TCONS_00066376 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066376
Unique NameTCONS_00066376
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length825

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066376 ID=TCONS_00066376|Name=TCONS_00066376|organism=Clytia hemisphaerica|type=transcript|length=825bp
tattataCAGACTTTGGTTTACCTCATCCATATCAAGGATTGAATGAAAC
AACCCATCTTCCAACCGATCAGTGACGCGCAGTAGAAGATGGAGTTCATC
CACACAATAATGCTCGATTGGAACGTTTTCCAAGATAGGGTCGTCTTTGC
ATCCACGTTGTTTTGACCATTTAGCGtctatttttctcttcttccCTGTA
AATGTTGGATCTTGTCTGAAATAGAGagGTTGTTCTCACCTCTGTTCCCT
TGTGATGTCACAATAAATACACGAGTTGTCCGAAGTAGCTTGTTTCATGC
CGAGTATCATGAGAAGAAACTGTGGATAAAAAGGAAATGGCTGAGAGTCA
CTCTCTCCATAAACCAATGGTTGGTGATATGTGTCGCCATTTTCGGAATG
CGTGTCAAACATGGCTTATTGAAACGAAACCGTTGTTACTTGGTGGTGAA
GGGAAGCATCTCTTGATAAAAAAACTGAAGCTTGTGTCAGCCAAACAATG
AGATCTTCAGCCATCTTGCCACTGTCaatcaaagattaaaaagatgCAAT
AAACCTCTTGAAGTCAACGACGGAGTACTAGCAGATTGGACCAAGATACC
TACCTCTTACTTTCAATTAGGCGCTCCCATCTCTAACGTtgaaaatggca
aaacgatAAATTTGGAACACGTTCCACTGAAGCATACGCTCGTATTTCAA
CAAATGCTTATCATGACGAAGTCTCCAATTTGGAATTGCTTGCTGATGAA
GCAGACGCTCATATCTCAACAAATGCTTATCATGACGAAGTCTCCAATTT
TGAATTGCTTGCTGAAGAAGCAGAC
Run BLAST on NCBI

transcript from alignment at scaffold_454:62547..77918-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066376 ID=TCONS_00066376|Name=TCONS_00066376|organism=Clytia hemisphaerica|type=transcript|length=15372bp|location=Sequence derived from alignment at scaffold_454:62547..77918- (Clytia hemisphaerica)
TATTATACAGACTTTGGTTTACCTCATCCATATCAAGGATTGAATGAAAC
AACCCATCTTCCAACCGATCAGTGACGCGCAGTAGAAGATGGAGTTCATC
CACACAATAATGCTCGATTGGAACGTTTTCCAAGATAGGGTCGTCTTTGC
ATCCACGTTGTTTTGACCATTTAGCGTCTATTTTTCTCTTCTTCCCTGTA
AATGTTGGATCTTGTCTGAAATAGAGAGGTACATGATTTTTTTAATTAAA
GCAAACAGCATTATTGTATTGAAAATATTGAGCATTTTTCGTATGTGTAG
ATGGTGTAGAAGCTAGAAAACTCTGAACATGCTTTTATTTATTATGTATT
GTAGCTTTCTACGTTAGAGAACTTTATAAAAATCATTAATTGCATTAATA
TTTAGGTTGTTCTCACCTCTGTTCCCTTGTGATGTCACAATAAATACACG
AGTTGTCCGAAGTAGCTTGTTTCATGCCGAGTATCATGAGAAGAAACTGT
GGATAAAAAGGTAAATAGAATGTTACCGAGGCGATTTTCTTTCTTCAAAA
AACTGCAAAGTGACCTGTTACAATTAAGCACAAATAATAAGATTTTTAAG
TGTTGCCTACCTGGAAAAGAGTACGCGACTTTTTGACCAGACCAGACCTC
TCCACCAATAAACAATTCAACATCCAATTCTTTGCCACCAACCACAATTG
TGGTGTTTTTTGCAATTTCGTTGACTTCAGTGATAAAATCTTGGATTCGG
CACGCGCTAATGCAGCTCTTTCTTAATTGGTTATTGGTTATTGGTTCATT
GAAAATCCTCAAGATATTATGCCCTATGGGAACAGATATCGTAAACACAA
GATAGAGTTACTCATAGTCCCTTTTTTTGAATGAACAAATCACTGGTACT
GAACTGTTGTTTACAGTGGTCTACTTTTACCAAAGATATAGTTGCTCTGT
TTGCCTCATATGAGATATCCTGTGCCTATGGGATTTGAAAAAAATGTTTC
ACGAGTTTATACATGAATGTCTCAAATTCTTTTTTATTCTTTATTATGTC
TTTATATCCAACTCCCTAGGCGATTTGATTTGTTTTTCTCATGAAGCTTC
GTATTTTTTTAAGGTTAACTGTTCGTAACTGCTTTTGCTACCAGCTGACT
TTGTAAGGTGGCCGTGATCACATTTAGATTAAAGCCCGAAGGGCAGGAGT
AGGCAAAAAAACAGAAACCTTAAGAATTGCGCTGCAATCATGACGACGGA
TTAAATCTAGTAGTCTTTTGTTTTTGAAAAGCACATTTTTCGAAATCTGG
CAATATATTCTACTTCTAATCCGGCGTTTTGTATCAAAGCACGTGGAGAG
CGCGTTTGAGATGAGAAAAACGTAGTAAAAATTTCCATCAAAGAGATTGC
ATTCTAATTTAAAGTTCATGCGCGAGCATCATAAAGTCTGTCTCAAAATA
ATTTGCATTTCTACAAGAAGTTGATTTTTTTCTTCTTCATTTTTCATTTT
CATTATTCTTTTTTTTTCAAATATTTTTGCTTGATAATATTCCACTCACA
AATATCTTTTCAATGAGCACAAAATTGCAACTTGATTCGAGTTCTATCAA
AAGTTACAGCCATTTTTTGTTTCAGCTGCAAATTATTTTGAGACAGACTT
TAGTTCGTTTTCTCNTTACAGCCATTTTTTGTCTCAGCTGCAAAATATTT
TGAGACAGACTTTAGTTCGTAAATCACACTTCTATTCATGTGAGAAACAA
GTTAACCATGGCAACCAGTCCACTAAGTCGGACAGTACAAAGTAAATGTG
CCATATTCCCGTGGTGGAAACAGGGATATGTTATAGCGTAGCTGGATGAA
GGACGAGTATTCCTTAGCGGATTGCTTCTTTGTCTTTTCTATTGTAAACT
GTTGATAATAGAAATCCATCTCTGTCCCCTTGAGTGTTCTGTTTTTATAA
GAAAAATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTGAAGCAGACAAAGTATTCATGCAGTACGTTTGCAC
ATATTTTGCTATGATGTTCCCGCTTTTCATCAAAATAATATTTGTAGAAG
ATACCCCAAAAGCTTCTTTGTAAATGAAATCTATTTTTATCAGCGAGTGT
TATGAATTTGAGAAGCTTTCATGATTTCTCTTTAAAAATTTCGGACGTAA
ATATTTTGACAAATATTGTTTCAATTGACTTGAAATTTTTTACATAATCC
GACATACCGACTTGCTATCTGAAAATATCAGTTAGAAAGTGAGGCAATCC
ACGGTGTAGCGCGGTATTTCAAATGAAAAAGTACTATTTATAATCTTAGA
GAAGAAATTTCTTATAACTTTACTAATGAAAACAATGTTTTTCATTTTCT
TTAAATTGTCATTCACCAATGTTTTTAATCATGAACGATAAATGCAGCAG
CAGAATCATTGGCTAAGAGGAAATCCAAATTTCACGAGTTTGTAATTAAA
AAAGTTAAATTTCATATCAAATTTTAATGTCAGGGACAGAGATAGAACAA
GGCTTTTTTAAATGTGCGTTATCCAGCTACGCTATAACATATCCCTGGTG
GAAATAAGAAGCATAAAAAGTTCTGTTTTTTTTCTCTTGAAATTATCTCA
ATACCTTGACTTTCACGATTGTCGCCGCACAAAATTGAGAACTAAATCAA
TTTTATTTCCTTGTAGGAAATGGCTGAGAGTCACTCTCTCCATAAACCAA
TGGTTGGTGATATGTGTCGCCATTTTCGGAATGCGTGTCAAACATGGCTT
ATTGAAACGAAACCGTTGTTACTTGGTGGTGAAGGGAAGCATCTCTTGAT
AAAAAAACTGAAGGTAATCTATTTGAATTTCATCAATAATGGTATGTTAA
AGCTTTCATTTCTTTTGCAAATTATCAACAATCGAAGAGTACGTTTTGTT
ACTAAAGTCAGGCTGAAATCTGAAAGAATCAAGCATACAAACTTATCTTT
AATTCCTTTTTATTAATTATTTTCAGTGCAGCGACAAACTCGTTTTGGAA
CGATTACAACAGTGATTATAATTGTGATTAGAATTGTGTTGGAAATGAGG
ACTGCGAGATCTTGATCGTGGTTGATTCTGAAAACTTAAATGGCTATCTT
CTTCGTAACACCAATGGAAGATACGAGCAGGATAATCAGTGGGTTCTTCC
TTGAAAGCATATAACCTTCGTTTTCTCAGCAAAAGTTTTTAACTTGCCTC
CAAATTGCCTCCAAAGTGGAGCAGTCGATTTATTTCAGGGTCAAAATGTT
AAAAATACAGAGGAGCATGCTATTAAATGGTTACGTTTAAAAAGGGGTAT
AAGATGCCCACAAGCTGGTGCTGTATTAAGTGAATACAATTACAAACNCC
CCTGTATTAGATGCCCACAAGCTGGTGCTGTATTAAGTGAATACAATTAC
AAACACTTTGTTTGTAATGGAATCGACCTTTCAAACAATGTGGTGAAATT
ATTCAAAGATATTTACGAGCCTTTGTTTGTACAATAATATTTTTAAACTA
TGACGAGAAATACAAGTTAACAGTTACAAACTAAAACAACTTCATCTTAC
TTCGAGTTACCACTATTCTCTTCGCATGACTTTTTTCATGCATAGCACAA
TAATGTCCGAGATAAGGAGTTGCCTTAAGCCTCGTTTCCACAAACCGCGA
GCGCCGTGCGGTGCGACCAAGTTACTATAAATAGAATCTGGTCGTAGAGA
CCTCGCGAACGTGGTTTAATTTCCACAGAGCGAGAGGCCAATAGAAAAAA
AAAGTAATATAAAAAAAGAAAAAGTTCGTGACTATCGATTTACGCACAAT
CTGTACATTTTCATATTTTATTTGCTTAATCAGCAGATTTTCTCTCTCCT
GATTGGTTCATCAAATTCTGGTCGCAGAGAACGCTTTTGGGAGTTGAAAA
TTTTCAGCTCCCAAAAGAGCTCAGTTGCGCTCGATAGAGCTCACACTTTG
AGTACAAAAAAAAATCATTCGTGACGTCAATGAGCTATAAAAGGAAATTC
TGATCGCACCGCACCGCGCCCAACCGTTCGCGGGGTTCGTGGAAACCCGG
CTTTAAATTTTATTAAGTCATAATAACGTACGATTTAATTTTTTTCGTAG
CTTCAATTACAATTTAAAGTGTCTGGATTCTATCCAATTTACAGCCAAAC
ACATATCAGTGGAACTGACTGACCTACGTATCAGTGGAAGGGTGTGGTTC
TAAGGTGTTTTGGGTGCGAAGCGTATCAGTGAAAGGTCTAGGTTCTAACG
CGTTTTGGGTGCGAAGCGTATCAGTGAAGGGTCTAGGTTCTAACGAGTTT
TGGGTGCGAAGCGTATCAGTGGAAGGGTGTGGTTGTAAGATGTTTTGGGT
GCGAAGCGTATCAGTGGAAGGGTGTGGTTCTAAGATGTTTTGGGTGCGAA
GCGTATCAGTGAAAGGCCTAGGTTCTAACGCGTTTTGGGTGCGAAGCGTA
TCAGTGAAAGGCCTAGGTTCTAACGCGTTTTGGGTGCGAAGCGTATCAGT
GAAGGGGGTGGTTCTAAGATGTTTTGGGTGCGAAGCGTATCAGTGAAGGG
TCTAGGTTCTAACGCGTTTTGGGTGCGAAGCGTATCAGTGGAAGGGTGTG
GTTATAAGATGTTTTGGGTGCGAAGCGTATCAGTGAAGGGTCTAGGTTCT
AACGCGTTTTAGGTGCGAAGCGTATCAGTGAAGGGTGTGGTTCTAAGATG
TTTTGGGTGCGAAGCGTATCAGTGAAGGGTCTAGGTTCTAACGCGTTTTG
GGTGCGAAACGTATCAGTGGAAGGGTGTGGTTCTAAGATGTTTTGGGTGC
GAAGCGTATCAGTGGAAGGGTGTGGTTCTAAGATGTTTTGGGTGCGAAGC
GTATCAGTGGAAGGGTGTGGTTCTAAGATGTTTTGGGTGCGAAGCGTATC
AGTGGAAGGGTGTGGTTCTAAGATGTTTTGGGTGCGAAGCTTATCAGTGG
AAGGGTGTGGTTCTAATATGCTTTGGGTGCGAAGCGTATCAGTGGAAGGG
TGTGGTTCTAAGATGTTTTGGGTGCGAAGCGTATCAGTGAAGGGTCTAGG
TTCTAACGTGTTTTGGGTGCGAAGCGTATCAGTGGAAGGGTGTGGTTCTA
AGATGTTTTGAGTGCGAAGCGTATCAGTGAAGGGTCTAGGTTCTAACGCG
TTTTGGGTGCGAAGCGTATCAGTGGAAGGGTGTGGTTCTAAGATGTTTTG
AGTGCGAAGCGTATCAGTGAAGGGTCTAGGTTCTAACGCGTTTTAGGTGC
GAAGCGTATCAGTGAAGGGTCTAGGTTCTAACGCGTTTTGGGTGCGAAGC
GTATCAGTGGAAGGGTGTGGTTCTAAGATGTTTAGGGTGCGAAGCGTATC
AGTGAAGGGTCTAGGTTCTAACGCGTTTTGGGTGCGAAACGTATCAGTGA
AGGGTCTAGGTTCTAACGCGTTTTGGGTGCGAAGCGTATCAGTGAAACTG
GGTGGAGAATTAGGCGGGGTCTACTTTCGGTCAGTAAATTTACCTTTGGG
CGCTAAGCGTATCAGTCACTCTCACTGAAAGGCTTGGTGCCCATGGGCCC
TGTAATGTCAACCTGATCCCGATGTTCTTAAGTTTCTTTTATCTCGAGAC
ATTTGGCTATTTATATCTCCACCAGACACGACAGGAGTTACTCAATTCCT
CGACCAGCTTAATAAGAATACAAAATATATACATTTAGAATACAAAAACG
CTTCTATCGAGGATCTGGCATAAATGGGCAACTAGTGAAACACTTGTTAA
GTGTTCAAAACGCGCTGGCATCACTAAAACCTCATTAAATGTCAATTTTA
TGCAGGAGGACAAGTTTGAAAGAGCACAAAACTTATTAGAGGAGGCTGGT
TCATCAAACTCAAATCCAACCCTTGCTGAATCATCCCCAGTCTCAATTGT
ATCACCCTATAAAAGAAGGGGTTCGGCTGAGTATTGGAAGAGTAAATTCG
AACAGGCCCAAAATTTGATTAAAGATCTCGGTGAAAAAAGCATTGCCTTA
GAGGAGGTACCCGGTTTGTTGAGTATCAAAAAAGTTAAACCAGCGACCGA
AAAAAAGTCAGTGCGGGTGACAAATGTTTATGGATCGATGCAAGCCAAGG
ATGTTGCAAGCCAAGTCCAGGTCATTAAAGAAAGGAAGAAAGAAGTGGAA
AAAGTCAAGAAAGACAAAGCAAATCAAAAGGAGGATAACAAAGCTAATTT
CCTTAAGTGTAAGGACAAGTGCACATGCTCTGAAGAAAAATGTTTGGCTA
TTGGGCTCAAACAATGTCCAGTTTGTAAGAACGTGCTACGATCGTTGTGC
AGCAAAGCAGCTTGCAAAGTAGATGGTCAGAAGCCAGTGATGATCCTTCC
AGCAAAGGCCAGTTCATCAAAGAAAACTTTAGATGATAGTGATGAAAGTG
AAGAAGAAGATATAGACATGTCTGAAGAGAGTACGCTGGAGGATGAAACA
TACGAAGACGAGGAAGACAAGGAAAACAATGACCCTGAGGAGCAGGCGAT
TGTTGATATGCAAAAAGTGTGGAATACCNGAAGAAGATATAGACAAGTCT
GAAGAGCAGGCGATTGCTGATATGCAAAAAGTGTGGAATACCATCAAACC
CCCAGTCAAAGAAGCAGATATTATTGGAAAGTGGTATGCTGTTTGTTTTC
AAACAAAACGCAAGACATCCCTTTTTGTGGGCAAAATTTGTAAAAGATTT
TTGACTGAAGAAGATGGAGATGTTGATAAAGTTGAAATTCGGTGTTTAAA
GGCAAAAATAGGCCAAGGTACAACCCTTGAAGATACACCTCANGTTGAAA
TTCGGTGTTTAAAGCCAAAAATAGGCCAAGGTACAACCCTTGAAGATACA
CCTCAACACCTTCCAGACATTGGTCTTTTTAAGATGGAAGACATCATTGC
TGGTCCCTTGAAAGCAACTCCAATGAAAGGAAACAAATTCTATGTACCAG
AGTATCCATCTGTCAAAGAACGTTTCGCTATTGTTTCAAAATTGAATAGG
AATACATATTTACCTTATTAATGACATGTTGCCATAATTATGACTATTCT
GGCATGACATAGTTGATATTATTTTGTTGTACATTTTGTGTTCATGTTAT
TTTCTCATGTTTTATTCAAAAAAGAGATGTAAATCAAAGTAATTAATAAC
AGATTTTCCAAATTTCATTTCTGTAACCCAGGTGAACCCACATTGCGATA
TGCTCACTTTTCTGACAAAACTATGAGATTTGTAAATAATTCCTGCTATT
CAAACTTTATCTCTTTGAAAGATGGCTGTTGAAGGTTGATTTTAATCCTG
GGTTTGCAAACTTAGTCTCTTTCTTTATTGATTCAGTGCCTTAGTGTAAA
AATTTTGAAAATTCTGAACTGTGATTTTTTTATAAATCGGGCTGCAATTT
CCCAAAATGAAAACTTTTCTGATTAAATGGTCATAATCCTATGATACCAT
GGCTCTCCAAAATAGAAATATTTTTCATCCAAAATTGGAGTTTAAGTGAC
TGTGCTGTTTTTGGGGTACTATTGTTTTTGGGGTACATCCCGGGGGGGGG
AGTACTTAGGCAAAAATAGGTGCTGGGTATGTGCGGACGGTAAGGGTCGG
GTTTTTCACCTTTCAAAGTCTCTCTAAGGGTTACAAAAATCAGGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCTCTCTAAGGGTCACTTTTTCACTAAAATTTAGTCTCTC
TAAGGGTCGGTTTTTGGAGGTCCCGTCCGCACATACCCCTCATTCACCAA
CCTTAGTACCCTCCCCCGGGGGTACATATACCTGTATAGCTTTATAGGCT
CCACTTTATTTGATGTAGTATTTATAAGAAGATATATTTTAACTATTTCA
TTAGTTTTGAGACAATTTTTTAGACTGTTTATAGGCTTTACAGGCTCCAC
TTTATTTGTTGTAGTATTTATAAGAAGATATATTTTACCTATTTCATTAG
TTTTGAGACCATTTTTTAGACTGTTTATAGGCTTTATAGGCTCCACTTTA
TTTGTTGTCGTATTTATAAGAAGATATATTTTAACTATTTCATTAGTTTT
GAGACAATTTTTTAGACTGTTTATAGGCTTTATAGTAGGGTGTATGATGA
AATGACTTTTTTTCAGAATTGCACTTTGGACAAATTTTTCTGGTAATTTA
ATCTATTCTAAGACTTTCTGTGAAAAAATTAATTCAAAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGCCCTGAAA
TTGGGCCTAAAATGTTCCTTGGAAAAAAGTAGGATTAGAATGTAACAATG
ATATAGCTCTATCATACATGAAAATTATTAAAAGTAGTTTTTTAGGCCAA
AAAAGACCGAAAACGCGAAAAAATGAGGTTTTGCCTGAAAAAAAATCCTA
AATCCTGCTGTGTTGGTGCTACAGCCCTGAAATTGGGCCCAAAATGTTCC
TTGGAAAAAAGTAGAATTAGAGTGTAACAATGATATAGCTCTGTCATATA
TAAAAATTACAAAAAGTGTAGGTTTTTAGGCCAAAAATGACCGAAAACGC
GAAGAAATGGGGTTTTGCCTAAGAAAAAATCCTAAAATTCGCTGTGTTGG
TAATACAGCCCTCAAATTGGGCCCATAATGTTCCTTGGGAAAAAGTAGGA
TTAGAATATAACAATAATATAGCTCTATCATATATAGAAATTACAAAATA
ATAGGTTTTTAGGTCAAAATTGACCGAAAAAGGCGAAAATTACTCAAAAT
CAAGATTTTCAGTGCTCAAAGCATATTGAATCAATTTCTGACACTCTCAA
TTGCTTTAAAGTGATAAAATAGATGTTTCATTATATATAATCTAGTACAA
TAAGTTAACCTAATGGCAAAATTGAGCAAAAATTTGGGTTTTTAAGGGAT
ATTTTATTAAAAATACCCCCAAAATAGCGGAAAATAGCAATTTTTGAGCT
TTCATAACTTTTAAAGGCTCAATTCAAGACTTTGAAATTTGGCAAAATTA
AAAACGAACAGAAAGATAGCCCGTACATTGGAAATCAAACAACAAAATAT
TGTACAAAATTAAAAAGAAGTGATAGCCAGCAATGTTGATGAAGAAGATG
CAGCCAAGCTAGCAACCAGCAACAAAGCAGGTGTGTATCTGCTTGCAAAA
AATCCCACCAAGGGCCAATCACTAAAATTGAAGAGCTTGACACCCTGGTT
CAAGACTGGAATGGTACAGAAAAAGGGCTTCAAAAAGCATTGGATTTGGA
GATCAGGTTCAGAAAGTTCACCTTTTATAAAGTGAAGACAACGTGTCCCT
TATGTTTAAACAACGTGGCTTAACAGTTGAGCAGAAGGTGAAATATTTGA
AGACTCTAATCACATCTCAACTGGAATTTAGAGTTTTAGCTGGCATGATG
GATCTTGAGAATGCAATCAATAATAATGCAAGCACAACTGACAATGAAGC
AGAGGTGGAAGGAGAGCAAGATGAATTGATGGATGGTATTACTCAACACG
ATGAACAAGAAAATTTTAGAGGAAAAGAGGTAACTTTAAATCTTAAACCC
ACCTATTCCATGAACCTTTGTGTTTTTCAGGATAAATGAATTGATTTACC
AATCAAAGGAGAAACAAGCACTTGTTATCATTTCAATATGTTCTGGATTT
CAAAGTTTATGTATCATTTTCTTCAATATATAGGTTGGAAAGGCAAGAGA
TTCAGATTGGCCACCCATTGTTGGATATCTTCTTATTGGAGCATTCGAGG
ATGGTTTTTACCCAGGTTAGATTTTATTTCATCTTTAAGTATGTATAATA
CTGTGTTAAATAATGAAAGAAACCCCTGATCTTTTACTTAGTAATGAATT
TTTTTTTACTTTTTAGGTGAAGTTGTGAGAGTTGGTACAGAAGATGTGAA
CTGCAATTTCATGACACCTGTTAGTGTAAATGACCAAATGAAAAGTCTTT
GGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CATGAACATATAAACGACTGGACATCCATCTCCTTTGTATTTTTGAAGAT
AACACTGCTAGCTTCGTTGCCGCCTCGTTAAAATCATCAAATGAAACAAT
AAATTCTTATGGTATACCTCTTGGGAATACCTTGCTAACAACGTCAAAAT
GTCGACAAAATGTCGACAAAAGTCTCTGTTGTTCTACTTTTCTCAAGTCT
TTTATCTATATCATAACAAAAATAACAGAGGCAAAATCATCGTCACCTTG
TCAAAACTCCGACTAATATTTAAAAATTTTGACTTAAAAGTGTCTTATAA
TTTTAGAGAGTGTCACATTCTAATTTCGATATTCTTATTACACAGGCTCT
CAACTTTCGCAAGCTATTTTTTTCAAGTCATAAAAAAAATTATTGGAGTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTCTGCATTTCAGAGTTGAAAATGTTGATAAAATATATTGCAA
ACTCGTGAAAAAAATTGAAAATAATTTTTTTGTGCATTAGGAGTAATGTT
CAAGCTCTTTCAATCATTTTACCTAAACAATTCAAAGAAATAAAATTACC
ACGGAATATTGTCGGATTTTTTATAGCAATTTTGAAATACAGGCGGCAAC
AAAGCTCGCTTCAAAGAGACAATAAAAGATAGATGTCCAGTCGTTTATAT
GTTCATGGACAATGTAACCATACATAGAAACTCTGTAGTGCCCATCAAGC
CTTGCTTAGAAATAAGCAAGTTCAGCACTCGCAAACTTTATTATCTTTGA
GATGACAAATGTTGATTTAGTGGAAAAGATTTTCTGAATTTTTTTTTACT
TTTTGCTAAGTTTCTTTAGTTCTTTCAGTTCCAAGGTGCGCTTTGTTAAG
ATTTTAGATTGAGAATGAGTTTTGAGATTCATAATTTTTAGAAAGTAGTT
TGTTATTTAAACAGTTCAAATAGTTTTCTTTCATTATGCCAGGTTTCAAA
ATCTTGGATTTGAGCCATTAAAAGTTATGAAAGCTCAAAAATCGCTATTT
TCCGCTATTTTGGGGGTATTTTGGTATTTTGCTCAATTTGGCCATTAGGA
TAGCTTATTATACTAAATTATATATAATGAAACATCTATTTTATCACTTT
AAAGCACTTAATAGTGTCTGAAATTGATTCAATATGCTTTAAGCACTGAA
AATCCCCATTTTGAGTATTTTCCGCCTTTTTCGGTCAATTTTGACCTAAA
AACCTATTTTTTTGTAATTTTTATATATGATAGATCTATATTATTGTTAT
ATTTTAATCCTACTTTTTCCCAAGGGACATTATGGACCCAATTTGAGGGC
TGTAATACCAACACAGCAGGTTTTAGAATTTTTTCTCAGGCAAAACCCCA
TTTTTTCGCGTTTTCGGTCATTTTTGGCCTAAAAACCTACATTATTTGTA
TTTTTTATATATGATAGAGCTATATCATTATTACATTCTAATCCTACTTT
TTTCCAAGGAACATTTTGGGCCCAATTTCAGGGCTGTAGCACCAACACAG
CAGGATTTAGGATTTTTTTAAGGCAAAACCCCATTTTTTTGCGTTTTCGG
TCATTTTTGGCATAAAAACCTACTTTTAATAATTTTTATGTATGATAGAG
CTATATGTTTGTTATATTCTAATCCTACTTTTTTCCAAGGAACATTTTAG
GCCCAACTTCAGGGCTGTAGCACCAACACAGCTGGCTTTAGGATTTTTTT
CAGGCAAAAACCCTGTTTTTCGCAAATTTTCGAAAATATCGATTTTACAA
AACCCTGGGGCAAACGGTCAATTTTGAAGATTTTGAATTAATTTTTTCGC
AGAAAGTCTTGAAATAGATTAAATTACCAGAAAAAGTTGTCCAAATTACA
TTTCCAGAAAAAAAGTCAATTTATAGGCTCCACTTTATTTGTTGTAGTAT
TTATAAGAAGATATATTTTACCTATTTCATTAGTTTTGAGACCATTTTTT
AGACTGTTTATAGGCTTTATAGGCTCCACTTTATTTGTTGTCGTATTTAT
AAGAAGATATATTTTAACTATTTCATTAGTTTTGAGACAATTTTTTAGAC
TGTTTATAGGCTTTATAGTAGGGTGTATGATGAAATGACTTTTTTTCAGA
ATTGCACTTTGGACAAATTTTTCTGGTAATTTAATCTATTCTAAGACTTT
CTGTGAAAAAATTAATTCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCTGCTACTCTAGAGTCACCCGTCATCTAACGAAAGGTTAGAAAGTGT
TTATAGGCTTTATAGGATCCACTTTATTTGTTGTAGTATTTATAAGAGGA
TATATTTTACCTATTTCATTCGTTTTGAGACCATTTTTTAGACTGTTTAT
AGGCTTTATAGGCTCCACTTTATTTGTTGTCGTATTTATAAGAAGATATA
TTTTACCTATTTCATTAGTTTGAGACCATTTTTAGACTGTTTATAGGCTT
TACTTGTTTGAATGCATCATCTACCGCGACCCTTACCATACACATTGCGC
AGGAACAGATAATGCATACGCCAGAGTTACGCCACGTTTTGTTTGCGACC
GCTGTATTAAGTCGCGCTTCTTACCGTTTACTGATTACATCGGGTTCAAA
AACGAAGAAGAAACAAACATCGCAGTTTTGGAGTTTCTTTGGAATTCGAA
AGAAAAGGAAGAAAAAAAGTTCTGAAAAGCCATCCTTTATCTTACCAGCT
TATCCCTGCTCTGAAAATCAAAAGGTTGACCCGCTATGGCATAAAGAATC
CCTTCAATAATTGTTGGGTTAACACTGTATTACAAGTTATTTCTGGAAGC
ACCTTCTTTGACTTTCTGTCCAGCTTGTGTCAGCCAAACAATGAGATCTT
CAGCCATCTTGCCACTGTCAATCAAAGATTAAAAAGATGCAATAAACCTC
TTGAAGTCAACGACGGAGTACTAGCAGATTGGACCAAGATACCTACCTCT
TACTTTCAATTAGGCGCTCCCATCTCTAACGTTGAAAATGGCAAAACGAT
AAATTTGGAACACGTTCCACTGAAGCATACGGTTAATATGTTTAAATGAT
TTATTTCTTTAAACTGGATAATAAATTTCGTTGAGGTTTTCGTTTGCTTC
ATTTTTGAGAATATGTTCTCCTTAAATTTCATTTTAGCTCCACTCTCAAC
AAATGCTGGAAATGGCAACATCGCAAAAACACAGTCTACTGCGATAACGA
TAATTTCGGCTTAATTATATTGATTTTAGTTGTAATTTTCATGATAAAAA
TATTATTGAACTTTTTGAAATTTCAATATTCTCCAAATTTCATTTTAGCT
CGTATTTCAACAAATGCTTATCATGACGAAGTCTCCAATTTGGAATTGCT
TGCTGATGAAGCAGACGGTAATTTCGGCTTGATTATATTGATTGTAGTTG
TAATTTTCATGATAAAAATATCATTGAATTTTTTCAAATTTCAATGTTCT
CCAAATTTCATTTTAGCTCATATCTCAACAANCGGTAATTTCGGCTTAAT
TATTTTGATTGTAGTTGTAATTTTCATGATAAAAATATCATTGGCTTCTT
TTAAATTTCAATGTTCTCCAAATTTCATTTTAACTCATATCTCAACAAAT
GCTTATCATGACGAAGTCTCCAGTTTTGAATTGCTTGCTGATGAAGCAGA
CGGTAATTTCGGCTTAATTATATTGATTGTAGTTGTAATTTTCATGATAA
AAATATCATTGAATTTTTTTAAATTTCAATGTTCTCCAAATTTCATTTTA
ACTCATATCTCAACAAATGCTTATCATGACGAAGTCTCCAGTTTTGAATT
GCTTGCTGATGAAGCAGACGGTAATTTCGGCTTAATTATATTGATTGTAG
TTGTAATTTTCATGATAAAAATATCATTGAATTTTTTTAAATTTCAATGT
TCTCCAAATTTCATTTTAACTCATATCTCAACAAATGCTTATCATGACGA
AGTCTCCAGTTTTGAATTGCTTGCTGATGAAGCAGACGGTAATTTCGGCT
TAATTATATTGATTGTAGTTGTAATTTTCATGATAAAAATATCATTGAAT
TTTTTTAAATTTCAATGTTCTCCAAATTTCATTTTAACTCATATCTCAAC
AAATGCTTATCATGACGAAGTCTCCAGTTTTGAATTGCTTGCTGATGAAG
CAGACGGTAATTTCGGCTTAATTATATTGATTTTAGTGGTAATTTTCATA
ATAAAATCTTAATGAATTTTTTGAAATTTCAATGTTCTCCAAATTTCATT
TTAGCTCATATCTCAACAAATGCTTATCATGACGAAGTCTCCAATTTTGA
ATTGCTTGCTGAAGAAGCAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041548XLOC_041548Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066376-exon-scaffold_454-1575043694:77691..77918TCONS_00066376-exon-scaffold_454-1575043694:77691..77918Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1575043694:77409..77513TCONS_00066376-exon-scaffold_454-1575043694:77409..77513Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1575043694:75006..75152TCONS_00066376-exon-scaffold_454-1575043694:75006..75152Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1575043694:63838..64045TCONS_00066376-exon-scaffold_454-1575043694:63838..64045Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1575043694:63502..63570TCONS_00066376-exon-scaffold_454-1575043694:63502..63570Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1575043694:62547..62614TCONS_00066376-exon-scaffold_454-1575043694:62547..62614Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1510915933:77691..77918TCONS_00066376-exon-scaffold_454-1510915933:77691..77918Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1510915933:77409..77513TCONS_00066376-exon-scaffold_454-1510915933:77409..77513Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1510915933:75006..75152TCONS_00066376-exon-scaffold_454-1510915933:75006..75152Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1510915933:63838..64045TCONS_00066376-exon-scaffold_454-1510915933:63838..64045Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1510915933:63502..63570TCONS_00066376-exon-scaffold_454-1510915933:63502..63570Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1510915933:62547..62614TCONS_00066376-exon-scaffold_454-1510915933:62547..62614Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1491911889:77691..77918TCONS_00066376-exon-scaffold_454-1491911889:77691..77918Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1491911889:77409..77513TCONS_00066376-exon-scaffold_454-1491911889:77409..77513Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1491911889:75006..75152TCONS_00066376-exon-scaffold_454-1491911889:75006..75152Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1491911889:63838..64045TCONS_00066376-exon-scaffold_454-1491911889:63838..64045Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1491911889:63502..63570TCONS_00066376-exon-scaffold_454-1491911889:63502..63570Clytia hemisphaericaexon
TCONS_00066376-exon-scaffold_454-1491911889:62547..62614TCONS_00066376-exon-scaffold_454-1491911889:62547..62614Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_454supercontigscaffold_454:62547..77918 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.115563	0.268209	0.130846	0.191395	0	0.142601	0.308558	0.676166	1.06961	1.0203	1.10975	0.822432	0.729858	0.399084	0.60734	0.807998	1.15636	0.482462	0.198145	0.466008	0.482883	0.422651	0.265004	0.109681	0	0.110734	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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