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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066030 ID=TCONS_00066030|Name=TCONS_00066030|organism=Clytia hemisphaerica|type=transcript|length=1050bp
ATCCCCCATTTGGACTATTGTTCCCAGCTTTCGAACTCACAAGAAAAGGG
CCTGATCCAAGGAATTGAGgctgttcaaaaaatcaattacaCAGCAAACC
AAATATGTCAAAGCATTGAGCTACTGGGAAAGACTGAAGGAGCTTGGAAT
GTAAAGAAAGATAAATCATCATTTAAACTTGGCATCCTAGAAGGCTTTAG
CTCCAAATATTGCAATTGATTATGAAACGGAGAAAAGGGGCATTATCAGC
TATTTCAATGAGAGACAAGGAAGGAAGTGTTTCATCCCTCTAATGAAGAG
AAGTCCCTTTCAACGCCAAGTCTATGCATCCATTCGTATGCAGGGACCAA
AATTCCAGTACCAATCAGATATACTTTTCATatgtacataaaaataaaaa
atgcttgaTTTAACAAAAAATCCTAGCTGGAAAAAGAGTTTGTAAATATA
AACGTGATATATATGGTAGAACAAGCTCAAATTAGCCTCAATTCATAGAG
AAAACAAACTGCACtaacaaaaaactaaaatataaaaacattcctCATGG
TCTTCAAGTTttgaaacaaacaattttcggcatatttccATTGAACGTTA
CAATTTATTTAGTGCAACAAGCCCGTGTCGCTTGATAAATTATGCATATT
CTATAGGTCTAGAATGGGTGATTCTCAGATAAAATATGCCGATTACGTCC
GCGGAGGAcgttactttttaaatttaactTAACTTTCTTAGACAGAAGCA
AAGGTTCAACCTACCAGAAACTAACACCACTGTGCCTAACCCACATTGCT
AAAAGCACATCACTGAAAAAATTACGCATATTCATGCACATTGGTTTGGG
AAAAGAAAACGAAGAATTGTGTAGTGAGTAAAGAAGCATTGTGTTTAATG
AGAATGAAAAGCttgcaaagaattgaaatcattggaGTCATGCCTAATGT
TGGTTTGATTACCTGACACTTGATGGTGCTACATGGTTGTGCAATACACA
CAAATTGCAGACGTTTTAGATAACACCGTACACACTAACAAAAATGCCAN Run BLAST on NCBI transcript from alignment at scaffold_448:840469..841518 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066030 ID=TCONS_00066030|Name=TCONS_00066030|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at scaffold_448:840469..841518 (Clytia hemisphaerica)
NTGGCATTTTTGTTAGTGTGTACGGTGTTATCTAAAACGTCTGCAATTTG
TGTGTATTGCACAACCATGTAGCACCATCAAGTGTCAGGTAATCAAACCA
ACATTAGGCATGACtccaatgatttcaattctttgcaaGCTTTTCATTCT
CATTAAACACAATGCTTCTTTACTCACTACACAATTCTTCGTTTTCTTTT
CCCAAACCAATGTGCATGAATATGCGTAATTTTTTCAGTGATGTGCTTTT
AGCAATGTGGGTTAGGCACAGTGGTGTTAGTTTCTGGTAGGTTGAACCTT
TGCTTCTGTCTAAGAAAGTTAagttaaatttaaaaagtaacgTCCTCCGC
GGACGTAATCGGCATATTTTATCTGAGAATCACCCATTCTAGACCTATAG
AATATGCATAATTTATCAAGCGACACGGGCTTGTTGCACTAAATAAATTG
TAACGTTCAATggaaatatgccgaaaattgtttgtttcaaAACTTGAAGA
CCATGaggaatgtttttatattttagttttttgttaGTGCAGTTTGTTTT
CTCTATGAATTGAGGCTAATTTGAGCTTGTTCTACCATATATATCACGTT
TATATTTACAAACTCTTTTTCCAGCTAGGATTTTTTGTTAAAtcaagcat
tttttatttttatgtacatATGAAAAGTATATCTGATTGGTACTGGAATT
TTGGTCCCTGCATACGAATGGATGCATAGACTTGGCGTTGAAAGGGACTT
CTCTTCATTAGAGGGATGAAACACTTCCTTCCTTGTCTCTCATTGAAATA
GCTGATAATGCCCCTTTTCTCCGTTTCATAATCAATTGCAATATTTGGAG
CTAAAGCCTTCTAGGATGCCAAGTTTAAATGATGATTTATCTTTCTTTAC
ATTCCAAGCTCCTTCAGTCTTTCCCAGTAGCTCAATGCTTTGACATATTT
GGTTTGCTGtgtaattgattttttgaacagcCTCAATTCCTTGGATCAGG
CCCTTTTCTTGTGAGTTCGAAAGCTGGGAACAATAGTCCAAATGGGGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066030-exon-scaffold_448-1491911889:840469..841518 | TCONS_00066030-exon-scaffold_448-1491911889:840469..841518 | Clytia hemisphaerica | exon |
| TCONS_00066030-exon-scaffold_448-1510915933:840469..841518 | TCONS_00066030-exon-scaffold_448-1510915933:840469..841518 | Clytia hemisphaerica | exon |
| TCONS_00066030-exon-scaffold_448-1575043694:840469..841518 | TCONS_00066030-exon-scaffold_448-1575043694:840469..841518 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:840469..841518 . |
Blast
The following BLAST results are available for this feature:
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