Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066229 ID=TCONS_00066229|Name=TCONS_00066229|organism=Clytia hemisphaerica|type=transcript|length=1174bp
AGAATTCgagatttatatatttttaatataaaactttttttacaaagttt
CAATCGATCAGGGGGTAGTGAAtattaaatctttttaaatAATACAAAAG
Cattaacgaaaaaaaaaaattctaattggattatcaaaaaatattagaaa
acaAATTTAGTTCTAATAATTACAAGAAAATACAGAATTACAACTTTTAC
ATCAAACAAAAAAAGGAGCATAAAGGGGAAAAATTCAACTTTAATATAAA
ATATTTACAGCAGGGGGAGTAAATTAGCAGATTAAATCATTagaaaaata
aactattacatcaAATTAAAATAAGGTTTAATCAACTATGAATAATTact
acaaaaaaaaagaaaaaaaaaactatacaTGAATTAAaggcaagaaaaaa
atttaaattgccttaaaaaacttttttttgcactaaaaaagttgataaaa
acatataaaaactGTCAAAATATCTCTCGCATGTGACCTAGCCTAGATAC
AACGCATATAGCTAGGAAGCCAACAATATACAAAAGTGAGAGAAaataaa
aatgcactttttatcaaaatgcaTTTTATCTAAAGAGAATTAAAACCctg
tttttcatttaaaatacaGTTTAATCTCACTGATGCATACAAACTTGATC
AGCAACAAAAAACTGTATCCTTTAAGAAAATTAttgcaattcaaaaaata
ttgtattcagaaaagcgaagaaattttataattttcattaaaaatcctaa
aaaagaagaaaggttTTGCACCATAGGTAAGTAAAACTGAGTCAATAAAt
tcgagaaaatttcaaactctagTAATGCACTTGTGCGGTCCCAAAcaaaa
attgatccaaatttggCCACACTAATTCCTTATTAGGAAATCTTTTCACC
AAATAAGGAAATGAATACAACCAAATAtggtcacgtgatttctttgtttt
ggatCGCACATGAGCATTTGCAGAATTTGAaataaatctcaaaaaaatta
taaaaatataaatccgAAGGAATTATGAGCAAGCAATGATgataaaaaac
taatgagaaaatctttcaaataaatCCAAATTTGAACAAGAAAACCCAAT
GTATaaattttatttggaaaataaCTTTGAAATGAGGCATTTTACACTAc
agcacgtttttttataagaacaaa Run BLAST on NCBI transcript from alignment at scaffold_451:446758..448023- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066229 ID=TCONS_00066229|Name=TCONS_00066229|organism=Clytia hemisphaerica|type=transcript|length=1266bp|location=Sequence derived from alignment at scaffold_451:446758..448023- (Clytia hemisphaerica)
AGAATTCGAGATTTATATATTTTTAATATAAAACTTTTTTTACAAAGTTT
CAATCGATCAGGGGGTAGTGAATATTAAATCTTTTTAAATAATACAAAAG
CATTAACGAAAAAAAAAAATTCTAATTGGATTATCAAAAAATATTAGAAA
ACAAATTTAGTTCTAATAATTACAAGAAAATACAGAATTACAACTTTTAC
ATCAAACAAAAAAAGGAGCATAAAGGGGAAAAATTCAACTTTAATATAAA
ATATTTACAGCAGGGGGAGTAAATTAGCAGATTAAATCATTAGAAAAATA
AACTATTACATCAAATTAAAATAAGGTTTAATCAACTATGAATAATTACT
ACAAAAAAAAAGAAAAAAAAAACTATACATGAATTAAAGGCAAGAAAAAA
ATTTAAATTGCCTTAAAAAACTTTTTTTTGCACTAAAAAAGTTGATAAAA
ACATATAAAAACTGTCAAAATATCTCTCGCATGTGACCTAGCCTAGATAC
ATCGCATATAGCTAGGAAGCCAACAACATACAAAAGTGAGAGAAAANTAA
AACTGTCAAAAATATCTCTCGCATGTGACCTAGCCTAGATACAACGCATA
TAGCTAGGAAGCCAACAATATACAAAAGTGAGAGAAAATAAAAATGCACT
TTTTATCAAAATGCATTTTATCTAAAGAGAATTAAAACCCTGTTTTTCAT
TTAAAATACAGTTTAATCTCACTGATGCATACAAACTTGATCAGCAACAA
AAAACTGTATCCTTTAAGAAAATTATTGCAATTCAAAAAATATTGTATTC
AGAAAAGCGAAGAAATTTTATAATTTTCATTAAAAATCCTAAAAAAGAAG
AAAGGTTTTGCACCATAGGTAAGTAAAACTGAGTCAATAAATTCGAGAAA
ATTTCAAACTCTAGTAATGCACTTGTGCGGTCCCAAACAAAAATTGATCC
AAATTTGGCCACACTAATTCCTTATTAGGAAATCTTTTCACCAAATAAGG
AAATGAATACAACCAAATATGGTCACGTGATTTCTTTGTTTTGGATCGCA
CATGAGCATTTGCAGAATTTGAAATAAATCTCAAAAAAATTATAAAAATA
TAAATCCGAAGGAATTATGAGCAAGCAATGATGATAAAAAACTAATGAGA
AAATCTTTCAAATAAATCCAAATTTGAACAAGAAAACCCAATGTATAAAT
TTTATTTGGAAAATAACTTTGAAATGAGGCATTTTACACTACAGCACGTT
TTTTTATAAGAACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066229-exon-scaffold_451-1575043694:447524..448023 | TCONS_00066229-exon-scaffold_451-1575043694:447524..448023 | Clytia hemisphaerica | exon |
| TCONS_00066229-exon-scaffold_451-1575043694:446758..447431 | TCONS_00066229-exon-scaffold_451-1575043694:446758..447431 | Clytia hemisphaerica | exon |
| TCONS_00066229-exon-scaffold_451-1510915933:447524..448023 | TCONS_00066229-exon-scaffold_451-1510915933:447524..448023 | Clytia hemisphaerica | exon |
| TCONS_00066229-exon-scaffold_451-1510915933:446758..447431 | TCONS_00066229-exon-scaffold_451-1510915933:446758..447431 | Clytia hemisphaerica | exon |
| TCONS_00066229-exon-scaffold_451-1491911889:447524..448023 | TCONS_00066229-exon-scaffold_451-1491911889:447524..448023 | Clytia hemisphaerica | exon |
| TCONS_00066229-exon-scaffold_451-1491911889:446758..447431 | TCONS_00066229-exon-scaffold_451-1491911889:446758..447431 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_451 | supercontig | scaffold_451:446758..448023 - |
Blast
The following BLAST results are available for this feature:
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