TCONS_00066007 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066007
Unique NameTCONS_00066007
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3106

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066007 ID=TCONS_00066007|Name=TCONS_00066007|organism=Clytia hemisphaerica|type=transcript|length=3106bp
TAAATTCAGAACATCAATGTTTCCATTTGTAAGAAAACATGACATGACAT
AAAACATTAGATGTAAGAGAAAAACGTGCACCCAAAAGATTATAATTTGG
GTATCTGGAACACTAATATAAATAGTCATGAGTTTTTTGTTTGCcaataa
aaataagacttttcgTCCAAGGAGAAGTATCCCAGAAGGAACACATCAAT
ATGATTTATTAAAACATGCTGAAGCTACTCTTGGATCAGGAAATCTTCGA
AATGCTGTGATGCTACCTGAAGGCGAAGATCTAAATGAATGGGTTGCTGT
CAATACCGTTGACTTCTTCAATCAAATTAATATGTTATATGGAACCATAA
CAGAAGAATGCACCCCTGAAAGTTGTCCAGTCATGTCTGCTGGACCGAAA
TTTGAATACCTTTGGGCTGATGGTACCTCTATTAAGAAGCCTGTAAAATG
TTCTGCACCACAATATATTGATTACCTAATGCAATGGGTTCAGGATCAGC
TTGATGATGAGACCTTATTTCCATCCAAGATTGGAGTACCATTCCCCAAG
AATTTTTTGAGTATCGCTAAAACCATGTTAAAACGTCTGTTCCGTGTTTA
TGCTCATATCTACCATCAACATTTCCCGCAAGTCGTCAGCTTGAAAGAAG
AAGCTCATTTGAATACGTCTTTCAAGCATTTTATCTACTTTGTGCAAGAG
TTTAATTTGATTGAGAAAAGAGAGCTGGCTCCTTTGCAAGAATTGATCGA
TAGGCTAATTAACAAAGCCTCTGCATAAATTCCTCTTGATTTCACCTCCA
TTTTTTACTGGAAGCTACACAATTTGTTATGAGTGATTATACCAAATGGG
AATCAAATTTTATTNTACTGGAAGCCACACAATTTGTTATGAGTGATTAT
ACGAAATGggaatcaaattttatttttggaatatttttgaatgcaTTCAT
GATACCGTATAATAACTGTAACTTTCCAAGAGCACCTTATACCAACTGGA
ACTAAGGAACTGGTTTATTGTTTTGCTTCGTTAAATCGTAAATTTTTACT
GGCTAATTACTCTGTGAAGTAGATAGATGTGTTATACTAAAATTGAGGAA
ACTGGTTACAGATGTTTGTAACCAAATGCCAAATTATTATGTTAATTCTG
ATggaatttttgccaaaacctTGATGtgataaaaaatcgaaaaatatttt
tttatatggtGGCATTATAACCCCCAGATGGATGATTgcgtaaaaaaatt
tttggttcaATTACTAAGCTGTAATTATGTTTGGTTGAAAAGCTCGAAGC
CAAGTCGTTTTGGTTTTTTGGTTTGTTGGTTTATGTTCAAATGTTTATAT
ATATAactgaaaaataacaattttgttTATAACTGATTTTACAGTAGTTT
GTAGTAAGTTTGGACAGAATTTTTAGAATGTGCTTAAGAAAATGAATCAA
GGCAACACATTTTTGTTCAACCAAAATANGTAAGTTTGGACAGAATTTTT
AAAATGTGCTTAAGAAAATGAATCAAGGCAACACATTTTTGTTCAACCAA
AATAGTACTGTAGATTTTGCCAAGGACAAAAATTATGACCAGCTGCGGat
ttttttaattcactttCCAATGGTATGTAATACATCTAAGCCTAATTTTT
TGTCAACTATTATTAAAATTATACAGAACTATCTTGTGGACGAGTTTAAG
ATAGATTGGTTAAGATTTAATTCAGCTTTTCCTATCAATTccagttttta
tattttttgtctttGGTATTTTATGAAGTACTATAGTTTTCAATTGTGGC
AAACTCATTCTAAAGCACAGTTAAGTCTCGACTTGAATTTAATTGATAGA
AAATCCTCTATAAAAATTCTCTCTAAAGATGTATTTGTTTAACAGTGATT
TAACAGGGATAAATTaaacacaaaaaataatattcTGGGATTCTACAGTT
ACTTTACTTGTGAGATGACTTAATGGGGTCATCACTTGATGTGTacgaaa
ataaaattctcaaaaagcatttattgtttttttctttcttctttaatTCT
ATTGAAGTATGGTTTAGGAATAAGGTAGGATAAAACTTGGGATTAATTTC
AATCTCATGGATTTTAGAGAGCATATGTTTTTCTCTCATCGATCCActta
ctttttatatttttttgctcGAACATTACGTCACCCCTTAGATTACGTCA
TATTCCCTTACTAAACTATGACGTAATAATCAGTGGCTTTCAGTTTGTAA
ATAGTTAAACGAAAGTTTATCACCATTCGAAACAATGTTCTTCTGTGGTC
CTTAGAATTTTAGTCTGTATCGCCGCTTTTGAGCCTGAATTaaagccggt
ctccactttcgtgcaaaatgagcgaaaacttcttgacgtttttgtaaggt
ctttggtcggttgaaaaatgaagcaattccattgggcaaatctgacgtaa
cggtttaaaaaagttgaacttctttcaactttttaaggccggtctccact
ttcgcgcgaaagtaATCTTATGCAGGCAAAAtcgattgaaaaaaaaggtt
tcgCTCATTtttgcgcgaaagtggagaccgacctTTAGCGGGAATTTCCC
AACGTGatcctattcatgatatgcaccactggagagtcttctgagaactt
ttaaaattttccacccaatacgtcatttaaacaataaaaaacaatgacgt
attgggtggaacaaaaataaaaaagtgaagTCATTGCactggtgcatatc
atgaatttgacGTAATATAATAAGGAACTTCAATACCATTACATAATGTT
ATCAGCGTTccgtatgtttttttttttgttttatttgaaaataattaatt
gATAAATAATTAGTTTCATAAATAGTTTTTATGAAGTGAACTTATTTTTA
TGCTAAAACTAaatgattttttagaaaaaatacaaattttcttttttttt
gtttcatttttttttcttctttaattaTTCACTACCTATATATTGCACTT
TTTCATTCTTTCAAGcgattttttataacttttttgttgttgtttagttt
aatttcattctatcattgttagctttaaaacttaaaaaatacttttcttc
CCTTTA
Run BLAST on NCBI

transcript from alignment at scaffold_448:761233..773156-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066007 ID=TCONS_00066007|Name=TCONS_00066007|organism=Clytia hemisphaerica|type=transcript|length=11924bp|location=Sequence derived from alignment at scaffold_448:761233..773156- (Clytia hemisphaerica)
TAAATTCAGAACATCAATGTTTCCATTTGTAAGGTAAATATATACCCGTT
TCACCGTTGATGTAAGTTTTGGGTTTACCTAGTGGATGAGCTACCGTGAG
ATCGGGTAACTTGCATCAGTGCCAGTGGAGGCTAACATACATAGCCCTCA
AATCAAATGAATGACCTGGCTGGTCATTAAAATATAAAATTAAATAAAAA
AAAAAAATGGTAGAGTAAAGCTGCAAGCGGAGCTGCGTAGTTCATTTGTT
TTGAAATTTTGCTGCATAGATTGTTCAGTCATTTGAGGGCTATGTCCAGA
CGATGTCAATCGAACAACTTCGAATAAAAATCGCAATCGAACCAATCGAA
CATAATCGAACGCGATCGAATAATTGCGATTCGATTGTCGAACGTAATCG
AATCTCAATCGAACGGCCGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTGGGTAATATTCGATTG
TGTTCGATTGCGTTCGAGTAAGGTTAGATTGGTTCGATTAATAGTTGACT
ATGTTCCATTGGTTCGATTACGATTATGTTCGATTAGTTTGATTGCGATT
AAATTAAATTGGATCGCTCTGTTAGAGCTTTTTAGCGTGGGGCGGCCGAG
CGCTTATTAAGTATAGTACGAAAGCGAATAAAATCTAAATCATTTCAATC
GAACGTACTCGAACATAATCGAATACAATCGAACGTAATCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNAGCAATCGAACGGCAAATCCTGGG
TAATATTCGATTGCGATTCGATTGCGTTCGACAATCGAATCGCAATTATT
CGATTGTGTTCAATTGCGTTCAATTGCGTTCAATTGATTCGGCGTTCGAT
TCGTTCGATTGACACCGTCTAGCTATGTATGTTAGCCTCCACTGATGCAA
GCAAGTTACCCGGCGATCTCACGGTAATAGTTTTAAAACAGCAGACTTTC
CTGGTCTGTTTATATATGTTTAACAACCTACCTACCTATTAACTACTGTC
AACTGCTCTAACTAGGGACGATTGGTCGAAACATGGGACTATTGCATATC
TGGTCTGTTCGGTGAAATGGTGGCCAAATTGCCGTCCCATGTTTTGTCAG
GTAGTCCCTTGAAGTTAGAGCAGTTGACGGTACCTATTTGTGGCTCCTGC
TTGAACAGCTCATCAAACAGCTTGGTAAATACCGTGTGTTTTGCTTTTGA
TACAAATAAGCTCTCGCTCACATTCTTTTTACACCCCCTGATAGCTGACA
ATTAGGCTAGGCTAGACTTACCTCTTTTCTCTTTTCCATTCCAACAGTAA
AATGCTTACATAGTTGACACATAATACACACCGACAGAAGTATTCTCCAT
GCAATAAAAAAATTGGCAATAAAAAAATCTGCAATAAAAATAAAACAATA
AAACGAAAGGTCTCTTCTTCTCAGTTGCTTCGGTACGTCGGTCGTTGCTT
CTTCGTAAAGACGAAAGACAGATCTGGACTTATTTCATACTTTCCAGTCT
CTTGTTCGTAGTTTTTCTGACTTTCTGGTTCTATGTGAGTTATTTTCTAT
GTTTTCTAACTTACTGAATGACTTACCGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTGTTTCTG
ACGGCTATTTATATTGTACAAACTGCAGACCANNNNNNNNNNNNNNTTTT
CGAGCTCCAACCCTAACCCTAACTGATAATAACCAAATTCCTAGCCAATC
TGATACGTAACCACACCCAAACCACACCCATACCAAACCCTACCAGGTCA
CCTGCAGGTCCTGACACTATTCTCACATGCCGGATCTGAAAAATAGATAC
ATGTCTTTCGCCTTTACGAAGAAGCCTTTACTTCGCTCCATCGGAAAGTC
TTTTTTAAATTTCAACCAATGAGATTGCCGTGTATGATAAAGGTCAATAT
GACTGACCCTACTTTTTTGGCGCTAAGGCGAACCCGAAAAAAAATTTTGT
TTCCGGTCCACCGGCCGGGTGAAAATTTATTTCGTCGTCACCCGGCCGTA
TTTTTTTTCGTACATCATCGTTAGGGTTAGGGTTAGTTTGTTTGTTTGAA
AAACTTTTGTGAATCAGTTTTTGAGGCGTGTGATTTATCGCACGTGATAT
TTTATATTCTACTGTAAAATGCACGCCTAGAAATCACTTGGAATGAAGGT
TTTATCCTGATCATTGAAAGTTCCCTTCGTAATCACAGTTTGGAGCCTTT
AGCAATTGAAGATAAATATTCAAAATGAAAGAGAGTGTCCAGTTCTTAGA
GATATTGTAACACAANNATTTGAATAATCGCACGCCTAGACCACTATAAA
TCAAAATCTAGGCGTGCGATGATTACACATGAATTTTTCTTATGCCGAAG
CCTGTAGCGGTGTCAAGTTACTACAGATTTAAGGTAAAGAAGACCATCAT
CTTAACTTCTACGAGTGCTTTAAAAAATCGAGTTTTGGGATCGAAATTTA
GCAAAAAAAATTATTTTACGGCCAGCCGGGTGAGTGTTTTTTTCGTCACC
CGGTGGACCGGAAACAAAAAATTTTTTCGCGTTCGCCTAATGGCTTTTCA
GCGCCTTGGATAAGGAGTACCGTGAAGTCGGCTAACTTGCATCAGTGGAC
AGTTTAGTCACAATAGCGTCCTGCCAAAATGCATATCAAAGATTAATGCT
GCGAAAGCGCTATATCGTTTACTTGACTCTCAAGCAAAAAAATGCGCCGC
AAAACTTCTAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGCCAA
CCTTGAAAACTAATTTGAAGATCAACTTCCCAAGAAAAAGATCTACGGGG
GAGGCGGAACCCACCTGGATCCGTGCACCTCCGGATAGGCTATTTCCCGG
AAATTTTGCCGGACCTCAAACAATGACCCATTTACATGTGCGGAATTAGT
TTTACTTTAGCGTATAAACAAGGCCTTAAAAATCGAAGTGCTGTTTCGGG
AATTGAATGACAAAATTTGGTTGGTTGATATTCTGGCTGCTGCACGTTCG
CAATCTGTCATTTTGTCTCATTTTAAGTTTTCAAGTTTTAATTGATTGTC
TTGGGATCTTGAACTTGATTCAGGTATCATTCATCCTTGTTGTTGCAAAT
ACTACATCCTGTAGATAACTGATGTTGGTTTTTCTGAAAGCTTGATTTCC
TAGTGTGACTAACTGGTGGAGGCTAACATGCATAGCCCTCAAATGACTGA
CCAATCAAAGCAGCAAAATTTCAAAACAAATGAACTGCAGCTCCGCTTGC
AGCTCTACTCTACCATTTTTGTTTTGATTTAACTTTGTATTTTAAGGACC
AGCCAAGTCATTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAA
GTTACCCGACTTGACAGTAGTTATTTAATTTGTTAGTTATTCATTTGTTT
CAATCGTTGATTCTAAGAGATTAACTTTTTCTTATCTTTAGTACTCAAAC
GGGAAACACATATTCGGACTTTGTATCCTATGCTGCACGCAAGCACTTAA
GCTAAAGTCCCGCAAAAGCAGGATAAAAGTCCGTTTTTTAAGTTTGCAAA
AAAACGCCACATATAGAAGATCTTTCAAATTCAGTATGTGAATAGAGCAG
TAAAAAATACAACTTTTCTATTTTTCCTTTTTTTTTTGCAAAAGTTCTAG
GAATGAAAATAAAGGTATAATGATAATTGAATACCGTCAACTGCTCCAAC
TTGGGACGATTGGTCAAAACATGGGACTGTTGCATATCTGGTCTGTATTT
TCACTTACTGTAAAATCGAAAGAGAAATCGTGTATTTTTAAATACGCCGT
TCCTTAAGTCAAATCAAATGATTTTGGAGGTTCGGTGAAATGGTGGCCGA
ATTGCCGTCCCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTTGACGG
TACTATCCACTGATGATCTGCGGCACTATCGTAAAGCTAGAATTGCTTTG
TGTACTCTTCGCTTGAAAAAATGATTGACAGATTGAAGTTTTTCTTCCGC
GCGGGAGCTTGTGGGCTGTTGTGGGTGTTCTGCAAGCGTTCTCGGCTCAA
TCGTCGGACTGCGCTAAAAATGGTAGACGTAGCCAGACGTAGCTGTGATT
GATCATTTTGATGGAAGTTGTTGGAATGTTTACAAGGCTCTTGACAGAAA
ATTGTTTGTTTTATTGTCAATGATTACATTGTTGTTATTAATTTTGGTTA
ATTTTGTTAGATCTGACATATTGATGTTTGTAAGTGCACTTCATAGTTTT
GATTCCCATTGAAGAATCATATTCTGGTTTTCATGTTATTAGATGCTGTT
TTAGAGCTTTAGAGCTAGCCTGTCAAGCAAAAGTGGGAATACTTACTTGT
TGCTTGTGACCTGCAAATTGCTCAGGTAAGATTCTTTGTGAACCACGCCT
CTGTTTGATAAATCTTTTGAGGGAAAAAGAATCTCAGCAGTTATTTTTCC
TTTCTGATTGGGTGAAAGGGCTTTTCCTTCATTTGATCGGATACTTCTCT
ATAAACAATTGTACGGCAATTTTTTGATTGGACAAAATAAAACAATCAAT
ATCGTCGTGATTGGATAATAAAATATTTGGCGCTTTCACTAAATCTTGAG
TGTGGGAAATCCCAAAATTGGTGAGCAATCATTTTTTACATCTTTTCTCT
TTGATCTTTTATTGGTTTCTCATGGCTCCGCCCCCCCCCCACTTATTTGG
GGGGGTGTAAATCTTAAATTGGCCTAAAAGTGGGTGGGAGCTGTCTCATT
TTTTAAACTCAGGGGGGACCTAAAAAAGTGGGGGGAGCTGAAGGGCTACA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGACCTAAATTTGTTGGGGGGACCTA
AATTTGTTGGGGGGACCTAGAACCCCATTCGGAGCCATGTTTCTTTTCAG
TTCTTTGGTTGATTTCTTGCGTCATCAATGACTTGCACAAAATTCCTTGA
AATGGAAACACACATATTTTACCAAGTTGCTTGAGGCGCTGTTAGCCGCT
GTTGAAGTTAGCTTGTCTACTAAATTAAAAAGAGTGATTGAAATAGTGGG
CAAGCAGTGGTTTGTCTAGAACAGTTGTGAGGAAGGTGTGGTTTTGTTTG
TAGTTTTGTTTTGAATACTTCTTTGGAACAATTTGTCAAATTTCTTATTA
GTCTGGTGGATAAACATAGTGTGCATATTCCAACAAATCTCCCAACCCTA
CATGCGGTATCCTCACGGGTGTTTACAACAACAAGCAAAAAATGGAAATA
CGGGAGGCACGATCACGATTTTGACATTCAACAGAACAAACAAAATTCAA
GATGGTAGACGGCAAGTGAAAAAAAGAGAAGCGAGAAAAAAAACTGTTTT
TGTTTAGGATAGCTTTCCTCTATCAAGAGGTGATTTCACAGGGGATTTTC
ATGAGAGTGATCCTAAGCATAAATAAAAGTATCATGCACTTACATTCCAA
TATGAAAAACAATGCACATTGTAGAGGGTACTTTTCAAGTCATTTCTAGA
CATTTCACTATCATGCACGGGGTCTATTTGAAAATCATTTTTATGAGAGG
CTTGGAATCATCGTAAACAAAGCCATTAACAAAGCCATTCTAAATGGCTT
ATACTAAAACCCCGTTCCTTTGTTCTGAAAATCCAAGAAAACCAGAGAAA
ACTAACCTTAGAATGTTAGGGATGCCATTTACAGTGGTTTAGAGAAAAAC
TATTTTCTTTATCCTTAATTAGCAGACTACAGATTACAGATCACAAAGCT
TCTTTTAAAGTGCAACTTTAAACACCCAGGAGATTAAAAAAACCCTAATA
CTTAAGTTTTCTTAGCAGCAAAACATGACTAAGAAAAGAATAATGAACCC
CCGTCCCAGAGTAATACTGAGAAATTTGGCGTGGAAATATTGATCCAATC
AGTGTGCCTACATTGCAAGCGCAAAAGCAAAATACGCATCAAAATATGAG
TGACACGTGCGATATCCGCGATGACAAAAGTAAATGTTAATTTTACTGGA
TTCATTTGCCAAATTAAAGATGGCGGACAATGAAGTGTGTTAATTCCTGT
TTTTGCAGGTTTGTGATTTCACTTTGGTTAGGTGGGACCTGGAAACCCCC
TTGCCTGCCCTTGCACACTATGATAAAAGTACCATTTCTATTTAGTATAG
CGAATGTATTGATCTAATGAGATAAAATATATGTACAGTAACATTACTCT
GAGTTCATTATTGTACAGTCTGGGAAGGATGTTGGACAAGCGAGGGCCCT
GTTGAATTTGCGGTATGTACATGCACTTATATTTGTTACTTTTTAAATTT
GATCTTGGATTGTTTCTCATATGTCAACTTTGTGTCTAGGGTGACTTTGA
GGTCTTTATTTAACTTCTTTTTATTTTTGATTAACGTTGCTGTGTTGGAA
AAGTAGCAAGAACTTCAGGGTGTCGTTTTTCCCGTAGGCAAGGTGCTCAA
GTTTAAGACCATTCATCTGCATGTTGTTGTCTTTTGTCCATCTGTAAGAA
AATGTTAAAACCCCTGTTTTGATATCTATGAGAAATTCCGAAAATTTTCT
TCCATTCCTTGGAATCCAACTACTCGGAAAAAGACTAAGACCCCTGGACT
CCCTGGAAATGTTAATCCACAATTACATGGGACTGATATAAGATGGAAGT
GTCTATTGTCCATTGCACCATCAAACTTTTTTGGTAGGCGACTGTTTCAG
TACCAAATCATCCAATGTGTGTTAATTGTAAGCAACCTACGTTTTAAAAT
TTGTTTTGGGAAAGTTCCCAGACATCTGCACACAAAATTATGAGCACTTT
TCAAGGATTAAAGGGTCACAAAAATGAAACTCTTCTTTTAATTCAAGGCA
ATAATCATAAGATGAAATAAACATTAGAGGCGACTTAATATATTTAATAA
ATTAAATATTCAAAAATTACTACTTTCTGTATTTTAGAAAACATGACATG
ACATAAAACATTAGATGTAAGAGAAAAACGTGCACCCAAAAGATTATAAT
TTGGGTATCTGGAACACTAATATAAATAGTCATGAGTTTTTTGTTTGCCA
ATAAAAATAAGACTTTTCGTCCAAGGAGAAGTATCCCAGAAGGAACACAT
CAATATGATTTATTAAAACATGCTGAAGCTACTCTTGGATCAGGAAATCT
TCGAAATGCTGTGATGCTACCTGAAGTATGATTTTCTTTGATATTTTAGC
ATTTTCTAGTTGAAGAGGTTTACAGCATACAACTCCTATGTCTTTTTTCT
CAAAAATGACGCTTTCGATAACTTTTGAACACGTGAAGTAAATTTGAAGT
ATGATAGCTCAAAATTCAAGTTAGTCTTTCCTCCTTCGAATAGCAAAAAG
TTTTGATTTATAACATTTTCAGTTTTCTCGAAAATTAACTTCAACTTGTA
CACATTTTTGTATCACCCGGTACTTTTTATGGGACTAGTTTTATATAGCA
GAATTAATTTTTAAAGTGTAAGGGTGTCGCAGTAGTGTTTTTGCAAAACT
TATTTTGACAATTGAAAATCATTTTCTGTTGAAGCTATTTGCAACTTTTC
AGTCGCACTTAAATGTAAGCTTGGCTGAAAAAAGATTAGCCTCCCTAAAA
AATTTGTTGTTGCTAATATTTGTCTTTTCATCTTTTCAGGGCGAAGATCT
AAATGAATGGGTTGCTGTCAATACCGTTGACTTCTTCAATCAAATTAATA
TGTTATATGGAACCATAACAGAAGAATGCACCCCTGAAAGTTGTCCAGTC
ATGTCTGCTGGACCGAAATTTGAATACCTTTGGGCTGATGGTACCTCTAT
TAAGAAGCCTGTAAAATGTTCTGCACCACAATATATTGATTACCTAATGC
AATGGGTTCAGGATCAGCTTGATGATGAGACCTTATTTCCATCCAAGATT
GGAGTACCATTCCCCAAGAATTTTTTGAGTATCGCTAAAACCATGTTAAA
ACGTCTGTTCCGTGTTTATGCTCATATCTACCATCAACATTTCCCGCAAG
TCGTCAGCTTGAAAGAAGAAGCTCATTTGAATACGTCTTTCAAGCATTTT
ATCTACTTTGTGCAAGAGTTTAATTTGATTGAGAAAAGAGAGCTGGCTCC
TTTGCAAGAATTGATCGATAGGCTAATTAACAAAGCCTCTGCATAAATTC
CTCTTGATTTCACCTCCATTTTTTACTGGAAGCTACACAATTTGTTATGA
GTGATTATACCAAATGGGAATCAAATTTTATTNTACTGGAAGCCACACAA
TTTGTTATGAGTGATTATACGAAATGGGAATCAAATTTTATTTTTGGAAT
ATTTTTGAATGCATTCATGATACCGTATAATAACTGTAACTTTCCAAGAG
CACCTTATACCAACTGGAACTAAGGAACTGGTTTATTGTTTTGCTTCGTT
AAATCGTAAATTTTTACTGGCTAATTACTCTGTGAAGTAGATAGATGTGT
TATACTAAAATTGAGGAAACTGGTTACAGATGTTTGTAACCAAATGCCAA
ATTATTATGTTAATTCTGATGGAATTTTTGCCAAAACCTTGATGTGATAA
AAAATCGAAAAATATTTTTTTATATGGTGGCATTATAACCCCCAGATGGA
TGATTGCGTAAAAAAATTTTTGGTTCAATTACTAAGCTGTAATTATGTTT
GGTTGAAAAGCTCGAAGCCAAGTCGTTTTGGTTTTTTGGTTTGTTGGTTT
ATGTTCAAATGTTTATATATATAACTGAAAAATAACAATTTTGTTTATAA
CTGATTTTACAGTAGTTTGTAGTAAGTTTGGACAGAATTTTTAGAATGTG
CTTAAGAAAATGAATCAAGGCAACACATTTTTGTTCAACCAAAATANGTA
AGTTTGGACAGAATTTTTAAAATGTGCTTAAGAAAATGAATCAAGGCAAC
ACATTTTTGTTCAACCAAAATAGTACTGTAGATTTTGCCAAGGACAAAAA
TTATGACCAGCTGCGGATTTTTTTAATTCACTTTCCAATGGTATGTAATA
CATCTAAGCCTAATTTTTTGTCAACTATTATTAAAATTATACAGAACTAT
CTTGTGGACGAGTTTAAGATAGATTGGTTAAGATTTAATTCAGCTTTTCC
TATCAATTCCAGTTTTTATATTTTTTGTCTTTGGTATTTTATGAAGTACT
ATAGTTTTCAATTGTGGCAAACTCATTCTAAAGCACAGTTAAGTCTCGAC
TTGAATTTAATTGATAGAAAATCCTCTATAAAAATTCTCTCTAAAGATGT
ATTTGTTTAACAGTGATTTAACAGGGATAAATTAAACACAAAAAATAATA
TTCTGGGATTCTACAGTTACTTTACTTGTGAGATGACTTAATGGGGTCAT
CACTTGATGTGTACGAAAATAAAATTCTCAAAAAGCATTTATTGTTTTTT
TCTTTCTTCTTTAATTCTATTGAAGTATGGTTTAGGAATAAGGTAGGATA
AAACTTGGGATTAATTTCAATCTCATGGATTTTAGAGAGCATATGTTTTT
CTCTCATCGATCCACTTACTTTTTATATTTTTTTGCTCGAACATTACGTC
ACCCCTTAGATTACGTCATATTCCCTTACTAAACTATGACGTAATAATCA
GTGGCTTTCAGTTTGTAAATAGTTAAACGAAAGTTTATCACCATTCGAAA
CAATGTTCTTCTGTGGTCCTTAGAATTTTAGTCTGTATCGCCGCTTTTGA
GCCTGAATTAAAGCCGGTCTCCACTTTCGTGCAAAATGAGCGAAAACTTC
TTGACGTTTTTGTAAGGTCTTTGGTCGGTTGAAAAATGAAGCAATTCCAT
TGGGCAAATCTGACGTAACGGTTTAAAAAAGTTGAACTTCTTTCAACTTT
TTAAGGCCGGTCTCCACTTTCGCGCGAAAGTAATCTTATGCAGGCAAAAT
CGATTGAAAAAAAAGGTTTCGCTCATTTTTGCGCGAAAGTGGAGACCGAC
CTTTAGCGGGAATTTCCCAACGTGATCCTATTCATGATATGCACCACTGG
AGAGTCTTCTGAGAACTTTTAAAATTTTCCACCCAATACGTCATTTAAAC
AATAAAAAACAATGACGTATTGGGTGGAACAAAAATAAAAAAGTGAAGTC
ATTGCACTGGTGCATATCATGAATTTGACGTAATATAATAAGGAACTTCA
ATACCATTACATAATGTTATCAGCGTTCCGTATGTTTTTTTTTTTGTTTT
ATTTGAAAATAATTAATTGATAAATAATTAGTTTCATAAATAGTTTTTAT
GAAGTGAACTTATTTTTATGCTAAAACTAAATGATTTTTTAGAAAAAATA
CAAATTTTCTTTTTTTTTGTTTCATTTTTTTTTCTTCTTTAATTATTCAC
TACCTATATATTGCACTTTTTCATTCTTTCAAGCGATTTTTTATAACTTT
TTTGTTGTTGTTTAGTTTAATTTCATTCTATCATTGTTAGCTTTAAAACT
TAAAAAATACTTTTCTTCCCTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041330XLOC_041330Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066007-exon-scaffold_448-1575043694:773124..773156TCONS_00066007-exon-scaffold_448-1575043694:773124..773156Clytia hemisphaericaexon
TCONS_00066007-exon-scaffold_448-1575043694:764532..764769TCONS_00066007-exon-scaffold_448-1575043694:764532..764769Clytia hemisphaericaexon
TCONS_00066007-exon-scaffold_448-1575043694:761233..764067TCONS_00066007-exon-scaffold_448-1575043694:761233..764067Clytia hemisphaericaexon
TCONS_00066007-exon-scaffold_448-1510915933:773124..773156TCONS_00066007-exon-scaffold_448-1510915933:773124..773156Clytia hemisphaericaexon
TCONS_00066007-exon-scaffold_448-1510915933:764532..764769TCONS_00066007-exon-scaffold_448-1510915933:764532..764769Clytia hemisphaericaexon
TCONS_00066007-exon-scaffold_448-1510915933:761233..764067TCONS_00066007-exon-scaffold_448-1510915933:761233..764067Clytia hemisphaericaexon
TCONS_00066007-exon-scaffold_448-1491911889:773124..773156TCONS_00066007-exon-scaffold_448-1491911889:773124..773156Clytia hemisphaericaexon
TCONS_00066007-exon-scaffold_448-1491911889:764532..764769TCONS_00066007-exon-scaffold_448-1491911889:764532..764769Clytia hemisphaericaexon
TCONS_00066007-exon-scaffold_448-1491911889:761233..764067TCONS_00066007-exon-scaffold_448-1491911889:761233..764067Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:761233..773156 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.464727	0	0	0.462906	1.04597e-08	3.78209e-09	13.7953	9.54374	6.56687	9.89738	6.12023	1.01311	0.502835	0.50995	4.95367e-10	1.77057e-08	0	1.23958e-06	0	0	0	0	1.01345	0.140691	0	0	0	0
Blast
[Close]
BLAST of TCONS_00066007 vs. Swiss-Prot (Human)
Match: MOB1B (MOB kinase activator 1B OS=Homo sapiens GN=MOB1B PE=1 SV=3)

HSP 1 Score: 385.571 bits (989), Expect = 8.357e-126
Identity = 178/214 (83.18%), Postives = 203/214 (94.86%), Query Frame = 2 
Query:  128 MSFLFANKN-KTFRPRRSIPEGTHQYDLLKHAEATLGSGNLRNAVMLPEGEDLNEWVAVNTVDFFNQINMLYGTITEECTPESCPVMSAGPKFEYLWADGTSIKKPVKCSAPQYIDYLMQWVQDQLDDETLFPSKIGVPFPKNFLSIAKTMLKRLFRVYAHIYHQHFPQVVSLKEEAHLNTSFKHFIYFVQEFNLIEKRELAPLQELIDRLINK 766
            MSFLF +++ KTF+P+++IPEG+HQY+LLKHAEATLGSGNLR AVMLPEGEDLNEWVAVNTVDFFNQINMLYGTIT+ CT ESCPVMSAGPK+EY WADGT+IKKP+KCSAP+YIDYLM WVQDQLDDETLFPSKIGVPFPKNF+S+AKT+LKRLFRVYAHIYHQHF  V+ L+EEAHLNTSFKHFI+FVQEFNLI++RELAPLQELI++L +K
Sbjct:    1 MSFLFGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRMAVMLPEGEDLNEWVAVNTVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLTSK 214
The following BLAST results are available for this feature:
BLAST of TCONS_00066007 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MOB1B8.357e-12683.18MOB kinase activator 1B OS=Homo sapiens GN=MOB1B P... [more]
back to top