TCONS_00066456 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066456
Unique NameTCONS_00066456
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1814

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066456 ID=TCONS_00066456|Name=TCONS_00066456|organism=Clytia hemisphaerica|type=transcript|length=1814bp
GGAAGAAATAACACTGTAACCGGAAcattttttacataattcaTAGTGCA
GCCAAAAAATATTGTATACTGCCATGGCATAAATCATTAAATCAATATCC
AATGAAATCTGATTTTGAATAAATGGTGGCGCTCCAAAGTATTTTAGAAT
GCCACGCAATAAACTGTTCAAATGATGTCCAATGAGTTCTAAAGACAATG
TTTTGTTTCTATCTTAGCGGTTATGACTTTGgatatttgttaaaattgtt
gATGAATCAAGCTTTACCACCAGAAGAATCGGATTTTTTCGATTTGCTGA
GATTATATTTCCCCAAAATTTACGATGTCAAATATTTGATGAAAAGCTGC
AAAAGTTTGAAGGGTGGTTTACAAGAGGTTTCAGAAATTCTTGAGCTTGA
ACGGGTTGGACCTCAGCATCAAGCAGGGAGTGACAGTTTGTTGACAGGAG
CTGCTTTCTTCAAAATGAGAGAGatgtttTTCGAAGACAACATCGACGAT
GATAAATATTGTGGACATTTATTCGGACTTGGCGCCTCATACTCTAATGG
CGTATCAGCAGTGGCGTTCAAAATCGGACAGGGCGTGGAAGGAACCACAT
AAAGGGGCGTACATGGCTGTTGTTTGAAGGATGAAAGGCTTTACAAGATC
CATTTAGATTGTGACAATGAACTACAACTAAAGATGCGCAGGTTTTGTTA
CAGATTTTGCGTTGATTTAACATCGATGGGAGGAAACtaaatgataaata
aaaacGCCAAAATGTCTCTAAAGGGCGTCTTAATGAATGAATGCTTCTTG
AGACAAAAGGACTAATTGAAATTACactgtaaatatattttttacccGAT
GAGTTTAAAAAATGGTGAGCAAAGAAAAGTTGTTCAAATTATTTTGGAAA
TGATGACTGGCTTCGTTTATTTTGCTTGAAATCAGTACGTCACTTATAGT
GTGGTTATTTCATGGGCCAAGGTTAAGTTTATGCAacaacttttttcaca
aaatatgTATGTTTAAAGATTAGAGattgaatttttgtttgatttctgat
gtttttttgaaaattcaatctTGATGCGATGGATGAGATATCTACtaaag
taaacacaaagaaagaaaaatagtttcagtttttctttgctttttatttc
ttttcgaCCTTTTGCTTACATACATATCAAACCATACATGATGCTTGATA
TCTATTCTCACTTGTCATTCTATTGATGGTTACTTTGAGAAGTTATGGTT
TTACAAAAGCAAGATTTCAAAATGGAGGAAGAAGTCGTAGATACATCAAA
AAACACTGACAAGGTTCCTTCACCCTCTTCATCAATCAAATCACCACGGA
TGAGATATGGCTGCTACTCTGAAAACCTCAGCAAGCTTATTTTATTGCAT
GATCACGGTATCGGAAGCCCTTGTCTTTACTGCCAACATTGTAGTGGATT
GGAATTACATTTCTGGAGAAAAACATGCAAGAATTGTGGATGTCGAGCAG
AAGATCATGAAGTACAAATCAATGAAAGTATCCATGATTCGTTAGTCGAT
TCTCTCCTACACATGAATGAGGACGACCTTTCAGCTTttatcgaaatcga
aagtgaaaatgaagatCTACAATCTCATCCAATATTGAAAGAGTTTGTTG
GAAAGAGCAGTCAAGTTAAAGAACGAAAGACTTCCCGCTTATTACCACCA
CCGGTTGCTAAGAAACCATCCGGAGAGAACCAATCTACTAGCAGTATGAC
GGAGCATAAAGAAACACCTGATGAACGACAAGAGGCCACTGAGGATTGCC
AGTACCGAGAGAAg
Run BLAST on NCBI

protein sequence of TCONS_00066456-protein

>TCONS_00066456-protein ID=TCONS_00066456-protein|Name=TCONS_00066456-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MVLQKQDFKMEEEVVDTSKNTDKVPSPSSSIKSPRMRYGCYSENLSKLIL
LHDHGIGSPCLYCQHCSGLELHFWRKTCKNCGCRAEDHEVQINESIHDSL
VDSLLHMNEDDLSAFIEIESENEDLQSHPILKEFVGKSSQVKERKTSRLL
PPPVAKKPSGENQSTSSMTEHKETPDERQEATEDCQYREK
Run BLAST on NCBI

transcript from alignment at scaffold_455:324664..333373-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066456 ID=TCONS_00066456|Name=TCONS_00066456|organism=Clytia hemisphaerica|type=transcript|length=8710bp|location=Sequence derived from alignment at scaffold_455:324664..333373- (Clytia hemisphaerica)
GGAAGAAATAACACTGTAACCGGAACATTTTTTACATAATTCATAGTGCA
GCCAAAAAATATTGTATACTGCCATGGCATAAATCATTAAATCAATATCC
AATGAAATCTGATTTTGAATAAATGGTGGCGCTCCAAAGTATTTTAGAAT
GCCACGCAATAAACTGTTCAAATGATGTCCAATGAGTTCTAAAGACAATG
TTTTGTTTCTATCTTAGCGGTTATGACTTTGGATATTTGTTAAAATTGTT
GATGAATCAAGCTTTACCACCAGAAGAATCGGATTTTTTCGATTTGCTGA
GATTATATTTCCCCAAAATTTACGATGTCAAATATTTGATGAAAAGCTGC
AAAAGTTTGAAGGGTGGTTTACAAGAGGTTTCAGAAATTCTTGAGGTAGG
TTTGGGTATCTTTTATCCGTATGGAAATCTTTAAATACAAGAAGAATCCA
AGTTTCTAAAAATCTTGATATATAGGTGAACTGAAAGGTCAAAAGATATT
ACGTTTAGTGTAAATATTATACAGGTTTTTTTTTAACATTTCAGGTCAAT
AACCTATGATCTCCGCAATGTTATTATAGCTTCACACATTATGACCTCTT
TATTTGTGTTTTCTTTCCAGCTTGAACGGGTTGGACCTCAGCATCAAGCA
GGGAGTGACAGTTTGTTGACAGGAGCTGCTTTCTTCAAAATGAGAGAGGT
AGAATTTTTGCTGATGTTATCAAGCACTTCAATAATAAGCAAAATAGAAG
GGAGAAGGGGAAATCTTAAAAAAAAAAGAATTTGTCTGTACTCAAAAGGT
TTACGGCAACGAGAAATTATTACTCAATTTTTATGCACGACATAAAAAAT
ATTTTGAAATATTTTGCAGGAATTACGTCGCTTAAAGACAAAACCTTTTT
GTTCTTTTTCACTTAATAACCTTCTGCCATAAATAAACATCACTACTTTT
ACTACCATAAATACTACATAAATTGATGAAAATCATCCCAAACTTGTTTA
TATTATTATAAAGTTCACAATATTTTCATTGTATCGCGCATATTTTTGAG
TTCGAGTCCGACAACTGACTGGATACTTTTAGGAAATCATTTTTCTGGAA
GAAGGACGATTTTCCTTCGCCGTCTTGTAAGAGTTTAATCAATAACAGAA
ACTCGTAAAAATCAATAGTCCCTGATTCATCGATATCGATCTCTCGAACT
GCATCTGCTACCTCTTCCGTTGTCGACAAATACCCCAAGATTCCTGGTAG
ATTGTGTAGAATCTCTGTGGTGTCCAGGCTGAAATCACCGTTGTCATCCC
ACATGGAAAACAGGCTAAAATAATGCGTGATTTTCTCTTGTGAGATTGTA
GGGAAATAATTGGACACTTCTTTAATTTTCAATTTTCCTTTCTCGTCTAT
GAAGGTTGGGTGCTCTTTTTGGATGTCTCTTAGCAGTTTTCCAAGTGTTG
GAACGTTCTCAGTTTCGCTTAATCGCCATTTGATGAGGCTGCTTCCAAGA
TCGGTCCGATCCAAGTTGGCCTCCTCCTCAGGCGACAACTTGACTATAAA
ATCTGTTTTATTCTTCTTTTCGGCTGTTGGTTTAGGTTTTTCTTTGTTCC
CCTTGTTTAGTTCGTAGCCCAAGTAGTGGGCAGGTAATGACGATCTCAAC
TCAGTGACCTTTCCCGCAAAAATGGCTTTCACGATTCGATTAAGTCTGTC
TGAAAACGTTTTTGCCGATTTAGGTTCTTCTAAAATGGCTGTCTCTATGG
CGTTATTGCCTTCGGCGAATAACTCCATGTGTGCTGCTTTTGCAATTTCA
TGGTCTCGCTTCAACCCTTTGAACAGATTCGCGTAGTACTGTTGCTGCTT
TTTCAACTCGCTTTCTGCTACCACGTAAAGCCGTTCCTTGAGGAATAGAT
TTCGACGTAGTACGAGCCCCTCAGATGCTGGAATAGTTGATTTTGTAGTG
TTCCTTACGTGTTCTTTGCGAAGTTTATTTTGTAATTCCTCGATTCGTTT
CTCAAGTCGATATTTCGTGTTATCGGCTTCGCTGGATGTCGACTCGAGTT
GTTTTTCTATATCTTTCTCACGTGAATGTATGGTTCCTATCAGCTTTTGT
TTCTCTCGTTTCCACAAAACGACTGTGCTCTCCTTCTGTAATCTGCAAAG
AAAGACAACAAAGTTCATTAAATTCTGAAGACGGTGGGAGAATAGAAAAA
GGAAAAATAGCACTCCACCTTCTTGGTTTAGGAACTTGGCTCATTTTACT
TAATAAGTTAATGAATTTTACAAAACTGTCAGAAAAGACAAGCCAACAGG
TTGCATTGGCTTTATAGGATAGTATTTATTCTTCAGCTTTCTAGAGAAGA
CAAATCAAAAATGTTAAAATTGCGTTAATCAAAGTTTCTAAAAAAAGAGT
GGCTCCATGGCGTGGAGTAACTTTAGAACGCTATAAGTGGCTCCGATTAT
AAAGACACTTTTTGAGAAGAGAAAAACCGATGACTGAAGATGACTTACTG
TTGTATTCGCGTATTCTTCTCGTCAATTTGTTGTTCCAGAACTTTACATC
GGGCAGTCAGTGTTCTCTTTTCCACAAGGACTGTCTCATTTCGTTTCAAC
TCCTCCATCAATTCTTTATCTTTCTTCTGTAAATCCAACATCATTTTTTG
ATTTTCAGCCAAAATTTCTTCGGTTGATTTGCTTTTTATTGTGAGTTGGG
CTTTCACTTCCGTGCACAAAGTTTTGATAGCATTTTGAACGTGCTCATTC
AGTGACATGTACAGACTTGCGTATTCAGGCGCATTATCGCCCGCCTCAAT
GACCACACACTTCACAGCATCCAACTTTTCACGAAATTTCTCAACAAATT
GTTTTTCTTTACCCAATATGCGTCTCGAAGTGTCCGGAATCTCCACTCGT
CCGGTTGCTATCAGTTTTGTGTTTTCAAGATTGAAAATGACTTCTAGGGA
GTCGCACAGAACCGTGAAATTTTGACGTAAGTTTTCCACTGATGTTTTGA
GATGTTTCCATCCTGGGCCTTGAAAAAGCTCTTCATTATTTTCGTCAATG
GAAACCTGTCGAAAAGATTTTGTCGTCATTGCGTACTCTCACATTCTTTC
ATCAAAACCAAATGAACATAGTAACAAGAAAGATTTCACAGATTTCTCAT
AATTGTCTTCTCCTCTATATTTATCTGTTTTACGAAATCCTATGATTATC
AATATTCCCAACAGAGCAAGAGATACTCAATTATATAATGGTTGCCCACC
AACTGAAATTAATCAAAACAATTCGTACTTTCTCTCCATCCAAAGTTATA
TTATTATGATCTCAATATCTCGACTTATATTTTGAATGAGAGAATATTTC
GAAGAAGAATCAAATACATTTTCAATATAAAGTCACTTTTCGTTCTCACC
AGTTCTCACTTATTTAGCAAATCTTAATCTTCCAGCTCAATAAATTTGAT
TTTTTTTTTCTCAATAAACTGAACCCATAGAAAAGTCAACGTCTTTTCCT
CACTTCTGTTTAAACCAAAGTACACATAGATTTCGATGCTTTATCATTAG
CGCTGAATTAAGTGGCCATCCTTACTTGATTCGGAGCCATTACAAGCCCC
TGTTTACTTTTCAATTTCCTTATACTCGCTACCCGTTTTTTTATATGATC
AAACTATATAAGAACATAATGCTTCAATGGCCAAAAAATTAAGAACGATG
TCGAGAATAAGACTTTCCATAGCTTTAAACACCCAATTCCTTAGAAAAAT
GAACAAAAATCTCGCAATACGGTGAAAATAAGAACATATTAAAGAACATC
TTCGGTTGGAAACACGAAACATCTAAAGGCTTAAAAAATTTTGGATGTTC
TTATAAAAAACGTGTAATAGGAAGGAAGTTGTCTCATAAATGTAAAAAGC
CAAAATTAAGAGCAGTATGAATTCTTGAAGATAAAATTTTCGGGATAGTT
TAGATTAGATTCAAATAATTCGGTAACCTTTGCTGCACTATGGAAATTAT
GTACGTACAGGTCGTGAGATGACTTTTTGAATTGTTTTTTTTTTCAGATG
TTTTTCGAAGACAACATCGACGATGATAAATATTGTGGACATTTATTCGG
ACTTGGCGCCTCATACTCTAATGGCGTATCAGCAGTGGCGTTCAAAATCG
GACAGGGCGTGGAAGGAACCACATAAAGGGGCGTACATGGCTGTTGTTTG
AAGGATGAAAGGCTTTACAAGATCCATTTAGATTGTGACAATGAACTACA
ACTAAAGATGCGCAGGTTTTGTTACAGATTTTGCGTTGATTTAACATCGA
TGGGAGGAAACTAAATGATAAATAAAAACGCCAAAATGTCTCTAAAGGGC
GTCTTAATGAATGAATGCTTCTTGAGACAAAAGGACTAATTGAAATTACA
CTGTAAATATATTTTTTACCCGATGAGTTTAAAAAATGGTGAGCAAAGAA
AAGTTGTTCAAATTATTTTGGAAATGATGACTGGCTTCGTTTATTTTGCT
TGAAATCAGTACGTCACTTATAGTGTGGTTATTTCATGGGCCAAGGTTAA
GTTTATGCAACAACTTTTTTCACAAAATATGTATGTTTAAAGATTAGAGA
TTGAATTTTTGTTTGATTTCTGATGTTTTTTTGAAAATTCAATCTTGATG
CGATGGATGAGATATCTACTAAAGTAAACACAAAGAAAGAAAAATAGTTT
CAGTTTTTCTTTGCTTTTTATTTCTTTTCGACCTTTTGCTTACATACATA
TCAAACCATACATGATGCTTGATATCTATTCTCACTTGTCGCTGTATTGA
TGTGGTGGCTACTTTTAGAAGGAATGGTTTTACAAAANCCAAACCGTACA
TGATGCTTGATATCTATTCTCACTTGTCATTCTATTGATGGTTACTTTGA
GAAGTTATGGTTTTACAAAAGCAAGATTTCAAAATGGAGGAAGAAGTCGT
AGATACATCAAAAAACACTGACAAGGTATCGATTTATATGAATAAGCCTA
AGTTACATCCTTTATGGCCTTTTCGTAAAAGTAACATGAGTTTACTCCCG
TTACAGTTATAGTTATGAATTTTATGGATTTGCTCTGCTTAGAATCTTCG
ATGTATAATTTGCCACTCGATGCTAGGGATTAACAATTTTGACTTAGTTC
ATGCAAAGTTTGACCTCTCCTGTAAATCTGATATCAGCTTAAAGCCAAGT
CTCCAAGGCACTTAAACACGCTTTGCAGGGATCCATTCATTAATGAGTCA
AGTAGTCTAACAAGAATAAAAGCTTTCCTACACCTAATGCAAATTCTTGT
ATAAACACAAAGCATGTTCCTTTTAAGAAATGTTACGTATACATATACCA
CTTATGATTTATATCTTTTTTTGACAAAAATGATTTTTCAGCGCATGAGA
TTTAATTGCCAAATTTTGTTAGTATGACTTGGGTTAACTGCGATTCCTGT
TAATGGGGAACTTTTGGTAATTTGTTGATTTTCTTGTACTGACTCTTTCA
ACTTATCAAATATCCATGTCAGGCAATACCCGTTAAAAAGAACATGCTTA
TAAAAACATTGTTACTTTTGTTAATTGTTTAACCGCACTAATGAGTTGAC
AAATGGTTTGTTTGAGTGATCGTGATAAGACTTTAGGAGACTATGCTAAT
CCTCTCATCGTTTGTGACAATTTTTCCCTTTTCTTTCTTCGTGCTGTATG
TTAGCCATTTAAAATAAGCCCTCATCCCTCCCTACCAAGAAAGGTTTTAT
CAGGTCCACTAAGAAAGCCTATTGCCAATATGCTGACACATTTCTTATGC
ATTCTGTTCCCTCTGTAGGTTCCTTCACCCTCTTCATCAATCAAATCACC
ACGGATGAGATATGGCTGCTACTCTGAAAACCTCAGCAAGGTAGAGTTCT
TATTTTCTCTTTGCATATTTTTCACTCAGAACTATCTTGATATAATTGTA
ATGCATATTGGATATCTCATCCTTAGAAAGGAAATGTTTATCTTAAAATG
TTATCAGTCAAGAATAGAGACAAATTTATTTTCCGATACTCGGAGTTTCG
TGCCGTTTCAGGCAGTCTTCAGTGTCTTCAGTCAGATGGTATAGAGCACT
GTCTTGAATCGCAAGTCAGATTTGCAAATATCTTAAAATGTTACGTGACT
CCTTAAGCCACATCTTTCTTCTTTTTTTTTCTAAACTTGTATCCAGCTCC
TTTAGTTGACGCAGATTGATAAAATCAAATTAATAACTGATGAATACTAG
ACTGGAGTCGTTTATAATGTGTGTAGTAGTAGTAGTATAGGCGTTATATG
ATAATACGATTATTGTTACGGGATTTAGTTTGTATAAACGACTGGAAGAA
TCGGGTGTTCCGGCCTTTTAGAATCCCCGGCTAGCTACGCAGAAACTTGC
GTAGCGAGAAAACAATATATCAAGCAACAACAAACTCTCAAAACAAAATC
AACTAAAATGAAACATTTTTAACACACGAATCCACACACATTTTCTTTTT
CAAGAATTTTTTTTGAGCGGGAGAAAATTATAATTGCAATATTGACACTT
TTCTTTTGTTTGGAGTTAGTGCACAAAGGTTTCTAGACGACTAAAATTGT
CCCCTCCATTACCTTTTGCTTTATTTCTACTATGTTCGAATTGGTCGTCT
AGCTTGCTAGACTAGATGAATACAGAAGCCACTCATTGCTTGAAGCATAT
TATATAGAGGCAACAAAACAAGNCCCCTCCATTACCTTTTGCTTTATTTC
TACTATGTTCGAATTGGTCGTCTAGCTTGCTAGACTAGATGAATACAGAA
GCCACTCATTGCTTGAAGCATATTATATAGAGGCAACAAAACAAGCAGTA
AAATTCATAGCCAGTTAATCATAATATCTTCGCGACCTCAAATCAGTGAA
TCACAAATAAAAACTAAAGTTTCATGATGAGTTATTACCACACTCCATCC
TTAGATTTTCAACAATAACTTGATAAAGTATAAACTTTCTTGTATTTTCT
ATTCAGGGCTCGAAATAACGGTCGGACATCGGACATTGTCCGACCCAAAA
ATCACAATTTTCAAGCTAAAGCAACCCTGATCGGACATTTTGTCCGACCC
ACTTGAAATCGTTATTTCGAGCCTTATATGCTTGATACAGTAAGTCAACC
AGAATCAGACATTTCATTTATATCTTTCAGCTTATTTTATTGCATGATCA
CGGTATCGGAAGCCCTTGTCTTTACTGCCAACATTGTAGTGGATTGGAAT
TACATTTCTGGAGGTATGATATCAATCTTTCTTTTATCTTTGATAATGAA
AATCTCTCAGAGCTCTTTTATTGAACACCTGTCTCTATTTTCCAGACATG
TAGGGATAAATAAAGGTTCGGTTAAATGCCAATGATGACTTTCTCAAGGA
CAAGGGCTTTTATGAGGACGAGAATTCTCCAATGATAGTGATGACACTCA
GTGTAATTTTCTAGTGTTTTTTTTCTTTTCACTTGGGACGATTTTGCAGT
TGGTAGGGGTCTTACGGAATTGCCTTTTCATTTACACGTTGTTTTTTTAT
TAGAACACCTAAAATTTGGCTGAGCCTGGATGTGCTTATTTTTTAGCAAT
TTCCAGCCTACAATATTCTTAAATGCGTTCTTAATTTTTCAGACTACTCT
AAATCGACAATATCATGCAAAAATAAAGAGCACTTAAAATTGGTAAAATC
TGGAGAATATTTGATTCTTGATTTTAGAAAATCCATCTCTAAGTTCGGTT
AAAACTGCTTGAAAAGAGGAAAAAATTGTTGTTTCTTGTCATTTTTTTTC
CAAACTGAGGCTGGGCGTGTTCTTACGATGTTCTTAATTTTTCGACGAAT
TTCAGCCTGATTGTTCTTATAGACTGGGTTCTAATAAAGAACAGTGTAGC
AGCACTGACTCAGACTTTGAAGATAAGAAAATCAGTATGAATCCTACGAG
CTGTCTTATCTTTTAGCACAAAACCTTTCTTCTTATCGACTTCCCTGTCG
TGCTGTAATTAAGTCAATTTTATTAAATTATTTTAATTGGTCTTTTACGG
GATCAGTCATAACGGCATCTTTACCTTATCAAAATAAACAAATTGATTAT
CTTTTGAAATCTTATTTGAACCTATTTACATAACAAATGTTAATTTATTA
ATTTATCTTTTATATTCTTTAAAACTTTAAGCACCGAAAAAAGTGTGGCC
TTACTCGCTAGGCAAATTATATTGAACACTTAATTGATCGAGTGAGGCCA
TTCTCGACAGCGTGCTTTGTAAAAGGACCTTAATAGGAAAAACATGAGAA
ACTCGTATTAAGGAATCATTCCTAATTTGGTGTGTGTGTCTATCCTTTTA
ATTTTGATGAACAGAAAAACATGCAAGAATTGTGGATGTCGAGCAGAAGA
TCATGAAGTACAAATCAATGAAAGTATCCATGATTCGTTAGTCGATTCTC
TCCTACACATGAATGAGGACGACCTTTCAGCTTTTATCGAAATCGAAAGT
GAAAATGAAGATCTACAATCTCATCCAATATTGAAAGAGTTTGTTGGAAA
GAGCAGTCAAGTTAAAGAACGAAAGACTTCCCGCTTATTACCACCACCGG
TTGCTAAGAAACCATCCGGAGAGAACCAATCTACTAGCAGTATGACGGAG
CATAAAGAAACACCTGATGAACGACAAGAGGCCACTGAGGATTGCCAGTA
CCGAGAGAAG

Coding sequence (CDS) from alignment at scaffold_455:324664..333373-

>TCONS_00066456 ID=TCONS_00066456|Name=TCONS_00066456|organism=Clytia hemisphaerica|type=CDS|length=2280bp|location=Sequence derived from alignment at scaffold_455:324664..333373- (Clytia hemisphaerica)
AAAAACATGCAAGAATTGTGGATGTCGAGCAGAAGATCATGAAGTACAAA
TCAATGAAAGTATCCATGATTCGTTAGTCGATTCTCTCCTACACATGAAT
GAGGACGACCTTTCAGCTTTTATCGAAATCGAAAGTGAAAATGAAGATCT
ACAATCTCATCCAATATTGAAAGAGTTTGTTGGAAAGAGCAGTCAAGTTA
AAGAACGAAAGACTTCCCGCTTATTACCACCACCGGTTGCTAAGAAACCA
TCCGGAGAGAACCAATCTACTAGCAGTATGACGGAGCATAAAGAAACACC
TGATGAACGACAAGAGGCCACTGAGGATTGCCAGTACCGAGAGAAGCTTA
TTTTATTGCATGATCACGGTATCGGAAGCCCTTGTCTTTACTGCCAACAT
TGTAGTGGATTGGAATTACATTTCTGGAGGTTCCTTCACCCTCTTCATCA
ATCAAATCACCACGGATGAGATATGGCTGCTACTCTGAAAACCTCAGCAA
GATGGTTTTACAAAAGCAAGATTTCAAAATGGAGGAAGAAGTCGTAGATA
CATCAAAAAACACTGACAAGAAAAACATGCAAGAATTGTGGATGTCGAGC
AGAAGATCATGAAGTACAAATCAATGAAAGTATCCATGATTCGTTAGTCG
ATTCTCTCCTACACATGAATGAGGACGACCTTTCAGCTTTTATCGAAATC
GAAAGTGAAAATGAAGATCTACAATCTCATCCAATATTGAAAGAGTTTGT
TGGAAAGAGCAGTCAAGTTAAAGAACGAAAGACTTCCCGCTTATTACCAC
CACCGGTTGCTAAGAAACCATCCGGAGAGAACCAATCTACTAGCAGTATG
ACGGAGCATAAAGAAACACCTGATGAACGACAAGAGGCCACTGAGGATTG
CCAGTACCGAGAGAAGCTTATTTTATTGCATGATCACGGTATCGGAAGCC
CTTGTCTTTACTGCCAACATTGTAGTGGATTGGAATTACATTTCTGGAGG
TTCCTTCACCCTCTTCATCAATCAAATCACCACGGATGAGATATGGCTGC
TACTCTGAAAACCTCAGCAAGATGGTTTTACAAAAGCAAGATTTCAAAAT
GGAGGAAGAAGTCGTAGATACATCAAAAAACACTGACAAGAAAAACATGC
AAGAATTGTGGATGTCGAGCAGAAGATCATGAAGTACAAATCAATGAAAG
TATCCATGATTCGTTAGTCGATTCTCTCCTACACATGAATGAGGACGACC
TTTCAGCTTTTATCGAAATCGAAAGTGAAAATGAAGATCTACAATCTCAT
CCAATATTGAAAGAGTTTGTTGGAAAGAGCAGTCAAGTTAAAGAACGAAA
GACTTCCCGCTTATTACCACCACCGGTTGCTAAGAAACCATCCGGAGAGA
ACCAATCTACTAGCAGTATGACGGAGCATAAAGAAACACCTGATGAACGA
CAAGAGGCCACTGAGGATTGCCAGTACCGAGAGAAGCTTATTTTATTGCA
TGATCACGGTATCGGAAGCCCTTGTCTTTACTGCCAACATTGTAGTGGAT
TGGAATTACATTTCTGGAGGTTCCTTCACCCTCTTCATCAATCAAATCAC
CACGGATGAGATATGGCTGCTACTCTGAAAACCTCAGCAAGATGGTTTTA
CAAAAGCAAGATTTCAAAATGGAGGAAGAAGTCGTAGATACATCAAAAAA
CACTGACAAGAAAAACATGCAAGAATTGTGGATGTCGAGCAGAAGATCAT
GAAGTACAAATCAATGAAAGTATCCATGATTCGTTAGTCGATTCTCTCCT
ACACATGAATGAGGACGACCTTTCAGCTTTTATCGAAATCGAAAGTGAAA
ATGAAGATCTACAATCTCATCCAATATTGAAAGAGTTTGTTGGAAAGAGC
AGTCAAGTTAAAGAACGAAAGACTTCCCGCTTATTACCACCACCGGTTGC
TAAGAAACCATCCGGAGAGAACCAATCTACTAGCAGTATGACGGAGCATA
AAGAAACACCTGATGAACGACAAGAGGCCACTGAGGATTGCCAGTACCGA
GAGAAGCTTATTTTATTGCATGATCACGGTATCGGAAGCCCTTGTCTTTA
CTGCCAACATTGTAGTGGATTGGAATTACATTTCTGGAGGTTCCTTCACC
CTCTTCATCAATCAAATCACCACGGATGAGATATGGCTGCTACTCTGAAA
ACCTCAGCAAGATGGTTTTACAAAAGCAAGATTTCAAAATGGAGGAAGAA
GTCGTAGATACATCAAAAAACACTGACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041574XLOC_041574Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066456-exon-scaffold_455-1575043694:332979..333373TCONS_00066456-exon-scaffold_455-1575043694:332979..333373Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1575043694:332676..332753TCONS_00066456-exon-scaffold_455-1575043694:332676..332753Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1575043694:328613..329326TCONS_00066456-exon-scaffold_455-1575043694:328613..329326Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1575043694:328399..328524TCONS_00066456-exon-scaffold_455-1575043694:328399..328524Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1575043694:327484..327555TCONS_00066456-exon-scaffold_455-1575043694:327484..327555Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1575043694:326111..326193TCONS_00066456-exon-scaffold_455-1575043694:326111..326193Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1575043694:324664..325009TCONS_00066456-exon-scaffold_455-1575043694:324664..325009Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1510915933:332979..333373TCONS_00066456-exon-scaffold_455-1510915933:332979..333373Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1510915933:332676..332753TCONS_00066456-exon-scaffold_455-1510915933:332676..332753Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1510915933:328613..329326TCONS_00066456-exon-scaffold_455-1510915933:328613..329326Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1510915933:328399..328524TCONS_00066456-exon-scaffold_455-1510915933:328399..328524Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1510915933:327484..327555TCONS_00066456-exon-scaffold_455-1510915933:327484..327555Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1510915933:326111..326193TCONS_00066456-exon-scaffold_455-1510915933:326111..326193Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1510915933:324664..325009TCONS_00066456-exon-scaffold_455-1510915933:324664..325009Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1491911889:332979..333373TCONS_00066456-exon-scaffold_455-1491911889:332979..333373Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1491911889:332676..332753TCONS_00066456-exon-scaffold_455-1491911889:332676..332753Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1491911889:328613..329326TCONS_00066456-exon-scaffold_455-1491911889:328613..329326Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1491911889:328399..328524TCONS_00066456-exon-scaffold_455-1491911889:328399..328524Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1491911889:327484..327555TCONS_00066456-exon-scaffold_455-1491911889:327484..327555Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1491911889:326111..326193TCONS_00066456-exon-scaffold_455-1491911889:326111..326193Clytia hemisphaericaexon
TCONS_00066456-exon-scaffold_455-1491911889:324664..325009TCONS_00066456-exon-scaffold_455-1491911889:324664..325009Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066456-proteinTCONS_00066456-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:324664..333373 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
103.167	101.516	126.282	124.393	44.0344	33.0866	38.5089	42.3139	25.8195	21.7314	20.5801	18.9109	26.1722	33.6644	25.664	22.5734	32.4296	33.9077	18.7188	15.7775	31.0906	30.8153	41.8653	35.9107	27.7363	37.0244	18.5821	19.3437	24.3995	25.1848
Blast
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BLAST of TCONS_00066456 vs. Swiss-Prot (Human)
Match: CNOT7 (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 6.461e-54
Identity = 88/110 (80.00%), Postives = 99/110 (90.00%), Query Frame = 3 
Query:  216 SGYDFGYLLKLLMNQALPPEESDFFDLLRLYFPKIYDVKYLMKSCKSLKGGLQEVSEILELERVGPQHQAGSDSLLTGAAFFKMREMFFEDNIDDDKYCGHLFGLGASYS 545
            SGYDFGYL+K+L N  LP EE DFF++LRL+FP IYDVKYLMKSCK+LKGGLQEV+E LELER+GPQHQAGSDSLLTG AFFKMREMFFED+IDD KYCGHL+GLG+  S
Sbjct:  158 SGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSS 267
The following BLAST results are available for this feature:
BLAST of TCONS_00066456 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNOT76.461e-5480.00CCR4-NOT transcription complex subunit 7 OS=Homo s... [more]
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