TCONS_00066057 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066057
Unique NameTCONS_00066057
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1000

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066057 ID=TCONS_00066057|Name=TCONS_00066057|organism=Clytia hemisphaerica|type=transcript|length=1000bp
AGGCAAGCCAAACTGCCACAGCAGGCAGACAATAAGTTTATTGCATGGAG
ATTTTAAGAAGtgaatcaaagagaaaaataaaaaaggatataaaatataa
agaaaGGGGAAGATGAGGCCACTGAACAACAACAGCCTGGTCAAGAAATG
TGAAGTGGAAACTCAAAGACTTTTCCAATTGTTTCTGACCGTTGGAGAAG
ATTCGCACAAGTTTCAATCCTCAGAAACTGATGAAGTTCAATATTTCGTT
CGTGAGAGGCCGTCGTCAGTTCGTTCATCCGGCTCCTTTGGCAGTGCTTC
AAACATCAGTTCACGAGGTCTTGATGATGCCTCGAAGTTTCAAAATGCGT
TCGACCATCGGAAGCAAAGTGATGGGATTTCCATACCCAACAGGAGTGGT
AGCTCACCCATGATAAACAGTATCGCTTATTCGCCAAACTTAGTATCCGA
TTCAGCGCGAACACCGCCCAATTCTTTTAACGCTTCTTTCACTTCATGTA
CACCGCCCTCTTCATCACCTTCCTTGAAACATGCCATCGAAAGAAAACGA
CCAAGCTCGTCTGACTTCTCACGGTACAAGCGAACTGTCGCGGAAGGTCC
ATCCGCCGCTGCCGCCACCTTTATACCTTTTCCAAGTGAACAGCAACGGC
CGCGCTCGAATACAGGTCCAAGTGAAGAAGTGTTGGCACAAACGGCACGA
ACCATTGCTGATATCGGTGATGATATTGAACAAGAATACGGAAACAAAAT
GACGAAATTAACAACGGATTTGGTTGGCTTTCTTTCGGAGAATACGTCGA
TGTCTTACGAAGTGTTTGCAGCGCACGTCAACGAGTTGGTTGGAGAGGAC
CGCAATTGGACCAACCTCGTGTTCGTCATGCATCTTGGGAAGCGAGTGGT
TCGCACAACTTCTTACGCAGGCGAATATTTCGGAAGATTCCTCGGAAGTG
CTTTTGGTGAAGAAATCGCTCGTTCGGGAAGCACCGTAAGTAGTTGTTAT
Run BLAST on NCBI

transcript from alignment at scaffold_45:37209..53259+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066057 ID=TCONS_00066057|Name=TCONS_00066057|organism=Clytia hemisphaerica|type=transcript|length=16051bp|location=Sequence derived from alignment at scaffold_45:37209..53259+ (Clytia hemisphaerica)
AGGCAAGCCAAACTGCCACAGCAGGCAGACAATAAGTTTATTGCATGGAG
ATTTTAAGAAGGTAAGGGTCTGTTTTTTTCTGACAGTCTTAATAAAAATT
TATGGTATTAGAGTTCAGGTTAATTGAGATGTTTCAAAGCCAAGTTGATC
AGGCACCTACATAccataacttggtctaatgttgacatccagtcaggcac
atcctggcaaatgaacggggtgagcatttgcatggggtattcgtcaccca
gtgtaaatgagataggacgtctcaggctaaaagcgNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNgtcactttcgttttcaaccctGTTCATTTGctaatggt
cgcaagtgaaaaataccccgttcatttgccaggatgtgcctgactgacat
ccctcctctaattccaattccgacaccctttttatcagctgaaattgata
gaaaggttgaaactgtttttctttgcttagtggtcagagaggaataatcc
cttttcaatcagtgattcaagctttcatatcaTTCCTgactctaaagaag
ggtgtcggaagtAGACGAGGGatgatgtcgatattagaccaacttagcTT
ATTTAtgcgaccatcgaaaaattgttctgtttgcgtcgcaacaggtgtta
aaaatgcatgcaggTGGACATGCAGTCGGAAAAATTCCCCGggttttttt
aaatcgcttCTGTAACTCGGGGGCAGGTGGTCTCTGGTGGTGACTGACTA
GTCGTGTGTCTGGAGCAGGTGGTGactagtctggagatccatactctcta
tttaAACTTACGCCACATAAGCAAAAACcccatcagaagctactcattga
gagtatggtatttttgacccagtttgaatttgtttacatttggtttgaat
ttcgtgccaaaaaagccgtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTGATGTATACCAAAAGTTgtagccatttttcatca
aagttttcccgttCCATCGCAAAGTCCGTACTTGGTTGTACCGGTGcgtg
tatgtgttcttttaactaatgacttttattttaaaaagaaagtaaaagcT
TCACTTGGCGCTAGGTCCGTGCTGTCCTTTAGGCGTTACACCTTCTTTGC
CAACTTGTGCGATGTGGTTCGCTCGACcgcgcaaacaatgaaaatatgat
gtaatgatatcatagcgCGAACCAATGGTATTATGCgagcagcaaatttt
catgtatttcATACACGATCATATgttttcaaaagcttataaagtatagt
gtggttggtggttacaagtatccgcgattttcacaaaaatgtataccttt
gatttcttataacgtcaaacctaacttttgaaaccccccaccccctcgta
acgtcaatttgacgttttgcgttgtcaaatgaatatggacggctcccctt
agccaatcagatttgcgcacttccaatcaaaacaataatatcacgtgatt
tcaacaattgttcaACAGCCAATAAaattctgcgaccagatttggcatct
acaaaaatacccggccACTCTGTTGTTTCtatattattattcgttttaac
taaatgtTATACTNaaccagatttggcatctacaaaaattcCCGGCCACT
CTGTTGTTTCtatattattattcgttttaactaaatgtTATACTTCGAAA
CCACACAAACAGAGAAGACGGGTCTCCAAGCTAGGTGGTGACACAAACAG
AATAATTTTTGGATGGCTGCCCCAGAGCGATCAAGAAAAAAGCTATATGT
CAAAAGAACAATTTGCTTTTTCCGGATTTTTCCGGAAAATCAGGggaaaa
tatgatgcgggcAGGTGcaacgcgaatagaacaattttttgatggtcGTC
TTACAGTATTCAGTAGTTGAACGAAAGAAACACCATCGACAGAAAAAGTT
ccacaaatttaccgactcaccaaCTCaatcaattctactcaattttcaag
AGTTTGTCAGGCGAcgcgaaacaaagatatttatgatagaccttttcgcc
ttttcatccgccatattgaattgtatgcaaaaattatggtggccgaattt
ctgtggtgaaattcccttagaaagtatgcaaaacatatgcaaaaagaaag
tattaatataaaacttacatgcataattggcattatattaaaatgTAATC
TTNTCTGTgatgaaattcccttagaaagtatgcaaaacatatgcaaaaag
aaagtattaatataaaacttacatgcataattggcattatattaaaatat
aatcttgtagaagaaagattaaatttgcttcttttgaaaactcaGAGAAA
TAATAAAATTCGCTCAtgtcttagaacaagcacttcaaaccataacatta
gacataaacttaagctgaaaaatcacccaagaaggtacaaaaataatcct
tattcggccgacggtaaattattcttcTGAGAATAGAACCACCAAACGAa
cgaatcaaaacattgatctgaacccgctgacgtcataattactgctttca
gtttgcgtgtttgaaagttgatgtgtgtactccgtctttgtGGAATTTTT
AATGGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNctttataagatgctttgttggc
tttttaatctttgtgtaaacttgcatatgttttgcatattttccaactaa
atccaaccacagctttttcgttcctgtatttttacatacaattcaagatg
cgaatggaaaggcgaaaaggtctattgccgccttattttataaacattaa
aagatcagatagttgctatgacaAAATACACAAAGTTATGGTACTCAGTT
TTTGTGGAATCCAATTTTTTTAGGGGCGCCGAAAAAGTCATCTGCTAAAA
GCTAGGAGTTATGAATCTAAAAAGTATTGTAATTAATATTGCACATGGTA
TAGAGCTTTGTGACGGGATTTGTATATGTAACATGTCGGCCTATTGAAGT
AACTCATTATGTTATGGTATACATGATAGATTAGAAGACAAAAGATCGAA
AAGATATAAGAGGATGAAAGATCAAAATGATCAAATTGTAAACTGGCAGC
TTTTAACACCAAATTTAGAGACTttaataaagtaaaaataatccAAATAA
AAGGAAATTATATTTCTGCAATATCCTTACTTTTACCGAACAGAACATAC
ATTGTTCtgcatttttcagaatatttatTTTGGTTTATATTTTTTCGAGT
AAGAGAAGAAGGAAGACAACCatgataaaaaaattgtaaaaatttcagTA
TAAATGCAATCTTAAATCTGATTTTTGTAAATGATCAATCGAAGGCGTAG
TATTATTTTATCATGAACTCAAGCAtcaatttgtaaaatttagGGTAAAA
AGGGGTGCCCCAATGAGTAGTCCAATTGGGGTACCCTTCCTTTTAGTAAC
ACCCTACCTTTTAGGAACACCCATTTAAACTAAATTTGACCCATTTTTAC
AActctaaaagtaaaaaaaagaaaaacaaggcTCCCATTCACTTTATCAA
AGTGGCATTGGTAAAAACTATTTCATAAATGCCTATGCTGGGGGTTAGAA
ATTagacttctgaaaacccaatgataaggtaaatataggctaaaatcagg
ctatttagagcaaaagaaggggccttctctttgacagttTTTCAATATTA
TTAAAAATTGATAAGTGGGAGcagggtcctaataaggtccgggggttgga
aaattttcgagaagTGGAAGGggatcgtttatttggaacctaagagtaat
ttcAATATAAATAAGTGTAATAGacaatttcaaaatgcatttgATTGACC
CCACAACAAGTTACAAAGTTTTTATTGATCCCCTGTTTTTTATACCCCTG
CGATGTGAACAGGGTCATACAATGCTTATATTAGTTgacacaaaaaaata
tatttcctgTGCAGTCAATGTTTATATGAAAGTCAGcaataaaaacgaaa
gtgatcccCTCTACTCTGTGCTTCTGTTAGTCACTCCATCTGAAAgcctt
ttttaatttcaaccaatgagattgccgCATATGATGGAGGTAACAATAGG
CCCTAGTTTTTTTGCGCTAATGGCTTTTCAATGCCTTGGATGACTGGAAG
TCTTAAAAATGTCACCCTATTAATGCCATTTTCGTTTGTTTCAATTGGTA
ATTCTAAGGGTTGAATTCTTTCTTATCTTTAGTTTTCAAACAAAAGTGGG
AAGTTAGAACTGGTTAAAATGCAGAGATGATAGTATCAAAAATCTtctct
gattggatgaaagtgCTTAACCTTCATTTGATAGGATGTTACTTTTCAAA
CAATCCTACAGCAATTTTCTGATcggacaaaataaaacaaattaaatatt
tcccagGGGGTGGTTTTTCTAGTTTTTCTACTATTTCTTCATGTTTGCCA
ATCCATGGAGTCTTCATTTATATATCATAGAAAGCTCATGAAACCTGCTA
ATCTAGTTTAGAGTTTTGAAAATCCTTAAAGGGGATGTCAGCCCAAATTT
TTACCATacatttttgttacattttaaaaattttagaatgaGATGATCAA
AATAAGCTAtatattattgaaagtttttttcttaatgCTTTTTATAATAg
acatttgaaaatttccctTCTTTTTAAATCTGTGACGTAACAAACGTGCT
TCTTAAAAGATgagaatttttaaacaaaatttNCGTCAGCCCAAATTTTT
ACCATGCATTTTTGTTACATTTAAACATTTTAGAATGAGACGATCAAAAT
AAGCTAtatattattgaaagtttttttcttaatgCTTTATAATAgacatt
tgaaaatttccctTCTTTTTAAACGTGCTTCTTAAAAGATgagaattttt
aaacaaaatttgttaAACAAGATTTTCGGTAAAAAGAGAGAGATTTCACA
ATTATTAAAAACTTTTGAATCGAAAAAGACAAGATTCCTAACGAATCAAG
TGATACTTTATTAACCAACTAGGATGCATGTGGACATGTTAGACATATAA
TCTGAGCGGGATTGATGAAAGAATCTATGGCTTTTGAAACAATCAGTTTG
AAAATGGTAGCTGTATTATAAGTTCATATAACACAATGTGGTTTAGCTCT
AGAATCTTTAATATCATTACAGCAAATTCCCCTTatcatttaattttaaa
atgcaCTTTGATCGCTATATTTCTTTATCTTTTGATCAGGAATTCTGAAG
ATCAGAATCCTCTATTTTCTACATTTAGTCGCATGAATAGAAAAAGGACC
TAACTCCATCACTTGTAAGCAAATAAAAACAGATAATTTTGAAGAAAGTA
ATATTCATGATTCTGTTCTaagattgaaaatatttccagcTTATTTATTG
TTTATGTTTATTGGTTTTATCTACTCTTGGCTAGAAAAATATGATGTGTT
CTGTAATTAGAGTTGCTCTGATTATAAGATTAGTGCCCtgttttaaaagt
caaaaaattgtgaattttaTGCCGATGGCTGCTTCTGTCTCTCCCTCAAT
TTCGTAATTTGTtaataaaagaaagaggagGGGGAAACAGAAAGACAAAA
TATACTTCACAAACTTACTCTCCTTCGTTCATTTTCTCCCCCGTAGAGTC
AAAAcaataaagattaaaaattgaataactcagccaaaacaaaagatttt
ttaatcGCTCTTTTTGcgattcatttttttcatcgtGGGTATCTTCtctc
aaaaaatgacaaaaatgataTCCCAAAGCTGACGCCCCCTTTAAGATAGG
CGAGCAATCATTTTCTGACTTACAGTTTCTTTTTTGATCTCTTATTGGTT
TCTTTTGTGATTCACTTGTGTCATCATTCTAATGAGTCATTTCTTAGAAT
AAAAACACATGAAATTTACTAAGCTGAATGACTCCAAATGCAATATGTAA
TCTTGGCAAAATAACCTGATAGCGGATCTTTTTTCTTATTAGCGCTTAAT
TCTCATCTATATATTGACTTTTCCATACAGGCTATTTCAATATTTGCAGA
CTTGGCAACCTAATGATTACATGCGAACTTTAAGGCTTGCTGTGTGCTGC
TGCGTGAACACTCTTTTTGAGAAACACaataatataaaaattgaagaaga
ggaGGAAATCAATCTACTATCGGATTATAGCAAAAGGTCTGTCAATTTGA
TGTCCAGCACAGGTTTTTTACCCCTACCATTTTAATATATATcacaataa
aaattattttgtatctatagaccttttgctagatGCAATACCATTTTGAC
TCCATAATGAATTAGTGgtgaaaacattacgtaatggcTCAAAAACATTA
CATATATTTGTGTCTGATAGCagatcaatttctttttttaagcgCTTACC
ttaattccattaatttttgcGCCTTTTACTTTTGTACCTCTAATTTTTGT
ACCTTTAATTCCTGTGCAGCttataaaatagaatttttgtgCATCCTTTA
GTTTTCGGGCATCTTGCAATTACTGGGTTATTTTTCTGAGtgtttttgaa
tatttaaagTGAGTTTTACTCAAGCTCAGTGTGTAATCAAGCTAGATTTT
AGGGCATATTTACCATGAATCatttaattttattaaaagagcCCTAAGAT
GAGATTTCTACACGTTCAGAACAATTACTTATCAGTTATTCAATAGCAGG
GTGTTTAATAAAGGTAATATTCTTGCTCTTTTTGGCAAATATTGTTGAAC
ACAGCAATATTTTCAACACTGTAAAAGTGAAATATTGAATCAGTCGAATT
CATGAGTTATTAGGGAAAAGATGCCAGAGGTGCCCAGGAAACATTGAATA
TTAATTGCATTGCAGaaaagatttttcagatttttattaAGGATTTGCTG
TTAGATTGCTTTGATTACATTCGATTATGTTCACTCAATTCAATTGCATT
CGCTCGCATTAATAGCTCTCTCAGCTCCTGCGGTGCTTGCGTGCTTGCTC
TTATCTGATTTTCCAATGACATATTGGGGGTTGCCCACGCTAATGCTCTA
AAGTTCTAAAGGAGTGGGCTAATCTAATTGCAATCAATCTTATCGAACAT
TAGcctaatcgaacataatcgaatctcaattgaacATAATTCGAAcacaa
ttgaacacaatcggaTATTACCTAGGAATTAGCCTTTCAATTGCGTTCAC
CAATCAAATAGCAATTATTAGATTGCGTGCAATTacatttgattggttca
attgaGATTTTCGCTCGAACTTGTTCAATTGACATTGTCTGGCTTTTTAA
AATGCGTCCTTTCATCTTAGCGTCCCATAGGTATATATTGAATTCTATAA
TATGTTGTTGGACCTTCCttgaggtcctataaattaacctgtgttcgtct
agtctgaatcgcagacctctacaaaaccccaggtagtataggatgcttat
gcttaatgatctacaaaccgctttccggttcagtttttttttaattcgat
gtattttacagaatcttgGTGAGgtaataatttgattgacattgatgtgc
gcggaaaaacgatcgtttcgaacgttttcaatagaATGTTTACAGTAAAA
GTTTACGAAAATGCGTCCTTTCATTCGTTCTTTacaaattcaagcatcaa
aatgtagttttatgaagcaaatttttgttggtgcacacagaagatatatA
CATCatggcacttaaattcaataaatctattttctaatcttttaaaaaat
ctccacattaaacaagaaaggaggaaaaaaaaggagcaaacttccttccg
cctacttttttttcgaaatcctattatatattttccaatctatgatttgg
tgcctcacagaaaatttaaacattacctAATGTtttatttgtagacactc
gccagctttGACCCGTTTTTGGATAGACCATTTTAACGCCGGACCAATAT
TCCTTTATTTTAAGGCCCGGCGTTAAAATGGTCTATCCAAAAACTGGACA
TAGCTGCTCACATGGgaattataattttattttttctaattacTCATTAA
TTTTTACGACTTGTCGATTCTAGCaatgtttgaattttgaattttttcaa
ttagATCAAACTTGTATCATATGTAGCTGATAATTgtaagcatgaaactt
taaaagttctacattaaaaaaaaagttttgactcATCATTATtgtgtgaa
atcaagtgcgtattacttatgggtaatgaatcaacggatcctgcacatCA
TTATTGTATTGCTCCTTTACGTAGAGCACTGTCTTTGGTGAAACAAACCC
ACCTTTATCGCTACTATATTCTAATTAGCCTACTCTATAAttataaattt
gttttaaaatgttcGAACTACCTTATTAAaggaatattactaggcaaatA
TTAAGCAAGcttgaaatttcatattaatTCGTGTTAGTTacatttcttct
tattttcgtgtaataagttatttttcatttagcccaggaattattttttc
aattcaaaaaaatgatttttcaaaattttcaatactcaaaaagatggaaa
atttcaagatatagtagggggaattttgttcgattttttggaatcgcttg
actgttttgttaaagcacttgttatacatttttggaaagctaaggggtag
gggaatcgaaattactatgcttccaattttttttcggacactttggtgtg
attttcagacaaatatgacggtctcaggcaaaaatcatagggttcaaaat
taatgaaaattttagctcgagaaaacagagacctgttgtatatttttgga
aagctcttaaaaaattaagattagagatatattgcaagtataggtgattt
ctgtacctaactcgagatattaaacccttgaaaaccgtgtttttcagcca
gaaacagctattttgtccagtttttgcgctttttgaagctcaatatcttg
agttaggtactgaaatcacctatacttgcaatatatctctaatcctaatt
ttttgagagctttccaaaaatatacaacaggtttctgttttctcgagcta
aaattttcattaatttttaaccctatgatttttgcctgagaccgtcatat
ttgtccgagaatcacaccaaagtgtccgaaaaaaaattggaaacatagta
atttcgattcccctacccattagttttccaaaaatgcataacaagtgctt
ctaacaaaacagtcgagcgattttacaaaatgccctctactaataATAAA
ATTATCCTGCATGGAAACTAAAACACAGTCAGACAGAGAAAAGAAAACTC
CTGCCATACATTTATTTACATAATATTTTACGCACCACTCACTTAACTTA
TcataaaatctctaaaaagccctaaaaactttcaatttcaagtTGTATTT
TATAGGAATACAAACAGCAAAATTTAGCCATGCGTGACAGTGTGCGAAAG
ATTTACAGTGGGGAAAGGGTTATCTCCTTTAGCCAAGAAGTTGAGGCAGG
ATCTTTTCACATATTTGATCATATTGCTGGAGTTTCTAATTAATCAACAA
GATATCTTGattatgattttaaaaagaaaagttgtattAAATTAGGATAT
AATCCTAGGTATTGCCCGGATTTGTTTTAGTCACTTGGTACATACCTTAT
TTTTTGAGAGAGAACTGATTCTGTGTGATATTTACACAATACATTATGGC
AGGACCAATGTATTTATGTTGACAATGATGTTTGATTTTTAACAAATCAT
TTTGTATCCAGGCATAGCTCATCTTGAACCCTaatgttttttcaaattca
gttttGAATTTATGATAATGATTAAATAGTTTTTATTCTATGACTCGAAC
AGAGTCTTCTAGATGGCACTAAAATAAATTTGTTGGATTTGTTAACAAAC
GATTGTTTTTCAAGACCAAAGTTTTTTAGAACTTATTTCAAAAATGTGTT
TGCGTTACGACCACATTTTGAACATTTATCTTCTTGGAAGGTGAGAAGCT
TCTTTGTCATCATGGAGTTTCCACCCTAATGAATTCGGAAACATAACATA
AATTCGATGCAAATCATTATAGTAAATAAAGTTTGAAATTGTGTTCAGCA
AGGTAATTTCCTCTTTTTTCATCCTGTGAGATCCCTTAGATAGCCAGAGA
TTTTAGTAGTATATTGAACCTTGCATTTTGAAACTTGCATAAACAGCCTT
TTTCAAGGGTATCCTTTTCACTAATGGGATATGACACTTTGGTCCTTGAT
TTTGATGGGATATTTGTCCCGGTTTTTGGTACTGAGCGCTTGTTAATGCG
CCATGTGCTTAATGTAATATaaatttatctgttttttttagACACACTGT
ATACAAAATCCAGACTAACAATGCAATCCAGTGGCATCCTTCAAAGAATC
TACAccgttaaaatttaaaatacttaaaataCTTATCCAACAAACTAAGT
AGGAAATGGACATGCTGTGACGGATGGGAAGATTTTCATTTCAGCGCCAA
CCAGTCGGACATAACACATCAATATCTCAAATTCATAGACCTACATATTT
TTTACTAGTTCAGTGTCAATTTTATGCTCAGGACCTCGTGAAAAAATGAT
ACCTTTagagtagaaactttcgcgaggctgcaaaatcgcgaaattacgTG
AAGCTAACTTTCGCAAATTTTACTTTTGGAACGAATTCAGCGGATataac
tttcgcgatttttagaatgttattttattttgaaaaagcgagaaaaatgc
acaaaaactgaaaactgagtatgaaatatcaagaaaaggcagaaactttc
gcgaaaaaggccaaaaatcgcgaaaatcacgaaagtttctgccatcgaag
tttctgcccttaaagtagacATTACCCATGAAATATGCCCATGTGACGAA
GGATTATGTCCGCTTAGGGTATCTTAGAATTCTTTATCATAATAATTCTC
TCTGATGTTGTCTCAGTCCATCATTGTATGTTGTACTCAAATAATTGAGT
GTCAAATACCGGTTCTTGCTCCCATCATTCCCTTAGCATCAATGAAATTT
TTCATCATTGTTTATTCGAGGCTTTTCTGGCCAGTTTTTTCCCAATGGTA
TGAATGTGCttcataaaaacttttttctgaagtatttttctttgttatGA
TCATCGCAGCactcttatttttcaaaattgtggaaacttcattcattttt
atttcgcCCTTCCTGCTttcaattgaagaaaaaaagaaaaaggtgaAATG
TTTTCCATTTGAATGTCGATGTCTAATGTTAAGGGTTGGAGATTCTTTTA
CGACAAAGTGAAATCAAAAAGTAGAAATAGTTTTTCTATATTTTGAGGCT
CAAATATTCCTTCGTCATGCCCAGTTGTATCTGAGAGAGAATTCTTTCGT
TAAAAAAAGATTACTGGCTGaaatgattttaaatttaaagtattttaaat
gtcatgatttgattttttatttatcatttagtgaatcaaagagaaaaata
aaaaaggatataaaatataaagaaaGGGGAAGATGAGGCCACTGAACAAC
AACAGCCTGGTCAAGAAATGTGAAGTGGAAACTCAAAGACTTTTCCAATT
GTTTCTGACCGTTGGAGAAGATTCGCACAAGTTTCAATCCTCAGAAACTG
ATGAAGGTAAGAAGCTTTTATCTGCCATTTATTGTTAAGGTAAGCTAAGA
TTTCGTTTTCTAAGATTTTTTCCTTAAATTGAATCATTTTTGCGTGGTTT
TGATTTGGCGATCGGCAAAAATTTTGAGACGGTTTGAGACACTATATTGg
ctgaaaaatttttattttgtatactATAGTCGTATAGAAAGTGATTTTTC
GCatagtgttttttttctcgaacaATTTAGAGCATCGCcgatttgtttta
attttacgCGGGGATTTGATTTAAGcgaattcgccaaatttaatccccgc
taaaattaatccactaaaggttttactatttttattcaTGGTAGAATTAC
TTGACTGGCAACGGCTTTTAGTCCCCACCTGAAGATGTTGAAAAACTATT
GATTTCCTAGGGTGAATTTTGTACCTTCAATGCTGGCTCACCATGGGGGA
CGGTTACTTCCTCTCTCTAGGGGATTTTCCTTCCAGCAATAATTAAAACA
TGAACAAGATGTTTGATCAGTTTTTCTGCGtgaatataattttttcaatG
GATATAATTGAGAGTGTATGGTTTTGCATTTTGCACACTTATCCTGAGGG
GAAAGTCTCATAACTGTTCCAAAgacaaacatttcaaacaaacgtagtTT
ATTGTTGTTATAAACTTTTCAAAGTTCACAAATGTTTAGATTTTATTCGA
ATTGTAAGTTTTTCTTGTTGAAACGAGAActtaatgtttttgtttgatgg
TCTGTGTGACGTCACGGATTTTGTATAATTGTTGTTCGAGGTGCGTCAGA
AGGATTGTGTTAATGTGAAAAACGTGAAGAAAATTCGCACGTTTTTTCTT
TGCAGGATAAGAGAATGAGAGTTGTCAATTTGCTTTAATTTGTAAGTTAT
CTGGGAACTGTTACAGTACTTCTCTACCAAAATAATACATTTTTAGTCGA
TGTGATAAAGTCGAAGCAAACTGGAGAAATCACTTCAGGTTTTGTGTTAC
TTTTTAGAAGCTGCACCAGGTGAGTTTTGCTGGCAAATGAGAGAGGACTT
TGTTGGCAGCGGTTTTTCATCAATTGTATATTGTCTCCTTTACTTTACTT
TGATATTACAATATTACCATTCAGACCAatcatgatttttaaaacagAGT
CAGACACGAAAAACTCTTGCATGAActatgaaaaaattctttttattttt
tgtgtcACCAAGAATGACGGTGATCAACTTTGATAAGCATTTTAAAAGCG
CCAATTATTGTCAATGAATggtaaacttttaattttttataagatgctaa
aatgtttttaagtaGCTTTTTCTCCGTGATAATAATATCCTTTAATTTCC
TTTTCGTTTCAGTTCAATATTTCGTTCGTGAGAGGCCGTCGTCAGTTCGT
TCATCCGGCTCCTTTGGCAGTGCTTCAAACATCAGTTCACGAGGTCTTGA
TGATGCCTCGAAGTTTCAAAATGCGTTCGACCATCGGAAGCAAAGTGATG
GGATTTCCATACCCAACAGGAGTGGTAGCTCACCCATGATAAACAGTATC
GCTTATTCGCCAAACTTAGTATCCGATTCAGCGCGAACACCGCCCAATTC
TTTTAACGCTTCTTTCACTTCATGTACACCGCCCTCTTCATCACCTTCCT
TGAAACATGCCATCGAAAGAAAACGACCAAGCTCGTCTGACTTCTCACGG
TACAAGCGAACTGTCGCGGAAGGTCCATCCGCCGCTGCCGCCACCTTTAT
ACCTTTTCCAAGTGAACAGCAACGGCCGCGCTCGAATACAGGTCCAAGTG
AAGAAGTGTTGGCACAAACGGCACGAACCATTGCTGATATCGGTGATGAT
ATTGAACAAGAATACGGAAACAAAATGACGGTTAGTTTGACCACTTGTAT
GCACTCCGCCTTATTTTCTTCACGTGCTTTATACGCTATTAGCCAGTGGT
TTGAATATGGATCAGTGTCGATGCCCTTTTTCCTTCTTACTCCTTGTTTG
AAAACCCCTTTTTTCACTTACAGAAATTAACAACGGATTTGGTTGGCTTT
CTTTCGGAGAATACGTCGATGTCTTACGAAGTGTTTGCAGCGCACGTCAA
CGAGTTGGTTGGAGAGGACCGCAATTGGACCAACCTCGTGTTCGTCATGC
ATCTTGGGAAGCGAGTGGTTCGCACAACTTCTTACGCAGGCGAATATTTC
GGAAGATTCCTCGGAAGTGCTTTTGGTGAAGAAATCGCTCGTTCGGGAAG
CACCGTAAGTAGTTGTTATCTTTCCATTACTCACCCTTAACTTCTTTTAT
AAcgagaaaaaagaataaataaatttgaaataaggTATGGTATTTTGATT
GTTTGCAGTCTAATCGTTAAGCatttaatagacgatatcggcttaacgaa
attctccccgaatgattacccatgatgcattgcgcaaaaaattcagtaag
ttaatattgtccgtgaatttttttgcgcaatgcatcatgggtaatcattc
ggggagaatttcgttaagccgatatcgtctattaaatGCTTAACGATTAT
TGAAATCAAACAGCATAAGCTGGCcgttttgctgtgaaagaggaCTGATT
TTCAAAGATCATAAataaaaatcagcttttttagAATCCATTGGAGTATC
AAACTGtaatgaattgaaaaatcttttatatGGATAATTTTTGTAATAGG
ATCGATATGTTCGCGAGcattcgaaaaagaaatcctCTGCAGGGGAAGAA
GAAGGGTCAGCTGTTTGACGGCTATCGTGTTTTTAGAATGTTCAAAGCGG
ATTTACAATGGTGGAGATGACACTTGGCATTGACGCTGTCCGGTATAAAA
TCCtcgttttgaaaatttattggaATCATcacccaaaaatatttttatgc
ccCACATATAtgccttgaaacttttttgttaaTGGAGAGAAAGAGTTGAC
TGGATTCAGGCAATTTGTACAATTTTTACTATGAGAGAATGAAAATATAG
ATTTTTAGTTGACTTGAATTCAAGCGGATTTNTTTTAACGCTTCTTTCAC
TTCATGTACACCGCCCTCTTCCTCACCTTCCTTGAAACATGCCATCGAAA
GAAAACGACCAAGCTCGTCTGACTTCTCACGGTACAAGCGAACTGTCGCG
GAAGGTCCATCCGCCGCTGCCGCCACCTTTATACCTTTTCCAAGTGAACA
GCAACGGCCGCGCTCGAATACAGGTCCAAGTGAAGAAGTGTTGGCACAAA
CGGCACGAACCATTGCTGATATCGGTGATGATATTGAACAAGAATACGGA
AACAAAATGACGGTTAGTTTGACCACTTGTATGCACTCCGCCTTATTTTC
TTCACGTGCTTTATACGCTATTAGCCAGTGGTTTGAATATGGATCAGTGT
CGATGCCCTTTTTCCTTCTTACTCCTTGTTTGAAAACCCCTTTTTTCACT
TACAGAAATTAACAACGGATTTGGTTGGCTTTCTTTCGGAGAATACGTCG
ATGTCTTACGAAGTGTTTGCAGCGCACGTCAACGAGTTGGTTGGAGAGGA
CCGCAATTGGACCAACCTCGTGTTCGTCATGCATCTTGGGAAGCGAGTGG
TTCGCACAACTTCTTACGCAGGCGAATATTTCGGAAGATTCCTCGGAAGT
GCTTTTGGTGAAGAAATCGCTCGTTCGGGAAGCACCGTAAGTAGTTGTTA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041366XLOC_041366Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066057-exon-scaffold_45-1491911889:37209..37269TCONS_00066057-exon-scaffold_45-1491911889:37209..37269Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1510915933:37209..37269TCONS_00066057-exon-scaffold_45-1510915933:37209..37269Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1575043694:37209..37269TCONS_00066057-exon-scaffold_45-1575043694:37209..37269Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1491911889:49390..49564TCONS_00066057-exon-scaffold_45-1491911889:49390..49564Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1510915933:49390..49564TCONS_00066057-exon-scaffold_45-1510915933:49390..49564Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1575043694:49390..49564TCONS_00066057-exon-scaffold_45-1575043694:49390..49564Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1491911889:50921..51438TCONS_00066057-exon-scaffold_45-1491911889:50921..51438Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1510915933:50921..51438TCONS_00066057-exon-scaffold_45-1510915933:50921..51438Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1575043694:50921..51438TCONS_00066057-exon-scaffold_45-1575043694:50921..51438Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1491911889:53014..53259TCONS_00066057-exon-scaffold_45-1491911889:53014..53259Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1510915933:53014..53259TCONS_00066057-exon-scaffold_45-1510915933:53014..53259Clytia hemisphaericaexon
TCONS_00066057-exon-scaffold_45-1575043694:53014..53259TCONS_00066057-exon-scaffold_45-1575043694:53014..53259Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_45supercontigscaffold_45:37209..53259 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.0348	16.7696	10.9363	11.024	28.1254	18.5369	16.753	24.5558	10.0267	1.87368	7.18716	7.05904	9.92935	7.82194	8.43692	13.1546	11.2505	5.31854	0	0.000219079	11.1161	10.2553	21.6045	24.9821	9.07376	11.5801	19.7476	18.419	26.1447	30.6326
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066057 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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