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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065942 ID=TCONS_00065942|Name=TCONS_00065942|organism=Clytia hemisphaerica|type=transcript|length=871bp
TGGCGATCAGTCTTGGTTATTTACCAAACGAAGCGCAAACGAAATTCCAA
CACTCCACGGACCCTGTTGTTGACCTCTTTTTGGACTACACCTCAAATCG
TCATGGAAACCGTATTGAGTTCTTTGATTCTATGGCAACTGTTGCTGGCT
TCTTTAAACTTCAAAATGGTAGCGAAGTAATGGAGAGCCAGCATTTAAAT
ACCGGTATTCAAAAACAGACTAAACGAACTTTCGACCAAGCATTTTTAAA
AGACACACGTCCTATAGAAGAAAATGAACTAGACGATATTGCAGAACAGA
TATCTCGATCATGGCGTCACGTCGGTCGAAAACTAAACATTACGGAATCA
TCATTAAATGAGATAGACTTACGGACAGGACAGAATACGGAACGAGAGAA
AGCCTTTCAAATGCTTTTAGAATGGCGTGAAAGGTTTCCGGATGATTTTA
ACAGGGGTAGGTTGTTTACCGTTTTAGATTTATGTAATTTGAAATATACT
GCTAAGCGTTTTTTGAGGTGACTGGTGCATCttgtaccttatcggccaaa
acttgtcggccctaagtgactaaattttggcctggtgactaaaattaggg
ccgactgaaaatttgggccgactaaaatttcagaaataGCCAAAACTTGA
TTATAAGTCGgaccttagtgactaaattttgacgagatgactaaaattag
ggccgaatAATAATTAAGGTTGACTAAAATTaagccgactaagttttggc
cgataaggtagtttaAGTTCTCAGTTCGatcaaaattaaaggttttgttt
ttagacaAGAGTCATTTGCTTGCTTGCTTCATCATTTTAATTTACCTACA
GAGAAATGTCTCTTATGCTAA Run BLAST on NCBI transcript from alignment at scaffold_448:177389..178499- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065942 ID=TCONS_00065942|Name=TCONS_00065942|organism=Clytia hemisphaerica|type=transcript|length=1111bp|location=Sequence derived from alignment at scaffold_448:177389..178499- (Clytia hemisphaerica)
TGGCGATCAGTCTTGGTTATTTACCAAACGAAGCGCAAACGAAATTCCAA
CACTCCACGGACCCTGTTGTTGACCTCTTTTTGGACTACACCTCAAATCG
TCATGGAAACCGTATTGAGTTCTTTGATTCTATGGCAACTGTTGCTGGCT
TCTTTAAACTTCAAAATGGTAGCGAAGTAATGGAGAGCCAGCATTTAAAT
ACCGGTATGAAATGAGGGAGAGGTTGTTCCGGTGTATTCTTTTGTCTTAT
CAACTGACTGCTTTTAAATTTTTATATTTAAGTTTCCTCCATCAAAATAT
ACTTTTATGGTATTCACGACGTAATGTATTATACGGAAGCCCGGTCGTTT
TTAAGTGCTTCCGTATCAAACATTACGTCACAAATTAGTAAGTCATGTGA
TTAAAATCGCGAGAGGTTGCGTTCTATCCATTGTTACTTTTTAGGTATTC
AAAAACAGACTAAACGAACTTTCGACCAAGCATTTTTAAAAGACACACGT
CCTATAGAAGAAAATGAACTAGACGATATTGCAGAACAGATATCTCGATC
ATGGCGTCACGTCGGTCGAAAACTAAACATTACGGAATCATCATTAAATG
AGATAGACTTACGGACAGGACAGAATACGGAACGAGAGAAAGCCTTTCAA
ATGCTTTTAGAATGGCGTGAAAGGTTTCCGGATGATTTTAACAGGGGTAG
GTTGTTTACCGTTTTAGATTTATGTAATTTGAAATATACTGCTAAGCGTT
TTTTGAGGTGACTGGTGCATCTTGTACCTTATCGGCCAAAACTTGTCGGC
CCTAAGTGACTAAATTTTGGCCTGGTGACTAAAATTAGGGCCGACTGAAA
ATTTGGGCCGACTAAAATTTCAGAAATAGCCAAAACTTGATTATAAGTCG
GACCTTAGTGACTAAATTTTGACGAGATGACTAAAATTAGGGCCGAATAA
TAATTAAGGTTGACTAAAATTAAGCCGACTAAGTTTTGGCCGATAAGGTA
GTTTAAGTTCTCAGTTCGATCAAAATTAAAGGTTTTGTTTTTAGACAAGA
GTCATTTGCTTGCTTGCTTCATCATTTTAATTTACCTACAGAGAAATGTC
TCTTATGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065942-exon-scaffold_448-1575043694:178296..178499 | TCONS_00065942-exon-scaffold_448-1575043694:178296..178499 | Clytia hemisphaerica | exon |
| TCONS_00065942-exon-scaffold_448-1575043694:177389..178055 | TCONS_00065942-exon-scaffold_448-1575043694:177389..178055 | Clytia hemisphaerica | exon |
| TCONS_00065942-exon-scaffold_448-1510915933:178296..178499 | TCONS_00065942-exon-scaffold_448-1510915933:178296..178499 | Clytia hemisphaerica | exon |
| TCONS_00065942-exon-scaffold_448-1510915933:177389..178055 | TCONS_00065942-exon-scaffold_448-1510915933:177389..178055 | Clytia hemisphaerica | exon |
| TCONS_00065942-exon-scaffold_448-1491911889:178296..178499 | TCONS_00065942-exon-scaffold_448-1491911889:178296..178499 | Clytia hemisphaerica | exon |
| TCONS_00065942-exon-scaffold_448-1491911889:177389..178055 | TCONS_00065942-exon-scaffold_448-1491911889:177389..178055 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_448 | supercontig | scaffold_448:177389..178499 - |
Blast
The following BLAST results are available for this feature:
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