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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066321 ID=TCONS_00066321|Name=TCONS_00066321|organism=Clytia hemisphaerica|type=transcript|length=1125bp
AACGATTTATCTTTACATAGATCGTGGACGGTAGAAGAGAGATGGTTTCT
CCGCAGCATGTCACAGTTAAAATCTCCTAGTATAAAAACTTCCGAGTTCT
TTGGGATTTTACTGAAGCAAGTTATTAAAAATGTCTTATATTTTTCTACC
AACTCTACATTATTACCTTTGATTGGCGGACGGTACAATGAACAAACATA
TATAGATTTAGCCTTTTTCCGTTTTATCTCAACCCAAAGAATTTCAAGAG
CCTTGTTGGAAATATTTGCTTGCTTCTTTGGAGTTAGATGATCAGAAGCA
TAAATGAGGACACCCCCTCCATGACAGCTTCTATCCTGTCTAAAGGTTTT
GTATCCGGGAATAGAGATTTCAGAAGTTGCGACTGATGAATCAATTTTGG
TTTCGTTTAGGCAGAGAATATCGAATTTGTGTTGTTGAAGAAAGATTTTG
AGAAAGGTTATCTTGGAACGAAGACCGTTAATATTCAAGTGTGCAATATT
CAGACTATCTTCTTGAGTCAACTTTAGGTTTTCATTTAGATTCAACTCAA
TAGGTACTTCTTCATCTTCGATGGTTTCAACAAAGTCGTCGTCGGGGAAA
GGTAGAGCGTTAAGATAACAGCTCTGACAAGCATAGGATTTTTCATCTCG
CAAaatctttttatgaaaagttacaGTGATACCAGAGCAGCTCCTATGAA
AGAGACCTCGACACTCAGAACATACTACTGGGTTAGTATTCCTTGCAATA
GTCCGGACACAAAGGTCACAGATCATTTTATTTGTGGTGGAGGGCCCTGG
GTTGGTTTCAATATCTCCAGATAGTAAAAGGACAAGAAAGAGATTTACCC
GCAGAGGTTTGCCTTTGGACAGTATAAAAAGTGATGACATATCGTTTACA
AGATCGAAAGATTCGTGACTAAGATTCGAGGGTTTCTCCGTAGTGGAGGT
GTCATTATTAGATCTAATCATGACAATTATCAAAAGTGAGAATAATATAA
TTACTCTAAGCCTTCGTGATTTAGGTCGCTTTCTTTTGATAAGTACCCTC
TGGGGAGTGTCAATTACGCGATAATTAAGCAATCTGACACCTCTTGATCC
GAAGACTTTGAGGAGTGTTGTGATT Run BLAST on NCBI protein sequence of TCONS_00066321-protein >TCONS_00066321-protein ID=TCONS_00066321-protein|Name=TCONS_00066321-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
ITTLLKVFGSRGVRLLNYRVIDTPQRVLIKRKRPKSRRLRVIILFSLLII
VMIRSNNDTSTTEKPSNLSHESFDLVNDMSSLFILSKGKPLRVNLFLVLL
LSGDIETNPGPSTTNKMICDLCVRTIARNTNPVVCSECRGLFHRSCSGIT
VTFHKKILRDEKSYACQSCYLNALPFPDDDFVETIEDEEVPIELNLNENL
KLTQEDSLNIAHLNINGLRSKITFLKIFLQQHKFDILCLNETKIDSSVAT
SEISIPGYKTFRQDRSCHGGGVLIYASDHLTPKKQANISNKALEILWVEI
KRKKAKSIYVCSLYRPPIKGNNVELVEKYKTFLITCFSKIPKNSEVFILG
DFNCDMLRRNHLSSTVHDLCKDKS Run BLAST on NCBI transcript from alignment at scaffold_451:1455134..1456258 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066321 ID=TCONS_00066321|Name=TCONS_00066321|organism=Clytia hemisphaerica|type=transcript|length=1125bp|location=Sequence derived from alignment at scaffold_451:1455134..1456258 (Clytia hemisphaerica)
AATCACAACACTCCTCAAAGTCTTCGGATCAAGAGGTGTCAGATTGCTTA
ATTATCGCGTAATTGACACTCCCCAGAGGGTACTTATCAAAAGAAAGCGA
CCTAAATCACGAAGGCTTAGAGTAATTATATTATTCTCACTTTTGATAAT
TGTCATGATTAGATCTAATAATGACACCTCCACTACGGAGAAACCCTCGA
ATCTTAGTCACGAATCTTTCGATCTTGTAAACGATATGTCATCACTTTTT
ATACTGTCCAAAGGCAAACCTCTGCGGGTAAATCTCTTTCTTGTCCTTTT
ACTATCTGGAGATATTGAAACCAACCCAGGGCCCTCCACCACAAATAAAA
TGATCTGTGACCTTTGTGTCCGGACTATTGCAAGGAATACTAACCCAGTA
GTATGTTCTGAGTGTCGAGGTCTCTTTCATAGGAGCTGCTCTGGTATCAC
tgtaacttttcataaaaagattTTGCGAGATGAAAAATCCTATGCTTGTC
AGAGCTGTTATCTTAACGCTCTACCTTTCCCCGACGACGACTTTGTTGAA
ACCATCGAAGATGAAGAAGTACCTATTGAGTTGAATCTAAATGAAAACCT
AAAGTTGACTCAAGAAGATAGTCTGAATATTGCACACTTGAATATTAACG
GTCTTCGTTCCAAGATAACCTTTCTCAAAATCTTTCTTCAACAACACAAA
TTCGATATTCTCTGCCTAAACGAAACCAAAATTGATTCATCAGTCGCAAC
TTCTGAAATCTCTATTCCCGGATACAAAACCTTTAGACAGGATAGAAGCT
GTCATGGAGGGGGTGTCCTCATTTATGCTTCTGATCATCTAACTCCAAAG
AAGCAAGCAAATATTTCCAACAAGGCTCTTGAAATTCTTTGGGTTGAGAT
AAAACGGAAAAAGGCTAAATCTATATATGTTTGTTCATTGTACCGTCCGC
CAATCAAAGGTAATAATGTAGAGTTGGTAGAAAAATATAAGACATTTTTA
ATAACTTGCTTCAGTAAAATCCCAAAGAACTCGGAAGTTTTTATACTAGG
AGATTTTAACTGTGACATGCTGCGGAGAAACCATCTCTCTTCTACCGTCC
ACGATCTATGTAAAGATAAATCGTT Coding sequence (CDS) from alignment at scaffold_451:1455134..1456258 >TCONS_00066321 ID=TCONS_00066321|Name=TCONS_00066321|organism=Clytia hemisphaerica|type=CDS|length=1122bp|location=Sequence derived from alignment at scaffold_451:1455134..1456258 (Clytia hemisphaerica)
ATCACAACACTCCTCAAAGTCTTCGGATCAAGAGGTGTCAGATTGCTTAA
TTATCGCGTAATTGACACTCCCCAGAGGGTACTTATCAAAAGAAAGCGAC
CTAAATCACGAAGGCTTAGAGTAATTATATTATTCTCACTTTTGATAATT
GTCATGATTAGATCTAATAATGACACCTCCACTACGGAGAAACCCTCGAA
TCTTAGTCACGAATCTTTCGATCTTGTAAACGATATGTCATCACTTTTTA
TACTGTCCAAAGGCAAACCTCTGCGGGTAAATCTCTTTCTTGTCCTTTTA
CTATCTGGAGATATTGAAACCAACCCAGGGCCCTCCACCACAAATAAAAT
GATCTGTGACCTTTGTGTCCGGACTATTGCAAGGAATACTAACCCAGTAG
TATGTTCTGAGTGTCGAGGTCTCTTTCATAGGAGCTGCTCTGGTATCACt
gtaacttttcataaaaagattTTGCGAGATGAAAAATCCTATGCTTGTCA
GAGCTGTTATCTTAACGCTCTACCTTTCCCCGACGACGACTTTGTTGAAA
CCATCGAAGATGAAGAAGTACCTATTGAGTTGAATCTAAATGAAAACCTA
AAGTTGACTCAAGAAGATAGTCTGAATATTGCACACTTGAATATTAACGG
TCTTCGTTCCAAGATAACCTTTCTCAAAATCTTTCTTCAACAACACAAAT
TCGATATTCTCTGCCTAAACGAAACCAAAATTGATTCATCAGTCGCAACT
TCTGAAATCTCTATTCCCGGATACAAAACCTTTAGACAGGATAGAAGCTG
TCATGGAGGGGGTGTCCTCATTTATGCTTCTGATCATCTAACTCCAAAGA
AGCAAGCAAATATTTCCAACAAGGCTCTTGAAATTCTTTGGGTTGAGATA
AAACGGAAAAAGGCTAAATCTATATATGTTTGTTCATTGTACCGTCCGCC
AATCAAAGGTAATAATGTAGAGTTGGTAGAAAAATATAAGACATTTTTAA
TAACTTGCTTCAGTAAAATCCCAAAGAACTCGGAAGTTTTTATACTAGGA
GATTTTAACTGTGACATGCTGCGGAGAAACCATCTCTCTTCTACCGTCCA
CGATCTATGTAAAGATAAATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066321-exon-scaffold_451-1491911889:1455134..1456258 | TCONS_00066321-exon-scaffold_451-1491911889:1455134..1456258 | Clytia hemisphaerica | exon |
| TCONS_00066321-exon-scaffold_451-1510915933:1455134..1456258 | TCONS_00066321-exon-scaffold_451-1510915933:1455134..1456258 | Clytia hemisphaerica | exon |
| TCONS_00066321-exon-scaffold_451-1575043694:1455134..1456258 | TCONS_00066321-exon-scaffold_451-1575043694:1455134..1456258 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_451 | supercontig | scaffold_451:1455134..1456258 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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