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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066009 ID=TCONS_00066009|Name=TCONS_00066009|organism=Clytia hemisphaerica|type=transcript|length=1094bp
gtcagcactgacctgcgtcctgtgtcctgcctcctgggtcctgtgtcctg
cgtttcgaaccaaccgcAAATTTTGTTTGTCACGTATTAAGAGCGTAATA
TTGAAAATTTGCCCCTGATCTAAAAAGGGGTGCCCTACAAAGACCTGTTT
TAACGCTAggttaatttttctcaaatgttTTAAGATTATTTTACAGAAGA
AATGAAGTTACTGATTTGATTGTCTTTTTGCACTGCCTCACATACAATTG
TAAGTATGTGCCAGACTATAATTATTGCTTTTTGTTTCACACTTCTCACT
GGTGTTCTGGTGTCGATTCCAGCCAAGTCATTTTTTAGTTCTACAGAAAT
GCCcgctttgaaaaaatcaaaccatTGAAATGTGGTCAAATTTATTACAC
TTTGCCAAatcaaaacacaagaaaaaaatcatatgaAGTATGACCACTGC
TTTTAATCACTCCAACCATGATCATGGATATCACATAGTGCAGCGTGATG
TTTTTGCCTTTCTACATTCtagattattttgaattttgaattttttttca
acgtCTGCACTCAGTATTTTCGTGACCTCTATAGAATCAACAATCTTGCC
TGAGGGGAACACCCGGAGCTCTCATGGTATACATACAGATAAGACATAAA
GTTCCCCCCATATCAAAGCAAAATTATCTCTCATGCATTTCCCATATTCA
TCCAGAATTTTCTCATGTACTGTATACATCTCCTGAATTTCtgtgttatg
aaaaaaatacctAATTTGGTTTTTGAGCAACACCAAGTtttcaggcaaga
aaaaaagaCTCCTTGCACATCTCCTGCATAATTTTCCCTAGCTTCCCTTC
TACAATAGATAGCAATCCCTGAGAAATTAGTACTGCAAATAACTTGTGcg
ctctctctctctttttttgcCTATTAAAATCAAGGTTAgtaacaaaattt
ttgcttaacTTTTTCCCTTTTTGTCATGCGTTTCAGTTTTCTTTGAAACT
GTCTTCCAATCTTCTATTGTTAATCTGTTATACCATTATTCGTCTGTAAA
TGGTATGGTATGGTATATTTCATtctccaaaatttacatttggc Run BLAST on NCBI transcript from alignment at scaffold_448:124136..125229 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066009 ID=TCONS_00066009|Name=TCONS_00066009|organism=Clytia hemisphaerica|type=transcript|length=1094bp|location=Sequence derived from alignment at scaffold_448:124136..125229 (Clytia hemisphaerica)
gccaaatgtaaattttggagaATGAAATATACCATACCATACCATTTACA
GACGAATAATGGTATAACAGATTAACAATAGAAGATTGGAAGACAGTTTC
AAAGAAAACTGAAACGCATGACAAAAAGGGAAAAAgttaagcaaaaattt
tgttacTAACCTTGATTTTAATAGgcaaaaaaagagagagagagcgCACA
AGTTATTTGCAGTACTAATTTCTCAGGGATTGCTATCTATTGTAGAAGGG
AAGCTAGGGAAAATTATGCAGGAGATGTGCAAGGAGtctttttttcttgc
ctgaaaACTTGGTGTTGCTCAAAAACCAAATTaggtatttttttcataac
acaGAAATTCAGGAGATGTATACAGTACATGAGAAAATTCTGGATGAATA
TGGGAAATGCATGAGAGATAATTTTGCTTTGATATGGGGGGAACTTTATG
TCTTATCTGTATGTATACCATGAGAGCTCCGGGTGTTCCCCTCAGGCAAG
ATTGTTGATTCTATAGAGGTCACGAAAATACTGAGTGCAGacgttgaaaa
aaaattcaaaattcaaaataatctaGAATGTAGAAAGGCAAAAACATCAC
GCTGCACTATGTGATATCCATGATCATGGTTGGAGTGATTAAAAGCAGTG
GTCATACTtcatatgatttttttcttgtgttttgatTTGGCAAAGTGTAA
TAAATTTGACCACATTTCAatggtttgattttttcaaagcgGGCATTTCT
GTAGAACTAAAAAATGACTTGGCTGGAATCGACACCAGAACACCAGTGAG
AAGTGTGAAACAAAAAGCAATAATTATAGTCTGGCACATACTTACAATTG
TATGTGAGGCAGTGCAAAAAGACAATCAAATCAGTAACTTCATTTCTTCT
GTAAAATAATCTTAAaacatttgagaaaaattaaccTAGCGTTAAAACAG
GTCTTTGTAGGGCACCCCTTTTTAGATCAGGGGCAAATTTTCAATATTAC
GCTCTTAATACGTGACAAACAAAATTTgcggttggttcgaaacgcaggac
acaggacccaggaggcaggacacaggacgcaggtcagtgctgac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066009-exon-scaffold_448-1491911889:124136..125229 | TCONS_00066009-exon-scaffold_448-1491911889:124136..125229 | Clytia hemisphaerica | exon |
| TCONS_00066009-exon-scaffold_448-1510915933:124136..125229 | TCONS_00066009-exon-scaffold_448-1510915933:124136..125229 | Clytia hemisphaerica | exon |
| TCONS_00066009-exon-scaffold_448-1575043694:124136..125229 | TCONS_00066009-exon-scaffold_448-1575043694:124136..125229 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:124136..125229 . |
Blast
The following BLAST results are available for this feature:
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