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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065944 ID=TCONS_00065944|Name=TCONS_00065944|organism=Clytia hemisphaerica|type=transcript|length=525bp
TGAATATGCATTCTTGTTGACTCAAAAAGCAAATTTAAGATTTATGAAGA
ATATTAGAGAAAATCACGTGACGAATATTGACTTCATGGCGACATCGCAT
CAAACATATCACCATGGCGACCAGCAAACCGTGACGTTGTTAGGTTTGAT
GTGTCGTATCTATACATCAACCATCTTACAGTTACACAATGTCATATCAA
CAAACACACCAACATTGAGTGAAGTAATCAAAATGAAGATACCAAGAGAG
ACTGGAGGTCACCTTCGACACTCCGAGAACATTCACGTCAAGTTTCCACC
AAACGCAGTCAACACTAACCATCTTAACGCTTCGCTATCCGTTATCAAAG
ATGAATCTTTGTACCATTACGATACCGGCTCCAATAAGACGAAACTAGCG
ACGCCAATAATATGTTTGGGTCCATGTGGAACAGTTTTCAACAGACACGT
CAAAGTGACTCTACCCTTAATAGAAgATTGAAATCCGAATTATTCACTGC
TGATCAACAACTTGGCGAAGAAAAC Run BLAST on NCBI transcript from alignment at scaffold_448:179962..181886- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065944 ID=TCONS_00065944|Name=TCONS_00065944|organism=Clytia hemisphaerica|type=transcript|length=1925bp|location=Sequence derived from alignment at scaffold_448:179962..181886- (Clytia hemisphaerica)
TGAATATGCATTCTTGTTGACTCAAAAAGCAAATTTAAGATTTATGAAGA
ATATTAGAGAAAATCACGTGACGAATATTGACTTCATGGCGACATCGCAT
CAAACATATCACCATGGCGACCAGCAAACCGTGACGTTGTTAGGTTTGAT
GTGTCGTATCTATACATCAACCATCTTACAGTTACACAATGTCATATCAA
CAAACACACCAACATTGAGTGAAGTAATCAAAATGAAGATACCAAGAGAG
ACTGGAGGTAGGTCGACTTTATACATACTCAATAGATTTGAAAATAAAAC
TTCATAGTCAGGAAACAGCCGAACATTTTTTGAAGGTAAATGGAAACCCC
TGAAAATATGATAATGTCTATTACCATATACACTCTAAATACACCCTAAA
ACAGTCCACCGACACGGTTTTTACGAGTCCTTTGGCACAAGTCACATTAA
AACAGACTGTTAGGTTTTTTTGAGACAGGAGTGCGATTGGATATTTTCTA
TAGGTCACCTTCGACACTCCGAGAACATTCACGTCAAGTTTCCACCAAAC
GCAGTCAACACTAACCATCTTAACGCTTCGCTATCCGTTATCAAAGATGA
ATCTTTGTACCATTACGATACCGGCTCCAATAAGACGAAACTAGCGACGC
CAATAATATGTTTGGGTCCATGTGGAACAGTTTTCAACAGACACGTCAAA
GTGACTCTACCCTTAATAGAAGGTTTGACATTTTTTTCACTCTGTTTGGA
TTGGAACCAAGTAGTCCATCCACCTTAGAACAATAATTTTTTTAACCGTA
TTTTAGATTTCCTTCGTTGTCAGGCGTTGTCTTTCCTGATTTGATTATTT
GAGATTAGACTAGTAAACTTTTGTGCTCACTATGTTTGCTGAATATAACG
ACTAGATCTAAAAGGTCATGTTTATATTTCGGCTTTCCATACCACTGTCC
TGCGGTAATTTATCTTTCTTATAAGATCTCGTTGGAAACACTATTCTCGT
GTTTCTGTGTTCAAGGAAAGGCAGACGCTCTCTAGTCTTGCTAAAAATAA
ACCTGGTATTGCATCAGTAAAGCCATTTGAACTCTAATCCATTATTTCTT
CATGCTAGTACGCCAACAATATAACATGTTGTTGTGGAAGTGGTTTGTAA
AATTATGCTTTAGCTGTTTCTTATTTCGATTTTCATAGACAGACGTAAAC
TGTATATTGTTATAGCCGAGAGTGTTATAAAGTATCTTGGTCTTTTAGAA
TTGCCTTCGAAATCGAAACAATGCAAACTTCTCATAATGGTCAGCCAAAC
TCTTCCCGGTGACCCACCTCGATGGTCAAGGCTCTATTCATACTATGAAA
TCAAACAAGCACACAACGGTACTCGTTGCATTACGTTCGAAGTTCCTCAC
TTCAGTGTATACAAGGTCTTATGGAGTTATGTTGACAGCACCTTACCAGA
GACTATCAAGCTGCATGCTTCAAGCACGCTAAGCGGTTTTAGTTTCAAGA
CGAACTTCGAGGCACGTATGACGGATTGTAACCATAGCAATCAGTTTGCC
TTGTGTATTATTGGATGCCGTGAAAGTGGCGATTCTGAAATGAAACAACA
GTATCCACTACAAGTTGGTTCTTGTAAAGCAAAGAAAATACAGACCGGAA
AGTTGAGGATTAGGTAAGAATTTTATCAATTTTTCAAAATTAGACGGAAT
CTAGAAATCTTGTCAGCCGAGTTGCTACAATGTTTGATTGTTAATGTAAA
ATCCAAGAAAGAACGGAGAAAAAAAAGTTTATTGACGTTGCATTATCGCA
GGGTCACTTTTGCCTGAATTTGATTGTTTCATTTCAAAATGAAGTTTCAA
ATTTCATCACATATATAACACTGCAGATTGAAATCCGAATTATTCACTGC
TGATCAACAACTTGGCGAAGAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065944-exon-scaffold_448-1575043694:181630..181886 | TCONS_00065944-exon-scaffold_448-1575043694:181630..181886 | Clytia hemisphaerica | exon |
| TCONS_00065944-exon-scaffold_448-1575043694:181165..181383 | TCONS_00065944-exon-scaffold_448-1575043694:181165..181383 | Clytia hemisphaerica | exon |
| TCONS_00065944-exon-scaffold_448-1575043694:179962..180010 | TCONS_00065944-exon-scaffold_448-1575043694:179962..180010 | Clytia hemisphaerica | exon |
| TCONS_00065944-exon-scaffold_448-1510915933:181630..181886 | TCONS_00065944-exon-scaffold_448-1510915933:181630..181886 | Clytia hemisphaerica | exon |
| TCONS_00065944-exon-scaffold_448-1510915933:181165..181383 | TCONS_00065944-exon-scaffold_448-1510915933:181165..181383 | Clytia hemisphaerica | exon |
| TCONS_00065944-exon-scaffold_448-1510915933:179962..180010 | TCONS_00065944-exon-scaffold_448-1510915933:179962..180010 | Clytia hemisphaerica | exon |
| TCONS_00065944-exon-scaffold_448-1491911889:181630..181886 | TCONS_00065944-exon-scaffold_448-1491911889:181630..181886 | Clytia hemisphaerica | exon |
| TCONS_00065944-exon-scaffold_448-1491911889:181165..181383 | TCONS_00065944-exon-scaffold_448-1491911889:181165..181383 | Clytia hemisphaerica | exon |
| TCONS_00065944-exon-scaffold_448-1491911889:179962..180010 | TCONS_00065944-exon-scaffold_448-1491911889:179962..180010 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:179962..181886 - |
Blast
The following BLAST results are available for this feature:
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