TCONS_00065962 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065962
Unique NameTCONS_00065962
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2994

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065962 ID=TCONS_00065962|Name=TCONS_00065962|organism=Clytia hemisphaerica|type=transcript|length=2994bp
CTTGAAAACTCTTGTTTCCTTaatatttgttgttgttttggtcAATTGTT
TGAAAACATGGCTGATAGTGACGTTCTCTCGAGAAGCAAAGGCCGCAAAG
GAGCTAAGTTGGACTTATGCCGGCGTGAGTTGGAAACCCTGCGTGCAGAG
CTTGACGAGCAGGAAGAACAAACGTTAAAACAGAAACGCGAGATCAATGA
TTTACGCAACACAAATGATACCCTGGAATCGGATGTCAACCGTCTCCAGA
AACAGAAAAAACGTATGCAAAATGAGTTGGACCAAATTAACGCCATTTTT
GATACGGAGAAAAGTGAGATTGCCGATTTGCAGGCCAAATTGAAACGGGC
TAACAAAATTGTTGCCGAGGAACGCCGAATTCGTGAACAATTACAAGAAG
CTAAATCAGATCTCATTATCGAGAAAACAAACCTCGAAAACAAGATGGAA
ACTTTAGAGGACGATAAGCGGGCATTAGACCGTCAAGTGACAGACGGTGA
GATCGCCCGCAAGGCGCTCCGTCTAGAATGCGAGAACCTTGGTGACGCAC
GGGATAACGCTAAATCGATGATAAACAATTTGGAGAAGGATAAAAGACAT
GCTGATATCTTGTTGGAAGAAGCACGAAAAACGAACGCTAGTTTTGAATC
ACAACTCGGAGAAGTAGAACAAAACTACATGACTCTTCAAGGACAAAACC
AAGCAAACAAGGAACAGTATGCAAGAGACATCTCACGAAAAGACGATAAA
GTCGAAGAATTGAAACGAGCTGTCGATAAAGCTGAACGTGATTTGAAGGT
GACCTTagaagaagagaaaaagaagCGTGAACAAATGATGGCATCACGTA
AAGGATTAGAATCACAAATCACTGGTCTACAAATTGAACTGGATGAGGCA
AACAGACGAAACGATGATCAACAAAAAGTCATCCGCAAATACCAAACTCA
ACTTGCTCAATTGAAAGACTTACAAATGGAGTTGGGAGAAATGAACGAAC
TGAAAGAAAGCTTATTACGAGAACTGAAGGAGATGGAAAAGAAAGCAAGA
TCAGCTCAATCGGAAAAAGACTCTGTTATCGCCAACCTTCAACAGAGCGA
ACNGAGATCAGCTCAATCGGAAAAAAACTCTGTTATCGCCAACCTTCAAC
AGAGCGAACGCGCTAAACGCGCGGCGGAAGACGAAGTGGTTGAGATGCAA
CAAGAAGTGGAAGCTCAAAAAAGTTTACTCAGACAACAGGCTTTGGACGA
GAAACGAATCCTTGATGATAAATATAACGAACTGAAGATGGATTATGATG
ATGAAAAACAACGAGCTGATGAAATGGATGTTAAAGCACGCAAATACCAG
AAAGAAGCAGAAGCAGCCAGCAGTAACTATGCCAACGAAAAAGACGAACG
AAAAACTTTGGAGTTACAAAAAGCCAAACTGTTGGctgaaaacaaagaat
tagaagaGAAATACTCCAAGTTGGACAGCACACTCAAAAATAAGATCCGT
GAAACTACAGATGTATTGGAGCGCCGAATGCACCAAATGGAAGTCGACCT
CGAGGGAGAAGTGAAAGAGCGCGAAGCCCTCAATAAAACATTGCGCCGAA
CAGAAAAGTCATTGACTGAAACCACTGCACTCATGACCGAAGCACAAGAA
GCTGAAGAAGTCTACAAAAGCCAGGCTGACAAGTTAACGAAGAAGAACGA
ACAACTTCGACGTGAATTGATGCAGGCTGAGGAAGATTTGAAGAGGTCAC
AATTGGGCAAAATTAATGCTGAAAATGAGCTAGAAGAGAAACAAGACGAA
TGCGAATCTTTGAAACGAGAATTACAACGTGCAAGAGGAGCAGCACAAGC
GAGAAGCCGAGCTGTTGAACTTGCCAGCGACGACGAACTTGAAGATTAAA
TCTTTGCTTTTTTTGCGGACCACAAGAGAAGATCAATAGATTTGCTAACA
TTGACAtaaatgaaccaatcaaatGTTGAGCACATTGATAAACTCGAGTA
CCGCAATTATTATGAACCTTGAATAGTGTTGATGGAGAAATATGAGCAAG
GCTTTTAATCTAAAGATAGCTACAATCAAAACATAGACTAAAAGCTGAGC
ACTCTTTCCTCAACTGGGAAAACAGTTCATTAAATATTAGAATGAAAAGC
AGATTTAATATCAACAAGTCCTGCCGCAGCTGACATCTTTCAATCTTCCT
GTATATTTAAAGGGTACATGACGCCCTATACGCCCCTTTTATCTACCGCC
CTTTAATTTTACACCCCTTAACAACATTTTCCAGATATTTCAACAATGAA
ACACTTCACAAGCTTCTGTATAGGAGAtataaaatggaaaaatggTACCT
CCTTGATTCTCAATCCGCTACTAAATAGATCTCAACAAAAGATTCAACAG
ATCCCCTTCCCCTTGGGTTTTCACAACATCCTATTAGGGCGTCATGCATA
TCCTTACAAAATTTTATCTTATAGCTAGgtctttataatttttttcttaa
attgaatttttgtgtTAGAGATTAGACGAGAAACTCTGTACCGTAGAATA
ACCACCTTGCTTTTGCACTGATTTCCTTTATCCTAAAAATGTTGCTGAAT
TTGGGAAGGGATCATTTAATATTTCAATTATTAAATGATCCCATCCCTGA
AGGTAGATAACGCCCTCCCTAATATTTTATCACAAAACTTCATATTCAAT
AAATATTACACtaaattagagaaaaatattgtcaaaGAATTTAGTCTAGA
AAGATATTATAttgttcaaaaagattttttgtaaagGTTAGGGAAAGTAG
AAAATGAGAGAAAAATCATGGTaccaaatttgaaaagtaatttttggTAC
TGGGAGATTTTAACtctattttcttcttttgaccaagcctattgtttcca
ttttggtttgtttttcaCATTTAAAACTTTGTCAGATTGATAAACATATT
TATATAAGAGCAAATGGaatacatacacgttttttatgagttct
Run BLAST on NCBI

transcript from alignment at scaffold_448:454513..467086-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065962 ID=TCONS_00065962|Name=TCONS_00065962|organism=Clytia hemisphaerica|type=transcript|length=12574bp|location=Sequence derived from alignment at scaffold_448:454513..467086- (Clytia hemisphaerica)
CTTGAAAACTCTTGTTTCCTTAATATTTGTTGTTGTTTTGGTCAATTGTT
TGAAAACATGGCTGATAGTGACGTTCTCTCGAGAAGCAAAGGCCGCAAAG
GAGCTAAGGTAAGTTTTGAACCAATCTCGTACCCAGAGCCACTTCCACCA
CTTTTTGATTTTTTACTAATGGACGTGATTTAAACTACTTTTCGTGAGCA
CTATCAGAATCATGAAGAAAGCAAACTAAGGAACTGGGTTTTAGTTTTCT
GTGTTTCGATTGAGTGAAAGGGTGTCCTGGTGTACCAAGAGAAATGTTTA
GAATGAGGTCAAAAGTTGTACCTGTAATTCTCTTAATAGCGTCAGGAAAT
TGAAGATAGGATTGTTTATAAAACATTTTGTATGAAGTAGGAACTACAGA
TTACAGACCAATTTTTGAATTACTTAAGGCTAACTACATTCGAAAAATAC
TGATCTGCAATCAGACCCGAAGTCAAATCTAACATAGTCTGAATTGCAGA
CCTCTATAGATATACTGCCTTTATAAGAAACTCTTTTCGCTAGAGGATGA
GCAGATCTAACATCTTACTCGACACAACCGACACAACACAATTATGCAAC
GTTCGACCTTTACTCGCAAACACTGTATTGAAGAAGAAGAATGAGTCTAC
TAGGGTTGTGATTCGTTCAATTAAGCGAAAACACGTCAATAATTGGTCCA
TAAATCTTGTCAGCTACCAAAATTAATTCGATCCCAAGTACTCATCTCGT
GATATAAGCAACATGAAAAATTATGATGCTAATGACATCTTGATTCTTAT
AAGAAATATTGCAGACTTTATACCGGGTGCGCCACAAAAAAGTTTCTCTC
TTTGAAACTGATTTTTTCGAAATCTAAGAATTAAGAAACAACAATTGCTA
TTCTATCAGAAAGAAGAAAGATAAACTTAAATTTTGATGGGTCATTTATT
AAATTCGATTCATGTGATCAAAAGTTATGCTCAATTGAATAAAAAAGTTA
CTTTCAGAAAGTGCCCGAAAACGTTAAAAATCGACCTGTTATCTCTTTCT
GGAAATCAAGAGGGTTGGACTTTTAAGGTTGGCTTAAAACGTTTAAGCAC
TTCATCCAAACTTAAGACAAGCAAAGTTTGTCACTAGAAACAAAATAACG
TCTTCTACTTTATGATGATGAAATATCTCTCAGATTTCAAAGCACAACAC
ATACCTCTAGCTATCTGGAACTTTTTTGATATCATTAACCCTATGTAATG
AAATTATTAGAGATAAATCTTCAACCTTTCTCAAGTGAAGCCTTAAAATC
TGCGCCGCATTTAGAATAACGGATTAAATCTATAGCGCTTTCTTTGTTTT
CACGTGGCATATTTTTCGAAATCTGGCGATAGATTTTACTTTCAATCAAG
CGTTCGTGTGAAAACCACGCGGGTCACGCATTTAGAATGGGAAATAAGTG
GCTTCATTTCCCATCAAGGAGTTTCGTGTCTAGCCCTTTCGGGCTTGGAA
GTCAATGGTAATACCGTAGAATCTTAACTAATATCTAATTTTCAGCGAGA
TGGATATTTTAGTACTAAATTTTGGCTTGGTGACTAAAATTATGACCGAC
TAAACTTTGGGTTGACTAAAAATTTGGGCCAAATCAAAAGTTTATAATTA
AGCTTTCCTTAACTTTCCATATCGGTATTACTTTAACAAAGTTCGGTCTT
AATTATTAGTCGGCCCTTAGTGACTAAATTTTGATGAGGTGACTAAAATT
AGGGCCGGCTAAGTTTTGGCCGATAAGGTAGCCAAAGGCTAGAGTCGAAT
TTCCTATGCAGGATTTGAAGTCACTTATTTTTAACATAAAATACACGACC
CGCGTGTTTTTCAAACAAATGCTTGGTTGGAAGTTTTCGTTAAGTTTAGA
ATGAAATATCGATTATGATCGATATCGAACGATTTTATCGATTACGACCT
TTAGGCGATTTTCCTCTCCTCATATAGGTCTCGTAAAGGAATATCATCGG
CTGGCTTAAATTAAGTCTTTGAGTCTTTTGAATTTTGAGTACTAAATTTA
GATAATATTACATAATTATCGAGAGAGTTATACTTTCACAATCCGANAGT
ACTAAATTTAGATAACATTTCGTAATTCATGAGAGGGTTATACTTTCACA
ATCCGATTATTATTATTTTATCCGGGAATCTAAATCATCTATTTTTCAAT
GCAAGGATCGAGTGACAAACAATGTCAATACATCTCAGCTTACAATGATA
ATCATTTTGATTTTTGACTTTTCTCGTGAGATCTACTAGTTTAATCAAAT
CGACATAAGTACTGATTTTTAGTGTTAAATCAAATCAATAGCACAGCCAA
CGACAAGCCTTTTGAATGTCCGGGCGAAGGTAGGCTATTATAATAGCTAC
CTACTATCTAACACCCGTCTTACACTCACTACCTAGTTTTTTTGCGAATT
AATCTCGCGGCTTTTTTCCTGAATATTGATATTATCCCCGTTTCGACTTA
TTTCCCCGATTTGGGAATACGAAAAATGACTGTCCTACAGTCTTGGCGAA
AAAAAATTTGCTTGCCTTTCTTGATCTTATATAGGCTGATATAATAGTTT
CAAACAGAAGAGACTTTCAGAGACATTTTGTTACGCTTGTTTTCATACAA
AAAGGGTCATACCTTTTTTTAACCTTTGAGGCTTAATTTCTCGTATAGAC
GCAAAAGAAAATGAACTCTAACACATATTTTGTGTGGAGAGCTCGTCAAA
TAATATACAGTTTCGTAGATAGAGAGTTAAGTCTAACTTAAGCTATCAAA
AACTTCATCGCAGAGGCACTTTATGCAAACTTTTATACAAAAAATATTGA
GCGCGATTTTAATCAATTTAAATCGATATAGAGAAAAAATTTTAAGTCGA
TTGAGAAAAGTATTTTTGGTTACAACTTGTAAGCTTAAGGAGATACATAA
TTTCTTTATAATAGACCATCTGTTGGTGATATATGGAGTTGTAGAATTTG
AAACGAGATGAAAAAAATGTTTATTAGATCTAGAATCACGGACAAAAATT
ATTGAGACTGTTTGAGTTTTTTTATTCCCTGCAGGATAGCTATTTTTCTT
GATTTTTTTCCACCTCAAATTTTTTTCGGGGAGCTTGAATGCTAAACTAA
GATAAACCTATGACTACTCCTAGATGGTATAGGATGCCTTTGCTGCCAGC
GAAATAGACTCTCGAGCAGTTATTGTTGCTAGGTTTATGATATGTAAATC
CTTTTTTTGCACTTTTTCTATTGTCTTTAGGTGTGAAAAAAAGACTGGGA
CGGTTTTAGGGTGGTAAAACGGACAAATAAATGCCCGCGCGGCAATTGGA
GGCTACAGTCAATAAGGTGTATTCCAGTCTTAATAATTTCTGTCCGTGAT
TTTAAAAGACGCAAGAACGCGGCTTTGCGTGATTTTGTGATGAGTAAACA
CTTATATAATGACCGTGAAAACTCGGTAATCCTAAGAAAGCTTACTGGAG
AGTATTTACGAAATGTTAGCCTGGAAACTGATTCACGTCAAGGGCCTGGG
CCTAAATTTGTAAGTGATTGTTATGTTAGTAGACTTGTTGTTGATTCTGT
TTGGTGTAAAATGAAGGGCCTACCTTGGATAATAAACCTTTCTTAGTATT
ATGGTCAGTAAATAACACAGCTTGGGAGTGGTCAAAAAGGGGAAAGGGGC
CCACAACTTGGCTATTTACTGTCCATTTCTAGTATTCAGAATAAGAGAAA
TCTTAGGTTTTGACTTCGGATTATTATCTTTTTTGACAATTGAAAGTATG
CTAGCGTTGATTAGAAGCTCCGATAAACTTTTCTTAAAAAAAACATATTT
TGAAATTGACTATTTTCTCTTTCCATCCATAGTCGTTTGCCAGTATGAGC
TAGAAGCTGTGGAAAACTTTTCTTAGTGCTAAGTAAATTCGGAATAGCGG
GATAAATAAAATCTTATTATGTTCTCTTTACATAGCCGTTAGTTATATCG
ACGTGAATTACAAGCACCGTGAAAAACTTTTCCCAGTGATTAGTGAAATC
GGAATAATTGGATTCTAAAATCGGATCATCTTCTCTCCCTTCATATTTAG
ACTTTTCTTGGTGATTACTAAAATCGGGAAAATCGTATTCTAAAATCGGA
TTATTTTTCTCTCTTCGTAGTTGGACTTATGCCGGCGTGAGTTGGAAACC
CTGCGTGCAGAGCTTGACGAGCAGGAAGAACAAACGTTAAAACAGAAACG
CGAGATCAATGATTTACGCAACACAAATGATACCCTGGAATCGGATGTCA
ACCGTCTCCAGAAACAGAAAAAACGTATGCAAAATGAGTTGGACCAAATT
AACGCCATTTTTGATACGGAGAAAAGTGAGATTGCCGATTTGCAGGCCAA
ATTGAAACGGGCTAACAAAGTAAGTTGTGTAATGGTGAAAATCCTTTCTC
GGTGTTGATCGAAATTCTCGCCCTAGGAAATACAAAGTCGTTAGGTCGTT
TTCTTTAAGAAATACTAAACACAGGACAGGAATGGACCAGGAATTGTAGT
TGTGGAGTTTTAGTCCGAACGAGCTATTGTTTTATTTCGAATTACAGAAA
TATTCAAATAATGGCTCGAATTAGGGAGAGTTGAGTGTAAAAGTTTTCAA
AACTAATTTTGACTTTTTTTCGACTTATAATTTTAGTATATACCTCATCT
CTTCATTCCGGTATTCATTCTTGTTTAGATTGTTGCCGAGGAACGCCGAA
TTCGTGAACAATTACAAGAAGCTAAATCAGATCTCATTATCGAGAAAACA
AACCTCGAAAACAAGGTATAAAGATTTCCCAAGGTCATATTCTCTCCGGG
CCCTCCTTATCAATATTGTAGTTATAGTGAACCATGCATGAATTATAAGA
TTTAATATTCTAAATCAATACAAATTTTTACTGCCAGATCTGTCAAATCT
TTCAGACATTGGATATTTACTAAAATCTTTCCAAGTCGATTTTACGTTAT
GTATTAATTTTTGTAAGCCATTCCTTTAAACTTACCTTTTTATAGATGGA
AACTTTAGAGGACGATAAGCGGGCATTAGACCGTCAAGTGACAGACGGTG
AGATCGCCCGCAAGGCGCTCCGTCTAGAATGCGAGAACCTTGGTGACGCA
CGGGATAACGCTAAATCGATGATAAACAATTTGGAGAAGGATAAAAGACA
TGCTGATATCTTGTTGGAAGAAGCACGAAAAACGAACGCTAGTTTTGAAT
CACAACTCGGAGAAGTAGAACAAAACTACATGACTCTTCAAGGTAAATCT
ATACTATCTAGAACTGAACATTACCGAGTTTATGTATGTGTGTTTTTCAG
CGACGGAGACGGTAAGGTTCTAATTTGGCTAGATCCTAACCAGCCGAAGA
CGACAGTAAATCAGTACTTTTACCGTCCTCGATTTTGCGGAACTGCGAGT
TATCCCAAATCGCTTCAGTCACTCTACCATCCTCAAAAGTGCAAAACATA
AATTCGCTATTACATGATGTTGCAGAATAGATTTGGATTCAAATTTAACA
AGAAATTGGTAAAAGTTAGGTGATTGACTGGCTCGGATACAGAGAGAGGT
TATAACCAATGGAGGAGAGTGAACTTTATTACCGTATTACCTTATATGGA
AACTAATTACTCTCCGTGAATAAGATAGCCTACCTCCTGTATCCGACCCT
GATTGACGATGAAGAAATCTATACCTTCGAAATGGTTAACATTAAACAAA
GAACTCATATTTTTCAAAAAAGCTATGTCGACGTTTAATATGAATGGCAT
AGAGTACAAAAAACCTTTTTACATTTCTAGGACAAAACCAAGCGAACAAG
GAACAGTATGCAAGAGACATCTCACGAAAAGACGATAAAGTCGAAGAATT
GAAACGAGCTGTNCCAAAATGGTTAACAATTAACATTAAGCAAAGAACTC
ATATTTTTCAAAAAAGCTATGTCGACGTTTAATATGAATGGCATAGAGTA
GAAAAAGCCTTTTTACATTTCTAGGACAAAACCAAGCAAACAAGGAACAG
TATGCAAGAGACATCTCACGAAAAGACGATAAAGTCGAAGAATTGAAACG
AGCTGTCGATAAAGCTGTAAGTTTACCCCCTATTCATCGCTTGTTTCTAG
TATTTTGTTACCATTCTAGCCACCATTCAATGCTTAAGTAGTAAGTAAGT
CTGCGACCGCAGCCGGAGGCGACCCGAAGGCTCCTCTTTCGATAACTATC
TACCCGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCTGGATTGCTCCATT
TACCCTTTATCCTTCTCTTAATTGCTGAGCATCCAGCAGAGAGGCATCAA
GTACCATTTTGGTATGACCCAGCTGGAGATTGAACCCACAACCTCGCGCA
CCGTAGTTGGATACTCTACCACTGCACCACGGTCGCATTATATGCTTAAA
GGCCAGGGTAACTGGTCCAGCATTTCATCCAATATACCATTTTTTCAAAT
GTTTGGTGAAATGTTGAACTGATTTGTGGCAATATAAAATTTTCAACAAA
AAACGAAAATTAAATTAAATTAAAACGAAGAAAAAAACGTGGTTGCTGGG
CATCAAACATTTGATCCAACATTTTCGGCAAGACCTGATCTTTAGTTTCT
CATCCAATATTGGAAAATAATGTTGGATTGAATGTTGGTCTGGCTTACTC
TTTCCTTTAAATATAAAACTGAATTATTTTGTATATTTACCATTATTAGG
AACGTGATTTGAAGGTGACCTTAGAAGAAGAGAAAAAGAAGCGTGAACAA
ATGATGGCATCACGTAAAGGATTAGAATCACAAATCACTGGTCTACAAAT
TGAACTGGATGAGGCAAACAGACGAAACGATGATCAACAAAAAGTCATCC
GCAAATACCAAGTAAGATATGACAAACAGTTTTTGTAAAGAACATTTTGC
CTTTTAATTCCTTCAGTACTGTGCAAAATTTAAAGATTGTTTCATCATAG
CCGCTGTGCGTCAACTTCAAATAAAATTTTCTTGGCTTTGGCAAAAGCAA
AATAGGTTATGTTAGGGTTCGGTTGAAAGCTCTTTTCAATATTTACTATT
TTGAATTAGGTCTTCAATCAAAATTACTTGTAATGAAAGCTTATTAAATA
CTGTTCCAAAAAAAAAAAAATCTGACAGTCTGCTCATAAAGCATATAAGA
TACGACGAAAAGTAATACCTCGTTGAAAAGATAATTTTAGGGCTTTAAAA
TAATTTACTTGTATTTCAAACCAATTCTTAGTTCCCGTTAGGTAAAACAC
TTTCTATAATTCGAACAAATTAGACCTCCAGTTGAGTTCGAATTAGCGAG
ATTTAATCGAAGTATACGTTTCTCTCATTTTCAGACTCAACTTGCTCAAT
TGAAAGACTTACAAATGGAGTTGGGAGAAATGAACGAACTGAAAGAAAGC
TTATTACGAGAACTGAAGGAGATGGAAAAGAAAGCAAGATCAGCTCAATC
GGAAAAAGACTCTGTTATCGCCAACCTTCAACAGAGCGAACNGAGATCAG
CTCAATCGGAAAAAAACTCTGTTATCGCCAACCTTCAACAGAGCGAACGC
GCTAAACGCGCGGTAAGTAAGATCTGATTTTAGTCTAACATGCTAGACAA
CTAATTCAGACATGGAAAGGACAAATTGTACTGTAAGTTGGTCTAATATG
CAAATCTAATATCGACATCCCTCGTCTGATTCCGACACCCTTCTTTAAGA
GACAGGAATAATATGAAAGCTTGAATCGCTGATTGAAAAAGGATTATTCC
TCACTGACCACTAAGCAAAGAAAAACAGTTTCAACCTTTCTATCAATTTT
TAGCTGATAAAAAGGGTTTCGGGATTAGATGAGGGATGTCGACATTAGAC
CAAATTACGGTTGCATAAAAACTGATACTATCCCGTTACAATTATAGTAT
TATTATTATAAGACAACGATATTGCTGTCTAATATAATCTAGACTTTCTG
TCTCCCGGTGTTTTCAGTTTTTATCCCGAAAATGAAGACATCGAGTTGAT
TCTAGTCGGCTCACTGCTGACTTTTGTCAAAAATCGAGGGAGGACAAGAA
AGAAAGTCAACCGTCTAAACTAGAAATAAGAAAATATGACGTGTATTCAG
ATTTGTAGACTTCTATATGATAGGCATGTACACATGATCACAGTGCAGGC
CGTTTTGGTTTAGCTTATATAACGGCCCATAAATGCTCTCGGCTTTTATT
TGCTTCTATGGGAACTATTTGTGTTTTTAAAATCCCCCCTCCATAAGCCT
TAGAAGGACTTCTTACCCTAATTTTTATTTCATTCCAAGTTGAATCTCGA
GTTTTTGTGATCAAACCTGTTTCTTGACATTCTTCTTTTCATTCACGCTA
GGCGGAAGACGAAGTGGTTGAGATGCAACAAGAAGTGGAAGCTCAAAAAA
GTTTACTCAGACAACAGGCTTTGGACGAGAAACGAATCCTTGATGATAAA
TATAACGAACTGAAGATGGATTATGATGATGAAAAACAACGAGCTGATGA
AATGGATGTTAAAGTAAGTTTCACCGAAAAGCCTGTTAGAAAAGATTGAA
TGATCGAGACATCCCTAAAAAGTTTCCCATACTAAAGCTTGTTGGAAAAG
TTTGAATGATCGAGACATCCCTGACTCGCAATTACAGTCTCACTATTTAT
CAATATTACCTAGAAATAACATAGGAAAAGACTTAAAACTAAAAGTAAAA
TTGTTGTTTAACGGATTTCCGTTTCAGTCAAGTATGTATAGATGCTTTTC
CGCTTTAAAATTCTGCATAGTTCCCAAAATTTCAAAAAACTTATGGTAAT
TTGCTGTGTAAAATCCATTTTTCGTCTCTGACGAAAAACCATGCTTTGGC
CACTGCATTTTACTTGCAGATGTTTAAATTTAACATCCCTAGGAAAAGAG
TTAGTTTACAACTTACATAGAAATTTTTTTCATACAATGGAGCCTCTTTG
ACTGGAATATCTCCTTAACTCGAACACGTTTTCTTGTCCTTTCAGTTAAC
AATGGCTTATAAAACTTACTCCATAACTCCAATTTTTTTTACTTCTAACC
CTCCTTTCTAGGCACGCAAATACCAGAAAGAAGCAGAAGCAGCCAGCAGT
AACTATGCCAACGAANTACTCCATAACTCCAATTTCTTTTACTTCTAACC
CTCCTTTCTAGGCACGCAAATACCAGAAAGAAGCAGAAGCAGCCAGCAGT
AACTATGCCAACGAAAAAGACGAACGAAAAACTTTGGAGTTACAAAAAGC
CAAACTGTTGGCTGAAAACAAAGAATTAGAAGAGAAATACTCCAAGTTGG
ACAGCACACTCAAAAATAAGGTAAGAACGTTTTTTGAACAACAGAGGTTT
GTACTCGTATTTGACCCTTTGCAGTCTTGGACGATATATAAAACCTTTGT
GGTTTTGACTTTGTACCATAGGCTTCTAACCCATTGATTTGAAAACCCCG
AAGTGGCTAGAGAGGAATCTTCAACCTTTCTCAAACAAGAAAAAGTGAAG
CTTTAAGATTTCCGCTGCTTATGGGATGACAGATTGAATCTAGCCTTTTC
TTTGCTTTTGCGCCGCATTTTTTCTGACTATGAATTTTACTTTTATTCTG
GCGTTTGTCTAAAAACTACATGCGTTTTTGGTGCAAAATAAGTGGCTTCG
TTTCCAATTAAAGAGTTTCAACTCCTGCTCCTTTGAGGCTTTGAACTCAG
TGATATAACCACTTTCCTTGTTGCATGGAAACTAGAGTTGTATTTCTATC
AATTCTAACAAGATTGTATGATAAAAAGAGGCTATTATATGTTGATTTAC
ATGTGTATGACACCGAATATTTTATTTCTCGATAGGCTGTCTAAAGCATT
TAAAAAGGCCTGGTACAGGCTCCGACCGAAGACGGAGACGACCCGAAAGT
TATCAACCCGAAGGTAGGGGAGGGCGCCATTCTTTCTCCCTGAGTTGCTC
CATTGCTTAGACGAATGAAACTTGTTGTTAAGACGTTTTAAGTCATTAAT
ATCCCATTGCTACTCTATTCTATTTTTAGATCCGTGAAACTACAGATGTA
TTGGAGCGCCGAATGCACCAAATGGAAGTCGACCTCGAGGGAGAAGTGAA
AGAGCGCGAAGCCCTCAATAAAACATTGCGCCGAACAGAAAAGTCATTGA
CTGAAACCACTGCACTCATGACCGAAGCACAAGAAGCTGAAGAAGTCTAC
AAAAGCCAGGTACTGATTTCTCGACTCAAAATCGAAACTTTCCCAATTCT
ATAGAATCATTTCATTGTCTTTCCTTACAATATCATCCTTTTGATCTACA
ATCACTGCCATAATATATTGGCACTTTTGGCTAATTTACCATTTTTCGAA
ATTGAAGTTCGAGCGAGAATTACTGAACTTTTGGATCCTCAGATCCTAAG
GTCCTAAGTCTTAGTTAAAACTCTACCCTTCGAACCTACTTTAGAGCACT
TTCAAATCGATTGTGGTTTCAAAACACCCCAGTGGATTTCCTTTTTGTGC
CAAGTATTTCGACACCGATTGTAGGTCCGTTTGGAGTAGGTAAGGAGTAG
GTAAGGAGCTCTGACATAAAATTCTCCCATTCAGTTAATAGAGGTTTTTC
AAGTGAATAAGTTACGTAACTTTCACTATCATTATGGAAGCAAATGTTTC
GATTTGCGTAAGGAGTCGCTTCTACAAATTCGAACGTTTGCTTCCATAAT
CTCTCAAGTTACGTAATTTTGTCAAAACTTAAAAGAGCTCTATATCTATC
CCTGATTCTCACCCAATTCGGCTAATGCATTCCCGATTTTCCCCGATTTC
AGGCTGACAAGTTAACGAAGAAGAACGAACAACTTCGACGTGAATTGATG
CAGGCTGAGGAAGATTTGAAGAGGTCACAATTGGGCAAAATTAATGCTGA
AAATGAGCTAGAAGAGAAACAAGACGAATGCGAATCTTTGAAACGAGAAT
TACAACGTGCAAGAGGAGCGTAAGTTAGCAACTGTCCGAGATTAAGTCGT
AAAAAGCTGTTAACTTAAAATTTGCGAGTTTGTCTGTGTGTACGTATGTC
CCGAATACTTTGGGTTAGCCTGGAGACTTCAATGGTGTTTAAGTTAGCTT
TCGCCTACGAATCGTTGAAATCCCCCTTCCCCGTCTAAACTAGCGCTGTA
TTTAGTCTTGGAAGATAGGTCAAATTCTTGAGGTTTACGAGATAAGCTTA
TTTGACCGTTTTAGAGAACAATCTAGAAGTCTGTTAGTTAAACTGTTAGA
CTAGACTGAAACCTATGCCATGTATTTCTTTCTTGATTTCTCTCATTTTC
AGAGCACAAGTGAGAAGCCGATTTGAAGAACTAGATTAGAATCTATACTC
TGTATTTTCTCTCCTTTTCAGAGCACAAGCGAGAAGCCGAGCTGTTGAAC
TTGCCAGCGACGACGAACTTGAAGATTAAATCTTTGCTTTTTTTGCGGAC
CACAAGAGAAGATCAATAGATTTGCTAACATTGACATAAATGAACCAATC
AAATGTTGAGCACATTGATAAACTCGAGTACCGCAATTATTATGAACCTT
GAATAGTGTTGATGGAGAAATATGAGCAAGGCTTTTAATCTAAAGATAGC
TACAATCAAAACATAGACTAAAAGCTGAGCACTCTTTCCTCAACTGGGAA
AACAGTTCATTAAATATTAGAATGAAAAGCAGATTTAATATCAACAAGTC
CTGCCGCAGCTGACATCTTTCAATCTTCCTGTATATTTAAAGGGTACATG
ACGCCCTATACGCCCCTTTTATCTACCGCCCTTTAATTTTACACCCCTTA
ACAACATTTTCCAGATATTTCAACAATGAAACACTTCACAAGCTTCTGTA
TAGGAGATATAAAATGGAAAAATGGTACCTCCTTGATTCTCAATCCGCTA
CTAAATAGATCTCAACAAAAGATTCAACAGATCCCCTTCCCCTTGGGTTT
TCACAACATCCTATTAGGGCGTCATGCATATCCTTACAAAATTTTATCTT
ATAGCTAGGTCTTTATAATTTTTTTCTTAAATTGAATTTTTGTGTTAGAG
ATTAGACGAGAAACTCTGTACCGTAGAATAACCACCTTGCTTTTGCACTG
ATTTCCTTTATCCTAAAAATGTTGCTGAATTTGGGAAGGGATCATTTAAT
ATTTCAATTATTAAATGATCCCATCCCTGAAGGTAGATAACGCCCTCCCT
AATATTTTATCACAAAACTTCATATTCAATAAATATTACACTAAATTAGA
GAAAAATATTGTCAAAGAATTTAGTCTAGAAAGATATTATATTGTTCAAA
AAGATTTTTTGTAAAGGTTAGGGAAAGTAGAAAATGAGAGAAAAATCATG
GTACCAAATTTGAAAAGTAATTTTTGGTACTGGGAGATTTTAACTCTATT
TTCTTCTTTTGACCAAGCCTATTGTTTCCATTTTGGTTTGTTTTTCACAT
TTAAAACTTTGTCAGATTGATAAACATATTTATATAAGAGCAAATGGAAT
ACATACACGTTTTTTATGAGTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041322XLOC_041322Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065962-exon-scaffold_448-1575043694:466979..467086TCONS_00065962-exon-scaffold_448-1575043694:466979..467086Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:462668..462916TCONS_00065962-exon-scaffold_448-1575043694:462668..462916Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:462272..462358TCONS_00065962-exon-scaffold_448-1575043694:462272..462358Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:461795..462041TCONS_00065962-exon-scaffold_448-1575043694:461795..462041Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:460971..461062TCONS_00065962-exon-scaffold_448-1575043694:460971..461062Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:460176..460337TCONS_00065962-exon-scaffold_448-1575043694:460176..460337Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:459475..459702TCONS_00065962-exon-scaffold_448-1575043694:459475..459702Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:458524..458685TCONS_00065962-exon-scaffold_448-1575043694:458524..458685Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:457717..457875TCONS_00065962-exon-scaffold_448-1575043694:457717..457875Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:456828..457007TCONS_00065962-exon-scaffold_448-1575043694:456828..457007Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:456068..456234TCONS_00065962-exon-scaffold_448-1575043694:456068..456234Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1575043694:454513..455665TCONS_00065962-exon-scaffold_448-1575043694:454513..455665Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:466979..467086TCONS_00065962-exon-scaffold_448-1510915933:466979..467086Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:462668..462916TCONS_00065962-exon-scaffold_448-1510915933:462668..462916Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:462272..462358TCONS_00065962-exon-scaffold_448-1510915933:462272..462358Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:461795..462041TCONS_00065962-exon-scaffold_448-1510915933:461795..462041Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:460971..461062TCONS_00065962-exon-scaffold_448-1510915933:460971..461062Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:460176..460337TCONS_00065962-exon-scaffold_448-1510915933:460176..460337Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:459475..459702TCONS_00065962-exon-scaffold_448-1510915933:459475..459702Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:458524..458685TCONS_00065962-exon-scaffold_448-1510915933:458524..458685Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:457717..457875TCONS_00065962-exon-scaffold_448-1510915933:457717..457875Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:456828..457007TCONS_00065962-exon-scaffold_448-1510915933:456828..457007Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:456068..456234TCONS_00065962-exon-scaffold_448-1510915933:456068..456234Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1510915933:454513..455665TCONS_00065962-exon-scaffold_448-1510915933:454513..455665Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:466979..467086TCONS_00065962-exon-scaffold_448-1491911889:466979..467086Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:462668..462916TCONS_00065962-exon-scaffold_448-1491911889:462668..462916Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:462272..462358TCONS_00065962-exon-scaffold_448-1491911889:462272..462358Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:461795..462041TCONS_00065962-exon-scaffold_448-1491911889:461795..462041Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:460971..461062TCONS_00065962-exon-scaffold_448-1491911889:460971..461062Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:460176..460337TCONS_00065962-exon-scaffold_448-1491911889:460176..460337Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:459475..459702TCONS_00065962-exon-scaffold_448-1491911889:459475..459702Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:458524..458685TCONS_00065962-exon-scaffold_448-1491911889:458524..458685Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:457717..457875TCONS_00065962-exon-scaffold_448-1491911889:457717..457875Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:456828..457007TCONS_00065962-exon-scaffold_448-1491911889:456828..457007Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:456068..456234TCONS_00065962-exon-scaffold_448-1491911889:456068..456234Clytia hemisphaericaexon
TCONS_00065962-exon-scaffold_448-1491911889:454513..455665TCONS_00065962-exon-scaffold_448-1491911889:454513..455665Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:454513..467086 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.176012	0	0	0	0	0	0	0	0	0	0	1.29312e-08	0	0	0	0	0	0	0	0	0	0	2.4758e-09	0	0	0	0
Blast
[Close]
BLAST of TCONS_00065962 vs. Swiss-Prot (Human)
Match: MYH10 (Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 1.034e-21
Identity = 143/499 (28.66%), Postives = 247/499 (49.50%), Query Frame = 1 
Query:  238 NRLQKQKKRMQNELDQINAIFDTEKSEIADLQAKLKRANKIVAEERRIREQLQEAKSDLIIEKTNLENKMETLEDDKRALDRQVTDGEIARKALRLECENLGDARDNAKSMINNLEKDKRHADILLEEARKTNASFESQLGEVEQNYMTLQGQNQANKEQYARDISRKDDKVEELKRAVDKAERDLKVTLEEEKKKREQMMASRKGLESQITGLQIELDEANRRNDDQQKVIRKYQTQLAQLKDLQMELGEMNXXXXXXXXXXXXXXXXARSAQSEKDSVIANLQQSEX--RSAQSEKNSVIANLQQSERAKRXXXXXXXXXXXXXXXXKSLLRQQALDEKRILDDKYNELKMDYDDEKQRADEMDVKARKYQKXXXXXXXXXXXXKDERXXXXXXXXXXXXXXXXXXXXYSKL---DSTLKNKIRETTDVLERRMHQMEVDLEGEVKEREALNKTLRRTEKSLTETTALMTEAQEAEEVYKSQADKLTKKNEQLRREL 1719
            ++L+K K R+Q ELD +    D ++   ++L+ K K+ ++++AEE+ I  +  E +     E    E K  +L            + E   K LR + E+L  ++D+    ++ LEK KR  +  +EE R      E +L   E   + L+   QA K Q+ RD+  +D++ EE KR + K  R+L+  LE+E+K+R   +AS+K +E  +  L+ +++ AN+  D+  K +RK Q   AQ+KD Q EL E                     A++ +D + A  ++SE   +S ++E   +   L  SERA+R AE E  E+  E+    S  +   LDEKR L+ +   +    ++ ++    M++   +++K      +  A    ER   +          ++ +E  +KL   +  +K+K + T   LE ++ Q+E  LE E KER A NK +RRTEK L E    + + +   + YK Q +K   + +QL+R+L
Sbjct: 1416 DKLEKTKNRLQQELDDLTVDLDHQRQVASNLEKKQKKFDQLLAEEKSISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQ---AQMKDYQRELEE---------------------ARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEITNSAS-GKSALLDEKRRLEAR---IAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAANKLVRRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQLKRQL 1886
The following BLAST results are available for this feature:
BLAST of TCONS_00065962 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYH101.034e-2128.66Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3[more]
back to top