TCONS_00065914 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065914
Unique NameTCONS_00065914
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length967

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065914 ID=TCONS_00065914|Name=TCONS_00065914|organism=Clytia hemisphaerica|type=transcript|length=967bp
gaacggaacggaacggacGGAAGACACTACAAACAGCTCTTGACGTCCTC
GAATCAcactttgtcaatttttagaACGTTCCCCCTCTTTTCAGCATTGA
ATTCTGAAAGATTCAGATCTCTATATACAAGGATCAACGTGCAATGAGAT
GAGAATAAAAATTTCGGACATTTTCAAAGATGTCAGAGCAACCTAACAGA
AGAATGGGCAAGGGAGAGAAGAAACGCCCACTAAAAATTGTCATGCCTCC
TGTTCACCAAACGCAACCTCAACCAGTaaatgctccaAGGAATTTATCAG
ATAGAACCACATTAACTGTGAACAGCCAGGATTACCCGTGCAGTACTGAT
GATTTGATAGAAATATGCGAGCTTGGTCGTGGGGCCTATGGGGTTGTAGA
AAAAATGAGACATAAACAAACTAACATAGAAATGGCTGTGAAGCGTATTA
GGCACACGGTCAACACGACAGAGCAAGGTCGTCTATTAATGGATTTAGAT
GTTTCAATGAGACTTAGTAATTACCCCTATGCCATCCAGTTTTATGGTGC
ACTCTTCAAAGAGgGAGATGTTTGGATATGCATGGAACTCATGAAAACAT
CATTCgataaattttataaaaaagttgcAGAGCAAGAAGGGGCTTTGATA
CCTGAAAAAGTACTGGGAAAAATATCCTTCGCTGTTGTTTCTGCATTGGA
ATATTTACATAGTAAAATGAAAGTAATCCACAGAGATGTCAAACCGTCCA
ATATATTAGTTAATGATAACGGAGAGATCAAATTATGTGACTTTGGAATC
AGCGGACAACTGGTTGACTCTCTGGCAAAAACCCTTACAGCTGGCTGTAA
GCCCTATATGGCTCCTGAACGTATCAACCCAACGAAGGGACAACATGGTT
ATGATATACGTTCTGATGTGTGGAGCTTAGGAATCACCATGGTCGAACTG
GCATGTTTGAAATTCCC
Run BLAST on NCBI

transcript from alignment at scaffold_448:528670..541591+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065914 ID=TCONS_00065914|Name=TCONS_00065914|organism=Clytia hemisphaerica|type=transcript|length=12922bp|location=Sequence derived from alignment at scaffold_448:528670..541591+ (Clytia hemisphaerica)
gaacggaacggaacggacGGAAGACACTACAAACAGCTCTTGACGTCCTC
GAATCAcactttgtcaatttttagaACGTTCCCCCTCTTTTCAGCATTGA
ATTCTGAAAGATTCAGATCTCTATATACAAGGATCAACGTGCAATGAGAT
GAGAATAAAAATTTCGGACATTTTCAAAGATGTCAGGTATGTGTTTTTTC
AGGGCCATTTTGCGTTGTTCGTAAATTTCTTTTTGGTTGCCGACACTTTT
CCCTTTGCTCACAGTTTTGTTCTATGAAGCTCACAGTCTTAaaatgaata
gaccttttttcaaagaggccaccctgttgaataattatgtagtccagcag
aaaaacaatgataaaaccatgcataattatcacaatatgcatgatacagt
aattatgcatggctctatcattgtttttatggctggactacataaccaga
cgatgtcaatcgaacggaatcgaacaaaaattccaatcgaatcaatcgaa
cgcaatcgaatgattgcgattcgattgccaaacgcaatcgaatatcaatc
gaacgtaaaattctgggtaaaattcgattgattcgattgatattcgatta
cgttcgattgatgttcgattacgttcgattgatgttcgattacgttcgac
tgcGTTCGACGGGTGGTCAATTAAATTAGATTCCAATTtacctcaattcc
tttcaaGGTGATATGGAAATCGCGAACCGGCCAAACAGCCATCGTACTCG
TAGATTTTGCGGGCAACGTGACATACAGCCGTCTTTTCTTCGATTCATAT
CATCTCGTTTAACGCTTCAAATGTTGAACAAGAATCAACgttaatcaaca
gaatcaattagtcgaaccagtcgaatgcaTAAGCCAATCGAACGtagtcg
aatcaatcgaatacattagtcaatcgaacgcaatcgaatcaatcgaacac
agtcgaatcaatcgaatcaatcgaatccaggcactaatcgaacgcaatca
aatcaatcgaacacagtcgaatcaatcgaatacattagtcaatcgaacgc
aatcgaatcaatcgaacacagtcgaatcaatcgaatcaatcgaatccagg
cactaatcgaacgcaatcaaatcaatcgagaaaatcgcggtaatattcga
ttgacattcgattgcgttcaattgattcggcgttcgatttgttcgattga
catcgtctggacataattattcaacagggtggcctctttgaaaaatatta
ttcctttctctaaaaaagaagggtgtcggaattagacgaggcgAGGGATG
TCCAAACGATcccaatcgaacggaatcgacgatcaaaccagtcgaaccaa
atcaaacgcaatcgaccgggttatttttttcttgtattttttgaaattgt
ctggTACTGTTGGATtctagaggaggggtgtcgatattagaccaagttGC
GGTACGCACCACCACTAAGGGGGaagggggtcttctcaaaagcgtatgct
tgctaACAGggcacaagtgttacgcgtaagccaaatcgcgtattatgaac
aacctctaaattgctgattacaggagaaaaaaaatcgaaattcaaaatgg
cagcCAAGCCCAcactgataactatcaaaaatctttgtttttcaatcagc
taccgtgagattgggtaacttgcatcagtggaggcaaacatgcataaacc
tcaaatgaaagacctgtattaagttgaagttggtttgatattctacgttt
gacgtttgatattcgtttgatattctcaaatttgcgttttgaagtttttg
tgactacttttggaactggaaactattggaagccaatagactTTATTCTC
AAGtgtgtctgtgcaaaatttcagcgctctccgtcgcagtgtgctccctc
taaaaatttgtaaccgtcaaacctcatttcggccgaaatgacaagttggg
ctcctgtgggggagagcggttatctttggaattggaaactattggaagcc
aatagagtttattctcaagggtgtctgtgcaaaatttcagcgctcttcga
cgcagtgtgctccctctaaaaatttgtaaccgtcaaacctcatttcggcc
gaaatgacaagttgggctcctttGGGGGAGAGTGGTTATcattggaattg
gaaactattggaagccaatagagtttattctcaagggtgtgtgtgcaaaa
tttcagcgctctccgtcgcagcgtgctccctctaaaaatttgtaaccgtt
aaacctcatttcggccaaaatgacaagttgggctcctgtgggggagagtg
gttatctttggaactggaaactattggccatttttagagggagcacgctg
cgacgaagagcgctgaaattttgcttccaatagtttccagttccaaagat
aaccactctcccccacaggagcccaacttgtcattttggccgaaatgagg
tttaacggttaccaatttttagagggagcacgctgcgacgaaGAGCGCTG
ATATtttgcacagacacccttgagaataaagtctattggcttccaatagt
ttccagttccaaagataaccactctcccccacaggagcccaacttgtcat
tttggccgaaatgaggtttaacggttaccaatttttagagggagcacgct
gcgacggagagcgctgaaattttgcacagacacccttgagaataaactct
attggcttccaatagtttccagttccaaagataaccgctctcccccacag
gagcccaacttgacatttcggccgaaatgaggtttaacggttacaaattt
ttagagggagcacgctgcgtcgaagagcgctgaaattttgcacacacacc
cttgagaataaactctattggcttccaatagtttccagttccaaagataa
ccactctcccccacaggagcccaacttNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNcgctgcgacggagagcgctgaaattttgcacacacacccttg
agaataaactctattggcttccaatagtttccagttccaaaagtagtcac
aaaaacttgaaaacgcaaatttgagaatatcaaacgaatatcaaacgaat
atcaaacgtcaaacgtagaatatcaaaccaacttcaacttaatatgacct
gtctggtcatttaAATACAACTACACAGCTccactcgcagctctactcta
ccatttttgttttgattaaattttgtattttaatgactagccaggtcttt
catttgagggctatgcatgttagcctccactgatgcaagttacccaatct
cacggtattacagctcaataaatcaatgaaataatttgaaataaaaagta
ttaCAAAcgttgaacctttcatgaatccaaataaataaaagtatttatct
aaagtgaagattgcatttcaaaataaaacgatatCCAAACCAACTTAAAG
ACAGTGTCtgcctagcctggatatccaggctgtaaactatttcacagtct
agtctttgatattttatgttctggtttacagcctggtctccctagagcga
tttgcattctccatatgagaatgcagtctGCTTGCTTGTGCTCATTTCGC
TGAAGCCGTAAGGACCAATCTACACGGTGcggagcaattctgaagcaaaa
ataggatagtcctccacttgctagtgaagagagcgctttctgttacatga
aaacatgaaaaagaagaaaacagaggcaagttcattttccaagaaaacat
ggtctgatgtttggtcatgataatgcatgcaaacttgttcatgggctccg
gtgtaatctttggatgttttaaatggttttagataTTGTAAGGCTGCTTT
TATTAAGTTCTGTTTTgatgccctgggttggctaggaaagttttggaaac
atgggtttgcactttcattctctagggagaccaagctttataattttaga
actttgtatgttgaggtaaattttgttttttctaaaattttgagcttgga
tatccaggctagtgtctgccaactaaaaatttctctgcggggtcactgca
ctggcaaggagttacgacttcagactttagattccaattcttgtgtaggc
tgcaactacactgccaaatgatctgtattacaaatacttccaaataggtc
cataagttaagaaaatgaaattatcatctagcacgggggttttgttttta
aaaacaaacttcaaaataaaattgttaatgaacttgttacttaaaatatc
acNNNNNNNNNNNNNNNNNNNNNNNatcacttacttacataatttattta
tgatataacacccctttcttaaataaatggcttcttaaagtcttttatgt
ttgccgcaagaagggagaaaaatttaatttaatttgatAAAGCGCTCcca
cagcattaatctttgatacgcaatGCAGCAGGGTGCAAGTGTGACTAATT
TTTAGATTAGGCTAGAGTTATCTCCTTTCTCTGTCCTAtttcaacaatac
aatgctTACATAGTTGACACATAATACACATTGACAGAAGTATTCTCCAT
GCAATGTTTAGGCTGACCctcaaaatatttccttttccGGTCCACCAGGT
GACAACAAAAAAACACGTGGTTGGCCGCAAAAAAGATTATCTTGCTAAAT
TTTGATCTCAAAACTCAAATTTTGGAAGTACTCAAGGAAGCACTCGGGGG
GGGGGACTCAGAGTTTCttaaagttacaaagaaagcgagttgataaaatg
AGGTTTAGAGACGTTTATTAAAGTGACGAAAAAAGCGAGTGAATAAACTG
AGGTTTAAAGACGTTTGTTGGGCGTTAGTAGTCTTCAAGAGGCAGGGGTG
TTAAAGTCTTGTCCCCCACGCAAGGGAAAGCACGAGTTCttccaaaatta
attctttgGTAATCAAACGCTAGAGAAGAAAACTAACTGTAGTCATTTTT
CTATGACGTAAACAAAGATCTCTACTAAATTCAACACGaaccaaacaata
aaaaaaatccaatgtCTAAACAAAAGTTCAATGTGACAAAGCTCATCGAG
ACCACTTTATTTGTTTCGATTATTAATTCTAAGGATTGaattttttctaa
tctttaGTTATCAAACAAAAGCGGGAATCTGATGTGagcgttattttttc
aaagaatccttTACCTCCATTTGATTGGATACTTCTTTTTAAACAATCGC
ACAGCAATTTTTtgattggaaaaaaatgaaacaattgaTATCGCAGTGAT
TGTATGGTAAAATATTTGGCCCTTTCACGAGTGTTTGCAATTTAACAAGA
TAAATCAATGTGACTGAACGTCTGTAAACCTGATAAAGACCTCCACTAAG
AAGTTCGAAATATTGTTTGAAATAAGATTTATATGAAGAATGACTATTTG
AACTTACATAAATGAAGAACAATGTAAATATGGGTGATTTCTTAGTTTTT
CTTCTATGTCTTCATGTACACCAATCCGGGGAGTCTCCATATATATACCA
TAGGAAAGTTCATGAAACCTGCTAACTTTATTTTGAGTTTAGCAAATCCC
CAAGATTGGCAAACAATCATTTTCGGCTTTTCACTTTGATCCTTTATCTG
TTTCTTTTTGGGTCATGTTTGGGGCATAATAGCAAAACATTGGTGTTCGG
GCTAAGTTAAGGCAACAAAACTTTAGATTTTGCCTCTGAAAACCTGGCCT
GAACATGCGCAGGGCAAGTTTGGGTCATGTTAGGGCCAAGTTGGCACCTC
TACTTTCATAAGCTAAATCTTGGTACCATTTTCAATTTCCCAACTTTCTC
TTGGAAAAAATCACAATATGTGACTCCAAAGGCAGTTTTAAGTaattaga
aaatagaaaattctataataaaatcagcatttttaagtaaaaactcttaa
ccctattcaaactaggcttttaggggcggttcagaactagggggggcttt
tcctgtaccaccccttaacttttgatctagtgggtctttttggatgaaat
ttggcacacaagatccttgtgacgtaaggtaacttttgacaaaaaaaatt
ttttgatgacgtcactcatcatgcccaaagtgagcaaaaaccgaaaattt
cctttgttcttataaatagctattgtattctaacaaaggctttagaaaaa
agttgcctgagtttaaaatgcttattttatcctaaatattcaaaaaatta
cggtctaaacgatatatttgacaatgaaaataaatttgtattgtaaaagt
gtcaatttttgtgacaccttactgtcagaaatgtcatcatgctcaaggtg
tgaaaatatttaggtgacaaatttttttttattttgaagctaaataaaag
ttaagaatttacagaaaatttcacggcaaaagctctattatttcaggagc
tattagaaatagtttgacctccgaacagaaagagccccccccccctagta
cgaatagggttaatatCCCAAGTAATTTTTGATTTACAAGTGCCAGAAAT
CTTCCCACCTGTCAAATAAAATCCCCTCCTAATTTTACAGATTCtaccat
ctgccaaattaataCCCgccaaaaattgcattttggccaaccgccaaatt
aagtacACATCGAAGTTGATACACTTCGGCAACAAATACCTGGTTTTCTG
AAAGTCCCATGctatatttatttattcatgctttctttatttctttctgt
ttctatttcaaaaattgtctaGTCAGAACAGTCTATAAGATTCTGAGTGT
TTTTCTTGGAACGTTTTAAAGAGGTTCAATGTTTCTGGTTGAAATCTGAA
GATCATCTCGACTCTCAAAAACAATATCAAATCTGATCAGATATCAACTG
TTAGATTATTAGATATTAACTGTCAATAAATCTTTAAAGGAAAACAGACT
AAAAGCGGCCTGCAAAAAACAGGAACCTTTAGCTTTGCCAACTTTAAAGG
CCCTAAGGCAATAAACAACTTACTGAAGTGGATTCTTATCAGGTTTTAAT
ATTGCCCAACAGCAGTTGGTTTTAATATTGCCCAAATCCATCACCCACCC
CCACCTCTAAGAGGTAACGAAATATTTGGGCTGGAAGTTGCTAAGAATTT
TAGCTGTTTCAATCATGTCAGGAATCTGGGCTGTGTGAAGGTTATTTTTG
AAGGGTTGTTTTAGAATTCCTTTTAATTGTCAGGTTACTAGATAAACAGT
GTTCTACTTGAAATAATATAGAAAATATGGTGTTATTTTATGAAAGGGAA
TTTGAGAAAGGGGAATTCCCCTTCTACAtgattttccaggaaaaattcaa
tttgGTCACATGAATTTCACTGTCAACAAATTTTTTGATATcttcatatt
tttaaacaatattcAATACAGATGCAAACCTTTTGAGATGATTTGATGAC
AACTTGTTTTCACCTTTTCTATTTCTTCAGTGTTCAATCAATATATATCT
TGTTTTTATATACAGAGCAACCTAACAGAAGAATGGGCAAGGGAGAGAAG
AAACGCCCACTAAAAATTGTCATGCCTCCTGTTCACCAAACGCAACCTCA
ACCAGTGTAAGacaatttcaccattttattttatcattctCTAATTTAGC
TCAATGGAGCATTTTTTTGCATATCGATTCTGCTTCATCATTAACATTTT
GTTTAACAAGCAACTATATTTTGCAATTAatgtatttttgtgaaaaaaaa
gctaaaaaacttGTTTAGTAGGAACATCTCTAttgtttttagaaatgctc
caAGGAATTTATCAGATAGAACCACATTAACTGTGAACAGCCAGGTAAGT
AGTACGGCTTAATGAATAATATTTGACTCATTGACACAATGTGTGACCAA
TCAAGTTTAAAGACAGTAATGGGATACTTACTTGAAATCCCGCAGACTTT
CATAGTGGTATAAGGGTatcaaccattgagtttaaaggcaaatgggctag
agaggaatcttcagcCTTTCTCCCCTTAAtttttgttctgtttttatgGG
ATGCCTGATGAGACTTTGCCCTTTTTTGTTCTTGCATAATCCATTTTTCG
AAACCAGCTAAGAGTTTCTCTAACCccgcttcaaactcaatggtatcaac
caggccatattttagaaaggcaaggcagcgtccgttggtggccaaaaagg
gcactttttcttatgtttttccactaaaaaggctgtttttaccaatattt
tagtaatttcaagagGGGCAGTGTCCGATAACCGGACgcttaaagggcat
gaaaaatggcctgtcAACCCCCTCACAGATATGACATCTCCTAGATTTTT
TACTCCACTCCTTCCCCTATAGGAATGTGTTAGTGCTTTGATAGTTTGAT
GTTGTACCTATCATAAAATGTCTATTGAATTTTCGCTCTTTTTCTTTCAG
GATTACCCGTGCAGTACTGATGATTTGATAGAAATATGCGAGCTTGGTCG
TGGGGCCTATGGGGTTGTAGAAAAAATGAGACATAAACAAACTAACATAG
AAATGGCTGTGAAGGTTTGTTCATTCTCAAAATCCCAGATCTTGATTGAA
AATCTTCATCTCTCTTCTTGTTTTTTTAGATTGAACTAATTTTTGACTTT
ACTAAAAAGCATTGTTGCTACCTTTCAATTTACTTTAGCCCATTAGACCT
TCATATGCAATGTCTAACTAAGTACTTCAtgaaaatttacaataaaagtG
ACAAGTTATAGATTTAACTTTTACTTACACACATATTTTTAGGACTTCAA
TTCAAATTCTAGACTGTTATATTTGGTAACTTTGCTTATTTTATAGCGTA
TTAGGCACACGGTCAACACGACAGAGCAAGGTCGTCTATTAATGGATTTA
GATGTTTCAATGAGACTTAGTAATTACCCCTATGCCATCCAGTTTTATGG
TGCACTCTTCAAAGAGGTAAGTCTGATCTATTTTTTCAGGATATTCCTAA
ACAGAATAAATTTTCAcggttaattttttttgatggacAGCATAGCTATT
ATATATCTTTAGGTTAAATATGTACGAACAAGGTGCTCATgttaatcttt
tgttttttttctaggGAGATGTTTGGATATGCATGGAACTCATGAAAACA
TCATTCgataaattttataaaaaagttgcAGAGCAAGAAGGGGCTTTGAT
ACCTGAAAAAGTACTGGGAAAAATATCCTTCGCTGTAAGtgttctttgtt
tttttgattCGTGTTTTTAAAATTCCAGTCCTTCTTTCATAGCAGATCCA
TCCTGCGCAAACCACGCTCTGCTGTAAAGTGATGGCGTGAATGTGacgat
ctgacctggttgttcagcTAAAACAATCAAAACCGCACCACCTCttgcga
aagtgaaagtgcatGGCCATTCAAATTTGTTCAAGTCAAATGCAAGGAAC
ATGCATATCCCTTCAAATTACACAAATAAATAAAGTCACAGTCAATTTAA
GGTCGATTCTTGACTATTTTTAATACAGGTGTTTCTTAAAAACGAAATTC
TTATATgaatactttttgctttttcagGTTGTTTCTGCATTGGAATATTT
ACATAGTAAAATGAAAGTAATCCACAGAGGTGAGATAATTATTCGGTTAT
AAGTTGTTCCCAAAGACAATGAAAATTTGGGTAAAGTTCTTCGAAAAATT
CTCAATCCCTTATAATTAATTACGAATTCATCAGAGTAAGCATTCACCCA
CGACTTATAACTTGTTATCGAAGCTTATAAATATAGCTGAATCTATAGAT
TTTATCATTCCCTGAGGATGGAANAAAGCTTAGAAATATACCTGAATCTA
TAGATTTCATCATTCCCTGAGGATGGAAATcttgaatgttttttatttac
gaTGAAATCTTTCTTAGATGTCAAACCGTCCAATATATTAGTTAATGATA
ACGGAGAGATCAAATTATGTGACTTTGGAATCAGCGGACAACTGGTTGAC
TCTCTGGCAAAAACCCTTACAGCTGGCTGTAAGCCCTATATGGCTGTATG
TTATAAAATACTTATACTTTACTGATAACTCCTGTTATTCTACTGTCTCT
CTCTTTTCATCTAACACAAGTTCTATACGTTCTTAAATGACCTTCTGATT
GCTGTTAAGCTTTCTCATTCCCAGGGGAAACATTTCAGGTGCATTTCCAG
GATCTTTCTAATGTTTTTCCTGGGTATACtggaaaaataattcttttgcT
GCTTGCAAATACGTAACAAACAATGGCCTTGTGACTGACCACCTAATAAG
TTGAAGCTACTTTCCTACCTACCCAGAGCGTTGGTTTTTTACGTTGTTAA
AGTGGCGATAGGAAAGCTTTGCCGTGAATGAGAAAGATTAAGCCATTCTA
TGTTATATTTGACGGTTGAGTCTGTCAGGTTCACGAACTAAATAAATCAA
ATccgataaaaaaaaattcttctttggAAGTGTTTACACCGCAACATTAC
CCTAACTTTCGAAAGTCTGTTCCGACTTAGAAATCAACTTCCAAAGCAAA
ACCAATAAGTAGTGAACAAGAATTTCGTCACCGGTAAAGTAGCAAACTTC
CCTTAGGTAGGGCGATTCTCTGAGGTTTCCACTGCGTTAAGGTAAAATTA
ACTTTAAAAGTATTTAAATCGAGCTACATTTTACATTTCAGCCTGAACGT
ATCAACCCAACGAAGGGACAACATGGTTATGATATACGTTCTGATGTGTG
GAGCTTAGGAATCACCATGGTTCGTTTGAATGATTTTTCCACTCATATTC
TCaatttcagttgagctagaatctgagaatgtatGTCAGTCAGTCTGTAT
GTCAGTCACctcaaaactttagggcaggctggagacttcaaaaatggtcc
gattcggctgaaattttgtacacttgctccttgggtgaatacctgggggt
gtttttttcatttttttttcattttttttccaaattctgATTCtaacaat
ctttttttttttattccattttttttattgttacaattgggcctacgagt
AATTAAGAAGATACCGAAGTTGATctagtgcggttagcacgttcgacagt
tttGTCACTGTTGCTACACGTTTTGGATGAAATTAATACAATGAACTCTa
gctttaactcgaacctctataactggaATGTCTTCTTATTTCGAACAAGT
TTAATGGTCCttttagttaacaatgccttataagccttactccataactc
gatatttccttaactcgaacagatTTATGTTCCCTGCgcgtgttcgaatt
atggaatcTCCACTGTATAAATTTCAGTTTTCTGATTTGTTTACATACAG
GAGTCGTCAATTTTCATCGCTAATTTTTAATACGAaatttactttaatgg
gataaactttcgcggggatgggtctatccgcgaaattcaaaaacttcGCC
GGGACTTGATTTCGCGGATGAGGAGTTCCCTGAGTTTTCGTATAATTTCG
CTGACCaggattaaattaaatttttctaaagtgattgcaaattttgcaaa
atcggGGTAGCAAACAGAACttctctcaaaattttgatattgtagtatgt
gaaaattcgaaaaataatgAAGAGACTTTCTTCCAAGCAGCAGGGTTTGA
GTAGTCTGATTTGCGGGACGAAAAACCGACgatagaaatttgaaattttc
gcgaatcgaagaaagatttcaatcatttcgcgggtacttaatttcgcgga
tgaggcccttccaaattttcattgggacttaatttcgcggatttttgcgg
atgacacccaaatccgccagaaatctgcgaaatttaatccccgcgaaagt
ttatcccattaaaagtAGGTGACATGACTTGTGCCGTACTCCTAGATTTC
AACATTACTAACAGAACTTTTGGACGCGtgtattttaaaaacaatttttc
ttcACCTTTCatttctaaataaataaaataaataaataagtcaGACCTGA
AGTCTGTTTCCGCCATCAAATTTGAAGATTGCAttgtatttttttatcat
tgagTTGATAAGCAGGTCGGAATATTGTTTATTTCAACTCGTATAAGAAT
GACCATGGAAATGTATACTTACTCCATTCACTTTTagtgtattcatgata
tgcaccattgcaatgtcttctgacattacatcatggaccaaatagctgat
tggttgtaagtgacgtaagatcagtcaatacgtcactttcagccaatcag
ctgttgggtatGTGGAAGACATGGTATTCTATTAGTGAGATTTCCACATG
GTAGCAAAAAAGAGTGCACGCTTAAAGCGAATgtatttattgtttatttt
aacTCGCATAAGAATGACCATGGAAATATATACTATAGTCCGTTCGTTTA
AATGCGTACTCTTTGCTACGGTGTAGAAACCATGTCAGCGTGATTCAGAC
TAATTCCCTTGGGACTGGTTTCCACTTGGTagcaaaaaagagtgcacact
tcaAGCGAATGTATTTTAAATTATATTTCAATCCAGGTCGAACTGGCATG
TTTGAAATTCCCCTACAGCAGGTGGACAACACCTTTCGATCAATTAAAAG
CAGTGGTAGAGGAGCCTTCGCCTACGATACCATCCGAACATAATTATTCT
GATGAACTTCATCAATTTATTTCACTTTGGTAAGAACTTTCTCTTTTGCT
TGGCTAGTTAGGTTGTTCCATTTAGTATCCATCCAGGGCAGtgaaaatat
tccaagtcaaaaataattcttgaaaatattgGANTTATCTTTCCAGGTCG
AACTGGCATGTTTGAAATTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041298XLOC_041298Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065914-exon-scaffold_448-1491911889:528670..528855TCONS_00065914-exon-scaffold_448-1491911889:528670..528855Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:528670..528855TCONS_00065914-exon-scaffold_448-1510915933:528670..528855Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:528670..528855TCONS_00065914-exon-scaffold_448-1575043694:528670..528855Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:536285..536375TCONS_00065914-exon-scaffold_448-1491911889:536285..536375Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:536285..536375TCONS_00065914-exon-scaffold_448-1510915933:536285..536375Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:536285..536375TCONS_00065914-exon-scaffold_448-1575043694:536285..536375Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:536562..536613TCONS_00065914-exon-scaffold_448-1491911889:536562..536613Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:536562..536613TCONS_00065914-exon-scaffold_448-1510915933:536562..536613Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:536562..536613TCONS_00065914-exon-scaffold_448-1575043694:536562..536613Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:537220..537333TCONS_00065914-exon-scaffold_448-1491911889:537220..537333Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:537220..537333TCONS_00065914-exon-scaffold_448-1510915933:537220..537333Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:537220..537333TCONS_00065914-exon-scaffold_448-1575043694:537220..537333Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:537616..537735TCONS_00065914-exon-scaffold_448-1491911889:537616..537735Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:537616..537735TCONS_00065914-exon-scaffold_448-1510915933:537616..537735Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:537616..537735TCONS_00065914-exon-scaffold_448-1575043694:537616..537735Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:537884..538003TCONS_00065914-exon-scaffold_448-1491911889:537884..538003Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:537884..538003TCONS_00065914-exon-scaffold_448-1510915933:537884..538003Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:537884..538003TCONS_00065914-exon-scaffold_448-1575043694:537884..538003Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:538347..538398TCONS_00065914-exon-scaffold_448-1491911889:538347..538398Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:538347..538398TCONS_00065914-exon-scaffold_448-1510915933:538347..538398Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:538347..538398TCONS_00065914-exon-scaffold_448-1575043694:538347..538398Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:538687..538814TCONS_00065914-exon-scaffold_448-1491911889:538687..538814Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:538687..538814TCONS_00065914-exon-scaffold_448-1510915933:538687..538814Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:538687..538814TCONS_00065914-exon-scaffold_448-1575043694:538687..538814Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:539461..539538TCONS_00065914-exon-scaffold_448-1491911889:539461..539538Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:539461..539538TCONS_00065914-exon-scaffold_448-1510915933:539461..539538Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:539461..539538TCONS_00065914-exon-scaffold_448-1575043694:539461..539538Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:541306..541318TCONS_00065914-exon-scaffold_448-1491911889:541306..541318Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:541306..541318TCONS_00065914-exon-scaffold_448-1510915933:541306..541318Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:541306..541318TCONS_00065914-exon-scaffold_448-1575043694:541306..541318Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1491911889:541579..541591TCONS_00065914-exon-scaffold_448-1491911889:541579..541591Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1510915933:541579..541591TCONS_00065914-exon-scaffold_448-1510915933:541579..541591Clytia hemisphaericaexon
TCONS_00065914-exon-scaffold_448-1575043694:541579..541591TCONS_00065914-exon-scaffold_448-1575043694:541579..541591Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:528670..541591 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.26626	10.0026	18.2904	9.68962	34.5633	20.9569	30.11	28.6476	19.0979	26.5857	19.4873	23.7767	17.2556	12.9245	26.7896	27.9232	21.7505	19.3567	14.2669	15.8753	0.000377538	2.14631	3.32703	6.79992	12.3887	4.17054	5.15575	3.57711	8.46153	11.8489
Blast
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BLAST of TCONS_00065914 vs. Swiss-Prot (Human)
Match: MP2K6 (Dual specificity mitogen-activated protein kinase kinase 6 OS=Homo sapiens GN=MAP2K6 PE=1 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 3.670e-108
Identity = 157/254 (61.81%), Postives = 196/254 (77.17%), Query Frame = 3 
Query:  210 KGEKKRP-LKIVMPPVHQTQPQPVNAP-RNLSDRTTLTVNSQDYPCSTDDLIEICELGRGAYGVVEKMRHKQTNIEMAVKRIRHTVNTTEQGRLLMDLDVSMRLSNYPYAIQFYGALFKEGDVWICMELMKTSFDKFYKKVAEQEGALIPEKVLGKISFAVVSALEYLHSKMKVIHRDVKPSNILVNDNGEIKLCDFGISGQLVDSLAKTLTAGCKPYMAPERINPTKGQHGYDIRSDVWSLGITMVELACLKF 965
            KG+K+ P LKI  P     QPQ  + P R+L  +  +++ +Q++    DDL  I ELGRGAYGVVEKMRH  +   MAVKRIR TVN+ EQ RLLMDLD+SMR  + P+ + FYGALF+EGDVWICMELM TS DKFYK+V ++ G  IPE +LGKI+ ++V ALE+LHSK+ VIHRDVKPSN+L+N  G++K+CDFGISG LVDS+AKT+ AGCKPYMAPERINP   Q GY ++SD+WSLGITM+ELA L+F
Sbjct:    5 KGKKRNPGLKI--PKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF 255
The following BLAST results are available for this feature:
BLAST of TCONS_00065914 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MP2K63.670e-10861.81Dual specificity mitogen-activated protein kinase ... [more]
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