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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066152 ID=TCONS_00066152|Name=TCONS_00066152|organism=Clytia hemisphaerica|type=transcript|length=1295bp
ATCTTGAACAGGTTCCATCAACAATAAACCGTTAGTTTTTCCAGTTCTTT
CTTTCTCTTTTCGTTCTCTTTTTCTCACCACCAACACGATATAAACAATC
AACACCAATAACCAAACTAAAGCTAACATTGATGTACTTTTAAATAATGT
TCGTCCACCATATTTCTCATAAATGATTCCACTGATACTTGAACCTATAA
TTGTTCCTAATCCATAATGAGTTGTGTTAAACAAAGAAATCAAAGTGGTT
ATTACTGGTAGAGGGCTTGTAGCTTTTAGATGTGTAAGTCCAGTAGCAAT
AAACAAGGTAGCTGAGACAGCATGTAAAGGTTGGAAAATGAGGACTACCC
ATGGGTTTTGGATGAATCCAATACCAAAGTAGCGTACAAAATACATTAAA
AACACAAAAGCAAAGGATCTGTATGTACCACCGAGTTTGTGAATGATATC
TTGACAAAACGCGAAACCAACTACCGACGCAAGATTAGAAATTACCACTG
ATAAGGTTAAGAGGATGGATGGCGCGTCCATTTCACGGAGGTATGGGTAC
AAGAAGCTGGTGAATTGTGAATATTCAAGTCCACTCACAAACGTGGTCAA
GTAGAAAAAGATAACATCATACTGGAACAATGTTTTGATAAGAGTTTTAC
GTAAAttctttttcgttttgtttGTTGTTCCTTCTTCTCCATTCTCTTTC
TGTTGCAAGGTCTGTTCatcttcttctttattttcctcCTCGTGGTTACT
TTTGAAAGAAACACCTCTGAAAAGCGTAATCGACGATGCACCATAGCAGA
GAGTAAAGAAAACATAAACGCCAAATATGCCAGCGTAGCATGTGATATTT
GCAGTTGGAAAGAAATCAACAGCTAAATTGGTGGAAAAGATCCCAAACGC
AGCTCCAAGGGCTGCAAACATGCGTTGGCGACCGTACGTCAAGGGCCGAT
CTCCAGGTGCTAGTTGACTACGTCGCAAAGTGCCAGTATCGACGAACGCT
AAAGCGCTTCCTTCTGCAAAAGACACACCAATGTTGATGAGAACCATAAC
GAAATAGAATGTCCCAAATCTGTTTGATTCTATGTTTTCATTATCTTCAT
TTGACTTCGGTAAGGCTGTCGCCACAGTCCTGTTATATACATATCCAGTC
TCATTCACAGCACCATAGGACACGTTCATACTACTTAAAGCAGTGTCTTC
AACGTAAGGACATTTGTTGGTTTCAGGGTTTCCAAAATGCAGTCCAACAA
AAGGTTGAGTGGAGATGGTCAATAGAGATGTGATGCACATCAAGA Run BLAST on NCBI transcript from alignment at scaffold_451:473138..474504+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066152 ID=TCONS_00066152|Name=TCONS_00066152|organism=Clytia hemisphaerica|type=transcript|length=1367bp|location=Sequence derived from alignment at scaffold_451:473138..474504+ (Clytia hemisphaerica)
ATCTTGAACAGGTTCCATCAACAATAAACCGTTAGTTTTTCCAGTTCTTT
CTTTCTCTTTTCGTTCTCTTTTTCTCACCACCAACACGATATAAACAATC
AACACCAATAACCAAACTAAAGCTAACATTGATGTACTTTTAAATAATGT
TCGTCCACCATATTTCTCATAAATGATTCCACTGATACTTGAACCTATAA
TTGTTCCTAATCCATAATGAGTTGTGTTAAACAAAGAAATCAAAGTGGTT
ATTACTGGTAGAGGGCTTGTAGCTTTTAGATGTGTAAGTCCAGTAGCAAT
AAACAAGGTAGCTGAGACAGCATGTAAAGGTTGGAAAATGAGGACTACCC
ATGGGTTTTGGATGAATCCAATACCAAAGTAGCGTACAAAATACATTAAA
AACACAAAAGCAAAGGATCTGTATGTACCACCGAGTTTGTGAATGATATC
TTGACAAAACGCGAAACCAACTACCGACGCAAGATTAGAAATTACCACTG
ATAAGGTTAAGAGGATGGATGGCGCGTCCATTTCACGGAGGTATGGGTAC
AAGAAGCTGGTGAATTGTGAATATTCAAGTCCACTCACAAACGTGGTCAA
GTAGAAAAAGATAACATCATACTGGAACAATGTTTTGATAAGAGTTTTAC
GTAAAttctttttcgttttgtttGTTGTTCCTTCTTCTCCATTCTCTTTC
TGTTGCAAGGTCTGTTCatcttcttctttattttcctcCTCGTGGTTACT
TTTGAAAGAAACACCTCTGAAAAGCGTAATCGACGATGCACCATAGCAGA
GAGTAAAGAAAACATAAACGCCAAATATGCCAGCGTAGCATGTGATATTT
GCAGTTGGAAAGAAATCAACAGCTAAATTGGTGGAAAAGATCCCAAACGC
AGCTCCAAGGGCTGCAAACATGCGTTGGCGACCGTACGTCAAGGGCCGAT
CTCCAGGTGCCNTTCCAAATGCAGCTCCAAGGGCTGCAAACATGCGTTGG
CGACCATACGTCAAGGGCCGATCTTTAGGTGCTAGTTGACTACGTCGCAA
AGTGCCAGTATCGACGAACGCTAAAGCGCTTCCTTCTGCAAAAGACACAC
CAATGTTGATGAGAACCATAACGAAATAGAATGTCCCAAATCTGTTTGAT
TCTATGTTTTCATTATCTTCATTTGACTTCGGTAAGGCTGTCGCCACAGT
CCTGTTATATACATATCCAGTCTCATTCACAGCACCATAGGACACGTTCA
TACTACTTAAAGCAGTGTCTTCAACGTAAGGACATTTGTTGGTTTCAGGG
TTTCCAAAATGCAGTCCAACAAAAGGTTGAGTGGAGATGGTCAATAGAGA
TGTGATGCACATCAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066152-exon-scaffold_451-1491911889:473138..474093 | TCONS_00066152-exon-scaffold_451-1491911889:473138..474093 | Clytia hemisphaerica | exon |
| TCONS_00066152-exon-scaffold_451-1510915933:473138..474093 | TCONS_00066152-exon-scaffold_451-1510915933:473138..474093 | Clytia hemisphaerica | exon |
| TCONS_00066152-exon-scaffold_451-1575043694:473138..474093 | TCONS_00066152-exon-scaffold_451-1575043694:473138..474093 | Clytia hemisphaerica | exon |
| TCONS_00066152-exon-scaffold_451-1491911889:474166..474504 | TCONS_00066152-exon-scaffold_451-1491911889:474166..474504 | Clytia hemisphaerica | exon |
| TCONS_00066152-exon-scaffold_451-1510915933:474166..474504 | TCONS_00066152-exon-scaffold_451-1510915933:474166..474504 | Clytia hemisphaerica | exon |
| TCONS_00066152-exon-scaffold_451-1575043694:474166..474504 | TCONS_00066152-exon-scaffold_451-1575043694:474166..474504 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_451 | supercontig | scaffold_451:473138..474504 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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