TCONS_00066393 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066393
Unique NameTCONS_00066393
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066393 ID=TCONS_00066393|Name=TCONS_00066393|organism=Clytia hemisphaerica|type=transcript|length=1559bp
gcaAAACCTGGGAAACCGGTGGAGCGATCTTTTTCAGTGtaactaaaaag
aaaatttacaaaaacaaacaagacAATACAAACAACAAGAAGCATTTGGT
TTGAAACTGACAAGGACATAAGTGGGCAAACCAAGGAATGTGTAGATACC
CTTGAGGTTTCGGCAAATAACCAAGGACTGGCTGTACTATGATTGGATCC
ACGTGCAGCTGAGCAGgataaaaacatttaaaatgtcTTCGCTGACGGAT
CAAACTGAATATCTACGAAAAAAGAAGGAAGAAATCCTTGCCAAAAAGAA
AGCACAAGAAGAACAGAAAAAGCAGGGAGTAAAACCTGAATCTACGGTTT
CCTTTGCTAATGATGggagttttttagaaaaattcaaatccatacaaaat
caaaccaaaactCCAGACATTAAAAAAGAACCGCAAAGTACTGCTGCACC
GATGGCGTTTGCGAATGATGGAAGTTTCATGGAGCGTTTCAAAGCTATGC
AGGAGAAGGGTATCAAGCAGGAGCCTGACTACCAAAAGATGGAGAATGTG
AAGCCGGCAATCAGTAAAAAGACATCTAGATTCGATCAACGACCTTCATC
TACTTCAACATCCGCCCAAATAATGTCTTCAATCCAGAGGCCTGCCTCTG
TCTTTGAAGATAACGCACCCACCCAACCGCCCCAAGCCGATGATTACGAA
GTAGCACGCGAGTTGGCGGAGAAAGTTTACAAAGAAGGAAAACAAGCTGA
AATGATCGCACGCATCCAAGGAAGAACGAACCCCAAATATAAGTTTTTAT
TCAACGATAAAAGTCCAGTCGCACAGTACTACCAACGAAAACTGGAAAAC
ATGAAAGAGAGTTCAAGTATCCCCTCCTTATCCACCGCTACAAATTCATC
AAGCCAGCCATCTGCTGTTGCTGGTTCTTCAAGCGCATCCAGTTCAGGTG
GATCATCTTCGATAAACTTGATGGCAGATTTCGAACGTGCCAAAGCCCTG
GTCAAAGCCAAAGCTGCAGCCATGAAGGAAGGAGGAATTTCTGCTGTTTC
GAGCGCTGCttctgaagaagaagaaagacgaCAAAAAGCTATCGAAGAAC
AAAAAATGATGAACGAAATTTACATGAAAGTGATCACACAACAAATGGCG
GCCGCTTCCGAAGCTAACAAGAAACGGAAAAGGAAACGTGATCCGGACAA
ACCGAAATACGAATACGACTCGGATGAAGATATAGAAGGGGGAACTTGGG
AACACAAGAAAAGAACTCTTGAAATGCAGAAGACCGCTGGTAAGCTTTTC
CAGGAATACTGTCTAGCCAGTAGAACCTTCTTTTCGCTAATATCGAGGCC
AAAGGTAGAATTTCACTAAAAGAAAAGGTCCAATCGCNTTAAATCTTTTC
CAGGAATACTGTCTAGCCAGTAGAACCTTCTTTTCGCTAATATCGAGGCC
AAAGGTAGAATTTCACTAAAAGaaaaggtccaatctcaaaattttaaatt
tcaaaacaaaagaaatatcaaGTTTTCTCAGAGTCCAATTTAGAGTATTT
ATTTTTTGC
Run BLAST on NCBI

transcript from alignment at scaffold_455:141939..158211+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066393 ID=TCONS_00066393|Name=TCONS_00066393|organism=Clytia hemisphaerica|type=transcript|length=16273bp|location=Sequence derived from alignment at scaffold_455:141939..158211+ (Clytia hemisphaerica)
gcaAAACCTGGGAAACCGGTGGAGCGATCTTTTTCAGTGtaactaaaaag
aaaatttacaaaaacaaacaagacAATACAAACAACAAGAAGCATTTGGT
TTGAAACTGACAAGGACATAAGTGGGCAAACCAAGGAATGTGTAGATACC
CTTGAGGTTTCGGCAAATAACCAAGGACTGGCTGTACTATGATTGGATCC
ACGTGCAGCTGAGCAGGTACCTCATATTCTTCTCTGACTCGATTCATGAT
GAACCTGTTTAAAATCTTATTCTTGGTTTTCATCTGGCAACTCACCAGAG
AAGAGGTTTCATTAAACCAAGGGAATTCTCTACTCTGCTGCAAAACCCTG
TCTAAGAATGAAATCTCCTTGTTCTCCTTTGCCCTTTCTCATCAGGAACA
CCGAAACTATCCATACAATCCATACAAAATGAGCACAAGTGCAACACTTC
AACAACTACCATTGATAATCAGTGGATCGGTCGAATTAAACCCTGGACCA
GCTTCGAAAGTGAAATATCCATGTGGCGAATATCAAAAAGCTGTCACTAC
AGGTGCTTCCATCGCTTGTGACCTTTGTAATCAATGGTTTCACCGCAAAT
GTTCATCAATGAGCGACCAAATTTACAATTGTCATGTTAACGAGGAGAGT
TTGGAGTGGCTTTGTCCAGGTTGTGCACTGGCAGATATTTCGAACAGTCT
CTTTGACACCTCAATCTCTTCTTGCAGTTCCGCTTCAAGTATtgaaaaca
atcttccaaagaAAAAAGTCAGTAAGCTTCGAATTGTTATCTGTAACTTT
CAAAGTATTTACAACAAAAATGAAGAACTTTCAAATTATCTCATTACAAA
TGATATAGACATTTTGATTGGGACTGAAACACACCTATCTTGTAACATTC
TTAACTCTGAGCTTATCCCAAAAACAGGCTATCAAATTGTTCATCGGTGT
GACCGTAATGATGGGTACGGAGGCGTTATCATCATCGCAAAGGAATCTTT
GATCACTGAACCCATAAAGGCTTCTAACAGTCATCAAATAATCGCTGTAA
AAGTGGAGACATTCCAGAAGCCCATAATCATCTCATCTTGCTATCGATCA
CCAAACAGCTCAATTCAGGAAAACAATGACCTTGTCCAATCAATAAACAA
CCTgtccaaaaaattcaaatcaaaccCTCAGTTTATCGGAGGAGATTTCA
ATCTACCAGATGTTGATTGGGAGTCATACACAATTACTGGATCTCAATAC
CCTCGAGCACTGAATGAGCAATATCTTGAGGCATTTGACATAAACAGTCT
TTCCCAAGCTGTCAATTTTCCAACCAGACAAAAATCTATCTTAGACCTAC
TCATTACCAACAGACCGTCCTTCATCGAAAGCTGCAGACCAACACCAGGT
TTTGGAGATCACCAGACAGCTGTTCTTGCTGACGTTTATTGCCACCCTAA
AAGACAGCGACCTGTACAACGAAAAATCTACCTCTGGAACCGTGCTAACT
TCGACCAGATGAAGCAAGATGTAAGACAAGCGTCAGACCAATTCTTGGAA
AACGAAACAACCGATACACCGATCAATAACTTGTGGTTAAAATTCAAAAA
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ATTCAGGAAAACAATGACCTTGTCCAATCAATAAACAACCTgtccaaaaa
attcaaatcaaaccCTCAGTTTATCGGAGGAGATTTCAATCTACCAGATG
TTGATTGGGAGTCATACACAATTACTGGATCTCAATACCCTCAAGCACTG
AATGAGCAATATCTTGAGGCATTTGACATAAACAGTCTTTCCCAAGCTGT
CAATTCTCCAACCAGACAAAAATCTATCTTAGACCTACTCATTACCAACA
GACCGTCCTTCATCAAAAGCTGCAGACCAACACCAGGTTTTGGAGATCAC
CAGACAGCTGTTCTTGCTGACGTTTATTGCCACCCTAAAAGACAGCGACC
TGTACAACGAAAAATCTACCTCTGGAACCGTGCTAACTTCGACCAGATGA
AGCAAGATGTAAGACAAGCGTCAGACCAATTCTTGGAAAACGAAACAACC
GATACACCGATCAATAACTTGTGGTTAaaattcaaaaatatcattACCAC
TGCTCAAGAAAGCAATGTACCGTGCAAAAATTCAACTAAACGATACAACC
AACGGTGGTTTAACCAATCATGTAGACGTGCCGTTCGAAAAAAGCAAAGA
TTATATCATAGATACAAACGCACAAAGCAATCAGCTGACTGGAACAAATA
CATAAAAGCTGCAAAGAAAGCAAGATTGACTTGTAAACAAACTTGTGATA
AATTTATCAACgacaattttttatcagaacacAAATCAAATCCGAAAAAA
GTTCTACAGTTACATCAAATCTAAAAAGCAGGATAATATCGGAATCACTT
CTTTGCTCTCAAATGGAAATACTTTTACTGATGACACTCAAATTGCAAAA
ATCCTCAATAATCAATTTCTGAGTGTTTTTTCAGAAGATGACGGNCCAGA
GGGAAAAGTAACATCCGGAATCCCACAAGGATCGGTACTGGGACCCCTGC
TGTTTAGTAGTATAGTATTGTTTAGTATATATAAATGACATATCACTAGC
AGTCACATCCTCAGAGATAAGTCTTTTTGCTGATGACGCTCTACTTTACA
AATCcatcaaatcaatcaaagatGCCAGAGATCTGCAAAATGACTNNNNN
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NNNNNNNNNNNNNNNNNNNNAATTAAATTCCTCAGTAATCTAAGTTCTTT
TTTCTGCAATATTCAATTACCTCTTAATCCAAAGTGGTtgcctttttatt
aaattctagattttattatatttagacagattttattttattaccatttt
attttacattcaggAAATTGTACGTATGTACCCTCTGAATTATTGAATAA
AAGTAGAAGAAGAAGTACCGAGCCTACCgatgcgtcggcagggtcctgtt
tTTTAGCTATATCTAACATACATCGTGTACATGAAATTTACACCCTTGAA
ACTCTTGAGATTCAGAAACCCGCTGGAAGGAATTGGGCCAGTTCCAGAAT
ACACCTTTCCAGTAATTAAAACTCCCCGGAAATAATAATGTTACTACTCC
ACccattgtgtataaaattgtttgcaGTTTGGGGCAAGATAAACGAATCT
GTCTTTGTCTGGGAGCtgaagggaaagtgggttttcagctttTAACTTGT
GATAGCGatctttttttttggcaaaaaatttgtTCAGGGTTAGaaatagc
ctggagatccatgctatgatttcttattctatatactgatcgTACGCGCG
TTTGGTTTAGCAACGCGAACGCAAACTAccgatgtctaaacttttcaata
tatctccagaactaacagactttttgaaattctgtaaaaaggttcaagtt
cctgaatagttttactatttTCTGTGAAAAGatcataaccatcagtgaaa
tactcgttcatctatttaagattgaagacaaaaattatcgaagaaaaata
aaccttgagcacaaatgcttttttaaacacttttttacaccgaaaaacaa
ataacctTCCCCCCctcaaacattgaagaagcctctactaattaaagtaa
atgagataagataagataaaaccttaaaatcaaccagaatttacaacctt
ttgtccaaagcaaaagacgtgcttttcccGTCGCCATCTTGTAttagaat
gagaattattttcggttccagttcacatggaaattttttcatccaatcag
attgcgcaatttcacttttgctttctctagtccaataagactgcaggatt
tgagtcatgtgacatctctattgaaaaatagagaaaaaacccgcacaaaa
taaaatagaaatacaggggggaCACACTagtggctacaggaactgaaagc
aaacaactaaggccaatatttttgggttttctgaaggacaaaaggtatag
gaagctttactgaaggagggataaggctggaactatctatttaaaagata
tggacaaaaaatggCACTAAatggcacttttttgggtgataattaagatt
ttacttagaaactttaattctcttacccccgtcctgcccccccccctgat
atgagcaaggaaATCATGTTGAAAATtactactgaaaatttcagatcaaa
acaaacaaaaaaagctggaaaaagctggtttttgactgtttctgatccta
aggtgcttatttttatcatttttccaggataaaaacatttaaaatgtcTT
CGCTGACGGATCAAACTGAATATCTACGAAAAAAGAAGGAAGAAATCCTT
GCCAAAAAGAAAGCACAAGAAGAACAGAAAAAGCAGGGAGTAAAACCTGA
ATCTACGGTTTCCTTTGCTAATGATGggagttttttagaaaaattcaaat
ccatacaaaatcaaaccaaaactCCAGACATTAAAAAAGAACCGCAAAGT
ACTGCTGCACCGATGGCGTTTGCGAATGATGGAAGTTTCATGGAGCGTTT
CAAAGCTATGCAGGAGAAGGGTATCAAGCAGGAGCCTGACTACCAAAAGA
TGGAGAATGTGAAGCCGGCAATCAGTAAAAAGACATCTAGATTCGATCAA
CGACCTTCATCTACTTCAACATCCGCCCAAATAATGTCTTCAATCCAGAG
GCCTGCCTCTGTCTTTGAAGATAACGGTATGTccagatttttctttattt
gttgttgtttcaGGCTAATATGTGAGATACaagatgttgtttttttttgc
tttgataACGATTTTAGATAAATTCACTCTTACTCTTCTAGATACAAAAG
CTTTATCTTTGGTATTTCAatcacattttattttaactttccttttactc
ttttgtgcttagcTGTTATGTGAAGCAGTTTTTGCAATCTTCAAATGAAA
GTGAATAAGATTATGAGGGGGGGGGCTAAATCCAAGTAATTTTGCACTTT
TGATGAAGGCTTTGAGNCAAGAttatgagggggggggggctaaatcCAAG
TAATTTTGCACTTTTGATGAAGGCTTTGAGGAAGAACTTTTAATGATGGG
TCcatattttgaatgttttcgaTTGCTTGTTCCGTCCTCAAATTGCATTT
TTGTTGAAACCCAATTAGGCACAAAAGAGTAATCATGCATTTCTTCCCAT
TCTTCTTTTTTGTACTTGATGAAAAGGAGGTATAAGTTTTATTTAGCACC
CACCCAACCGCCCCAAGCCGATGATTACGAAGTAGCACGCGAGTTGGCGG
AGAAAGTTTACAAAGAAGGAAAACAAGCTGAAATGATCGCACGCATCCAA
GGAAGAACGAACCCCAAATATAAGTATGACTTTTTTGTCTAGTGTATATT
TATGTAGTTGTGTGAAAGTATTTTTCTGACTGGACAAacatttttggctt
ttttattTACCTTGCTCCATGATTCCATACATCTCTGATTTAATTTAAGT
TAGTTTTATTCTattaaattttttcgaaaagcATTTTTGGGCCAATTCCC
CGTATACTTTACATACAGCAATGTcacttttcttttactttttcttccAT
CATTAGGTTTTTATTCAACGATAAAAGTCCAGTCGCACAGTACTACCAAC
GACAACTGGAAAACATGAAAGAGAGTTCGAGCATCCCCTCCTTATCCACC
GCTACAAATTCATCAAGCCAGCCATCTGCTGTTGCTGGTTCTTCAAGTAA
TTTTCACTATTGCTTTTATGGTTATGGTTTAAAAGGGATAATcaaatggt
ttgagatatttaccCTGCATAAACCTTCAGTGGTCTTCAGTAAAACCtcg
aagtatttttttttaaaactattttccgaagtcgagatatcacaatctga
aatttctaaaaatgggtTCTTACCTGTTCTTACGTCAAAATTGTTTTCTT
GccgctaaaaatcaaaaacttgtaacttgaaTATCTCGACTTTGAAAACT
AGTTAGGCAAAGATATTTAGAGTTTTTTCTCGCGACAATAGAATGAATCC
AAAtaccaaatatctcaaacctcTGATTGTCCCTTTAAGTACCATATTTC
TATTTGAATTAACAATTANATCAAAACCCAAGACCTAAATGtagggggta
gaaactatgatGATCTATAGTATCTCTGTTTTAAATGGCTGGTGAACTTT
TTTTATGCATTTTCCCCAATTGGTAAAATTTATCTGAAACAAGAATGCTT
GTGACTTTTGATAGTCCGatttaattgcaaaaaatgtttttgcttctttt
agaaaatcaaaaacgctatatttgaatgtattttccattgaaaacttcgc
gatttttagcggtttaatttgcgattgcaaagaTTGAGCTTTTTTTATAC
TTATGCTACAACGCAAGgtcaagaaaaaagttaaatttcaaggcaaacgg
aaaagtcattcggaagatatgggacctgAAATACCCATTGGTTAGCATTT
TTCTGTGAAAcatcaaatctccaaattttaataaaaacgggggtagtgat
gataaaacagtttttcaatcatatattataacacattttacgatcttttt
acgataatgacctcatagccaaactgtgcatagtgttttgggaattagct
tacttaaaaataacaaagaacAAATAAGTTCAATGTGTCTTatcgtttca
ataaaaacaatcaaatttgttttgaaatgatacCAATAACGCCAATGCAG
CAACACTGTCttaacactttccaacttttaattggactgttcaaaaaaga
caacataacccccgtttttagtaaagATTTAGAGATTTGATGTTTCACAG
AAAAATGCTACCAatgggtatttcgggtcccatatcttccgaaggacttt
tttgtttgccttgaaattgaACAACCTTCTTTGCCTAAGGCTGAACTACC
ACTAgtttaaaaatgaacgttatagcataaaaagaaaaaaagctcaattt
ttgcaatcgcaaatttaaccgctaaaaatcgggaatttttcaacaaaaaa
tacattcaaatatagcgcttttgattctctaaaacaagcaaaaaaaaatt
ttggaattatatttcacTATTAAAATTTACAGActttcttgtttccactg
ccaattatatctggacagactttagtgtgTATTTGTGTAGTTAAACCCAA
GGTGTGAAATTCCATTAGTATTTTTCTGAGTGGAGAAagatttttggctt
ttttggacctaccccggtgggctgtaggtcctataaattaacctctgttc
gttcgttcgtccgttcgtccgttcgtccgttcgtccgttcgttactagct
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tttttctgattttttgcagaaagatgcgtatttgcaatggtcaaaacatg
gccgagttcgatttttgagaaaaaattttttccggttgaaaatgccggaa
atcgccgtctttgcagattttcattatattttttccttgtatttcttcac
acaaaaacactattgataacaatgctcaccatcaagcatgattcaattgt
caataaaactgatttttgcgaccagaactttctattaatttttccctaca
accctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNatgcattttcgctaaacgatatattttctgac
tgatttttttctcctcgcattgctatctaactttcatcatcaggtaggtc
cattcagcatctagcttgttatttACCTTACTCCATGATTCCATACATAT
CTATGAAGAGccattttctgagaaaaataggcaaaaatgggcAAGGTCAG
GAAGTGATATTcctcatttttggatattttgttcagattaatgaaaaaaa
acatcccctgaaaattttttcgaaaaattcctTCCGGTTGGTGAGATATG
GCCCATTgaaatttcgatctttttggCTATTTGGGTCTGCAAAATGGAAG
AGCTTCTTtcatggctggaacccccccccctggcctgAGGTCGAGCAGCA
ATGGGTACCTGATTTTAGgctgtggctaggggggactaacccctaaattt
tttcagatggacctgggggctagattctatgtttggtgatttttttctga
acttgtttttctttcatcatAAACTGCACTATGCAGAGTTGCTACGTCTG
CCTGAAATGTCTGGAATTAAGTTAAAGTCTGGAAATGTCTGGAAAGTCTG
AAAAGAGTCTGGAATTGGCATACTTGTCTAAAAAAGTCTGGAATTGACAT
TCATGTCTGGAAAAAAATATGGAATTTGAAGGAAATAGTCCTGAACAAAG
TCAAGTAAACTTTCTGGAAATAGGAAATTTTTATCCTGGCATTtgaaatt
cccaaaaatttaacCTTTAGTCATGTTTATTCTGTAATTTCTCATTCTGT
TGTATTCATCAACCTGGCCTTTCAAATGACCGTTAAGGAAAAACTAAAAA
CCTTCCTAATGGATAAAATGCCTGGAAAATATTGcgtattttgctaaaat
ttctgGAAAATCTTTGACATTTTCAGGCAACAAATCTGAAAAATATGGCT
TTTGAGACTAAAAGTCTGGAATTTCCAACTTGGTAAACCTGTAGCAACCC
TTCTATGGAATGTCTTCTGTGTTTCTGAGAAAACTGTGTGtgcaataagc
taaactaactgttgtatttgtttgattgtttgaaaaggattttcgaaaaa
atatgtcattggcttaggggtcaccgaaaatatttggcaaccaggggtta
cctaaatcttaggggtcacctgaattcctagggggcacctaaaacctgct
gccaagccatgattctttgaaatgatttttaaCCCATTTTGAGCATAAAG
AGGTACCCCCATTTCTTCATTTCTTGGAAATATGGGATAAGTTctacaca
aaaaataaaaaacgaggTTCTGAATATTCCTCAGTGTCTAGAAATCATAG
GCCAAAATCACACATTCGCCAAATTCCTGCCCTTTTTGAGATCAAATATC
TTACTTGGGCCTCACTTCTACATGTACAAGTTAAGATTCTCTGATAAACA
GCTGAACTTATTTTCATTTCCACAATTTCATGGGCCAACAATGGGTGTGG
CCTCTGCcgccattttaaaattttaagtcCGAAATGGTCCCACTTTCGCG
GTCTATAATGGCTGCGGCCCTCActttgacaaacttttttttcaaagaat
tagGTGCTATTGCCCTTCCTCTTTCCATATCTGAAAAGAAATTCATGGGC
TCTAGTCTCTTTGAGTCAGAATAAGCCCTAGAAGTGAGTCTAGTCTACTA
AGATTTCATGCCTGAAAACTCCTTAGCAACGGGTTGTTTACCCGTAGCAA
CGGCTCTTTCAATGCTTAGATGAAAGTGCTGTGATGTTTCTGTTTAGTTG
GAAATGGCCAGACTTAATTCTGAATCTTAAATAGGTACAATGCAAGGAAA
AATAGCAcctattaaccctttaagtgccaatatGTCGTACATATCAGACA
CGGGCTATGTCGGacgccctcctgtaatgcccagtttgagttagaaatcg
tcaaaATCGTCCAAAAATGAGGAAAACTTAAAGACATCACTTCCTCACTT
TGCCCGGATCTCTCAGAAAATGGCTCTTTAATATAAGTTAATTTTACTct
atcaaattttttcgaaaatcattttTGGGCCAATGCGATAAATTCCCATA
TACTTTATACAGCattgtcacttttttttattttttcgttcatcACCAGG
TTTTTATTCAACGATAAAAGTCCAGTCGCACAGTACTACCAACGAAAACT
GGAAAACATGAAAGAGAGTTCAAGTATCCCCTCCTTATCCACCGCTACAA
ATTCATCAAGCCAGCCATCTGCTGTTGCTGGTTCTTCAAGTAATTTTCAC
TATTGTTTTTATGGTTATGGTTTAAAAGGGATAGTcaaatggtttgagat
atttaccCTGCATAAACCCTCAGTGGTTTTCAGTAAAACCTCGAACTATT
TTCCGAAGTCGagatatcacaatttgaaatttctaaaaatgggttcttac
atCAAAATTCACTTGTTTTCTTAGCTTTCTCTCGCAACAATAGAATGAAT
CCAAAtaccaaatatctcaaacctcTGATTGTCCCTTTAAGTACCACATT
TCTATTTGAATTAACAATTAACATCTTTCCCAgaactttcttcttttctt
cttttctatGAGGAAAAAATTGAGGATTGTCATCTTTATTATTGATAaag
gctacttagactacacaatatatatTGACcaacaatatttgacaatatct
TTTTCGGACCGTATTGTACGAAGTAATTAACAGGtgttctattataaaaa
ggaattttctttctgtaaacaatccctcTAAGttgttggaaaattgcaaa
tcaagctgacaatatattgcggacaccttttcaatatattgtcggCACTc
tgcaatatatcatcaatatattgcctgacaatatgttgtgtagtgtatgt
accTTTAGTTTAAGCTCGATAATTAACTCTGTTAAAAGAATGCTTCATTC
ATCAATATCAATGCACAGATCCTTCAATTCTTCCCCTCAGGATGACCCTT
ATCATCTGTTCCCCAGATAATTGCCAGTGTATTTTATGTACAGTCAACTT
ACTCTAGTTCTAACTGCTATTACCTtactggaactaattttcgtgggaGT
TAATATTCGCGGTCGAAAactaaaatcagaaaaattgcattgcgcgggtt
ttaattttcgcgtttttgccgttttttggacaaatttctttcattttcct
agggatttttcaaatgtttgatgaaattggaaaaaattgtattgtatcaa
aaacgctaaaattaattcccgcgaaaattagttccaataaggtattcaga
atctttctataattcgaacaagttgGTCTCCCCCAGCTGTAAAGTGATTT
AAAtgctctctgtaattcgaagaaaatttttcccatGAAAACGTTAGATA
TCTAAGTTGGACACTTTGCAAACATTTACTTACACTTTTAGGTGTATTGA
TCAAAATTCAGCTTTGAAATCATTTCGCTATTCCTTTTGCTTTCTACCTT
AGGCGCATCCAGTTCAGGTGGATCATCTTCGATAAACTTGATGGCAGATT
TCGAACGTGCCAAAGCCCTGGTCAAAGCCAAAGCTGCAGCCATGAAGGAA
GGAGGAATTTCTGCTGTTTCGAGCGCTGCttctgaagaagaagaaagacg
aCAAAAAGCTATCGAAGAACAAAAAATGGTATGAGTGAGATAAAATAGAC
TCCCGCGCAGAACACTTATTCGCGTATTCGAAATAGTTTATAATTCCCGT
CTTAGGCTAAATTCTCTCTCAGTTATTCCAAATTTTTATATACGGTAGTT
AGTAAAAGAACGCAAAATTTTCAATGACCTTTTATCAATCAAAAGGACAA
TGTTACTACAATCAAAGCACTTTTTGTCAACTCCCGACattaaagaaatt
gaaaattcgatggaaaaaaaaaagcttttcagtCATTCGAGCccaattat
tttctttttagtcGTTTGTCATaatcatagtccgtataaaaaactctGGT
CTGGAAGTTTTAACTTTGTTATCTTTTTCCTATGTTAatttcaaaagatg
aaaatggaTTTGCTGAGTTTTCGATCACGTTACCCATcattcctcttggg
attggtttaagatttaatcacatggtCAAAAAGCGAGCAAAACTGATTTC
TCAAACGCAAATTCAAATaagaaacaatgaaaagaaagaaaaggcttcca
gaccggagtttttttatacggactatgtcATCATCTACTTTGCCTGAACG
TCCCTCCTACCCTGCTAAATATCTTTGAAACGAAATTCTAAGTGATGTAT
CTGCTATTCTACGAAAAGTTTCTTTGGGTAACCCTTTGTTTGACTTTGAA
ATATAACTCGTTTGCTGTTTTTGGTTGAATAATTTGGGACTGAGTATATT
GGGCTGATTTTAGTGTCTTGTAAGCTGAAGTTTCAGTATTTTTCTGGGAA
AGAAAAGACAATGTCGATAAAGTGGAAATAATCATTCACTTGTAATTTAT
ACCGGTAACTAATTTGTcaatatcaaatcaatatcaattgaccttttcat
aaattacgccaCGACCAActcttacctcgttttcaaaatattgccaTGGT
AATCGATTCCCGGAGGAGTTCactctatttataaaagtaacaCTTGAAAG
CTCTagggatttaatcaccttggtaatggtttcaaaacgaggcagtcgtt
gcactcaaaataattataGAAAGTCTTCGCCGCTGTTTTGTTGGGACgtg
atggagtttttacaagctcttatttgatttggttggtcgttaacgagtca
tttttattacttcgaatgaccaattattaaagtatctcataaaaactcaa
tctCATCTGGTTTCGTTTGTAGATGAACGAAATTTACATGAAAGTGATCA
CACAACAAATGGCGGCCGCTTCCGAAGCTAACAAGAAACGGAAAAGGAAA
CGTGATCCGGACAAACCGAAATACGAATACGACTCGGATGAAGATATAGA
AGGGGGAACTTGGGAACACAAGAAAAGAACTCTTGAAATGCAGAAGACCG
CTGGTAAGCTTTTCCAGGAATACTGTCTAGCCAGTAGAACCTTCTTTTCG
CTAATATCGAGGCCAAAGGTAGAATTTCACTAAAAGAAAAGGTCCAATCG
CNTTAAATCTTTTCCAGGAATACTGTCTAGCCAGTAGAACCTTCTTTTCG
CTAATATCGAGGCCAAAGGTAGAATTTCACTAAAAGaaaaggtccaatct
caaaattttaaatttcaaaacaaaagaaatatcaaGTTTTCTCAGAGTCC
AATTTAGAGTATTTATTTTTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041558XLOC_041558Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066393-exon-scaffold_455-1491911889:141939..142154TCONS_00066393-exon-scaffold_455-1491911889:141939..142154Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1510915933:141939..142154TCONS_00066393-exon-scaffold_455-1510915933:141939..142154Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1575043694:141939..142154TCONS_00066393-exon-scaffold_455-1575043694:141939..142154Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1491911889:147916..148364TCONS_00066393-exon-scaffold_455-1491911889:147916..148364Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1510915933:147916..148364TCONS_00066393-exon-scaffold_455-1510915933:147916..148364Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1575043694:147916..148364TCONS_00066393-exon-scaffold_455-1575043694:147916..148364Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1491911889:148885..149011TCONS_00066393-exon-scaffold_455-1491911889:148885..149011Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1510915933:148885..149011TCONS_00066393-exon-scaffold_455-1510915933:148885..149011Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1575043694:148885..149011TCONS_00066393-exon-scaffold_455-1575043694:148885..149011Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1491911889:155038..155177TCONS_00066393-exon-scaffold_455-1491911889:155038..155177Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1510915933:155038..155177TCONS_00066393-exon-scaffold_455-1510915933:155038..155177Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1575043694:155038..155177TCONS_00066393-exon-scaffold_455-1575043694:155038..155177Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1491911889:156391..156566TCONS_00066393-exon-scaffold_455-1491911889:156391..156566Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1510915933:156391..156566TCONS_00066393-exon-scaffold_455-1510915933:156391..156566Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1575043694:156391..156566TCONS_00066393-exon-scaffold_455-1575043694:156391..156566Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1491911889:157761..158211TCONS_00066393-exon-scaffold_455-1491911889:157761..158211Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1510915933:157761..158211TCONS_00066393-exon-scaffold_455-1510915933:157761..158211Clytia hemisphaericaexon
TCONS_00066393-exon-scaffold_455-1575043694:157761..158211TCONS_00066393-exon-scaffold_455-1575043694:157761..158211Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:141939..158211 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.16614	1.21011	5.5518e-05	7.83145	1.49985	1.07497	2.27587	1.08796	6.25919	4.84349	0	0	0	0	0	0	0	0	0	0	8.12333	6.02784	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066393 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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