TCONS_00066425 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066425
Unique Name	TCONS_00066425
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3885

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_455:338263..348854+

transcript sequence

>TCONS_00066425 ID=TCONS_00066425|Name=TCONS_00066425|organism=Clytia hemisphaerica|type=transcript|length=3885bp
ctttgttaaatttttacTCAGTGAGCGGAAAACATAACGTCATAGCAATC
AGAGGAATTTTGCTAATATTCTTCtatattttaaaaagtttaacataatt
ttgagttttttttgacaaaactcTTTGTAATTATATAGCTTTTGAGTAAT
CTaatcgattttttttaattttacaatttgttttacCATTATAcagattt
tatttcatttatttactgaTCAAAAGCTATATTCTCCTACGCATCGAAGT
TCACCATGTACGGAGCACGGTCCGAATGGTGGTGAATTGAGTGAAAATGA
TTACGCATACCAATGTTTTTCCAAACCTTTACAAACTGCTGAATTAAAAA
GTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGATCTGGCAAAATGGT
GATGGGCTCACCCAACGCTGAAGGCTCTGTACAAACAGTTTCCACACTGG
CGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCTGGTAACTATGAAAGT
GCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACTGG
ATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGACC
AATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTGCA
GAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTTAA
AGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTTCA
TTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATTTA
GAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGAACT
ATATTGTGTACGAAGTGATCTTGGAAATCTACTGAAAGCACTTGGTCGAC
TTGAAGAAGCTAAGGCATGTTATCTCAAAGCCATTGAAACTCAACCAAAC
TTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTAATGCTCAAGGGGA
AATATGGCTTGCCATTCACCATTTTGAGAAAgcTGTTCAAATTGACCAAA
ACTTTCTTGATGCCTACATAAATCTTGGCAATGTGCTCAAAGAAGCCAGA
ATATTTGACAGAGCTGTGACTGCCTACTTGCGTGCACTAACAATAAACCC
AAATCATGCTATTGTCCATGGAAATTTAGCATGTGTTTACTATGAGCAAG
GGCTCATTGATTTGGCAGTTGATACTTACAAAAGAGCTATTGAACTACAA
CCAAACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCTTAAGGAACA
AGGCAAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTCTAACCCTAT
GTCCATCACATGCAGACTCGTTAAATAATCTAGCAAACATCAAAAGGGAA
CAAGGCAAAATTGAAGATTCCATTGGATTGTACATGAAAGCGCTACAGGT
ATTACCCGATTTTGCAGTGGGATACTCCAATTTAGCTTGTGTCTTACAAG
AGCAAGGACGCCTCAAGGAAGCTTTACTGTATTATCAAGAGGCAGTGAGA
ATCCATCCGACTTTTGCTGATGCATACTCAAACATGGGGAATGCCTTGAA
GGAAATGCAGGATATTCAAGGTGCAATCCAGTGCTACACCAGAGCCATTC
AAATAAATCCTGGTTTTGCAGATGCCCATAGTAATCTTGCATCAGTATAC
AAAGACTCAGGAAATATTGCTGAGGCTATTCAATCCTATAGAACTGCTCT
TAAATTGAAACCAGAGTTTCCAGATGCTTATTGTAACCTTGCACATTGCT
TACAAATAATTTGTGATTGGAATGATTATGATAATCGTATGAAAAAACTG
TTAACAATAGTTGATGATCAACTTGGTAAAAATCGATTGCCTTCAGTTCA
TCCGCACCACACCATGTTATATCCTTTGTCCCCACAACAAAGAAAGGCTA
TTGCTAATCGTCATGGAAACCTTTGTCTTGATAAGGTATGTAATGACTGG
TTTTCAATAACTTGAATTACAGTATGATATCTTTAGTCAcataactttgt
attgaaaACCCAGCTTCAGTTAAGGTtaagccaattttcattcattgatt
GAGTCCTCTCCTGAAGCTTCCAATTTGTGAAggaaattttatgaattttt
tggacctccatttctttttttttatctcaCAATTGATCACCTGGGAATCA
ATTTGAAAGAATGGCTGGCAAACTTGCTTTATATAATTCACATAACCTTT
TACATAATGAGCATTTTATTTTAGACAAAAATTAGGGGTTGTTttagaaa
atcatgaaaaaactaaatttgggtAGGAACTTATTTTGATGAGACGGCAA
TATTTTTAAGTCCACTAAAgtgtagactagtaaactagtcggttattact
tataataaaactgtcaatcaaataatgttaacactaattaaatattcatc
gtgcgtgagagaaaaggaaaataaccgactagaagcttcttccaacgcct
tttttttcacctaaaatcgtaaggagagacatacagatttctgtatgtct
gacccgtgcgggatcgcatttatttttctttctgttttttaNCCATACTT
CATGTTTAGTCGCTTTgaaatttcagcttgagaaaTCATTTACATTACTC
ATGTTACTTTGCTCTATCGACTGCTATCAAGTCAGAAAGGTGGAAGAATG
TTTTTGATGTAGCACGAGACTGGCTTGCTATTTAAAATTCATACTTaaca
aaatatcaattttatttagGTCATGTGGCTTGGTTATCCTGGCACTAGTG
GTGCAACCTATATGGATTACATCATTACCGACAAAGAAACGTCGCCGTTG
AAATATACGGAGCATTACTCTGAGAAATTTGCGTACATGCCACATACGTT
CTTTGTTGGTGACCATAAACAGATGTTCCCTCATCTTATCAAGGATGTCA
CTCAAGAAAAACGCAACGTAAATACAATTAATAGTGCAACAAACACTACA
TCGGTTATCACAACTAAAGGTGTGGAGCAATACATCGAAGAAAGAATAGA
CCAGCGCAAAGAAGAAGTTTCTGGAACGAAAGATAGCGGAGAACGTGTCC
CGGAAACCCTGCCACAAATGTCACGTGCTTCATACGGTTTACCTGATGAC
GCTTTTGTGTTCTGTAATTTTAATCAATTATACAAAATAGACCCTCAAAC
ATTCGAATCGTGGTGCAATATTCTCACACAAGTACCAAACAGTGTTCTTT
GGCTGTTAAGATTCCCACAAGTCGGTGAAACGAACGTGAAAGCACAAGCG
GTTGCTCACGGTGTCGCGGAGGAACGTATTATATTTTCAAACGTTGCTCC
CAAGGAAGAGCATGTACGTAGAGGACAATTAGGAGATGTTTGTTTAGATA
CGCCGTTATGTAATGGACATACTACAGGAATGGACGTTTTATGGGCAGGT
TGCCCTATGGTCACCTTGCCTTTAGAGACATTAGCTTCACGTGTAGCAGC
TTCTCAGATGCATGCGTTAGGAGTTTCAGAGTTGGTCGCAAAAACGAGAA
AAGATTATGAAGACATTGCTATTAAACTTGGAACAGACAAAGAATActac
cgaaaaatcaaactgaaagTATGGGATGGCCGTCTGTTGTCACCTTTGTT
TAATACTCAACAATATACACTGGActtagaaaagaaattttacaaaatgt
gGCAGAGATATGAAGGAGGTCAATCTCCTGATCATTTAACAGATTGAAta
acttgtttttaacttttgtagTAACCATAATTATTATCATAATATTCTCT
ATTTCTATATTATCTTTTAATTTTATACTTTAATCAGAGatttaatttct
caaatttcgaggtgttataattattttaaatgatc

Run BLAST on NCBI

transcript from alignment at scaffold_455:338263..348854+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066425 ID=TCONS_00066425|Name=TCONS_00066425|organism=Clytia hemisphaerica|type=transcript|length=10592bp|location=Sequence derived from alignment at scaffold_455:338263..348854+ (Clytia hemisphaerica)
ctttgttaaatttttacTCAGTGAGCGGAAAACATAACGTCATAGCAATC
AGAGGAATTTTGCTAATATTCTTCtatattttaaaaagtttaacataatt
ttgagttttttttgacaaaactcTTTGTAATTATATAGCTTTTGAGTAAT
CTaatcgattttttttaattttacaatttgttttacCATTATAcagattt
tatttcatttatttactgaTCAAAAGCTATATTCTCCTACGCATCGAAGT
TCACCATGTACGGAGCACGGTCCGAATGGTGGTGAATTGAGTGAAAATGA
TTACGCATACCAATGTTTTTCCAAACCTTTACAAACTGCTGAATTAAAAA
GTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGATCTGGCAAAATGGT
GATGGGCTCACCCAACGCTGAAGGCTCTGGTAAGTTAGTATTTGAGACTG
GGATTGCGATTGATGGACTGACGTTATTCCCGAGGGAAGAGTGTGCGACT
TGGCACTTCCACTTTCGTTTTGAACAAAAGGAGGGGAAAAAACTTGCGAC
ATGAAAGGGAAGTGGTACGATCACCAGCGGGAATGACTTTTAGATGGTTC
TTATCCTATGCCTACtctaaaaaatttttgtttacactGTTTCAGACCTC
CCTTAGAAtattattgtttcaaaaagGAAATGAGTTGACTCTGGAGCTTA
TTATAAGCTTATTTTTgtgttgtgattttttttgaaatatttgctatAAT
TTGCTTTGCGAAGTCCTGAGCCATTTTTTGGGGGCAAATGGGTACTGTTT
AGTATGTCTCAGCATCAGAGCAGTACAGGGAACCTTTTCAAACCCTGAAA
ATGTCTTTAAGAGTTGTGAAACCAGCCTTCAGCAGCCTGTAGAAGGTTCT
CAAAATCTGATCAAACAAACTTGTCGAATCCAATCAAACAATtgaactaa
tcaaactccatcgaacgattaaagttcaattaaaaaaattaatcaaacct
aatcaaacactcacaatttttgaagcaatagcagttcgattggttcggtc
aggaaaaaaacttcgattagttcgatgatattaaatcctcatatcttccc
ttgcttgcaaaaactttatcctgccacgcgattgccatttcgacagttcc
cggacttaacaaCTTAAagtttattgtacccggatatttgtccgCGGCCC
CTTTGTTGCGATTTTGCACGCAGCCGAGTGGTGGATTCCTACGCCtcaac
aaaccgcctctggcgctaaaaggatacagggaAAGTGCGTAATCCATAAT
CGGtttaatttcccgatttacattctgaatttggctttgaaaagaagcta
atatacggtggtggagcagcacaaacttgtcgaacaattaattggtttat
cgaactgattgaaccgaaacccattgataGAACTTATTAAACACTCAGGA
TCTTTTAAtaaatcttagagttcgattaattatTTTAATCAATCTTTAAT
CGTTTgatgaagttcgattagttcaattgttcgattggttcgacaagttt
gattgatcgggtctggtataTTCcttgaagtcaggtaacttgcatcagtg
gagggaaacatACAtacccctcaaatgaatgacctgtctggtcattaaaa
tacaaagttaaatacaaacaaaaatggtagagtagagctgcgagcggagc
tgcatggttcatttgttttgaaatttttctgctttgtttggtcagtcatt
tgagggctaatagaccttttttcaaagaggacgtcttGTTGAAtgattat
gtagtccagccgtaaaaacaatgatagagccatgcataattactgtatca
tgcatattgtaataattatgcatggttttatcattgtttttctgctggac
tacataattattcaacagggtggcctctttgaaaaaggtctattgaagtt
tccctccactgatgatgcaagttacccaacttcacggtatAGAAATGTAG
GGCTCCctaattttaaaatatattttttgggaGATCGTAAAATACAGTAG
TTGCTTCCTCAAGATttctaagccaatcaaaatatgTGCACAGAAAACTG
TGCTAGCAGTGGCGTTGTGACaagcggagcttttttgaaaggGCGCCAAA
AGAGACTTTTTTAATTGCCCTATCCTTAAATATCATACTTTAGGCGCCTT
AAATCGCGCCCCTGGatcaattttactgagatagttttaaaatacttgca
atttttttttgctcacttcGCTTGCAATACAGCTAATTGGTAACTTCATG
CAATCTTTAGctaaatttacaagtttttttgtgtacaatatagcattaNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNagccaaagaaatttttagaatcataatttccaa
aacttcagaaaataacagaagaatgaagaagagaattacaaacaaaattg
gtgattttatttttgtttgatcTCTTATAAGTAACACAACTTATAATAAC
AAcaacattcgaaaacaatagaatgtcttcatttctctCAAGATTAAAGA
TAGGGGATAATGCGCGAAATTTTTTACCCCccccttcataatttttttac
caagcatagggttaagcatatatagtcgaggctcaaaattgagctttact
taagcatagtgagcttcagccgaaatttaccgtatgcttataaaacgaaA
TGAGTGTATTGAATGAAAAGttaactgcgccccaagaccaatttgctgac
aagGGGGCTTGGAAGCTTTGGCAATTTGCAAGAgtgttttccattcattt
ttggatttctcaacaattattatattttatagTTAGAGATTGTAAGAGTT
TGTGCTTAAAAGGACGAAAAGAGAGGGGGTtgaggaattttcatttttaa
gagggGTTGATCTAAAAAAGGGGGTACGCtatcaaaaaatcagaaagata
aGATCTAGCATACAAATTTTTGTTGCTAGTTTTTTCACTGATTACCTTTT
TCCTCAAATCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTGTTGCT
GAACAATGTCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCCACACT
GGCGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCTGGTAACTATGAAA
GTGCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACT
GGATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGA
CCAATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTG
CAGAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTT
AAAGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTT
CATTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATT
TAGAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGTA
AGTCAAATTTGTACAGATTTCAGCATTCACTGATTGGGGACTTGCTAAAT
CATTTTCAGGCTCTTATGTTTGTATGTCATACACTAATCTGTGTAAGGCT
CATTTTCTATATAGAGCCAATTTAttttatgcttatagaaaagtgaataa
aattttatatacTTTTCAGGAACTATATTGTGTACGAAGTGATCTTGGAA
ATCTACTGAAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTAATGAG
AATTCTTTTATACCTCTTTACTTTATGAACAGTTTTTCGCTTCCCTAAAG
AGAAACATCTGAATCTAATTGCCTCTTTCTTTATTTTCNTAAGAGGGGGT
TGATCTAAAAAAGGGGGTACGCtgtcaaaaaatcagaaagataaGATCTA
GCATACAAATTTTTGTTGCTAGTTTTTCACTGATTACCTTTTTCCTCAAA
TCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTGTTGCGGAACAATG
TCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCCACACTGGCGCTTG
CGGAAGCTGCACATCGAGAATACCAAGCTGGTAACTATGAAAGTGCTGAG
AAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACTGGATGCCT
CTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGACCAATCTG
CACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTGCAGAAGCT
TTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTTAAAGATGC
ACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTTCATTGACG
GCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATTTAGAGGGA
GCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGTAAGTCAAAT
TTGTACAGATTTCAGCATTCACTGATTGGGGACTTGCTAAATCATTTTCA
GGCTCTTATGTTTGTATGTCATACACTAATCTGTGTAAGGCTCATTTTCT
ATATAGAGCCAATTTAttttatgcttatagaaaagtgaataaaattttat
atacTTTTCAGGAACTATATTGTGTACGAAGTGATCTTGGAAATCTACTG
AAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTAATGAGAATTCTTT
ATACCTCTTTACTTTATGAACCGTTTTTCGCTTCCCTAAAGAGAAACATC
TGAATCTAATTGcctctttctttattttctatGGTTCCAAACAGGGTATC
AACTGTGAATCAACTACATGGAATCCTCAATGATGCTGTTTATCCTGACC
AGTCACACATATTTTATCTTAGCACTAGAGGATTGTGAAAGCTATTACTA
GAAAAACTCTTTCTCACTAGACCTAGAACATCTAATGACTAAATCTTAAG
TTAATAGCCTTTTCAATCTTCTGATAATAACTTGTGATTGTTACATTGGC
CATGATTATTTTTCTTCAATGAAGGCATGTTATCTCAAAGCCATTGAAAC
TCAACCAAACTTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTAATG
CTCAAGGGGAAATATGGCTTGCCATTCACCATTTTGAGAAAGTAAGTTTT
GTCTATCAGAGGGAGTTGGTACTCAAATCTCAGACATAGTGGTGTTGCAA
AAGGTGGAATGCAAAATACaaagatttgagattttttttttgaaaaaact
tttgtaCTCATTGACTATTTGACAAATTCAATTTGTGCCAAAAAGGGTTT
TTGCATTGCATCGGtgtcaaaatgttttgaaagaatTGGTATAATTCATG
TGTACTAAAATGCCACTTTCTAAatctttgggggggggggtggtatgtaa
aatattctcaaaatcCCCTTTCAGCAACACTTATCTAGGTCTGACTCTTC
CTGTCTATAAATTAATCGTATTCCCTGTCTTTTTCTATCATTGAAGCTTT
TGACATTAACAGATTCTGTGAATTAAAGCTCCCATTTCTCTTGTTTGCCA
ATTCATATTGCATTAGGAAGTGAcatacattttatttttataagcaagtg
tatgccccttggtcaggctcaaGTATgattaagttctcaaagcatccagg
catagtttatgcttattatatgctgatgaatcatgcttatgattcacctt
gagccaagtttttagtgaaattacAGAAATGtcgtaaaaatttgttcata
tTTTGGGAGCAGtcgaatgtagctagccgtggaatttcttttttttttac
ttgacctctctaccaaacctttttaaacagataagaAATggcaacttgaa
aaatatttcaggctgacacaTATGCTTATGCTATGCTTAGGAATTcagca
aatctgagccttcatatgcttataagcgttctgcttataaaaaaaaaaca
tgtagtgtcCTGTCCtcatgattgaaaaattcaGTCTGCTTTTCTAAGca
tctttgtttacattaacccattttcgttctattttgtctagtattccttt
tgcaacaaaattttacgtttgtgtcaggttgacatttgagaaatttttat
gGGTATATTGGaggaactgatattttcagaattttttggggggaaatCAA
AAAAGGGGGCAAACAAAAAAACTGTCATAGGAGAAaaaagaatttggtgg
ggggaacaaaccctggagtgAGTGGGTAAAACCCATGTTGTTCACAAAGA
ACCTCATTAAGGCTGACTTTATCAAGATCTGTATCAGATAACTAATTTTA
CCCCATTTTCAGTTCACATTtacttttctttgaaataacTTCAGCCACTT
TTGAAACGCCTCaagaaaacagaaaatgaaaagttttgaaaattattttt
caggcTGTTCAAATTGACCAAAACTTTCTTGATGCCTACATAAATCTTGG
CAATGTGCTCAAAGAAGCCAGAATATTTGACAGAGCTGTGACTGCCTACT
TGCGTGCACTAACAATAAACCCAAATCATGCTATTGTCCATGGAAATTTA
GCATGTGTTTACTATGAGCAAGGGTAAGAAAtcttttccaatattttttc
atttcttaatCCACACATTGCTTGGATTAGTTTCCCTGTAATAATGTGAC
ACCTACTTCCAGGTTGGCCACCCTTTGCTTTGTCCAAAGTAATTTTATTG
CAGCTGTTCATAGCTCTTTATGATTTGAAGGATGGATCAACTATAAAGTG
AATTGTTTTAGTTCTGTTTATTATGACAGCATACCTATCACATGCAGCTA
CATTTAATCTTTGAGCATCAACACTGTCACTTTGAAGACTTATTGCTGAC
AGAAATCTCACAAATTTAGTGAGCAAAATTGTCTTATTCATTTTCAGGCT
CATTGATTTGGCAGTTGATACTTACAAAAGAGCTATTGAACTACAACCAA
ACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCTTAAGGAACAAGGC
AAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTCTAACCCTATGTCC
ATCACATGCAGACTCGTTAAATAATCTAGCAAACATCAAAAGGGAACAAG
GCAAAATTGAAGATTCCATTGGATTGTACATGAAAGCGCTACAGGTGAGC
CTAATAAACTATGTAATaagattgaaaattgatttcagatttttttacat
attaGACAGAAAGGGTAATTGAGTTGAGGGTGTGGTTAACAATACCCAAT
TTATATTTGTCACAGGTCTTTCCAGAGTTTGCTGCAGCCCACTCTAATTT
AGCAAGTATTTTACAACAACAAGGAAAACTCCACGAAGCATTGATGCATT
ACAAAGATGCAATAAGGTATTTAAAATGATTGTGTAATGCACCTTATTCA
TTTTCCATAAATACTGTCCTCTTGCAGGTATTACCCGATTTTGCAGTGGG
ATACTCCAATTTAGCTTGTGTCTTACAAGAGCAAGGACGCCTCAAGGAAG
CTTTACTGTATTATCAAGAGGCAGTGAGGTATTGTAATGGCATTTTTTAA
TAAGCTGAAAGTTTTTCTCTTACATGTCCAATATAACCTTTTATTACAAG
TTTATTTTTTGTAAGATTTAATTTGCTTGTTTTGTTTCTACTAAAATGAC
ACCTTTTAAAATGCTAATGTAATGTGTTTCTTCTCATTTGAAATAAACTT
TTTTTCAACAATTTTATTTCAGAATCCATCCGACTTTTGCTGATGCATAC
TCAAACATGGGGAATGCCTTGAAGGAAATGCAGGATATTCAAGGTGCAAT
CCAGTGCTACACCAGAGCCATTCAAATAAATCCTGGTTTTGCAGATGCCC
ATAGTAATCTTGCATCAGTATACAAAGACTCAGGAAATATTGCTGAGGCT
ATTCAATCCTATAGAACTGCTCTTAAATTGAAACCAGAGTTTCCAGATGC
TTATTGTAACCTTGCACATTGCTTACAAATAATTTGTGATTGGAATGATT
ATGATAATCGTATGAAAAAACTGTTAACAATAGTTGATGATCAACTTGGT
AAAAATCGATTGCCTTCAGTTCATCCGCACCACACCATGTTATATCCTTT
GTCCCCACAACAAAGAAAGGCTATTGCTAATCGTCATGGAAACCTTTGTC
TTGATAAGGTATGTAATGACTGGTTTTCAATAACTTGAATTACAGTATGA
TATCTTTAGTCAcataactttgtattgaaaACCCAGCTTCAGTTAAGGTt
aagccaattttcattcattgattGAGTCCTCTCCTGAAGCTTCCAATTTG
TGAAggaaattttatgaattttttggacctccatttctttttttttatct
caCAATTGATCACCTGGGAATCAATTTGAAAGAATGGCTGGCAAACTTGC
TTTATATAATTCACATAACCTTTTACATAATGAGCATTTTATTTTAGACA
AAAATTAGGGGTTGTTttagaaaatcatgaaaaaactaaatttgggtAGG
AACTTATTTTGATGAGACGGCAATATTTTTAAGTCCACTAAAgtgtagac
tagtaaactagtcggttattacttataataaaactgtcaatcaaataatg
ttaacactaattaaatattcatcgtgcgtgagagaaaaggaaaataaccg
actagaagcttcttccaacgccttttttttcacctaaaatcgtaaggaga
gacatacagatttctgtatgtctgacccgtgcgggatcgcatttattttt
ctttctgttttttaNCCATACTTCATGTTTAGTCGCTTTgaaatttcagc
ttgagaaaTCATTTACATTACTCATGTTACTTTGCTCTATCGACTGCTAT
CAAGTCAGAAAGGTGGAAGAATGTTTTTGATGTAGCACGAGACTGGCTTG
CTATTTAAAATTCATACTTaacaaaatatcaattttatttagGTCATGTG
GCTTGGTTATCCTGGCACTAGTGGTGCAACCTATATGGATTACATCATTA
CCGACAAAGAAACGTCGCCGTTGAAATATACGGAGCATTACTCTGAGAAA
TTTGCGTACATGCCACATACGTTCTTTGTTGGTGACCATAAACAGATGTT
CCCTCATCTTATCAAGGATGTCACTCAAGAAAAACGCAACGTAAATACAA
TTAATAGTGCAACAAACACTACATCGGTTATCACAACTAAAGGTGTGGAG
CAATACATCGAAGAAAGAATAGACCAGCGCAAAGAAGAAGTTTCTGGAAC
GAAAGATAGCGGAGAACGTGTCCCGGAAACCCTGCCACAAATGTCACGTG
CTTCATACGGTTTACCTGATGACGCTTTTGTGTTCTGTAATTTTAATCAA
TTATACAAAATAGACCCTCAAACATTCGAATCGTGGTGCAATATTCTCAC
ACAAGTACCAAACAGTGTTCTTTGGCTGTTAAGATTCCCACAAGTCGGTG
AAACGAACGTGAAAGCACAAGCGGTTGCTCACGGTGTCGCGGAGGAACGT
ATTATATTTTCAAACGTTGCTCCCAAGGAAGAGCATGTACGTAGAGGACA
ATTAGGAGATGTTTGTTTAGATACGCCGTTATGTAATGGACATACTACAG
GAATGGACGTTTTATGGGCAGGTTGCCCTATGGTCACCTTGCCTTTAGAG
ACATTAGCTTCACGTGTAGCAGCTTCTCAGATGCATGCGTTAGGAGTTTC
AGAGTTGGTCGCAAAAACGAGAAAAGATTATGAAGACATTGCTATTAAAC
TTGGAACAGACAAAGAATAGTAAGTTTTAATTAAACAGTTTTATTTGTAA
GGCTTTGTCGGTTTTATTAAGTCTCATCTCTTTTGacgaatagacgatat
cggcttaacgaaattctccccgaatgattacccatgattcattgcgcaaa
aaattcagtaagtcaatattacccgtgaatttttttgcgcaatgcatcat
gggcaATCATttggggagaattcggaaagccgatatcgtctattacagCA
TTGTTCTCACATTTTGAGCGATGCACCGTTACACGATTTTCCCAATCAAG
ACTCATTGTCTGCTTAAGTTACCCAATACCTAAttctaattttacttttt
tagctaccgaaaaatcaaactgaaagTATGGGATGGCCGTCTGTTGTCAC
CTTTGTTTAATACTCAACAATATACACTGGActtagaaaagaaattttac
aaaatgtgGCAGAGATATGAAGGAGGTCAATCTCCTGATCATTTAACAGA
TTGAAtaacttgtttttaacttttgtagTAACCATAATTATTATCATAAT
ATTCTCTATTTCTATATTATCTTTTAATTTTATACTTTAATCAGAGattt
aatttctcaaatttcgaggtgttataattattttaaatgatc

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041563	XLOC_041563	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_455	supercontig	scaffold_455:338263..348854 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.7022	20.0127	7.24157	4.42468	83.2608	64.7596	38.7567	42.2228	31.4479	34.099	43.8494	55.4053	76.9309	61.9634	41.8722	38.0533	48.1779	51.0071	52.8322	53.8271	49.9291	64.0697	43.9928	47.8594	38.0155	43.7504	81.7073	88.0637	75.4469	89.8215

Blast

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BLAST of TCONS_00066425 vs. Swiss-Prot (Human)
Match: OGT1 (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3)

HSP 1 Score: 902.894 bits (2332), Expect = 0.000e+0
Identity = 421/525 (80.19%), Postives = 480/525 (91.43%), Query Frame = 3

Query:  414 NAEGSVQTVSTLALAEAAHREYQAGNYESAEKLCMQWWRRETDSTGCLLLLSSIHFQCRRLDQSAQFSQLAIKQNPMLAEAFSNLGNVLKEKGQVKDALANYRHAVKLKPDFIDGYINLAAALVTAGDLEGAVQAYATALNYNPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQIDQNFLDAYINLGNVLKEARIFDRAVTAYLRALTINPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAYCNLANALKEQGKVEESEECYNTALTLCPSHADSLNNLANIKREQGKIEDSIGLYMKALQVLPDFAVGYSNLACVLQEQGRLKEALLYYQEAVRIHPTFADAYSNMGNALKEMQDIQGAIQCYTRAIQINPGFADAHSNLASVYKDSGNIAEAIQSYRTALKLKPEFPDAYCNLAHCLQIICDWNDYDNRMKKLLTIVDDQLGKNRLPSVHPHHTMLYPLSPQQRKAIANRHGNLCLDKV 1988
            + E + + +S   LAE AHREYQAG++E+AE+ CMQ WR+E D+TG LLLLSSIHFQCRRLD+SA FS LAIKQNP+LAEA+SNLGNV KE+GQ+++A+ +YRHA++LKPDFIDGYINLAAALV AGD+EGAVQAY +AL YNP+LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAV +D NFLDAYINLGNVLKEARIFDRAV AYLRAL+++PNHA+VHGNLACVYYEQGLIDLA+DTY+RAIELQP+FPDAYCNLANALKE+G V E+E+CYNTAL LCP+HADSLNNLANIKREQG IE+++ LY KAL+V P+FA  +SNLA VLQ+QG+L+EAL++Y+EA+RI PTFADAYSNMGN LKEMQD+QGA+QCYTRAIQINP FADAHSNLAS++KDSGNI EAI SYRTALKLKP+FPDAYCNLAHCLQI+CDW DYD RMKKL++IV DQL KNRLPSVHPHH+MLYPLS   RKAIA RHGNLCLDK+
Sbjct:   11 STEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKI 535

HSP 2 Score: 405.216 bits (1040), Expect = 5.615e-121
Identity = 198/380 (52.11%), Postives = 246/380 (64.74%), Query Frame = 1

Query: 2764 I*VMWLGYPGTSGATYMDYIITDKETSPLKYTEHYSEKFAYMPHTFFVGDHKQMFPHLIKDVTQEKR---------------------------------------NVNTINSATNTTSVITTKGVEQYIEERIDQRK----------------EEVSGTKDSGERVPETLPQMSRASYGLPDDAFVFCNFNQLYKIDPQTFESWCNILTQVPNSVLWLLRFPQVGETNVKAQAVAHGVAEERIIFSNVAPKEEHVRRGQLGDVCLDTPLCNGHTTGMDVLWAGCPMVTLPLETLASRVAASQMHALGVSELVAKTRKDYEDIAIKLGTDKEYYRKIKLKVWDGRLLSPLFNTQQYTLDLEKKFYKMWQRYEGGQSPDHL 3738
            I  MWLGYPGTSGA +MDYIITD+ETSP +  E YSEK AYMPHTFF+GDH  MFPHL K    + +                                       N ++ N+A N   VI    + + + E I++ +                 +++    +GE VP T+   +R+ YGLP+DA V+CNFNQLYKIDP T + W NIL +VPNSVLWLLRFP VGE N++  A   G+ + RIIFS VAPKEEHVRRGQL DVCLDTPLCNGHTTGMDVLWAG PMVT+P ETLASRVAASQ+  LG  EL+AK R++YEDIA+KLGTD EY +K++ KVW  R+ SPLFNT+QYT++LE+ + +MW+ Y  G  PDH+
Sbjct:  658 IQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPHTFFIGDHANMFPHLKKKAVIDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNADSSNTALNM-PVIPMNTIAEAVIEMINRGQIQITINGFSISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAAGNKPDHM 1036

The following BLAST results are available for this feature:

BLAST of TCONS_00066425 vs. Swiss-Prot (Human)

BLAST of TCONS_00066425 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
OGT1	5.615e-121	80.19	UDP-N-acetylglucosamine--peptide N-acetylglucosami...	[more]

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TCONS_00066425 (transcript) - C. hemisphaerica

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