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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066285 ID=TCONS_00066285|Name=TCONS_00066285|organism=Clytia hemisphaerica|type=transcript|length=1112bp
cTACTATACATAAACATAAATATACGTCAAGAAATGAGAGTATTGAAAAT
TTTAGTATAAGATTTCGATGACATGTGTGGTTGATGGTTGATGCGGAAAA
AAGGAACAGATTGAGAGACTTTTTGATAATTGTAAACATCTAGTCAAACA
GCTGCTGTGGCTGTCACTGATCTATATTTGTAGACCTAAATGTGGTGAGA
ATTGGATGATTTTTGTTATCACTGATCTATCAAATATATGTGATTGGAGA
ATAccgaattgaaaaaactttttaaatcgACTTCATTGGGAAGAGAGAAT
TCTACGTGATCAGACAAGAGGACTCTGAAAAGAACTCTTCAAATCGAGAT
TTTCTTGGGAACAGAGAATTCTGCGTAACAAATCAACAAATCGTGACATC
GAGAGGACCTCCCGTAAAATCAacattgtgaacgttagatgtacattgaa
acaacgttgtgtaaaAAACGTTGTAACCAAATTACATTTGCGTGGTATTG
TCCAATACAGTTGACCTTcagaaaaacaaagatcagtgcggTCACTCAAA
TTGACAGAATTATCAAAACTATCTCTTGCGTCGGAGGAACGTTGAGGTCA
AGAGGAGGAGCCACTTTTGATTCTTATAAGATCAAGTTTCAAGAAGAGAG
ATTATACCAAACAAAAACGGATGGTTATCGCATGGTTACAAATTCCAAAT
AAAAAGCTTTAAGAAGTACTCTTGTTGAGTTAGTCTCGGATAACATTTTT
TGAGAATTAGAAAATTGGAAATTGTCTATGCATTAAATTCCGTTGATCCA
GAGATCTATACGAGAACTATAAACAAAAAGCACCTTATCTGGCCAATGAA
TATTGAAGAAAATTGAGGAACGCGGGGGGTTGCCAACCAGAAGGAAAACC
TCAATCCTTATCTATTGGAGTTCAGCCAAAAAATAtttaccaacattcaa
tttaaaGATTACAGATAAAGTACACCAGAGTATACCATAAGTGGTATTCT
GTTTAAAGAGAGTGTTTGATAGATGCATAAAGGATTGAAACGCGATAAAA
CAGATTACTAATAGGCTTACAAAGTACACTGGATTTTGATTTTAAGCGTC
GCCAacgaaaat Run BLAST on NCBI transcript from alignment at scaffold_451:619085..620196 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066285 ID=TCONS_00066285|Name=TCONS_00066285|organism=Clytia hemisphaerica|type=transcript|length=1112bp|location=Sequence derived from alignment at scaffold_451:619085..620196 (Clytia hemisphaerica)
attttcgtTGGCGACGCTTAAAATCAAAATCCAGTGTACTTTGTAAGCCT
ATTAGTAATCTGTTTTATCGCGTTTCAATCCTTTATGCATCTATCAAACA
CTCTCTTTAAACAGAATACCACTTATGGTATACTCTGGTGTACTTTATCT
GTAATCtttaaattgaatgttggtaaaTATTTTTTGGCTGAACTCCAATA
GATAAGGATTGAGGTTTTCCTTCTGGTTGGCAACCCCCCGCGTTCCTCAA
TTTTCTTCAATATTCATTGGCCAGATAAGGTGCTTTTTGTTTATAGTTCT
CGTATAGATCTCTGGATCAACGGAATTTAATGCATAGACAATTTCCAATT
TTCTAATTCTCAAAAAATGTTATCCGAGACTAACTCAACAAGAGTACTTC
TTAAAGCTTTTTATTTGGAATTTGTAACCATGCGATAACCATCCGTTTTT
GTTTGGTATAATCTCTCTTCTTGAAACTTGATCTTATAAGAATCAAAAGT
GGCTCCTCCTCTTGACCTCAACGTTCCTCCGACGCAAGAGATAGTTTTGA
TAATTCTGTCAATTTGAGTGAccgcactgatctttgtttttctgAAGGTC
AACTGTATTGGACAATACCACGCAAATGTAATTTGGTTACAACGTTTttt
acacaacgttgtttcaatgtacatctaacgttcacaatgtTGATTTTACG
GGAGGTCCTCTCGATGTCACGATTTGTTGATTTGTTACGCAGAATTCTCT
GTTCCCAAGAAAATCTCGATTTGAAGAGTTCTTTTCAGAGTCCTCTTGTC
TGATCACGTAGAATTCTCTCTTCCCAATGAAGTcgatttaaaaagttttt
tcaattcggTATTCTCCAATCACATATATTTGATAGATCAGTGATAACAA
AAATCATCCAATTCTCACCACATTTAGGTCTACAAATATAGATCAGTGAC
AGCCACAGCAGCTGTTTGACTAGATGTTTACAATTATCAAAAAGTCTCTC
AATCTGTTCCTTTTTTCCGCATCAACCATCAACCACACATGTCATCGAAA
TCTTATACTAAAATTTTCAATACTCTCATTTCTTGACGTATATTTATGTT
TATGTATAGTAg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066285-exon-scaffold_451-1491911889:619085..620196 | TCONS_00066285-exon-scaffold_451-1491911889:619085..620196 | Clytia hemisphaerica | exon |
| TCONS_00066285-exon-scaffold_451-1510915933:619085..620196 | TCONS_00066285-exon-scaffold_451-1510915933:619085..620196 | Clytia hemisphaerica | exon |
| TCONS_00066285-exon-scaffold_451-1575043694:619085..620196 | TCONS_00066285-exon-scaffold_451-1575043694:619085..620196 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_451 | supercontig | scaffold_451:619085..620196 . |
Blast
The following BLAST results are available for this feature:
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