TCONS_00066153 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066153
Unique NameTCONS_00066153
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1959

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066153 ID=TCONS_00066153|Name=TCONS_00066153|organism=Clytia hemisphaerica|type=transcript|length=1959bp
CTTTGTTGTTCACCTTCGTGCTGGCGccgttttgaatgattttttgatat
ttttctttactttttgtgCGTGTTTTTAGTATTAGATGTTTCAAGAAGAT
GAGCGATAAAGAAGAAGTGTTTTGTGTCTGTAAGAAGCCATACGAAGATG
GGCAATTTATGATTGAATGCGGAAAATGCAATGGATGGTTCCACGGAAgT
TGTGTTGGAATTGAAGAATACCAAGCTGCCGACATTGATATTTATGTTTG
CCCAAAATGTCAGCCAAAACATGGTCCACTTGTCTACTCCTTCCTAGATG
CGACTTGCTCCGATGGTGGCTTGGAAGTAAAGAAGCGAAGAAATATAGCA
CGTCACAATTACAAAGAGATCCATGAAGGCACCAAGcaaatAACTGCAGG
GACAGTGATGTTTGTCCGCCAACTAAAGGCTAGGAAGTTCAAAGAgccta
cagaagaTGTCCTCACTACTTTGCCAGATGGCACCGAGCTCAATGGGAAA
TTTTTACACGAGAACGGTTTTGACAAACCAATGGTTATTCAAGAGAAATC
TGGCCTTGGAATTACTGTACCCCCACCAAATTTTACCATCTATGATGTAG
AGAAAAGAGTTGgttCAATGCATGAGTTACATGTTATTGATGTTGCAAGA
CAGGAGGATTTGCGGATGAAAATGAGAGAATGGACAGAATATTACAACAG
CCCTGTACGTGGGAAAGTCCTCAATGTTATTAGTTTGGAGTTCTCAAAAA
CAAATATGGCTGAACTAGTTGAAGCTCCTGAAATTGTCCGTAACATCTCG
TGGGTTGATAACGCATGGCCCAAAGAGAAGAACAGCGAAGATCCGCATAC
CAAACCGATCGTAGCAAAATACTGCTTGATGAGTGTCAAAGATTGTTACA
CAGATTTTCATGTTGATTTTGGTGGGACGTCTGTATGGTACCATATTGTT
CGGGGTGAGAAGATTTTCTACTTCATCGAACCAACGGAGGAGAACCTAAA
GAAGTATGCGCAATGGGTGTCATCCTCAGATCAAGGCCAAGTGTTCTTCG
GAGAGAAAGTCGACAAATGTTATAAAGTGCGTTTAACGCAAGGAAACACA
CTTATATTACCCACAGGATGGATCCATGCTGTGTTGACACCAAAAGATTC
TCTAGTCTTTGGTGGAAACTTTCTTCATTCATACAACATTGCGCTGCAAC
TAAGAATCTACGAATTGGAGAAGAGTTTGCACACacctttgaaatttctt
ttcccaAACTTTGAAACAACAAATTGGTTTGCCGCAAGATCTATACTTAG
GAAAATCAGAGAAATTCACCAGGGAGGATACAGGCTACCCATATTCCTTT
ACAAAGGAGTGGAAACCATGTTACTGGCTTTTCGAAAGTGGACCAAGAAA
CAAGATGAATTCGCCAAGTTTCACAAGCTTCAAATACCGTTGGAGATGAA
CGCGCAGAAATTGATGAAATCActcgaaaaagaattgaaaatggACATTA
AAATGCTGAAAGACTTCAACACAGAGGAACTCCTATCACCAGCAGTCTAT
GGTTCTGAGTTGGTTGTCAACAAACCTAATATTATTCGATTGAAATTCAA
CCGGACCACTCGTAATAGGGCTTCGGCCGCTGAGAGCCAGAGCAATAGTA
GTGAGGTTTCAAGTCCAGAGAAATTAGATCATGCAAAAGGTTTAGAACGT
TTAAAGAAGAAACGAGACAAACTGAAGAAGATGAAAGAAGAGTTAGAAAA
CAAGCGCACGTTACCCTCCATCAAATTGAACTTGAAAGAGGGTGGAAGTG
TTTCCGTCAAGAAATACGAAGAAGATGATGACGAGTTAGATGTCACTGAA
CCTCGACAAAGGTGATTTATAGACCATAAAAACTCTATAtactttcgaac
caatcacatgTGGTTGCCTCCCACAAAAAATGCAACGGATCCTAAAGGTT
GACCCCTAC
Run BLAST on NCBI

transcript from alignment at scaffold_451:490692..507515+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066153 ID=TCONS_00066153|Name=TCONS_00066153|organism=Clytia hemisphaerica|type=transcript|length=16824bp|location=Sequence derived from alignment at scaffold_451:490692..507515+ (Clytia hemisphaerica)
CTTTGTTGTTCACCTTCGTGCTGGCGccgttttgaatgattttttgatat ttttctttactttttgtgCGTGTTTTTAGTATTAGATGTTTCAAGAAGAT GAGCGATAAAGAAGAAGTGTTTTGTGTCTGTAAGAAGCCATACGAAGATG GGCAATTTATGATTGAATGCGGAAAATGCAATGGATGGTTCCACGGAAgg tgaatgtttttttttttgttgttggttGCTGATGATCAATCATCAACATA CAACATTTGACTTATCTAAAACCACTGCTTAAACAAGCAAGCATGCCAGC ctcaaatttcttaaaatttggaaTCTTTTACAGCTTGTTGGTACCAAAAT TGTTTTTCAGAAATCAGAAAAGCAAAAGGGGGAAactttttccttaaatt ttccAGGCAGAATAAAGTCATGCAGCTTTTGGgaaatcaaatcaaaagca aatctttcattttttgtgaactttgaaccctttttaaatttttctgtgCT AAAttgttccggtttttactaaaagaaagcctGCAATCTTAGTTTTCCAG CACTATATATATAATACTGTTGACTTTTGCTTTTCCAAATTGGAAGATCG GTGTTAAATCAGGGGAATTTTCCCGCGAAATCTGATTAgattagaaactt tttttgggaaatccGGTTTTTGTCTCAATTGttccaaaatcaggaaattt tgccattccaTTTATTTCAAaacctgaattttttttcagaaaattaggaa atttttgGGAATGCGGGAGATGCGagagaaaatgttgaaaatgcgAGAGA TATGGCTGAATTTTCCCACGAGAGAAAACGTTGGTATGTAATGCGGGAGT CTTCCGCCCAAATGCGGGAGAGTTCTTCATTTTCGTTTCACATTTCTttg gcggtcatcgaaaaaatgctctgtttgcgttccaacgggtgttaaaaatg caagtgggcggacgggcggtcaaaaacattccctggttttttttaatcac gccagtaactcaggggcgggtggtaacgcgagcaaaacaatttttcaatg gttgtcagagcaattgagaaaaaagctataccgtgagaggtcctaaatcc aacagccctggctaaatccgatggggtctttcaaagatacaaactataaa ataaaaacaaacctttcgctgtgacgctaTGAAGATgtcaaagtgtcaac taaactgagagatttgatacactgaaccaaatgaaccaaaacattaattg cttcttatacaaaacataattttttattacaaaattgttaacgtttaaaa cacaagcaacggattcagaataatagaggtagctcacactttttttatca cattaattgacatcttgacattttagtcatcttgttagatgtttattttc gagagttcttgcaatatagtttattgttcaacttggagagggaatgtttg aaaacatagaattttttcatagcagttatttggggggtcggatttaggca gggctgtcggatttaggaccactcacggtactttaaaaagaacaaattgc ttttcccagatttttttccgcatatCTCCGCActggaaaatcagcggaaa atttgatgcgggcgggtgacgcgaatagaacaatttttcgatgaacGCCT TTTGGGCTAGACGGAAAATTGGTAAATTGCATTTGTCTGCAGCAGACAGA AAATTGTTGCAAACATCCATTAACAAAATgtctctggaaatggaggaaaa gaAATTAATGTTGGAATAAATCAGAAAACAGGTgaggaatagaccttttg ctagtctGGGTGTCATGTTGAATatttaaaaactccagcatcaaaacaat ggaacCTTATCATAATTATCATAAGTGtgcattcattttttcttatCCCT GTGCTGGTGCTGGAGTtttaatttcgacatccttctttaaagatatgAAT CATAgaaaggtcggaatcgctgattgaaattttttttttgctaagcaATC AGGTGATTCTGACCTTAATTAtttctatctctaaagaaggatgtcgaaat tagaagagggatgtcgacattagaccaagttacggtatccTTTACTCTCG aaattttttcttccatttccagaggccacACCTACCATCTTTTTTTTAAC GACTCATCTTATGTCTCAAactcaaccttttccaagcattagaaaaagag atatgaaaaattaaagcaaccactggaaatttttttctttgtcaagtTTT TTCCAAGCTgttttttcctaatctttttgtttacatttttagaCAAATTG TTGAACTAAAACATAGCATCAGTCCccccttattttttttttgggggggg ggggctaagaaatatatttttggcttttaaagagcctgggggctaaaatt accaaaatattcggggggacctagattgttggggggagcAGATGATTtga ctgagactctgggggctATTCAGCTTatttcaaaagatctcttatctcag gggggggtcagtactaaaatgtaagacatacatgagtactaaaaggattt tcGCTAATTTTTAACATACCCCCACCTATTTTTCGAAAATGTTATtttag tacacatgtactaaaattattttgagcaatttaacatagataccacccat tttttgcccttttacgggtttaaatttaccaaaatggggtcattgttaca aacctagtcgaatttagcgcatcaatctgcaaaataatatgattttatta ctaaactgtgctaaACTGTAcatacaaatatttttaaaaaatatttaaaa aattggaaaaactctgaaagatttctgaagattttttcgaaaattcctga aaaaaaaaatcaaatttttaccaaaattgttaaaaaaatgctccattttg gctgattttagaacaaaatactaagatttttcaaatatttctttaaggga ccaccctttttggtattttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNagtacacatggtactaaaattatttttga gcttttttgcagtaccaccacgtcactaaatgtcatgatgtctgagattt tagtaccgaccccccctgcttatcttactattaaatcaaatataaaaagc aaaagatttgtaaacataaatattaaaatacaagtaaaatttagttttca tttatcagtactgtactcgcatatattttttattgacttctctctacggg ggcgggagaacaatgtttttgttttagtttatctTGGGACCTTAAgtgtt aggggacctagcacaaggcaatttttttgggggagctaaattgtttTGGG GGGGACCTTGctttgttggggggagctagaaacctggctaAAGCTATGTA AAATTTGAATGAACATATTCAAAATGAACCAACAATGGTGACATTTTATT TCTGacaatttatatattttgatttaCGATCATCCTCAGgtctaaaatca ataaaaacaagaattaaaatccatttaaaaattttttatcgatataaaat tataaaatttgaatatctttaaaacCACCTATCCACATATGGAGGCCTCA GACCCCTTATTTtcttcaaagctctacaagaggGGTTaggttttttaaaa aatgagtatttgaaaacatttctgGTGTAGCTAAATCAGTGGAGGATGGC AATTATTAgaattattgctctttttggcATATTTGCtgaaaacaacaatt ttaaTGATGAATCNAATTATTAGAATTACTGCTCTTTTTGGCATATTTTG CTGAAAACAGCAATTTCAATGATGAATGAAGTTGGTCAAACaagcaaaag ttttttaataGGATCACTATCTACTGATAAATTTTGGTCTTCAAATTTCT GGCCTAGAAATCTCAATATAAAACTGGCATGGgataaattttaagatttc ccTACCTACCTTTACTTTTACTGTCTCCTTGTAAAAGTCAGTAATCGTTA ATTTCTCTAAAACTTATAAATTTCATTCTTGCGTTAACTACAGCCCTTGT AATGTTCTGACATCAGGTCATATTTAGAAAAGGCAAGGcaaattttttta ccaatattttagtaatttcaggaGTGCTGCCGATAACTGGACACTTAAAG GGCATGGAAAATGGCCTGGTCATTTCTGGTTATTAATTTGGGATTATTAA TTACTTTTTTCTTAATAGTTGTGTTGGAATTGAAGAATACCAAGCTGCCG ACATTGATATTTATGTTTGCCCAAAATGTCAGCCAAAACATGGTCCACTT GTCTGTAAGAAATTactgttttaaaaatattttgatgccATTTGTAGCAT TTTACTTGTTATTTGCAGTCGTTTTCTGAGTGTATTCGTCTAGTTTCCAA TGCAATGGAATACTAATCAGTTTGATTAATAAGACTTTTGAAATATCCTA AGATCTAGACATTTTTAGACACAATTATCTTTATGTATGAGTTTGTCCAA ACCAATCTTGTTTTATTTTGAGGAAACTTAGAGAAATCTAGATTTGTACT AGTTAGATCTGACTAGATGTATAAACTCTTTTTTTTGTTCCTAGAAGTTT TATCAAAATGTTgtataattaaaatttttcatatttccaaCAGCAAGCAG CAAAGATAAACAGTCCAAAAAGCAAGGTCAGACTTGTAGTTTGATTGATT TTGCTAGAATTATCAACATAAGGAAAAAGCAAAAAGGATAACATGATAGT TTTCTCAAGAAAATAGTTGAAAGCTTTGTTTGAAGATTATCAGAATTTCT CAGAGGTTTACTTACTACTAAAGACTGTAAGTcataccataagttggtct aatgttgacatctcTCATCTAATTCACCTATCCACTCTTAGCAAAATTCC CACCAAAGCTCTAGAGACTTTTTCCCAAGTCGCTGCCGTGAAGGGTAAAC TATTTTTGGCCTTCTAGTAGCTCAACTATATTGGTCTTACTTTATTGCTT CAATGCAAGGGTATCTTACCTTTTTCACAGAGCACTCCTACACCTGTGTT TTTATAACTTCGCCGAGAAgaattttccttgtattttcgtTACCAGTCTC TGACTACGCTGTAATAGTTGATAGGTGTACTCCAACAACCTTTTTAGGAA TTGGAAAATAAGACCTTTGGAATCGCTGATGGTTAGATAGGAAAATTTAT CTTGCCCATCAGTGATTCCAACCCTCCTACtattcctatctttaaagaag gaaGGGATGCTGTCATTAGACTAACTTAGGATACTTCAACATTACAATAA AATTTGCACTCAGCTTATTTACAATGGAAATTGAGTCTTTCTTGTTAAGA AGAGATCCCTTTTTTCTTGCATTAGACTCCTTCCTAGATGCGACTTGCTC CGATGGTGGCTTGGAAGGTATCGTTTTTCTTTAGTTGCCTCTTCACTTGT GTTCTTCCACAAAGAAACTCATGCACTTATTAGATAAAGAACTTTATAAT TGTTCAgatatttataaattttgaaagaatgcaATAAGTATCAACCCAAT TCTGCTAACTCTGAATCAACTTtgtctaaaaaaaataaaaaataaataac acagtatttttcgattttggtaTCACTGTTCTTAAACCAAGCCAAAAGAA ATGGTccaaaatctatttcaaaattattaaatttagtctaagaaattttt ctagtttttaattcatgatatgcaccactgcaatggcttcatgcaacttt tctgtttttcttccaCCCAATacttcactttttctattgtttaagtgctg ttaagtgacgtattgggtgcaagattttaaagttctcagaagactctcta gtggtgtatatcatgaatatatcTTAAAACTTTGAAGCCTGACCAAATCT ATGATATTTTAGAGATTTCTAATGTTATAACTCTGTTGGCAAATGTAATG AGATCTTTTCTCTGTCACTATCCAATGCTAGCATGAGTTTCTTTGGAAGG ACATTATTTAAGTTTCAAAGCATTTCATGTGAAAAGTGATATCAATAACA GCTGCTAAAAGAACCTATAATATTGCTCATCAAGTCTCAAAAagataaat ttcatttttcgattcataaaaatacctttttcacATAAAGTGCCTTggct atttattttttttcaattttttaaagttttagtcTTTGTGAAGTCTTACT ATCAACTACTGACTTATTTACAAAACAATGCACACTTATTCACGACCCAC TCACATACATACGTACACAAAATCTTACACAAAAACTGACGCTCTATAAT ATTAACATACTTATTTCTGAGAGTTTCCTCAATTTAAAGCAAGATTAGGT AGTTTCTCTTAGGCtaagtttttattttgacaatGCAGCCTCGAGGATAA CTACTCGAATTATTTCATTGGATTCAATTTTCAACAAGAAAATTCAGTGT TTCAGTTTATTTGAATTGCCTTAAtatgactgcattgatataccttaatt aagggaacttattttggcaagaactaattttggcaaaattggcTAGCAAA CTCAAACttcgccaaatttagttcccaCCAAGATTAATTTtttcgccaaa ttaagttctcacaaaaattaaaaaaaaaaccttgtttgctaaaattagtt ctcgccaaaattaacaattatttttgaatcgaccgttcgtcaaaattagt tcttgctaaaaaaagttccctttttaTATGAAATTGAGTTGTTCCATGAT AATTGATAAAGGATGagaaattttggtccatttagACAGCTTTTCAAGCA GcaagtttgatttattttgcttttttggTTTTAGTAAAGAAGCGAAGAAA TATAGCACGTCACAATTACAAAGAGATCCATGAAGGCACCAAGGTAAAAA AAATGATCTTGATTCTTTACAATGTTTTgattacacgtcttttttttata gttttaccaagcagcctcgatGTTTCTTAAGAAATCGACCTTTTGAGCCT TAAATGTTTCTTACATGTTTCTAAACTTTTTGACATAATTAGCCTTGATT GGAAGGTTCTTATAAAAAATCGAATCAAAAAATGTTATTTTctcattctc agcctcagcatgtttcttagatgtttcttagtttttaggcattctgagcc tcatgtttcttaaaagtgtgtttcttaaaaaaaaaaagacgtgtatataT GCATGAGTTACCTGCAATGCCTTATTATCAGTTATTATAGAGTTTTGGCT AAAAATAATTGAATGAAATACAAAcaattttcattatatttttcatGCTT TGCAAATCCCCATTTCAAGATTGACTTATATTGATGTAATTTTAAAAATC TCAATAAGATATACTCATTACTCATTATTTTGCAGATCACACACCGTATT GATTAGTTAAGATTTGTATTTTTGCCGAAGCAATAAGCTAAGCTTACGCT GGCTTGGCGCAATAATCCAATTTACCAATTTAATGGCATTGGCCATACGT TAGTCCTGCCCAGCACTGTATTATTACTGCACtgatctgtttttttttat tttagcaaatAACTGCAGGGACAGTGATGTTTGTCCGCCAACTAAAGGCT AGGAAGTTCAAAGAGTACGTATCACTTTTTTCAAACAATGTAAAAACATA AACCAAGTTTAACATGACCtctttatgacgtcatttataATACAAAGCTA CTTTAACAACAATTTCCCATCCAAATCTtaaggcaatatattgaaaagtt gtccgcaatatattgtcagcttgatttgcaatttttctaacAATATGGGG GATtatttgaagaaagaaaattcctttttataatagagcaccTGTTATAT ATTTACTTCGTACATGCTACGGTCCGAAAGcgatattgtcaaatattgtt tgTTGTCTGTTGTTCTTGGTGTTACAAGACAGTTTGCAATGGTAAATGGT ATGTAAAGGGTAAAAGTGACAAGATATCATATCATagctgaaaaattcaa tttattttccttttccttcctttaggcctacagaagaTGTCCTCACTACT TTGCCAGATGGCACCGAGCTCAATGGGAAATTTTTACACGAGAACGGTTT TGACAAACCAATGGTTATTCAAGAGAAATCTGGCCTTGGAATTACTGTAC CCCCACCAAATTTTACCATCTATGATGTAGAGAAAAGAGTTGGTATGTTG AACAATATctttaaaaaggtttttccaGACAAGAAATAACTAGGTAGATT GTTTCTTAAGGGTAGGAGAAGACTAAGTTATTTCTCTTTAACTGTGAATG CAATCGTTTGTTTTCTATTCTATACCATGttcaatgaacaaaaatacttt tttcattttaggttCAATGCATGAGTTACATGTTATTGATGTTGCAAGAC AGGTTTGTGACTTATCATATTATCCATTGTACAACTTTTATACTAGTATA AAAGCCTTTAAATCATAACATTTTCTGACTCTCACCCCTACCAACATTAC ACATATTtgtgaaattttcctattttctccCTGTTACCATcaatttgaaa atagaatattcatgatatgcaccactggagaggcttctgagaactttgaa aattttccacccaatgcgtcacttaaacaatagaaaaagtgacgttttgg gtggaacaaaaacagaaaagttgcttaatttcgtgaagtcattgcagtgg tgcatatcatgaatagggaATCTGATTATATGAAGGAGAACCAGTATTTC CCATAATGCAACATATTTAACCTGTACTACATATTTCCCATAATACTACA TATTTTACCTGTAAAAATGTGTGTGATTTGTGTCATTTTTCAGGAGGATT TGCGGATGAAAATGAGAGAATGGACAGAATATTACAACAGCCCTGTACGT GGGAAAGTCCTCAATGTTATTAGTTTGGAGTTCTCAAAAACAAAGTAAGT GATATTTGATTTTTGTTACTTCTttacagatgagatggagtttttataag atactctAGTAATTAGTCATTTGACGTAATAAACATGACGCATTCGttag aaaaattgttttttactggttaacgaccaaccaaatcaaataagagatca agtaaaaactccatctcgtggAGTTTAAGGACTATTTTTCTGTTAACGTT AATGATTATTGTTGTTAGGGGGCactcaaatttgattttctgtgaCTGAT CATGAAAAAGCATTTTTTAGGAATATGGTAAACCTTATTGGTAAGCTGAC CCTTACAATTTGTTGGTTTCTGGTCCACCCAGTACCAATTGACTTGTTTA AAAACTCTGATTAAGTCATTGTAAACAAGCCACCTCACTGCAAGCAAGAC GATGCTAAACCACTACAGGGTCAAtcatttaatgttttttaaatgtaaaa gAATGAAATAAGTAAAATCAGGACCAATGGAATAAATCACAACAGCCAAT TTCACCTTGTTAATTTTTGAATATAATCCTTTTATTTTAATAGTATGGCT GAACTAGTTGAAGCTCCTGAAATTGTCCGTAACATCTCGTGGGTTGATAA CGCATGGCCCAAAGAGAAGAACAGCGAAGAGTATGACGCATTTTTAATCa tataataattttaaatccTGTGTGCTATGGTGTGTTACCTTATTTCAGAT TTCACTAAATTCACTTTtcttttctggaatttttttattttgttgagaAA ATAGATTCGATTTTACAGTTACTGTTTTTATTGACAAATTGACTTCACTT AGCGTTTTCATAAGTATTGTCATGGCCCTTTTTCTCCTTTAAAAGCTTGA TCGCTTAACCATAGCGTCAGCTACCCTGCTAGATCGGAGGGTCATACcct ccaaaaaaacaaaaaagggtgGGGGCTAAAGATGTTTTAAATATTTGGGG GAGCTGAAATCTCATAAAAGCTCGTGAAgctgaaaatctttaaattaaCA AAATGTTTTATCTTAAACCTTCCAACTGCAACACAATCTACATTTTAAAT AACTCTTTTATTGTGGAACAAATGGTCGAGCCTCGAAAGCCTTGGGGGCT ACCAAAAATATCATGAACCTTTGGTGGGGGCCTAAACCTAGGCTGATGCT ATGAAAATCATAATTGTAAaagtactttttaatttttttgtctttagtTA CTGTTTTTattgacaaattgatttcactTAGCGTTTTCATAAGTATTGTC ATGACCCTTTTTCATCTTTTCCTCCTTTAAAAGTTTGATCACAAAACCAT CATTGTAAAACCACTTTTTAAATACTCCCTGATCCTTACTTTTATACTGA GATATTTTGTTTTTACAGTCCGCATACCAAACCGATCGTAGCAAAATACT GCTTGATGAGTGTCAAAGATTGTTACACAGATTTTCATGTTGATTTTGGT GGGACGTCTGTATGGTACCATATTGTTCGGGTATGTGCTGTTAAAACATC AAAGTCATCAAaggggccattccattttatatccaaacATGGAtatggac gaacatttccagggggtaatctgAAAAGAATTTCCTGGTGATCTAAaaga gtggtttcatttttgtAGGGGGTAAAaacttgtttcaaaatttccaggag gtttcagactgattttagttcgtccactcTCACTTTAAAGTTAGGAAAAG AATCTTTCCAAGGGTATttaattaaaagttttattatttccgggggaggg gggtatccacaaatttaaaagaatattttttagaagtaaaaaggttcgtc cacccccctgtatggatttttAATGGAGCAGCCCAATATCTCCTCCTGCT TCCAAGCCGATCAAAATATTTATGCGAGTTTTTCACGTCTGAAAAAAAGT TGTATGTGTTTTGAACAAAGCATATCATAATGTGGTTTGTTTAAAAACCT GACCAGAACTGCCAGCTTCTATTGCAATTTCTTAACTTACAGTGTTTTAT ATTTCGGATGGTTTCTAAAAGATTGACCAGACAATATCTATCTAGAATGT CATTCAATCATAATTTCTTTCTGTATTAGTGGGAATTTATCAGACTGCTT AAATTCTTGATATGTGTAACTCAATATTACATCATTTTTCATATCGCAAA CACCCCCaaaaaactggaatttgacTCCTGTGTTGCTATTTTTAGTTGtt agttttagttttttcgggtgtttccgatatgaaaaatgacgtaatcgtAA GTTACGCATATTATATCAAgaattaatgttttttttgttctttagGGTGA GAAGATTTTCTACTTCATCGAACCAACGGAGGAGAACCTAAAGAAGTATG CGCAATGGGTGTCATCCTCAGATCAAGGCCAAGTGTTCTTCGGAGAGAAA GTCGACAAATGTTATAAAGTGCGTTTAACGCAAGGAAACACACTTATATT ACCCACAGGTAAGCTATAATGTTTATTTATGTCAAAGGTTTTTTCACGTG CACGTAAAATCTTCATCAAGACCTCGTTCGTAAGGCTATCTttagggaat ttccccgacattacGTAGCGTTTTTattgattaagagggtcttacgtgac ttttccttccgttcaaaactttttgaacgtaagcaaacttCACTTAAGGC CTTAAAACAATACGTAAGTATAGGGAAATTGCCCATTCCTGAAGGTCTTA AAGTATGATTTTACGTACATTTGGAcaaagttaaaggttttatttttaca taagtgttcccgtttcatatcatatatttcatataaggacatctccctat tgttatattgtgctgaataaacatcaacattgtttttcttgtcctctttc tgatcaatcttgctccacatccgtgtcaattcaatgtgaaaaaacttgta atttgaaattgatgagtaagcaaacgatatcacttttatttaaaaacaaa acctttttaagcttcttttttttgtaaaagttgttGTAAAATAATGCAAT GTGTCTGGGCTCGGGGCTAATCAATGTTAGTTATTAGTTTCAAttctacc gtaacttggtcttatgtcgacatccctcctctaattccaacacccttttt atcagctgaaattgatagaaaggttgaaactgtttttcttggcttagtgg tcacagaggaataatccttttttcaatcagtgattctagctttcatatta ttcctgtctctaaagaagggtgtcggaattagacaagggatgtcgatatt agaccaacttacggtacaagATCAACTGAATTTAGATTCTAGCTAAAGAG GTTTGACAGTATAGTTCTCTCTCATGTACAATGAAACAAAATCCCAAATC ATAATCACAGTATGAATACACCtctgaaaataagaatttaGCTGTGGGGC TCATCTTGAATGTCGAACTACAATCGGCGCCAAattatttggcacaaaag gggaattcccccAAAACTGCCAAGTGATtattaagtgctttaaagtatag ttagaaagtagagtttcaactctgagttttaatatgagacttaagactta gaatttcaggatctaaaagctcaaaaatgttccaatatggCTGAGAACAT AGCCTGGAAGTCACTTAACCCTtcccaaatcgaaatattcaaataaagaa agtggaagtactgaaattgcaattctcgcccgagctttaaattctgaaaa acgttaaaatacccaaatttgcTAATATATTTCGACACTGATTGTAGTTT TCCATGAAAATGTTgtagtttttctaaattttggaaatcttcATTTAAAG AACTAGCTCCATTATCGTTTTCAACACGTAATTATTTATGATTCTAGGAT GGATCCATGCTGTGTTGACACCAAAAGATTCTCTAGTCTTTGGTGGAAAC TTTCTTCATTCATACAACATTGCGCTGCAACTAAGGTTTGGAATAttaat tttaacttattttgacGAAATGCTGTAATAAAGTTATTATTATTTTGCAA GAACATAGTCCTTTTGCTTCTCGATCCAGCAAaaaagcgagtttatgtat tcgagataaatcaagggggacggtataaatcaaagttgacatgtctccaa aatcaccgatCGCTTTTTATGACAATTCGCTTGTGAAGTTTTGTCTTGGA TTTTTTCTAACagctaagtaagtaagtaagtaagtaagtttgcgaccgca gtcgagggcgacccgaaggctcccttttcatatagctgtctacccgaagg taggggagggtgccactcctttccctggatttctccacttacccttgatc catCTCTTTAACTGCCGAGCaacaagcagagaggcatcaagtactatTTT GGGAATCTATGGTATgacggggatcgaacccacaaccttgcgcaccgtag ctggatgctctaccttcatgctacagTTGCTTTTTTTAACAGCTAATGGT AATAACGTTCATGGTTTCCCTTTAGAATCTACGAATTGGAGAAGAGTTTG CACACacctttgaaatttcttttcccaAACTTTGAAACAACAAATTGGTT TGCCGCAAGATCTATACTTAGGAAAATCAGAGGTAGGTTTTGGCTCTCAT TAAGTTTCATACACGACTTTCTCATACACTGttacttcgtagggcacccc ttagatcagggcaaaattttgatattatgcCCCTAATATGATGTAGAATT GACAAAGAAAATTTGCcattcgaatctcctgcagttttcgagtgaatcga tttttagttaatcgatagaacttatcaagggtccccctttactaacggtt ttttcgaagtctgaaaatcaaatatctgaggccatcaacggattcagcgt gaaaagtagataaagaaaatgggttatttgttaagtttcgaccacctggt gcccggggggggggcactccaggtaagtgacctaccggacgtgcggccct taagggtagtttttttggactttggaaagtgcactgtaagggttgatttg tgagcaagtgggaaaaagtgcattgtaagggtgtaaaatttgagaaaata ccaaattttgaggtaaactttgagaaatttcaaaatattttgaaaatggc aacgaaaagggcaaaaaatttcgaaaaattgcactataagggtcgatttt cagccaaatttttcctgcactgtaaggctccaattttagagacctgattt ttggccgaacgtacggtcgttttcaaaaacgagccccccccccccgggac ctggtgccgagaaatggcatttttaaggcgaaaaatcgacgtttttggcg ttttccgatgacgtcaccATTTTCTGGGagcattttccgaaaaaatcatT CTCACAGCTGAATAGaactgaattagtagtatccgaaaatggtatggttt gttaactttcgatgtctagatctcgagatattttggtttacatattgaaa attatcgatattttttgctgagtcagcagtttttcagcatatttacccac cttaaaaatgaaatatctcaagatcggaacatcgaaagttaacaaaccat accatttaaggatactactaattcagggacCCTTGTTAAGATtcatcgat taactaaaaatcgattcactcgaaaactgcaggagattcgaagggcaaat tatttttgtcaattctacaccctattaggagcataatatcaaaatttgcc ctgatctaaggggtgccctacgagaACCATTTTAAGGTCTTttctgaatc tcggacgctggtctatctccataactcgaaactcgaacaagttttcaaTG CTTCATGCAATCGTCTACATAGCTCgaaatttctataattcgaaaacATT TGTGCTTGTTTTCCGTGtgcgttcgagttatggaagcTTCACTGTTTCGT TTGTTTGTATTGCTTCAGAAAACAGACCTGATGCTTTATAAAGCTCCCTC TCGTGTTCTAtagaatgggccattccatttaaTGACCATACagagggggg tggacgaacatttccagggggtagtaatccgagaagaatttccagcgGTC TAAAgtggttttcattttttcaggggGTTAAAAGTTATTGTtgattttcc agggggttaatAACTGGTTTTAGTTCGTCCATCCTCACTTtaagatataa aaattttccaagggtatttttgcaaatttttccattttccagggggtatc ttGAAAAAGTTTGTCCAACCCCCTGAATGGAAACTTTATGGAACAGCGCA ATTTGTAAAAACATTTGCATCTTTTATATCTTTCAGAAATTCACCAGGGA GGATACAGGCTACCCATATTCCTTTACAAAGGAGTGGAAACCATGTTACT GGCTTTTCGAAAGTGGACCAAGAAACAAGATGAATTCGCCAAGTTTCACA AGCTTCAAATACCGTTGGAGATGAACGCGCAGAAATTGATGAAATCActc gaaaaagaattgaaaatggACATTGTAAGtacatacacattttttaataa acagttttttttccaaccttttttgcccgaagaaaagattacgtcataaa aaagtttcgcacgaacaaaaaaaaagttgaaggaaaNGAAGAAAAGATCA CGTCATAAAAGTTTcaaacgaacaaaaaaaagttgaaggaggttcaattt tcttcaaccgttacgtcaatttcgaccaatggaattgcttcatttttcaa ccgaccaatgaccttacaaaaacgtcaaaaagttttcgctcgtgtcgcac gaaagtggagaccggccttaagcaactccaattttcgggtcagggctagg gtttgcttagcattctagatCATTTTCTAACAAGTTTGCTTTGAACACAC CTGATATtgtaccatatttatgcttatttagtGAAGGGCTCTTGTTTGTC ATGCTTAGATCTAAGATAAGATATCTGTGGCTGCAACACTGATTAgtttc aaatttgataaaaaatttattgttttgttCTCCCAGAAAATGCTGAAAGA CTTCAACACAGAGGAACTCCTATCACCAGCAGTCTATGGTTCTGAGTTGG TTGTCAACAAACCTAATATTATTCGATTGAAATTCAACCGGACCACTCGT AATAGGGCTTCGGCCGCTGAGAGCCAGAGCAATAGTAGTGAGGTTTCAAG TCCAGAGAAATTAGATCATGCAAAAGGTAGGGttggtttttctgaagaat AATAGAGACGATGTACtcctaagaaaaagaaaatttctggaattctTTGT AAATCCCTCAGTCATAACAAGAGAATTTCTGGACAAGTGAATCGGTCCAT CAACGGATAGGAAAGCTTAGATATCCTCGTCTTTCTACgcttaaaatatt ttgttccctttttcggaaaaataaggTTATGGAGTGAGTTTTAAAGcttt gttaactgaagggaccattaaaattgttcgagttaaggagacatttgatt AATAGAGGTTCGATCTATCTGTgctaaaagaatattttttcttcCCTTTT TCAGGTTTAGAACGTTTAAAGAAGAAACGAGACAAACTGAAGAAGATGAA AGAAGAGTTAGAAAACAAGCGCACGTTACCCTCCATCAAATTGAACTTGA AAGAGGGTGGAAGTGTTTCCGTCAAGAAATACGAAGAAGATGATGACGAG TTAGATGTCACTGAACCTCGACAAAGGTGATTTATAGACCATAAAAACTC TATAtactttcgaaccaatcacatgTGGTTGCCTCCCACAAAAAATGCAA CGGATCCTAAAGGTTGACCCCTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041408XLOC_041408Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066153-exon-scaffold_451-1491911889:490692..490890TCONS_00066153-exon-scaffold_451-1491911889:490692..490890Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:490692..490890TCONS_00066153-exon-scaffold_451-1510915933:490692..490890Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:490692..490890TCONS_00066153-exon-scaffold_451-1575043694:490692..490890Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:495010..495095TCONS_00066153-exon-scaffold_451-1491911889:495010..495095Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:495010..495095TCONS_00066153-exon-scaffold_451-1510915933:495010..495095Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:495010..495095TCONS_00066153-exon-scaffold_451-1575043694:495010..495095Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:496167..496208TCONS_00066153-exon-scaffold_451-1491911889:496167..496208Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:496167..496208TCONS_00066153-exon-scaffold_451-1510915933:496167..496208Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:496167..496208TCONS_00066153-exon-scaffold_451-1575043694:496167..496208Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:497626..497684TCONS_00066153-exon-scaffold_451-1491911889:497626..497684Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:497626..497684TCONS_00066153-exon-scaffold_451-1510915933:497626..497684Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:497626..497684TCONS_00066153-exon-scaffold_451-1575043694:497626..497684Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:498347..498405TCONS_00066153-exon-scaffold_451-1491911889:498347..498405Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:498347..498405TCONS_00066153-exon-scaffold_451-1510915933:498347..498405Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:498347..498405TCONS_00066153-exon-scaffold_451-1575043694:498347..498405Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:498817..498983TCONS_00066153-exon-scaffold_451-1491911889:498817..498983Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:498817..498983TCONS_00066153-exon-scaffold_451-1510915933:498817..498983Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:498817..498983TCONS_00066153-exon-scaffold_451-1575043694:498817..498983Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:499153..499193TCONS_00066153-exon-scaffold_451-1491911889:499153..499193Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:499153..499193TCONS_00066153-exon-scaffold_451-1510915933:499153..499193Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:499153..499193TCONS_00066153-exon-scaffold_451-1575043694:499153..499193Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:499635..499735TCONS_00066153-exon-scaffold_451-1491911889:499635..499735Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:499635..499735TCONS_00066153-exon-scaffold_451-1510915933:499635..499735Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:499635..499735TCONS_00066153-exon-scaffold_451-1575043694:499635..499735Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:500285..500371TCONS_00066153-exon-scaffold_451-1491911889:500285..500371Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:500285..500371TCONS_00066153-exon-scaffold_451-1510915933:500285..500371Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:500285..500371TCONS_00066153-exon-scaffold_451-1575043694:500285..500371Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:501110..501221TCONS_00066153-exon-scaffold_451-1491911889:501110..501221Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:501110..501221TCONS_00066153-exon-scaffold_451-1510915933:501110..501221Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:501110..501221TCONS_00066153-exon-scaffold_451-1575043694:501110..501221Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:502037..502199TCONS_00066153-exon-scaffold_451-1491911889:502037..502199Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:502037..502199TCONS_00066153-exon-scaffold_451-1510915933:502037..502199Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:502037..502199TCONS_00066153-exon-scaffold_451-1575043694:502037..502199Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:503589..503676TCONS_00066153-exon-scaffold_451-1491911889:503589..503676Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:503589..503676TCONS_00066153-exon-scaffold_451-1510915933:503589..503676Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:503589..503676TCONS_00066153-exon-scaffold_451-1575043694:503589..503676Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:504217..504323TCONS_00066153-exon-scaffold_451-1491911889:504217..504323Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:504217..504323TCONS_00066153-exon-scaffold_451-1510915933:504217..504323Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:504217..504323TCONS_00066153-exon-scaffold_451-1575043694:504217..504323Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:506028..506215TCONS_00066153-exon-scaffold_451-1491911889:506028..506215Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:506028..506215TCONS_00066153-exon-scaffold_451-1510915933:506028..506215Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:506028..506215TCONS_00066153-exon-scaffold_451-1575043694:506028..506215Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:506728..506917TCONS_00066153-exon-scaffold_451-1491911889:506728..506917Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:506728..506917TCONS_00066153-exon-scaffold_451-1510915933:506728..506917Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:506728..506917TCONS_00066153-exon-scaffold_451-1575043694:506728..506917Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1491911889:507246..507515TCONS_00066153-exon-scaffold_451-1491911889:507246..507515Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1510915933:507246..507515TCONS_00066153-exon-scaffold_451-1510915933:507246..507515Clytia hemisphaericaexon
TCONS_00066153-exon-scaffold_451-1575043694:507246..507515TCONS_00066153-exon-scaffold_451-1575043694:507246..507515Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:490692..507515 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.748138 1.44213 1.72156 0.538214 40.8744 30.242 22.3353 23.5671 11.1788 14.565 8.71704 9.75069 7.87443 8.53585 7.14412 6.87352 9.77206 12.4678 4.62593 6.46964 6.54734 5.32762 3.98713 4.15006 10.1106 4.84306 4.87895 1.30572 3.34511 4.05515
Blast
BLAST of TCONS_00066153 vs. Swiss-Prot (Human)
Match: KDM7A (Lysine-specific demethylase 7A OS=Homo sapiens GN=KDM7A PE=1 SV=2)

HSP 1 Score: 462.996 bits (1190), Expect = 2.528e-150
Identity = 216/441 (48.98%), Postives = 297/441 (67.35%), Query Frame = 3
Query:  117 VFCVCKKPYEDGQFMIECGKCNGWFHGSCVGIEEYQAADIDIYVCPKCQPKHGPLVYSFLDATCSDGGLEVKKRRNIARHNYKEIHEGTKQITAGTVMFVRQLKARKFKEPTEDVLTTLPDGTELNGKFLHENGFDKPMVIQEKSGLGITVPPPNFTIYDVEKRVGSMHELHVIDVARQEDLRMKMREWTEYYNSPVRGKVLNVISLEFSKTNMAELVEAPEIVRNISWVDNAWPKEKNSEDPHTKPIVAKYCLMSVKDCYTDFHVDFGGTSVWYHIVRGEKIFYFIEPTEENLKKYAQWVSSSDQGQVFFGEKVDKCYKVRLTQGNTLILPTGWIHAVLTPKDSLVFGGNFLHSYNIALQLRIYELEKSLHTPLKFLFPNFETTNWFAARSILRKIREIHQGGYRLPIFLYKGVETMLLAFRKWTKKQDEFAKFHKLQIP 1439
            V+CVC++PY+  +FMIEC  C  WFHGSCVG+EE+ A DID+Y CP C   HG  +              +KKRRN  RH+Y EI +G+K + AGT  F+++L++R F  P+ D +     G++L  ++L ++GFD P+++ +   LG+ +P P F++ DVE+ VG    + VIDVARQ D +M +  + +Y+ +P R KVLNVISLEFS T M+ELVE P+I + +SWV+N WP     +    KP V KYCLM V+D YTDFH+DFGGTSVWYH++ GEKIFY I+PT+ENL +Y  W SS  Q +VFFG+KVDKCYK  + QG+TL +PTGWIHAVLT +D + FGGNFLH+ NI +QLR YE+EK L TP  F FP FE   WF A+++L  ++E+ + G++   +L +GV+ +  A + W KK  E    H  +IP
Sbjct:   38 VYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLHGSSL--------------MKKRRNWHRHDYTEIDDGSKPVQAGTRTFIKELRSRVF--PSADEIIIKMHGSQLTQRYLEKHGFDVPIMVPKLDDLGLRLPSPTFSVMDVERYVGGDKVIDVIDVARQADSKMTLHNYVKYFMNPNRPKVLNVISLEFSDTKMSELVEVPDIAKKLSWVENYWP----DDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNLLETLKELREDGFQPQTYLVQGVKALHTALKLWMKK--ELVSEHAFEIP 456          
The following BLAST results are available for this feature:
BLAST of TCONS_00066153 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KDM7A2.528e-15048.98Lysine-specific demethylase 7A OS=Homo sapiens GN=... [more]
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