaa
tccatcttgtaagaaaaaaaaattaagaaaatgatTTTGCTAAACAGCTC
AAAATGGAAAGTTGTTTGGTTTATTTGAAAggaccatgaacatataaacg
actctACATCTTTTCAACAAAAGCCTCTGTTCTTTTACTCTTATCAGTAG
TGTGTCACATTCAAACGAGGCAGggtatttttcgagttcagaaATTGCAA
ATTGATAGCCTAAAAGATTCGTAGAGATAGCTCATAGAACTAGAAAAAAT
AACGACACTTACTTTTGTCatttatcattggaattgacactttttaataa
agattttgaaactATAAAATATAATGGTTCTTAAGTCACTTCAATCAAGA
ATCAcatttatactcaatgtgatgctggaaatataaatggatacgaattg
acagtagaaaatagcttttGATACTCTCAGCGCACTCTAATATTACATTT
ACAttcaaaatcgtacttttgatgtatgtttatTATTTTCTGGTAGCCGG
TAACTTTTCAACTTCCCAACTGAAACTAGTAACTTCCCAACTCGAAAGTA
GCAACTAGCAACTTGACTAGAATTGTTCCCTAACTCCAGTCAAACTTTGG
CATACTATTTTTCGAGTTGTGAAATAATCATTGGggtgacaaaagtgatt
caaaagtatacaagCAGTTGGAATTCTGCATTTCAGcattgaaaaatgtt
gataaaatatattgcaaatttaggaaaaaattagagaaaaattcttttgt
gaattaAGAGTAATGCTCAAGCTGTTAATCAGCAATCAAGCTGATAAGCT
AAGTAATTCAAGGAAATAAAATTGTGATGGAATATTGctgattttttata
caaaatttcaacaggctgcaacgaagctcgcttcaaagagacaatggAAG
ATAGGCGCCTGGtagtttatatgttcatgagaGGAGTAACTAGTGAACAA
AAATATTGATAGTCTTAATACTTCAGATGAGTTGGGCAGAAAGATTTTCT
ACGTTTTGGGACGGTTGACTATTTAACTTTCTCTAAAAAGTAAGAAAGAA
CAATTTCTTTAGAACCAGGGGGGTACAGAgacagggtactaacccatagg
gtactaacttgattttttactaaaattttgtttagtaccacccacccata
tttagtaccgggtactacttcatttttgctaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATTGTTAGTTTT
TCAGACTGAAAATTGACAGATAATTCAAGCAAACTATCAATGATGGAGTC
Agaagcttttgtcctttgattttcatcacacacttcttgactattttgga
agttttgtcttctaaaaaatctaaaaaatttctcaaaagagtaaaaaaaa
tttgtcgattaaaaaagtttcaaatcaaaaaaattaatatttgaaaaaag
tcaaaatattacaacaaactacttttttattgaaaaacagcaaaattctg
tgaaaaaggACCCAAATAGTATCCTTGAAGAGTACTTGcttgaagagtga
aaaatacacacccccaccccaaagtagtaccgggtactaactttgctatg
ggtcagtaccctatgtctgtaccccccccccctcttagaACAGTTTCTTT
GCACTTGAGTTACAAATTCTTgtaattttcaattcatttctTTTAGTGAT
AAATTCAATATGGATGCCTGGAAAACTGAATACGCTAATGAAGAGTTGTC
TGACTCACTTAAATGGTTTGACGAGCACTGGGACCCTGAAGCATTCGCAG
TTTATCATGCACAATACAGATTTGAAAAAGACTCTGACTATGAGACATAC
AACTTAGAATTCCTTGCAACAAATTTGGTTAGAGGCTTCTATCAACGTAT
CGAGGGACTCCGCAAACACTGTCACATTGTGTTTTTATTTCATGAGAAAA
AGTCACCTAAAGGCGCAAAATACTATGACATGACAGGTTGTATCATTCAA
AAAGCACAACCTCTCTGCTTTTCAGTAAGTTTCCTTTTCATTATGTACTC
CAtctttattatcattattacaaCAAATACAAAGTTCAGGCATGCTGTGG
TCCTCTAGAATTGGTCTTCGTTTATTTATATATAATAAATAGCCTAGTTC
ATGATTTGCCTTTGTCTTGTTTGAATTTTCCTTGAACGTTTTTATTGATG
ATGCTTCTGCCATCTTGAGATCGTTCTGTTGGCTTTGGTCACCGTGTACT
CCGTCATCTGGGAAATTCGTCTGAAGCTTGGTTATATGCTTTCTACATGG
TCAcgttcttttaataaaattttggacctacctggaggtcctataaatta
acccatgccCATgcatttgttcattttttcctactattcctttgtgtttt
tttttcacacaaaaacattgataacaatgcccatcatcaagcatgattca
actttctaaaaatcactGGAACAGCCGAAAATCGCTGAAAAACGGTTCCT
CTTGAATTTTTCGAGctgtacatatttttttctgggaattttgcacactg
atgcaaaatagcAATACCCAAAATGTAACGGAGCCTGACACAGTTTttac
taccgggtgacccacgaaaaagttcggacgtttctcggcgtcttgaggcc
gaacaaatgtcccaaagtgcttggagttttattatttagaaagtagNAAA
ATACACACCCCCACCCCCaaagtagtaccgggtactaactttgctatggg
tcagtaccctgtgtctgtacccccccccctgttagaACAGTTTCTTTGCA
CTTGAGTTACAAATTCTTgtaattttcaattcatttctTTTAGTGATAAA
TTCAATATGGATGCCTGGAAAACTGAATACGCTAATGAAGAGTTGTCTGA
CTCACTTAAATGGTTTGACGAGCACTGGGACCCTGAAGCATTCGCAGTTT
ATCATGCACAATACAGATTTGAAAAAGACTCTGACTATGAGACATACAAC
TTAGAATTCCTTGCAACAAATTTGGTTAGAGGCTTCTATCAACGTATCGA
GGGACTCCGCAAACACTGTCACATTGTGTTTTTATTTCATGAGAAAAAGT
CACCTAAAGGCGCAAAATACTATGACATGACAGGTTGTATCATTCAAAAA
GCACAACCTCTCTGCTTTTCAGTAAGTTTCCCTTTCATTATGTACTCCAt
ctttattatcattattacaaCAAATACAAAGTTCAGGCATGCTGTGGGCC
TCTAGAATTGGTCTTCGTTTATTTATATATAATAAATAGCCTAGTTCATG
ATTTGGCTTTGCCTTGTTTAAATTTTCCTTGAACGTTTTTATTGATGATG
CTTCTGCCATCTTGAGATCGTTCTGTTGGCTTTGTGCACCGTGTACTCCG
TCATCTGGGAAATTCGTCTGAAGCTTGTGTATATGCCTTCTACATGGTCA
CGTTCTTTTAATAAagttttggacctacctggaggtcctataaattaacc
catgccCATGCATTTGTTCAGTTTGTActatttctttgtgtttttttttc
gcacaaaaacattgataacaatgcccatcatcaagcatgattcaactttc
taaaaatcgctggAACAGCCGAAAATCGCCGAAAAACGGTTCCTCTTGAA
TTTTTCGAGctgtacatatttttttctgggaattttgcacactgatgcaa
tatagCAATACCCAAAATGTAACGGAGCCTGACACAGTTTTTactatttt
ctcaattttccaTCATCAGCTTTTTCTAATATGTGTTACAATGTTATGTA
TTCATGCAATTTTAATTATCAGGTAGGGCTCCCTTACATTTTAGGTGTTG
CCATTTTCCAGTCAGCGTTCTGACTTGTTTGGTGTTGTTTCACTATCATA
GATGTTGATATGCTTATATACCTGGACCATGTCacggaaaaaagtttttg
caaCTCAAGGGATGCCAAGCGTCTTGTCTTTCTGCATAACCGTGAGATTG
GTTTTACTAGTTTTGTCGCACGTCTTTGGACACCCTCAATCAGGTTGATA
GATCGACGTAATCTTGGTGGCAATACTGATTGAGCGTACTCTAAATGTTG
TCGTACAAAGGTGGTATACAGTGTCTGGAAAATGTGAGGTCTTGAAATCG
CCTTTGGATCAATCCCAACATGGAATtagctttgtttatttttttttagc
gATGTGTTCTTCAAATGAAAGCTCCGAGTCTATCAAAACACAAATTGACC
TATCGATAAAATGTGACATTTGTCTGGGTAGAATTTCGACAGCCACTCAC
GGGACTACTCTCAAGTGCTTCAATGTCGTATTGTACTGTTAGGGAGTCAA
GAATGGAATTGATTTCCTTCTTAATCTTTGTGTCGTTTGCAACCAAGAAA
ATGTTTGATAGAACATGTTCTGGTAGTTCATTAATATAAATAACAAAGAG
CAGAGGACTGAGCACGCTTCCTTGAGGAATATCACTGGATCTAGAGATGA
TTTTACCCCATTAACACTCGCTAATTGCTTGCGGTTCGATTGAAAAGATT
GGTTGCAATTCAAAGTTGATTCGTTAATCACGTAGCGTTATAGTTTCATC
ATAAGTCTTCGATGGGGTACCGTGTCAAATGCTTTGGCAAAGTCGAAGTA
TATGCAGCCGACCACATCCACTTTTTGCAGTTGATTTGAACACATCTATA
AAGGAGATGAGTTGTTCGACTGTTGACCTTTTTCTGATGAAACTGTATTG
CTTGTTCGATAGAAGTTCTTCGCTGAAAAGGTGTCCCATGATATGTTTTC
GTATTATTGTTTCCGTCAACTTACAGACTACTGAAGTCAGACTTACTGGA
CGATAGTTAAAAGCAAGGTTGTGTGCTCTTTTGTTTTTATGGATCGGTGT
CACAAATGCTAATTCCCAGTCACAAAAAGAGTTAAATTCATTAATAGTGG
TTCTGTAATGTGATCACAAAGTTCAATAAACATCGAGGCAtgaatttatt
gatttattcGCAATGAGCTTCCTGATTTGTTTTGTTATCATTTCCTTTGT
AATGTTTAGTGGTTAAAGTATTTTATCAAAATCAGGTAGATCACCTTCCG
GTTCTTCAGTAAAGGCACTACGGAATAGTTGCTGCAGAATGTTGACCTTT
TCTTGGTCCTCATGCTTTACGGATGTCTTGTCATCGGACGTTTCAAAAAG
AGGAGAACTCCACTTTtgggacctacctggaggtcctataaactAACTTG
TgttcgtctgtccgtccgttcgtctgttaccaacttttctcatgATTGAA
TCATagaaaacatttgatttttggtataaaGGTGCAAAATGCTAGTGGAC
AAAATATGACGGagtctgattttggaaaaaaaatcttttgacttttgaaa
aattggatcattaaatttttttctttcttgtatgaaagaagggtaccatc
ataggttaGAGTTAGCCAATGTTCTAAGCTAAtagtataaattttttttg
acttttataaCGATGTAAACTATTAGCTTAGTTGCAAACAAACTCGGTAA
AAACAAGCTTGCCTTTGCCGAAGACTTATTGTATTCTCAAGAccaattaa
aaattacaaacttttttgcttttgcaCCGCGTTATTTTACCAAAACAATC
AGAAAcgacaaatttttgttttgattgcgaGAGAAAATACTAGAATCTGA
TTGGATGCGATAAAACGAACCGCAGCGAGTGTTGTTTCTCGAAAGAATTT
CTGGTGTCACGATTTAAATCTTACTGCTTACCTAAACTTTCAGATTCATT
TGCTGATtcattcacaatttttttttattttttttagtacGATGAAATAT
GGAATGAATTTTCTCAATCATTCACGTGGACCAAACTTGGAGGAGCTGAT
GTGAACAAATATGTCAAAGCTTATTTTAGTGGAGAACATCCCGATGGTAC
TGACGTAGTGAACTTTGACGAATTCAGATAAATAACACGCGTCACCTTAT
CGTCTCTTTGATTGGTGTTGGTATTTGTCACCTTGGCTCACGTGTTCCGT
TATCTATCGAAATGGACAAATCTAAATTAAATTAACTACCTGAAATATAA
ATGAATTTCTGTTAATAGAACCAAAACgtctgtttctttatttttctgtt
gCCTTAAACATATTTTGATCTTGAGTGAAAGCGGCAGTGTTGGATCATAA
CAAAGCCCTTACACGGGTTTCTTTTATGGGTCCTCGGGTATAACTGTTGG
TCAGCAACACAtgcaatagcgagtttatgtatttgcacttttgaggacgg
taaagtgactgaagcgatttggaaaaacccgcagctCTGACCCGCAAAac
cgaggacggtaaaagtgctgatttaccgtcgtcctcagttaatcaggatc
tagtcaaattagaaccttaccgtctccatcgctgaaaaacacacataaac
tcggtaatatgGGTTCAAACATATCTATATTTTGAGAATCTGATTCTGAC
TAGCTAACCAGGGGGCGATAACTTTTCAATTTCAGAGGGGGTGTTTCGAG
GGTACTTGACAATCGTTTTTGGAACCGATTTGCCTGAGTTAGGGTACTGC
ACTGCATTTCAAGATATCTCATGAGCTACATATCAAAACCTACTAAAACT
TTGTAGAATTTGTAAGATCGCCCGACTTTTTTTAGTGAAAGCACTTGCAT
AGTGGCCAGTGAcccttgaaacacccttgaaaatttccttgaaaCCCTTA
AAAATATTAAGATTTTCTGAAGACCCTTGAGCTATGGAATTTacaccctt
gaaacccttgaattcAGAAATCTGGAAGGGATTTTGTTCATTAAGAACTt
gtaaaatgc

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041610	XLOC_041610	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_456	supercontig	scaffold_456:383181..394889 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.70646e-08	2.17262e-07	1.19197e-08	7.60688e-06	2.04433e-06	2.52555e-05	1.03824e-07	1.01536e-07	0	1.8508e-10	0	1.85174e-10	0	0	0	0	4.90599e-10	0	0	0	0	0	7.48256e-09	8.35788e-10	0.000686622	3.65177e-05	3.67104e-10	0	4.79876e-10	1.5559e-08

Blast

[Close]

BLAST of TCONS_00066500 vs. Swiss-Prot (Human)
Match: EF1G (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 301.212 bits (770), Expect = 6.039e-93
Identity = 181/433 (41.80%), Postives = 263/433 (60.74%), Query Frame = 2

Query:  212 MASGTLYTYSGSFRANKILVAAAYSGANVTV----ADFEYGKTNTSADFLKKFPLGRVPAYESN-GLCLSESDAIAQYVSNDALLGGKDSANQASVREYISFAENEIVPSACAWVYPTLGLRQYNKQETDNAMAHLKKCLTKLNNDLLTRTFLVGERVTLADITLCTSLVMLYVQVMDSKFREAFGNLNRWFTTCVNQPNFKKVLGDIKLCEKMATFDNKRYQELHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XKEPKKVDHFKDWKKSDKFNMDAWKTEYANEE-LSDSLKWFDEHWDPEAFAVYHAQYRFEKDSDYETYNLEFLATNLVRGFYQRIEGLRKHCHI-VFLFHEKKSPKGAKYYDMTGCIIQKAQPLCFSYDEIWNEFSQSFTWTKL--GGADVNKYVKAYFSGE 1441
            MA+GTLYTY  ++RA K L+AA YSGA V V      F +G+TN + +FL+KFP G+VPA+E + G C+ ES+AIA YVSN+ L G    A  A V +++SFA+++IVP A  WV+PTLG+  +NKQ T+NA   +++ L  L+  L TRTFLVGERVTLADIT+  +L+ LY QV++  FR+AF N NRWF TC+NQP F+ VLG++KLCEKMA FD K++ E  PK    +K +   ++ ++ + + +E+    A              A EPK  D F    KS  F +D +K +Y+NE+ LS +L +F EH+D + +++++++YRF      E     F++ NL+ G +QR++ LRK+    V LF    S        ++G  + + Q L F     W    +S+TW KL  G  +    V+ YFS E
Sbjct:    1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEA-AAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKST-FVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFP-----EELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNS------SSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420

The following BLAST results are available for this feature:

BLAST of TCONS_00066500 vs. Swiss-Prot (Human)

BLAST of TCONS_00066500 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EF1G	6.039e-93	41.80	Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G...	[more]

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TCONS_00066500 (transcript) - C. hemisphaerica