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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066177 ID=TCONS_00066177|Name=TCONS_00066177|organism=Clytia hemisphaerica|type=transcript|length=936bp
TATTAAACCCATGCAATTTCATCGTCTGAAGGTTGACTTGGAGAATCAAC
ATGGAATATTTGTTGAATATGTTAATTCGATTTTTGTAAgtaatcatttt
ttttctgattgttATGGATTGATCTtgtaaaatcttccttttcatgTAAG
AATAAGAATATTTAGTaagaatatctttttcattttcatttgataGTCTT
CTCAAAGAGGTTATCAAACCACGTGACATCAAAGCATCATTCATCGATGA
ATTTGACATTtggatattttcaagttttacatAATCGGTGTTTAATTATT
CATTTCATAGACTCGGAGAGTTCGTCTTGTTGAGATGATCAAAAGACGGG
ACATCAAAGCATTGTTCATCGATGAATATGAAATACGGCCACAATACAAA
AAATGGATAAGGAAGGAGGTGATGCCACTCGTTGACTACTTATGGATCGT
CCCATCGACAGGCGACTTGAGTGATGGAAATTACCAAGAAGTTTCAACTG
ACTTTTTAGTAGTCAATCTTGAACAGAATTTCAGGAATTCTCAACAAATT
GTCAAATCAACCAAATCAGTAGCCGAGGAGCATGATTATGACTACAAACA
AGGGATCGTCATGCCACTTGGTAATTCCCCGGATGGTTGCGAGCCAATAT
TTGTTGACACGTTCGAAGAAGCAGTGAAAGAAGCGAGAAAACGAACAAAT
GAAGGAATCATTGTGATAGCTGATAGTTCTGAATTCCATGCAAATTATTA
TTGTGACGTTCTAGATCGGTTGAACGAGAATTATAAAAcatatgaaaaac
aaaaaaatgattttaaagatgGAGAAAATCCGTATACGTTTCTTCAGGAA
GGAAACATTTTGATCATTGATCGAGAGACACCTTTTGGATTTGACTGGAC
GACAGTTATTGTATCTGGACAAAAGCTTACCAACGC Run BLAST on NCBI transcript from alignment at scaffold_451:980560..981495+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066177 ID=TCONS_00066177|Name=TCONS_00066177|organism=Clytia hemisphaerica|type=transcript|length=936bp|location=Sequence derived from alignment at scaffold_451:980560..981495+ (Clytia hemisphaerica)
TATTAAACCCATGCAATTTCATCGTCTGAAGGTTGACTTGGAGAATCAAC
ATGGAATATTTGTTGAATATGTTAATTCGATTTTTGTAAgtaatcatttt
ttttctgattgttATGGATTGATCTtgtaaaatcttccttttcatgTAAG
AATAAGAATATTTAGTaagaatatctttttcattttcatttgataGTCTT
CTCAAAGAGGTTATCAAACCACGTGACATCAAAGCATCATTCATCGATGA
ATTTGACATTtggatattttcaagttttacatAATCGGTGTTTAATTATT
CATTTCATAGACTCGGAGAGTTCGTCTTGTTGAGATGATCAAAAGACGGG
ACATCAAAGCATTGTTCATCGATGAATATGAAATACGGCCACAATACAAA
AAATGGATAAGGAAGGAGGTGATGCCACTCGTTGACTACTTATGGATCGT
CCCATCGACAGGCGACTTGAGTGATGGAAATTACCAAGAAGTTTCAACTG
ACTTTTTAGTAGTCAATCTTGAACAGAATTTCAGGAATTCTCAACAAATT
GTCAAATCAACCAAATCAGTAGCCGAGGAGCATGATTATGACTACAAACA
AGGGATCGTCATGCCACTTGGTAATTCCCCGGATGGTTGCGAGCCAATAT
TTGTTGACACGTTCGAAGAAGCAGTGAAAGAAGCGAGAAAACGAACAAAT
GAAGGAATCATTGTGATAGCTGATAGTTCTGAATTCCATGCAAATTATTA
TTGTGACGTTCTAGATCGGTTGAACGAGAATTATAAAAcatatgaaaaac
aaaaaaatgattttaaagatgGAGAAAATCCGTATACGTTTCTTCAGGAA
GGAAACATTTTGATCATTGATCGAGAGACACCTTTTGGATTTGACTGGAC
GACAGTTATTGTATCTGGACAAAAGCTTACCAACGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066177-exon-scaffold_451-1491911889:980560..981495 | TCONS_00066177-exon-scaffold_451-1491911889:980560..981495 | Clytia hemisphaerica | exon |
| TCONS_00066177-exon-scaffold_451-1510915933:980560..981495 | TCONS_00066177-exon-scaffold_451-1510915933:980560..981495 | Clytia hemisphaerica | exon |
| TCONS_00066177-exon-scaffold_451-1575043694:980560..981495 | TCONS_00066177-exon-scaffold_451-1575043694:980560..981495 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_451 | supercontig | scaffold_451:980560..981495 + |
Blast
The following BLAST results are available for this feature:
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