TCONS_00066399 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066399
Unique NameTCONS_00066399
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1503

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066399 ID=TCONS_00066399|Name=TCONS_00066399|organism=Clytia hemisphaerica|type=transcript|length=1503bp
ATTGTCATGTTAACGAGGAGAGTTTGGAGTGGCTTTGTCCAGGTTGTGCA
CTGGCAGATATTTCGAACAGTCTCTTTGACACCTCAATCTCTTCTTGCAG
TTCCGCTTCAAGTATtgaaaacaatcttccaaagaAAAAAgataaaaaca
tttaaaatgtcTTCGCTGACGGATCAAACTGAATATCTACGAAAAAAGAA
GGAAGAAATCCTTGCCAAAAAGAAAGCACAAGAAGAACAGAAAAAGCAGG
GAGTAAAACCTGAATCTACGGTTTCCTTTGCTAATGATGggagtttttta
gaaaaattcaaatccatacaaaatcaaaccaaaactCCAGACATTAAAAA
AGAACCGCAAAGTACTGCTGCACCGATGGCGTTTGCGAATGATGGAAGTT
TCATGGAGCGTTTCAAAGCTATGCAGGAGAAGGGTATCAAGCAGGAGCCT
GACTACCAAAAGATGGAGAATGTGAAGCCGGCAATCAGTAAAAAGACATC
TAGATTCGATCAACGACCTTCATCTACTTCAACATCCGCCCAAATAATGT
CTTCAATCCAGAGGCCTGCCTCTGTCTTTGAAGATAACGGAGGTATAAGT
TTTATTTAGCACCCACCCAACCGCCCCAAGCCGATGATTACGAAGTAGCA
CGCGAGTTGGCGGAGAAAGTTTACAAAGAAGGAAAACAAGCTGAAATGAT
CGCACGCATCCAAGGAAGAACGAACCCCAAATATAAGTTTTTATTCAACG
ATAAAAGTCCAGTCGCACAGTACTACCAACGAAAACTGGAAAACATGAAA
GAGAGTTCAAGTATCCCCTCCTTATCCACCGCTACAAATTCATCAAGCCA
GCCATCTGCTGTTGCTGGTTCTTCAAGCGCATCCAGTTCAGGTGGATCAT
CTTCGATAAACTTGATGGCAGATTTCGAACGTGCCAAAGCCCTGGTCAAA
GCCAAAGCTGCAGCCATGAAGGAAGGAGGAATTTCTGCTGTTTCGAGCGC
TGCttctgaagaagaagaaagacgaCAAAAAGCTATCGAAGAACAAAAAA
TGATGAACGAAATTTACATGAAAGTGATCACACAACAAATGGCGGCCGCT
TCCGAAGCTAACAAGAAACGGAAAAGGAAACGTGATCCGGACAAACCGAA
ATACGAATACGACTCGGATGAAGATATAGAAGGGGGAACTTGGGAACACA
AGAAAAGAACTCTTGAAATGCAGAAGACCGCTGGTAAGCTTTTCCAGGAA
TACTGTCTAGCCAGTAGAACCTTCTTTTCGCTAATATCGAGGCCAAAGGT
AGAATTTCACTAAAAGAAAAGGTCCAATCGCNTTAAATCTTTTCCAGGAA
TACTGTCTAGCCAGTAGAACCTTCTTTTCGCTAATATCGAGGCCAAAGGT
AGAATTTCACTAAAAGaaaaggtccaatctcaaaattttaaatttcaaaa
caaaagaaatatcaaGTTTTCTCAGAGTCCAATTTAGAGTATTTATTTTT
TGC
Run BLAST on NCBI

transcript from alignment at scaffold_455:142566..158211+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066399 ID=TCONS_00066399|Name=TCONS_00066399|organism=Clytia hemisphaerica|type=transcript|length=15646bp|location=Sequence derived from alignment at scaffold_455:142566..158211+ (Clytia hemisphaerica)
ATTGTCATGTTAACGAGGAGAGTTTGGAGTGGCTTTGTCCAGGTTGTGCA CTGGCAGATATTTCGAACAGTCTCTTTGACACCTCAATCTCTTCTTGCAG TTCCGCTTCAAGTATtgaaaacaatcttccaaagaAAAAAGTCAGTAAGC TTCGAATTGTTATCTGTAACTTTCAAAGTATTTACAACAAAAATGAAGAA CTTTCAAATTATCTCATTACAAATGATATAGACATTTTGATTGGGACTGA AACACACCTATCTTGTAACATTCTTAACTCTGAGCTTATCCCAAAAACAG GCTATCAAATTGTTCATCGGTGTGACCGTAATGATGGGTACGGAGGCGTT ATCATCATCGCAAAGGAATCTTTGATCACTGAACCCATAAAGGCTTCTAA CAGTCATCAAATAATCGCTGTAAAAGTGGAGACATTCCAGAAGCCCATAA TCATCTCATCTTGCTATCGATCACCAAACAGCTCAATTCAGGAAAACAAT GACCTTGTCCAATCAATAAACAACCTgtccaaaaaattcaaatcaaaccC TCAGTTTATCGGAGGAGATTTCAATCTACCAGATGTTGATTGGGAGTCAT ACACAATTACTGGATCTCAATACCCTCGAGCACTGAATGAGCAATATCTT GAGGCATTTGACATAAACAGTCTTTCCCAAGCTGTCAATTTTCCAACCAG ACAAAAATCTATCTTAGACCTACTCATTACCAACAGACCGTCCTTCATCG AAAGCTGCAGACCAACACCAGGTTTTGGAGATCACCAGACAGCTGTTCTT GCTGACGTTTATTGCCACCCTAAAAGACAGCGACCTGTACAACGAAAAAT CTACCTCTGGAACCGTGCTAACTTCGACCAGATGAAGCAAGATGTAAGAC AAGCGTCAGACCAATTCTTGGAAAACGAAACAACCGATACACCGATCAAT AACTTGTGGTTAAAATTCAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTCAATTCAGGAAAACAATGACCTTGTCCAA TCAATAAACAACCTgtccaaaaaattcaaatcaaaccCTCAGTTTATCGG AGGAGATTTCAATCTACCAGATGTTGATTGGGAGTCATACACAATTACTG GATCTCAATACCCTCAAGCACTGAATGAGCAATATCTTGAGGCATTTGAC ATAAACAGTCTTTCCCAAGCTGTCAATTCTCCAACCAGACAAAAATCTAT CTTAGACCTACTCATTACCAACAGACCGTCCTTCATCAAAAGCTGCAGAC CAACACCAGGTTTTGGAGATCACCAGACAGCTGTTCTTGCTGACGTTTAT TGCCACCCTAAAAGACAGCGACCTGTACAACGAAAAATCTACCTCTGGAA CCGTGCTAACTTCGACCAGATGAAGCAAGATGTAAGACAAGCGTCAGACC AATTCTTGGAAAACGAAACAACCGATACACCGATCAATAACTTGTGGTTA aaattcaaaaatatcattACCACTGCTCAAGAAAGCAATGTACCGTGCAA AAATTCAACTAAACGATACAACCAACGGTGGTTTAACCAATCATGTAGAC GTGCCGTTCGAAAAAAGCAAAGATTATATCATAGATACAAACGCACAAAG CAATCAGCTGACTGGAACAAATACATAAAAGCTGCAAAGAAAGCAAGATT GACTTGTAAACAAACTTGTGATAAATTTATCAACgacaattttttatcag aacacAAATCAAATCCGAAAAAAGTTCTACAGTTACATCAAATCTAAAAA GCAGGATAATATCGGAATCACTTCTTTGCTCTCAAATGGAAATACTTTTA CTGATGACACTCAAATTGCAAAAATCCTCAATAATCAATTTCTGAGTGTT TTTTCAGAAGATGACGGNCCAGAGGGAAAAGTAACATCCGGAATCCCACA AGGATCGGTACTGGGACCCCTGCTGTTTAGTAGTATAGTATTGTTTAGTA TATATAAATGACATATCACTAGCAGTCACATCCTCAGAGATAAGTCTTTT TGCTGATGACGCTCTACTTTACAAATCcatcaaatcaatcaaagatGCCA GAGATCTGCAAAATGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAAA TTCCTCAGTAATCTAAGTTCTTTTTTCTGCAATATTCAATTACCTCTTAA TCCAAAGTGGTtgcctttttattaaattctagattttattatatttagac agattttattttattaccattttattttacattcaggAAATTGTACGTAT GTACCCTCTGAATTATTGAATAAAAGTAGAAGAAGAAGTACCGAGCCTAC CgatgcgtcggcagggtcctgtttTTTAGCTATATCTAACATACATCGTG TACATGAAATTTACACCCTTGAAACTCTTGAGATTCAGAAACCCGCTGGA AGGAATTGGGCCAGTTCCAGAATACACCTTTCCAGTAATTAAAACTCCCC GGAAATAATAATGTTACTACTCCACccattgtgtataaaattgtttgcaG TTTGGGGCAAGATAAACGAATCTGTCTTTGTCTGGGAGCtgaagggaaag tgggttttcagctttTAACTTGTGATAGCGatctttttttttggcaaaaa atttgtTCAGGGTTAGaaatagcctggagatccatgctatgatttcttat tctatatactgatcgTACGCGCGTTTGGTTTAGCAACGCGAACGCAAACT Accgatgtctaaacttttcaatatatctccagaactaacagactttttga aattctgtaaaaaggttcaagttcctgaatagttttactatttTCTGTGA AAAGatcataaccatcagtgaaatactcgttcatctatttaagattgaag acaaaaattatcgaagaaaaataaaccttgagcacaaatgcttttttaaa cacttttttacaccgaaaaacaaataacctTCCCCCCctcaaacattgaa gaagcctctactaattaaagtaaatgagataagataagataaaaccttaa aatcaaccagaatttacaaccttttgtccaaagcaaaagacgtgcttttc ccGTCGCCATCTTGTAttagaatgagaattattttcggttccagttcaca tggaaattttttcatccaatcagattgcgcaatttcacttttgctttctc tagtccaataagactgcaggatttgagtcatgtgacatctctattgaaaa atagagaaaaaacccgcacaaaataaaatagaaatacaggggggaCACAC Tagtggctacaggaactgaaagcaaacaactaaggccaatatttttgggt tttctgaaggacaaaaggtataggaagctttactgaaggagggataaggc tggaactatctatttaaaagatatggacaaaaaatggCACTAAatggcac ttttttgggtgataattaagattttacttagaaactttaattctcttacc cccgtcctgcccccccccctgatatgagcaaggaaATCATGTTGAAAATt actactgaaaatttcagatcaaaacaaacaaaaaaagctggaaaaagctg gtttttgactgtttctgatcctaaggtgcttatttttatcatttttccag gataaaaacatttaaaatgtcTTCGCTGACGGATCAAACTGAATATCTAC GAAAAAAGAAGGAAGAAATCCTTGCCAAAAAGAAAGCACAAGAAGAACAG AAAAAGCAGGGAGTAAAACCTGAATCTACGGTTTCCTTTGCTAATGATGg gagttttttagaaaaattcaaatccatacaaaatcaaaccaaaactCCAG ACATTAAAAAAGAACCGCAAAGTACTGCTGCACCGATGGCGTTTGCGAAT GATGGAAGTTTCATGGAGCGTTTCAAAGCTATGCAGGAGAAGGGTATCAA GCAGGAGCCTGACTACCAAAAGATGGAGAATGTGAAGCCGGCAATCAGTA AAAAGACATCTAGATTCGATCAACGACCTTCATCTACTTCAACATCCGCC CAAATAATGTCTTCAATCCAGAGGCCTGCCTCTGTCTTTGAAGATAACGG TATGTccagatttttctttatttgttgttgtttcaGGCTAATATGTGAGA TACaagatgttgtttttttttgctttgataACGATTTTAGATAAATTCAC TCTTACTCTTCTAGATACAAAAGCTTTATCTTTGGTATTTCAatcacatt ttattttaactttccttttactcttttgtgcttagcTGTTATGTGAAGCA GTTTTTGCAATCTTCAAATGAAAGTGAATAAGATTATGAGGGGGGGGGCT AAATCCAAGTAATTTTGCACTTTTGATGAAGGCTTTGAGNCAAGAttatg agggggggggggctaaatcCAAGTAATTTTGCACTTTTGATGAAGGCTTT GAGGAAGAACTTTTAATGATGGGTCcatattttgaatgttttcgaTTGCT TGTTCCGTCCTCAAATTGCATTTTTGTTGAAACCCAATTAGGCACAAAAG AGTAATCATGCATTTCTTCCCATTCTTCTTTTTTGTACTTGATGAAAAGG AGGTATAAGTTTTATTTAGCACCCACCCAACCGCCCCAAGCCGATGATTA CGAAGTAGCACGCGAGTTGGCGGAGAAAGTTTACAAAGAAGGAAAACAAG CTGAAATGATCGCACGCATCCAAGGAAGAACGAACCCCAAATATAAGTAT GACTTTTTTGTCTAGTGTATATTTATGTAGTTGTGTGAAAGTATTTTTCT GACTGGACAAacatttttggcttttttattTACCTTGCTCCATGATTCCA TACATCTCTGATTTAATTTAAGTTAGTTTTATTCTattaaattttttcga aaagcATTTTTGGGCCAATTCCCCGTATACTTTACATACAGCAATGTcac ttttcttttactttttcttccATCATTAGGTTTTTATTCAACGATAAAAG TCCAGTCGCACAGTACTACCAACGACAACTGGAAAACATGAAAGAGAGTT CGAGCATCCCCTCCTTATCCACCGCTACAAATTCATCAAGCCAGCCATCT GCTGTTGCTGGTTCTTCAAGTAATTTTCACTATTGCTTTTATGGTTATGG TTTAAAAGGGATAATcaaatggtttgagatatttaccCTGCATAAACCTT CAGTGGTCTTCAGTAAAACCtcgaagtatttttttttaaaactattttcc gaagtcgagatatcacaatctgaaatttctaaaaatgggtTCTTACCTGT TCTTACGTCAAAATTGTTTTCTTGccgctaaaaatcaaaaacttgtaact tgaaTATCTCGACTTTGAAAACTAGTTAGGCAAAGATATTTAGAGTTTTT TCTCGCGACAATAGAATGAATCCAAAtaccaaatatctcaaacctcTGAT TGTCCCTTTAAGTACCATATTTCTATTTGAATTAACAATTANATCAAAAC CCAAGACCTAAATGtagggggtagaaactatgatGATCTATAGTATCTCT GTTTTAAATGGCTGGTGAACTTTTTTTATGCATTTTCCCCAATTGGTAAA ATTTATCTGAAACAAGAATGCTTGTGACTTTTGATAGTCCGatttaattg caaaaaatgtttttgcttcttttagaaaatcaaaaacgctatatttgaat gtattttccattgaaaacttcgcgatttttagcggtttaatttgcgattg caaagaTTGAGCTTTTTTTATACTTATGCTACAACGCAAGgtcaagaaaa aagttaaatttcaaggcaaacggaaaagtcattcggaagatatgggacct gAAATACCCATTGGTTAGCATTTTTCTGTGAAAcatcaaatctccaaatt ttaataaaaacgggggtagtgatgataaaacagtttttcaatcatatatt ataacacattttacgatctttttacgataatgacctcatagccaaactgt gcatagtgttttgggaattagcttacttaaaaataacaaagaacAAATAA GTTCAATGTGTCTTatcgtttcaataaaaacaatcaaatttgttttgaaa tgatacCAATAACGCCAATGCAGCAACACTGTCttaacactttccaactt ttaattggactgttcaaaaaagacaacataacccccgtttttagtaaagA TTTAGAGATTTGATGTTTCACAGAAAAATGCTACCAatgggtatttcggg tcccatatcttccgaaggacttttttgtttgccttgaaattgaACAACCT TCTTTGCCTAAGGCTGAACTACCACTAgtttaaaaatgaacgttatagca taaaaagaaaaaaagctcaatttttgcaatcgcaaatttaaccgctaaaa atcgggaatttttcaacaaaaaatacattcaaatatagcgcttttgattc tctaaaacaagcaaaaaaaaattttggaattatatttcacTATTAAAATT TACAGActttcttgtttccactgccaattatatctggacagactttagtg tgTATTTGTGTAGTTAAACCCAAGGTGTGAAATTCCATTAGTATTTTTCT GAGTGGAGAAagatttttggcttttttggacctaccccggtgggctgtag gtcctataaattaacctctgttcgttcgttcgtccgttcgtccgttcgtc cgttcgtccgttcgttactagctNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNtttttctgattttttgcagaaagatgc gtatttgcaatggtcaaaacatggccgagttcgatttttgagaaaaaatt ttttccggttgaaaatgccggaaatcgccgtctttgcagattttcattat attttttccttgtatttcttcacacaaaaacactattgataacaatgctc accatcaagcatgattcaattgtcaataaaactgatttttgcgaccagaa ctttctattaatttttccctacaaccctNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatgcatttt cgctaaacgatatattttctgactgatttttttctcctcgcattgctatc taactttcatcatcaggtaggtccattcagcatctagcttgttatttACC TTACTCCATGATTCCATACATATCTATGAAGAGccattttctgagaaaaa taggcaaaaatgggcAAGGTCAGGAAGTGATATTcctcatttttggatat tttgttcagattaatgaaaaaaaacatcccctgaaaattttttcgaaaaa ttcctTCCGGTTGGTGAGATATGGCCCATTgaaatttcgatctttttggC TATTTGGGTCTGCAAAATGGAAGAGCTTCTTtcatggctggaaccccccc ccctggcctgAGGTCGAGCAGCAATGGGTACCTGATTTTAGgctgtggct aggggggactaacccctaaattttttcagatggacctgggggctagattc tatgtttggtgatttttttctgaacttgtttttctttcatcatAAACTGC ACTATGCAGAGTTGCTACGTCTGCCTGAAATGTCTGGAATTAAGTTAAAG TCTGGAAATGTCTGGAAAGTCTGAAAAGAGTCTGGAATTGGCATACTTGT CTAAAAAAGTCTGGAATTGACATTCATGTCTGGAAAAAAATATGGAATTT GAAGGAAATAGTCCTGAACAAAGTCAAGTAAACTTTCTGGAAATAGGAAA TTTTTATCCTGGCATTtgaaattcccaaaaatttaacCTTTAGTCATGTT TATTCTGTAATTTCTCATTCTGTTGTATTCATCAACCTGGCCTTTCAAAT GACCGTTAAGGAAAAACTAAAAACCTTCCTAATGGATAAAATGCCTGGAA AATATTGcgtattttgctaaaatttctgGAAAATCTTTGACATTTTCAGG CAACAAATCTGAAAAATATGGCTTTTGAGACTAAAAGTCTGGAATTTCCA ACTTGGTAAACCTGTAGCAACCCTTCTATGGAATGTCTTCTGTGTTTCTG AGAAAACTGTGTGtgcaataagctaaactaactgttgtatttgtttgatt gtttgaaaaggattttcgaaaaaatatgtcattggcttaggggtcaccga aaatatttggcaaccaggggttacctaaatcttaggggtcacctgaattc ctagggggcacctaaaacctgctgccaagccatgattctttgaaatgatt tttaaCCCATTTTGAGCATAAAGAGGTACCCCCATTTCTTCATTTCTTGG AAATATGGGATAAGTTctacacaaaaaataaaaaacgaggTTCTGAATAT TCCTCAGTGTCTAGAAATCATAGGCCAAAATCACACATTCGCCAAATTCC TGCCCTTTTTGAGATCAAATATCTTACTTGGGCCTCACTTCTACATGTAC AAGTTAAGATTCTCTGATAAACAGCTGAACTTATTTTCATTTCCACAATT TCATGGGCCAACAATGGGTGTGGCCTCTGCcgccattttaaaattttaag tcCGAAATGGTCCCACTTTCGCGGTCTATAATGGCTGCGGCCCTCActtt gacaaacttttttttcaaagaattagGTGCTATTGCCCTTCCTCTTTCCA TATCTGAAAAGAAATTCATGGGCTCTAGTCTCTTTGAGTCAGAATAAGCC CTAGAAGTGAGTCTAGTCTACTAAGATTTCATGCCTGAAAACTCCTTAGC AACGGGTTGTTTACCCGTAGCAACGGCTCTTTCAATGCTTAGATGAAAGT GCTGTGATGTTTCTGTTTAGTTGGAAATGGCCAGACTTAATTCTGAATCT TAAATAGGTACAATGCAAGGAAAAATAGCAcctattaaccctttaagtgc caatatGTCGTACATATCAGACACGGGCTATGTCGGacgccctcctgtaa tgcccagtttgagttagaaatcgtcaaaATCGTCCAAAAATGAGGAAAAC TTAAAGACATCACTTCCTCACTTTGCCCGGATCTCTCAGAAAATGGCTCT TTAATATAAGTTAATTTTACTctatcaaattttttcgaaaatcattttTG GGCCAATGCGATAAATTCCCATATACTTTATACAGCattgtcactttttt ttattttttcgttcatcACCAGGTTTTTATTCAACGATAAAAGTCCAGTC GCACAGTACTACCAACGAAAACTGGAAAACATGAAAGAGAGTTCAAGTAT CCCCTCCTTATCCACCGCTACAAATTCATCAAGCCAGCCATCTGCTGTTG CTGGTTCTTCAAGTAATTTTCACTATTGTTTTTATGGTTATGGTTTAAAA GGGATAGTcaaatggtttgagatatttaccCTGCATAAACCCTCAGTGGT TTTCAGTAAAACCTCGAACTATTTTCCGAAGTCGagatatcacaatttga aatttctaaaaatgggttcttacatCAAAATTCACTTGTTTTCTTAGCTT TCTCTCGCAACAATAGAATGAATCCAAAtaccaaatatctcaaacctcTG ATTGTCCCTTTAAGTACCACATTTCTATTTGAATTAACAATTAACATCTT TCCCAgaactttcttcttttcttcttttctatGAGGAAAAAATTGAGGAT TGTCATCTTTATTATTGATAaaggctacttagactacacaatatatatTG ACcaacaatatttgacaatatctTTTTCGGACCGTATTGTACGAAGTAAT TAACAGGtgttctattataaaaaggaattttctttctgtaaacaatccct cTAAGttgttggaaaattgcaaatcaagctgacaatatattgcggacacc ttttcaatatattgtcggCACTctgcaatatatcatcaatatattgcctg acaatatgttgtgtagtgtatgtaccTTTAGTTTAAGCTCGATAATTAAC TCTGTTAAAAGAATGCTTCATTCATCAATATCAATGCACAGATCCTTCAA TTCTTCCCCTCAGGATGACCCTTATCATCTGTTCCCCAGATAATTGCCAG TGTATTTTATGTACAGTCAACTTACTCTAGTTCTAACTGCTATTACCTta ctggaactaattttcgtgggaGTTAATATTCGCGGTCGAAAactaaaatc agaaaaattgcattgcgcgggttttaattttcgcgtttttgccgtttttt ggacaaatttctttcattttcctagggatttttcaaatgtttgatgaaat tggaaaaaattgtattgtatcaaaaacgctaaaattaattcccgcgaaaa ttagttccaataaggtattcagaatctttctataattcgaacaagttgGT CTCCCCCAGCTGTAAAGTGATTTAAAtgctctctgtaattcgaagaaaat ttttcccatGAAAACGTTAGATATCTAAGTTGGACACTTTGCAAACATTT ACTTACACTTTTAGGTGTATTGATCAAAATTCAGCTTTGAAATCATTTCG CTATTCCTTTTGCTTTCTACCTTAGGCGCATCCAGTTCAGGTGGATCATC TTCGATAAACTTGATGGCAGATTTCGAACGTGCCAAAGCCCTGGTCAAAG CCAAAGCTGCAGCCATGAAGGAAGGAGGAATTTCTGCTGTTTCGAGCGCT GCttctgaagaagaagaaagacgaCAAAAAGCTATCGAAGAACAAAAAAT GGTATGAGTGAGATAAAATAGACTCCCGCGCAGAACACTTATTCGCGTAT TCGAAATAGTTTATAATTCCCGTCTTAGGCTAAATTCTCTCTCAGTTATT CCAAATTTTTATATACGGTAGTTAGTAAAAGAACGCAAAATTTTCAATGA CCTTTTATCAATCAAAAGGACAATGTTACTACAATCAAAGCACTTTTTGT CAACTCCCGACattaaagaaattgaaaattcgatggaaaaaaaaaagctt ttcagtCATTCGAGCccaattattttctttttagtcGTTTGTCATaatca tagtccgtataaaaaactctGGTCTGGAAGTTTTAACTTTGTTATCTTTT TCCTATGTTAatttcaaaagatgaaaatggaTTTGCTGAGTTTTCGATCA CGTTACCCATcattcctcttgggattggtttaagatttaatcacatggtC AAAAAGCGAGCAAAACTGATTTCTCAAACGCAAATTCAAATaagaaacaa tgaaaagaaagaaaaggcttccagaccggagtttttttatacggactatg tcATCATCTACTTTGCCTGAACGTCCCTCCTACCCTGCTAAATATCTTTG AAACGAAATTCTAAGTGATGTATCTGCTATTCTACGAAAAGTTTCTTTGG GTAACCCTTTGTTTGACTTTGAAATATAACTCGTTTGCTGTTTTTGGTTG AATAATTTGGGACTGAGTATATTGGGCTGATTTTAGTGTCTTGTAAGCTG AAGTTTCAGTATTTTTCTGGGAAAGAAAAGACAATGTCGATAAAGTGGAA ATAATCATTCACTTGTAATTTATACCGGTAACTAATTTGTcaatatcaaa tcaatatcaattgaccttttcataaattacgccaCGACCAActcttacct cgttttcaaaatattgccaTGGTAATCGATTCCCGGAGGAGTTCactcta tttataaaagtaacaCTTGAAAGCTCTagggatttaatcaccttggtaat ggtttcaaaacgaggcagtcgttgcactcaaaataattataGAAAGTCTT CGCCGCTGTTTTGTTGGGACgtgatggagtttttacaagctcttatttga tttggttggtcgttaacgagtcatttttattacttcgaatgaccaattat taaagtatctcataaaaactcaatctCATCTGGTTTCGTTTGTAGATGAA CGAAATTTACATGAAAGTGATCACACAACAAATGGCGGCCGCTTCCGAAG CTAACAAGAAACGGAAAAGGAAACGTGATCCGGACAAACCGAAATACGAA TACGACTCGGATGAAGATATAGAAGGGGGAACTTGGGAACACAAGAAAAG AACTCTTGAAATGCAGAAGACCGCTGGTAAGCTTTTCCAGGAATACTGTC TAGCCAGTAGAACCTTCTTTTCGCTAATATCGAGGCCAAAGGTAGAATTT CACTAAAAGAAAAGGTCCAATCGCNTTAAATCTTTTCCAGGAATACTGTC TAGCCAGTAGAACCTTCTTTTCGCTAATATCGAGGCCAAAGGTAGAATTT CACTAAAAGaaaaggtccaatctcaaaattttaaatttcaaaacaaaaga aatatcaaGTTTTCTCAGAGTCCAATTTAGAGTATTTATTTTTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041558XLOC_041558Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066399-exon-scaffold_455-1491911889:142566..142705TCONS_00066399-exon-scaffold_455-1491911889:142566..142705Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1510915933:142566..142705TCONS_00066399-exon-scaffold_455-1510915933:142566..142705Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1575043694:142566..142705TCONS_00066399-exon-scaffold_455-1575043694:142566..142705Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1491911889:147916..148364TCONS_00066399-exon-scaffold_455-1491911889:147916..148364Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1510915933:147916..148364TCONS_00066399-exon-scaffold_455-1510915933:147916..148364Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1575043694:147916..148364TCONS_00066399-exon-scaffold_455-1575043694:147916..148364Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1491911889:148865..149011TCONS_00066399-exon-scaffold_455-1491911889:148865..149011Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1510915933:148865..149011TCONS_00066399-exon-scaffold_455-1510915933:148865..149011Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1575043694:148865..149011TCONS_00066399-exon-scaffold_455-1575043694:148865..149011Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1491911889:155038..155177TCONS_00066399-exon-scaffold_455-1491911889:155038..155177Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1510915933:155038..155177TCONS_00066399-exon-scaffold_455-1510915933:155038..155177Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1575043694:155038..155177TCONS_00066399-exon-scaffold_455-1575043694:155038..155177Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1491911889:156391..156566TCONS_00066399-exon-scaffold_455-1491911889:156391..156566Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1510915933:156391..156566TCONS_00066399-exon-scaffold_455-1510915933:156391..156566Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1575043694:156391..156566TCONS_00066399-exon-scaffold_455-1575043694:156391..156566Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1491911889:157761..158211TCONS_00066399-exon-scaffold_455-1491911889:157761..158211Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1510915933:157761..158211TCONS_00066399-exon-scaffold_455-1510915933:157761..158211Clytia hemisphaericaexon
TCONS_00066399-exon-scaffold_455-1575043694:157761..158211TCONS_00066399-exon-scaffold_455-1575043694:157761..158211Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:142566..158211 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 7.56863 8.20555 6.60474 10.5332 4.16153 3.30956 3.03905 4.02951 2.13619 5.14053 0 0 0 0 0 0 0 0 0 0 10.0984 13.8698 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066399 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top